Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:08:55 (4019986): wrapper (7.7.26015): starting
10:08:55 (4019986): wrapper: running run_atlas (--nthreads 4)
[2025-11-26 10:08:55] Arguments: --nthreads 4
[2025-11-26 10:08:55] Threads: 4
[2025-11-26 10:08:55] Checking for CVMFS
[2025-11-26 10:08:55] No cvmfs_config command found, will try listing directly
[2025-11-26 10:08:55] CVMFS is ok
[2025-11-26 10:08:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 10:08:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 10:08:55] Further information can be found at the LHC@home message board.
[2025-11-26 10:08:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 10:08:55] Checking for apptainer binary...
[2025-11-26 10:08:55] which: no apptainer in ((null))
[2025-11-26 10:08:55] apptainer is not installed, using version from CVMFS
[2025-11-26 10:08:55] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 10:08:56] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot116/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut10.grid.cesnet.cz
[2025-11-26 10:08:56] apptainer works
[2025-11-26 10:08:56] Set ATHENA_PROC_NUMBER=4
[2025-11-26 10:08:56] Set ATHENA_CORE_NUMBER=4
[2025-11-26 10:08:56] Starting ATLAS job with PandaID=6893853427
[2025-11-26 10:08:56] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot116/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 03:11:16]  *** The last 200 lines of the pilot log: ***
[2025-11-27 03:11:16] 2025-11-27 02:10:15,189 | INFO     | time since job start (61264s) is within the limit (172800.0s)
[2025-11-27 03:11:16] 2025-11-27 02:10:16,282 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 03:11:16] 2025-11-27 02:10:16,340 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2700.605164062499
[2025-11-27 03:11:16] 2025-11-27 02:10:16,371 | INFO     | using path: /scratch/boinc/var/slot116/slots/0/PanDA_Pilot-6893853427/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 03:11:16] 2025-11-27 02:10:16,372 | INFO     | extracted standard info from prmon json
[2025-11-27 03:11:16] 2025-11-27 02:10:16,373 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 03:11:16] 2025-11-27 02:10:16,373 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 03:11:16] 2025-11-27 02:10:16,388 | INFO     | fitting pss+swap vs Time
[2025-11-27 03:11:16] 2025-11-27 02:10:16,390 | INFO     | sum of square deviations: 313819116449.97974
[2025-11-27 03:11:16] 2025-11-27 02:10:16,414 | INFO     | sum of deviations: 870875128322.7385
[2025-11-27 03:11:16] 2025-11-27 02:10:16,414 | INFO     | mean x: 1764178778.5318725
[2025-11-27 03:11:16] 2025-11-27 02:10:16,415 | INFO     | mean y: 2268924.3675298803
[2025-11-27 03:11:16] 2025-11-27 02:10:16,415 | INFO     | intersect: -4893479421.106775
[2025-11-27 03:11:16] 2025-11-27 02:10:16,416 | INFO     | chi2: 5.09668289284381
[2025-11-27 03:11:16] 2025-11-27 02:10:16,417 | INFO     | sum of square deviations: 309153903854.9749
[2025-11-27 03:11:16] 2025-11-27 02:10:16,443 | INFO     | sum of deviations: 1109692482318.3762
[2025-11-27 03:11:16] 2025-11-27 02:10:16,443 | INFO     | mean x: 1764178626.032032
[2025-11-27 03:11:16] 2025-11-27 02:10:16,443 | INFO     | mean y: 2276725.5195195195
[2025-11-27 03:11:16] 2025-11-27 02:10:16,443 | INFO     | intersect: -6330154255.8239
[2025-11-27 03:11:16] 2025-11-27 02:10:16,444 | INFO     | chi2: 2.3171092597250604
[2025-11-27 03:11:16] 2025-11-27 02:10:16,444 | INFO     | current chi2=2.3171092597250604 (change=54.53691531449828 %)
[2025-11-27 03:11:16] 2025-11-27 02:10:16,445 | INFO     | sum of square deviations: 304535157247.46906
[2025-11-27 03:11:16] 2025-11-27 02:10:16,470 | INFO     | sum of deviations: 1123885094156.351
[2025-11-27 03:11:16] 2025-11-27 02:10:16,471 | INFO     | mean x: 1764178473.5321932
[2025-11-27 03:11:16] 2025-11-27 02:10:16,471 | INFO     | mean y: 2277190.9577464787
[2025-11-27 03:11:16] 2025-11-27 02:10:16,471 | INFO     | intersect: -6508412437.639527
[2025-11-27 03:11:16] 2025-11-27 02:10:16,472 | INFO     | chi2: 2.228553892061712
[2025-11-27 03:11:16] 2025-11-27 02:10:16,472 | INFO     | current chi2=2.228553892061712 (change=3.821803710449815 %)
[2025-11-27 03:11:16] 2025-11-27 02:10:16,472 | INFO     | right removable region: 993
[2025-11-27 03:11:16] 2025-11-27 02:10:16,474 | INFO     | sum of square deviations: 309153884334.9748
[2025-11-27 03:11:16] 2025-11-27 02:10:16,500 | INFO     | sum of deviations: 671913108983.0831
[2025-11-27 03:11:16] 2025-11-27 02:10:16,500 | INFO     | mean x: 1764178931.032032
[2025-11-27 03:11:16] 2025-11-27 02:10:16,501 | INFO     | mean y: 2275418.3723723725
[2025-11-27 03:11:16] 2025-11-27 02:10:16,501 | INFO     | intersect: -3831979981.3359685
[2025-11-27 03:11:16] 2025-11-27 02:10:16,502 | INFO     | chi2: 3.033920448907564
[2025-11-27 03:11:16] 2025-11-27 02:10:16,502 | INFO     | current chi2=3.033920448907564 (change=40.47264637226195 %)
[2025-11-27 03:11:16] 2025-11-27 02:10:16,503 | INFO     | sum of square deviations: 304535118207.4691
[2025-11-27 03:11:16] 2025-11-27 02:10:16,529 | INFO     | sum of deviations: 631251074687.7511
[2025-11-27 03:11:16] 2025-11-27 02:10:16,529 | INFO     | mean x: 1764179083.5321932
[2025-11-27 03:11:16] 2025-11-27 02:10:16,529 | INFO     | mean y: 2276760.6639839034
[2025-11-27 03:11:16] 2025-11-27 02:10:16,529 | INFO     | intersect: -3654575522.8308377
[2025-11-27 03:11:16] 2025-11-27 02:10:16,531 | INFO     | chi2: 2.9965149671225255
[2025-11-27 03:11:16] 2025-11-27 02:10:16,531 | INFO     | current chi2=2.9965149671225255 (change=1.232909115942951 %)
[2025-11-27 03:11:16] 2025-11-27 02:10:16,531 | INFO     | left removable region: 20
[2025-11-27 03:11:16] 2025-11-27 02:10:16,532 | INFO     | sum of square deviations: 285638503528.9477
[2025-11-27 03:11:16] 2025-11-27 02:10:16,557 | INFO     | sum of deviations: 822583042820.326
[2025-11-27 03:11:16] 2025-11-27 02:10:16,557 | INFO     | mean x: 1764179053.032888
[2025-11-27 03:11:16] 2025-11-27 02:10:16,557 | INFO     | mean y: 2287112.5210688594
[2025-11-27 03:11:16] 2025-11-27 02:10:16,557 | INFO     | intersect: -5078203632.231086
[2025-11-27 03:11:16] 2025-11-27 02:10:16,558 | INFO     | chi2: 0.08744627814035298
[2025-11-27 03:11:16] 2025-11-27 02:10:16,558 | INFO     | current memory leak: 2.88 B/s (using 973 data points, chi2=0.09)
[2025-11-27 03:11:16] 2025-11-27 02:10:16,560 | INFO     | could have reported an average CPU frequency of 2483 MHz (37 samples)
[2025-11-27 03:11:16] 2025-11-27 02:10:16,560 | INFO     | ..............................
[2025-11-27 03:11:16] 2025-11-27 02:10:16,560 | INFO     | . Timing measurements:
[2025-11-27 03:11:16] 2025-11-27 02:10:16,560 | INFO     | . get job = 0 s
[2025-11-27 03:11:16] 2025-11-27 02:10:16,561 | INFO     | . initial setup = 1 s
[2025-11-27 03:11:16] 2025-11-27 02:10:16,561 | INFO     | . payload setup = 10 s
[2025-11-27 03:11:16] 2025-11-27 02:10:16,561 | INFO     | . stage-in = 0 s
[2025-11-27 03:11:16] 2025-11-27 02:10:16,561 | INFO     | . payload execution = 61221 s
[2025-11-27 03:11:16] 2025-11-27 02:10:16,561 | INFO     | . stage-out = 2 s
[2025-11-27 03:11:16] 2025-11-27 02:10:16,561 | INFO     | . log creation = 0 s
[2025-11-27 03:11:16] 2025-11-27 02:10:16,561 | INFO     | ..............................
[2025-11-27 03:11:16] 2025-11-27 02:10:17,148 | INFO     | 
[2025-11-27 03:11:16] 2025-11-27 02:10:17,149 | INFO     | job summary report
[2025-11-27 03:11:16] 2025-11-27 02:10:17,149 | INFO     | --------------------------------------------------
[2025-11-27 03:11:16] 2025-11-27 02:10:17,149 | INFO     | PanDA job id: 6893853427
[2025-11-27 03:11:16] 2025-11-27 02:10:17,149 | INFO     | task id: 47523449
[2025-11-27 03:11:16] 2025-11-27 02:10:17,149 | INFO     | errors: (none)
[2025-11-27 03:11:16] 2025-11-27 02:10:17,149 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 03:11:16] 2025-11-27 02:10:17,150 | INFO     | pilot state: finished 
[2025-11-27 03:11:16] 2025-11-27 02:10:17,150 | INFO     | transexitcode: 0
[2025-11-27 03:11:16] 2025-11-27 02:10:17,150 | INFO     | exeerrorcode: 0
[2025-11-27 03:11:16] 2025-11-27 02:10:17,150 | INFO     | exeerrordiag: 
[2025-11-27 03:11:16] 2025-11-27 02:10:17,150 | INFO     | exitcode: 0
[2025-11-27 03:11:16] 2025-11-27 02:10:17,150 | INFO     | exitmsg: OK
[2025-11-27 03:11:16] 2025-11-27 02:10:17,150 | INFO     | cpuconsumptiontime: 242715 s
[2025-11-27 03:11:16] 2025-11-27 02:10:17,150 | INFO     | nevents: 1000
[2025-11-27 03:11:16] 2025-11-27 02:10:17,150 | INFO     | neventsw: 0
[2025-11-27 03:11:16] 2025-11-27 02:10:17,150 | INFO     | pid: 4044231
[2025-11-27 03:11:16] 2025-11-27 02:10:17,151 | INFO     | pgrp: 4044231
[2025-11-27 03:11:16] 2025-11-27 02:10:17,151 | INFO     | corecount: 4
[2025-11-27 03:11:16] 2025-11-27 02:10:17,151 | INFO     | event service: False
[2025-11-27 03:11:16] 2025-11-27 02:10:17,151 | INFO     | sizes: {0: 2284043, 1: 2284298, 8: 2284560, 12: 2284588, 61234: 2340014, 61235: 2340013, 61238: 2349215, 61240: 2349271, 61247: 2349517}
[2025-11-27 03:11:16] 2025-11-27 02:10:17,151 | INFO     | --------------------------------------------------
[2025-11-27 03:11:16] 2025-11-27 02:10:17,151 | INFO     | 
[2025-11-27 03:11:16] 2025-11-27 02:10:17,151 | INFO     | executing command: ls -lF /scratch/boinc/var/slot116/slots/0
[2025-11-27 03:11:16] 2025-11-27 02:10:17,180 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 03:11:16] 2025-11-27 02:10:17,180 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 03:11:16] 2025-11-27 02:10:17,181 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 03:11:16] 2025-11-27 02:10:17,181 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 03:11:16] 2025-11-27 02:10:17,181 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 03:11:16] 2025-11-27 02:10:17,181 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 03:11:16] 2025-11-27 02:10:17,181 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 03:11:16] 2025-11-27 02:10:17,181 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 03:11:16] 2025-11-27 02:10:17,181 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 03:11:16] 2025-11-27 02:10:17,182 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 03:11:16] 2025-11-27 02:10:17,182 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 03:11:16] 2025-11-27 02:10:17,182 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 03:11:16] 2025-11-27 02:10:17,182 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 03:11:16] 2025-11-27 02:10:17,182 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 03:11:16] 2025-11-27 02:10:17,182 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 03:11:16] 2025-11-27 02:10:17,182 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 03:11:16] 2025-11-27 02:10:17,182 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 03:11:16] 2025-11-27 02:10:17,182 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 03:11:16] 2025-11-27 02:10:17,183 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 03:11:16] 2025-11-27 02:10:17,183 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 03:11:16] 2025-11-27 02:10:17,183 | INFO     | job 6893853427 has completed (purged errors)
[2025-11-27 03:11:16] 2025-11-27 02:10:17,183 | INFO     | overall cleanup function is called
[2025-11-27 03:11:16] 2025-11-27 02:10:17,487 | INFO     | PID=4026149 has CPU usage=25.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-27 03:11:16] 2025-11-27 02:10:17,487 | INFO     | .. there are 5 such processes running
[2025-11-27 03:11:16] 2025-11-27 02:10:18,205 | INFO     | --- collectZombieJob: --- 10, [4044231]
[2025-11-27 03:11:16] 2025-11-27 02:10:18,206 | INFO     | zombie collector waiting for pid 4044231
[2025-11-27 03:11:16] 2025-11-27 02:10:18,206 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 03:11:16] 2025-11-27 02:10:18,206 | INFO     | collected zombie processes
[2025-11-27 03:11:16] 2025-11-27 02:10:18,206 | INFO     | will attempt to kill all subprocesses of pid=4044231
[2025-11-27 03:11:16] 2025-11-27 02:10:19,009 | INFO     | process IDs to be killed: [4044231] (in reverse order)
[2025-11-27 03:11:16] 2025-11-27 02:10:19,257 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 03:11:16] 2025-11-27 02:10:19,258 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 03:11:16] 2025-11-27 02:10:19,291 | INFO     | did not find any defunct processes belonging to 4044231
[2025-11-27 03:11:16] 2025-11-27 02:10:19,324 | INFO     | did not find any defunct processes belonging to 4044231
[2025-11-27 03:11:16] 2025-11-27 02:10:19,325 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 03:11:16] 2025-11-27 02:10:19,325 | INFO     | ready for new job
[2025-11-27 03:11:16] 2025-11-27 02:10:19,326 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 03:11:16] 2025-11-27 02:10:19,332 | INFO     | ***************************************
[2025-11-27 03:11:16] 2025-11-27 02:10:19,332 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 03:11:16] 2025-11-27 02:10:19,332 | INFO     | ***************************************
[2025-11-27 03:11:16] 2025-11-27 02:10:19,332 | INFO     | 
[2025-11-27 03:11:16] 2025-11-27 02:10:19,341 | INFO     | architecture information:
[2025-11-27 03:11:16] 2025-11-27 02:10:19,341 | INFO     | executing command: cat /etc/os-release
[2025-11-27 03:11:16] 2025-11-27 02:10:19,363 | INFO     | cat /etc/os-release:
[2025-11-27 03:11:16] NAME="CentOS Linux"
[2025-11-27 03:11:16] VERSION="7 (Core)"
[2025-11-27 03:11:16] ID="centos"
[2025-11-27 03:11:16] ID_LIKE="rhel fedora"
[2025-11-27 03:11:16] VERSION_ID="7"
[2025-11-27 03:11:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 03:11:16] ANSI_COLOR="0;31"
[2025-11-27 03:11:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 03:11:16] HOME_URL="https://www.centos.org/"
[2025-11-27 03:11:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 03:11:16] 
[2025-11-27 03:11:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 03:11:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 03:11:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 03:11:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 03:11:16] 
[2025-11-27 03:11:16] 2025-11-27 02:10:19,363 | INFO     | ***************************************
[2025-11-27 03:11:16] 2025-11-27 02:10:19,866 | INFO     | executing command: df -mP /scratch/boinc/var/slot116/slots/0
[2025-11-27 03:11:16] 2025-11-27 02:10:19,889 | INFO     | sufficient remaining disk space (3292592603136 B)
[2025-11-27 03:11:16] 2025-11-27 02:10:19,889 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 03:11:16] 2025-11-27 02:10:19,889 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 03:11:16] 2025-11-27 02:10:19,890 | INFO     | update_server=False
[2025-11-27 03:11:16] 2025-11-27 02:10:19,890 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 03:11:16] 2025-11-27 02:10:19,890 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 03:11:16] 2025-11-27 02:10:20,097 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 03:11:16] 2025-11-27 02:10:20,097 | INFO     | aborting loop
[2025-11-27 03:11:16] 2025-11-27 02:10:20,695 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 03:11:16] 2025-11-27 02:10:20,895 | INFO     | [job] retrieve thread has finished
[2025-11-27 03:11:16] 2025-11-27 02:10:20,940 | INFO     | all data control threads have been joined
[2025-11-27 03:11:16] 2025-11-27 02:10:20,993 | INFO     | all payload control threads have been joined
[2025-11-27 03:11:16] 2025-11-27 02:10:21,100 | INFO     | [job] job monitor thread has finished
[2025-11-27 03:11:16] 2025-11-27 02:10:21,368 | INFO     | all job control threads have been joined
[2025-11-27 03:11:16] 2025-11-27 02:10:21,380 | INFO     | [payload] failed_post thread has finished
[2025-11-27 03:11:16] 2025-11-27 02:10:21,552 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 03:11:16] 2025-11-27 02:10:21,636 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 03:11:16] 2025-11-27 02:10:21,671 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 03:11:16] 2025-11-27 02:10:21,673 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 03:11:16] 2025-11-27 02:10:21,714 | INFO     | [payload] validate_post thread has finished
[2025-11-27 03:11:16] 2025-11-27 02:10:21,816 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 03:11:16] 2025-11-27 02:10:21,945 | INFO     | [data] control thread has finished
[2025-11-27 03:11:16] 2025-11-27 02:10:21,996 | INFO     | [payload] control thread has finished
[2025-11-27 03:11:16] 2025-11-27 02:10:22,171 | INFO     | [data] copytool_in thread has finished
[2025-11-27 03:11:16] 2025-11-27 02:10:22,318 | INFO     | [job] validate thread has finished
[2025-11-27 03:11:16] 2025-11-27 02:10:22,374 | INFO     | [job] control thread has finished
[2025-11-27 03:11:16] 2025-11-27 02:10:22,676 | INFO     | [job] queue monitor thread has finished
[2025-11-27 03:11:16] 2025-11-27 02:10:22,700 | INFO     | [data] copytool_out thread has finished
[2025-11-27 03:11:16] 2025-11-27 02:10:23,895 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 03:11:16] 2025-11-27 02:10:50,555 | INFO     | PID=4026149 has CPU usage=5.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 03:11:16] 2025-11-27 02:10:50,555 | INFO     | .. there are 5 such processes running
[2025-11-27 03:11:16] 2025-11-27 02:10:50,555 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 03:11:16] 2025-11-27 02:10:50,555 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 03:11:16] 2025-11-27 02:10:50,556 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 03:11:16] 2025-11-27 02:10:50,973 | INFO     | [monitor] cgroup control has ended
[2025-11-27 03:11:16] 2025-11-27 02:10:52,244 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23179590858560)>', '<ExcThread(monitor, started 23179353360128)>']
[2025-11-27 03:11:16] 2025-11-27 02:10:52,565 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 03:11:16] 2025-11-27 02:10:52,566 | INFO     | [monitor] control thread has ended
[2025-11-27 03:11:16] 2025-11-27 02:10:57,269 | INFO     | all workflow threads have been joined
[2025-11-27 03:11:16] 2025-11-27 02:10:57,270 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 03:11:16] 2025-11-27 02:10:57,270 | INFO     | traces error code: 0
[2025-11-27 03:11:16] 2025-11-27 02:10:57,270 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 03:11:16] 2025-11-27 02:10:57,426 [wrapper] ==== pilot stdout END ====
[2025-11-27 03:11:16] 2025-11-27 02:10:57,432 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 03:11:16] 2025-11-27 02:10:57,436 [wrapper] pilotpid: 4026149
[2025-11-27 03:11:16] 2025-11-27 02:10:57,439 [wrapper] Pilot exit status: 0
[2025-11-27 03:11:16] 2025-11-27 02:10:57,454 [wrapper] pandaids: 6893853427
[2025-11-27 03:11:16] 2025-11-27 02:10:57,629 [wrapper] cleanup supervisor_pilot 1144335 4026150
[2025-11-27 03:11:16] 2025-11-27 02:10:57,633 [wrapper] Test setup, not cleaning
[2025-11-27 03:11:16] 2025-11-27 02:10:57,637 [wrapper] apfmon messages muted
[2025-11-27 03:11:16] 2025-11-27 02:10:57,641 [wrapper] ==== wrapper stdout END ====
[2025-11-27 03:11:16] 2025-11-27 02:10:57,645 [wrapper] ==== wrapper stderr END ====
[2025-11-27 03:11:16]  *** Error codes and diagnostics ***
[2025-11-27 03:11:16]     "exeErrorCode": 0,
[2025-11-27 03:11:16]     "exeErrorDiag": "",
[2025-11-27 03:11:16]     "pilotErrorCode": 0,
[2025-11-27 03:11:16]     "pilotErrorDiag": "",
[2025-11-27 03:11:16]  *** Listing of results directory ***
[2025-11-27 03:11:16] total 1312692
[2025-11-27 03:11:16] -rw-r--r-- 1 boinc boinc    576529 Nov 20 13:07 pilot3.tar.gz
[2025-11-27 03:11:16] -rwx------ 1 boinc boinc     36292 Nov 20 13:18 runpilot2-wrapper.sh
[2025-11-27 03:11:16] -rw-r--r-- 1 boinc boinc      5112 Nov 20 13:18 queuedata.json
[2025-11-27 03:11:16] -rw-r--r-- 1 boinc boinc       100 Nov 26 10:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 03:11:16] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 10:08 run_atlas
[2025-11-27 03:11:16] -rw-r--r-- 1 boinc boinc       105 Nov 26 10:08 job.xml
[2025-11-27 03:11:16] -rw-r--r-- 1 boinc boinc      6687 Nov 26 10:08 init_data.xml
[2025-11-27 03:11:16] -rw-r--r-- 2 boinc boinc 409602656 Nov 26 10:08 EVNT.47493127._000414.pool.root.1
[2025-11-27 03:11:16] -rw-r--r-- 2 boinc boinc     15847 Nov 26 10:08 start_atlas.sh
[2025-11-27 03:11:16] drwxrwx--x 2 boinc boinc      4096 Nov 26 10:08 shared
[2025-11-27 03:11:16] -rw-r--r-- 2 boinc boinc    590101 Nov 26 10:08 input.tar.gz
[2025-11-27 03:11:16] -rw-r--r-- 1 boinc boinc         0 Nov 26 10:08 boinc_lockfile
[2025-11-27 03:11:16] -rw-r--r-- 1 boinc boinc      2782 Nov 26 10:08 pandaJob.out
[2025-11-27 03:11:16] -rw------- 1 boinc boinc    991877 Nov 26 10:09 agis_schedconf.cvmfs.json
[2025-11-27 03:11:16] drwx------ 5 boinc boinc      4096 Nov 26 10:09 pilot3
[2025-11-27 03:11:16] -rw-r--r-- 1 boinc boinc       532 Nov 27 03:02 boinc_task_state.xml
[2025-11-27 03:11:16] -rw------- 1 boinc boinc 910501914 Nov 27 03:09 HITS.47523449._004131.pool.root.1
[2025-11-27 03:11:16] -rw------- 1 boinc boinc        95 Nov 27 03:09 pilot_heartbeat.json
[2025-11-27 03:11:16] -rw------- 1 boinc boinc      1041 Nov 27 03:10 memory_monitor_summary.json
[2025-11-27 03:11:16] -rw------- 1 boinc boinc   1516240 Nov 27 03:10 agis_ddmendpoints.agis.ALL.json
[2025-11-27 03:11:16] -rw------- 1 boinc boinc   1733580 Nov 27 03:10 log.47523449._004131.job.log.tgz.1
[2025-11-27 03:11:16] -rw------- 1 boinc boinc      8591 Nov 27 03:10 heartbeat.json
[2025-11-27 03:11:16] -rw------- 1 boinc boinc      4835 Nov 27 03:10 pilotlog.txt
[2025-11-27 03:11:16] -rw------- 1 boinc boinc   8349410 Nov 27 03:10 log.47523449._004131.job.log.1
[2025-11-27 03:11:16] -rw------- 1 boinc boinc       353 Nov 27 03:10 output.list
[2025-11-27 03:11:16] -rw-r--r-- 1 boinc boinc       620 Nov 27 03:10 runtime_log
[2025-11-27 03:11:16] -rw------- 1 boinc boinc  10106880 Nov 27 03:10 result.tar.gz
[2025-11-27 03:11:16] -rw------- 1 boinc boinc       670 Nov 27 03:10 wbUNDmenIg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmqbGKDmoZUXan.diag
[2025-11-27 03:11:16] -rw-r--r-- 1 boinc boinc      9223 Nov 27 03:10 runtime_log.err
[2025-11-27 03:11:16] -rw-r--r-- 1 boinc boinc        28 Nov 27 03:11 wrapper_checkpoint.txt
[2025-11-27 03:11:16] -rw-r--r-- 1 boinc boinc      8192 Nov 27 03:11 boinc_mmap_file
[2025-11-27 03:11:16] -rw-r--r-- 1 boinc boinc     21201 Nov 27 03:11 stderr.txt
[2025-11-27 03:11:16] HITS file was successfully produced:
[2025-11-27 03:11:16] -rw------- 1 boinc boinc 910501914 Nov 27 03:09 shared/HITS.pool.root.1
[2025-11-27 03:11:16]  *** Contents of shared directory: ***
[2025-11-27 03:11:16] total 1299644
[2025-11-27 03:11:16] -rw-r--r-- 2 boinc boinc 409602656 Nov 26 10:08 ATLAS.root_0
[2025-11-27 03:11:16] -rw-r--r-- 2 boinc boinc     15847 Nov 26 10:08 start_atlas.sh
[2025-11-27 03:11:16] -rw-r--r-- 2 boinc boinc    590101 Nov 26 10:08 input.tar.gz
[2025-11-27 03:11:16] -rw------- 1 boinc boinc 910501914 Nov 27 03:09 HITS.pool.root.1
[2025-11-27 03:11:16] -rw------- 1 boinc boinc  10106880 Nov 27 03:10 result.tar.gz
03:11:17 (4019986): run_atlas exited; CPU time 246450.829020
03:11:17 (4019986): called boinc_finish(0)

</stderr_txt>
]]>

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