Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:56:00 (809655): wrapper (7.7.26015): starting
11:56:00 (809655): wrapper: running run_atlas (--nthreads 4)
[2025-11-23 11:56:00] Arguments: --nthreads 4
[2025-11-23 11:56:00] Threads: 4
[2025-11-23 11:56:00] Checking for CVMFS
[2025-11-23 11:56:00] No cvmfs_config command found, will try listing directly
[2025-11-23 11:56:00] CVMFS is ok
[2025-11-23 11:56:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 11:56:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 11:56:00] Further information can be found at the LHC@home message board.
[2025-11-23 11:56:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 11:56:00] Checking for apptainer binary...
[2025-11-23 11:56:00] which: no apptainer in ((null))
[2025-11-23 11:56:00] apptainer is not installed, using version from CVMFS
[2025-11-23 11:56:00] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 11:56:00] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot100/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2025-11-23 11:56:00] apptainer works
[2025-11-23 11:56:00] Set ATHENA_PROC_NUMBER=4
[2025-11-23 11:56:00] Set ATHENA_CORE_NUMBER=4
[2025-11-23 11:56:00] Starting ATLAS job with PandaID=6893862645
[2025-11-23 11:56:00] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot100/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 04:27:40]  *** The last 200 lines of the pilot log: ***
[2025-11-24 04:27:40] 2025-11-24 03:26:12,545 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 04:27:40] 2025-11-24 03:26:12,602 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2729.2983828124993
[2025-11-24 04:27:40] 2025-11-24 03:26:12,634 | INFO     | using path: /scratch/boinc/var/slot100/slots/0/PanDA_Pilot-6893862645/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 04:27:40] 2025-11-24 03:26:12,635 | INFO     | extracted standard info from prmon json
[2025-11-24 04:27:40] 2025-11-24 03:26:12,635 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 04:27:40] 2025-11-24 03:26:12,635 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 04:27:40] 2025-11-24 03:26:12,651 | INFO     | fitting pss+swap vs Time
[2025-11-24 04:27:40] 2025-11-24 03:26:12,652 | INFO     | sum of square deviations: 285634150279.8771
[2025-11-24 04:27:40] 2025-11-24 03:26:12,674 | INFO     | sum of deviations: 894201595765.8824
[2025-11-24 04:27:40] 2025-11-24 03:26:12,675 | INFO     | mean x: 1763925058.1161356
[2025-11-24 04:27:40] 2025-11-24 03:26:12,675 | INFO     | mean y: 2269527.16032888
[2025-11-24 04:27:40] 2025-11-24 03:26:12,675 | INFO     | intersect: -5519845388.8375025
[2025-11-24 04:27:40] 2025-11-24 03:26:12,676 | INFO     | chi2: 3.7000635303906177
[2025-11-24 04:27:40] 2025-11-24 03:26:12,677 | INFO     | sum of square deviations: 281253302604.80774
[2025-11-24 04:27:40] 2025-11-24 03:26:12,698 | INFO     | sum of deviations: 1055669128643.506
[2025-11-24 04:27:40] 2025-11-24 03:26:12,699 | INFO     | mean x: 1763924905.6167355
[2025-11-24 04:27:40] 2025-11-24 03:26:12,699 | INFO     | mean y: 2275140.6725206613
[2025-11-24 04:27:40] 2025-11-24 03:26:12,699 | INFO     | intersect: -6618522022.806429
[2025-11-24 04:27:40] 2025-11-24 03:26:12,700 | INFO     | chi2: 1.9867420035786159
[2025-11-24 04:27:40] 2025-11-24 03:26:12,700 | INFO     | current chi2=1.9867420035786159 (change=46.30519213358279 %)
[2025-11-24 04:27:40] 2025-11-24 03:26:12,701 | INFO     | sum of square deviations: 276917479029.7402
[2025-11-24 04:27:40] 2025-11-24 03:26:12,723 | INFO     | sum of deviations: 1043229008245.3314
[2025-11-24 04:27:40] 2025-11-24 03:26:12,723 | INFO     | mean x: 1763924753.1173418
[2025-11-24 04:27:40] 2025-11-24 03:26:12,723 | INFO     | mean y: 2274703.1298026997
[2025-11-24 04:27:40] 2025-11-24 03:26:12,723 | INFO     | intersect: -6642944938.698461
[2025-11-24 04:27:40] 2025-11-24 03:26:12,724 | INFO     | chi2: 1.9864391013221359
[2025-11-24 04:27:40] 2025-11-24 03:26:12,725 | INFO     | current chi2=1.9864391013221359 (change=0.01524617972209756 %)
[2025-11-24 04:27:40] 2025-11-24 03:26:12,725 | INFO     | right removable region: 962
[2025-11-24 04:27:40] 2025-11-24 03:26:12,726 | INFO     | sum of square deviations: 281253233674.808
[2025-11-24 04:27:40] 2025-11-24 03:26:12,747 | INFO     | sum of deviations: 716341949864.3606
[2025-11-24 04:27:40] 2025-11-24 03:26:12,747 | INFO     | mean x: 1763925210.6167355
[2025-11-24 04:27:40] 2025-11-24 03:26:12,747 | INFO     | mean y: 2275707.6074380167
[2025-11-24 04:27:40] 2025-11-24 03:26:12,747 | INFO     | intersect: -4490378859.518608
[2025-11-24 04:27:40] 2025-11-24 03:26:12,748 | INFO     | chi2: 1.8354212817346167
[2025-11-24 04:27:40] 2025-11-24 03:26:12,748 | INFO     | current chi2=1.8354212817346167 (change=50.39487115128398 %)
[2025-11-24 04:27:40] 2025-11-24 03:26:12,749 | INFO     | sum of square deviations: 276917459142.20056
[2025-11-24 04:27:40] 2025-11-24 03:26:12,771 | INFO     | sum of deviations: 692154813607.321
[2025-11-24 04:27:40] 2025-11-24 03:26:12,772 | INFO     | mean x: 1763925363.115265
[2025-11-24 04:27:40] 2025-11-24 03:26:12,772 | INFO     | mean y: 2276558.1142263757
[2025-11-24 04:27:40] 2025-11-24 03:26:12,772 | INFO     | intersect: -4406652494.991523
[2025-11-24 04:27:40] 2025-11-24 03:26:12,773 | INFO     | chi2: 1.828278803611812
[2025-11-24 04:27:40] 2025-11-24 03:26:12,773 | INFO     | current chi2=1.828278803611812 (change=0.3891465242276401 %)
[2025-11-24 04:27:40] 2025-11-24 03:26:12,773 | INFO     | left removable region: 20
[2025-11-24 04:27:40] 2025-11-24 03:26:12,774 | INFO     | sum of square deviations: 259193567141.5723
[2025-11-24 04:27:40] 2025-11-24 03:26:12,795 | INFO     | sum of deviations: 792363498051.7767
[2025-11-24 04:27:40] 2025-11-24 03:26:12,795 | INFO     | mean x: 1763925332.6125267
[2025-11-24 04:27:40] 2025-11-24 03:26:12,795 | INFO     | mean y: 2283516.9171974524
[2025-11-24 04:27:40] 2025-11-24 03:26:12,795 | INFO     | intersect: -5390095862.959904
[2025-11-24 04:27:40] 2025-11-24 03:26:12,796 | INFO     | chi2: 0.09271640843262627
[2025-11-24 04:27:40] 2025-11-24 03:26:12,796 | INFO     | current memory leak: 3.06 B/s (using 942 data points, chi2=0.09)
[2025-11-24 04:27:40] 2025-11-24 03:26:12,798 | INFO     | could have reported an average CPU frequency of 2681 MHz (36 samples)
[2025-11-24 04:27:40] 2025-11-24 03:26:12,798 | INFO     | ..............................
[2025-11-24 04:27:40] 2025-11-24 03:26:12,798 | INFO     | . Timing measurements:
[2025-11-24 04:27:40] 2025-11-24 03:26:12,798 | INFO     | . get job = 0 s
[2025-11-24 04:27:40] 2025-11-24 03:26:12,798 | INFO     | . initial setup = 1 s
[2025-11-24 04:27:40] 2025-11-24 03:26:12,798 | INFO     | . payload setup = 9 s
[2025-11-24 04:27:40] 2025-11-24 03:26:12,798 | INFO     | . stage-in = 0 s
[2025-11-24 04:27:40] 2025-11-24 03:26:12,799 | INFO     | . payload execution = 59352 s
[2025-11-24 04:27:40] 2025-11-24 03:26:12,799 | INFO     | . stage-out = 2 s
[2025-11-24 04:27:40] 2025-11-24 03:26:12,799 | INFO     | . log creation = 0 s
[2025-11-24 04:27:40] 2025-11-24 03:26:12,799 | INFO     | ..............................
[2025-11-24 04:27:40] 2025-11-24 03:26:12,900 | INFO     | 
[2025-11-24 04:27:40] 2025-11-24 03:26:12,901 | INFO     | job summary report
[2025-11-24 04:27:40] 2025-11-24 03:26:12,901 | INFO     | --------------------------------------------------
[2025-11-24 04:27:40] 2025-11-24 03:26:12,901 | INFO     | PanDA job id: 6893862645
[2025-11-24 04:27:40] 2025-11-24 03:26:12,901 | INFO     | task id: 47523449
[2025-11-24 04:27:40] 2025-11-24 03:26:12,901 | INFO     | errors: (none)
[2025-11-24 04:27:40] 2025-11-24 03:26:12,902 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 04:27:40] 2025-11-24 03:26:12,902 | INFO     | pilot state: finished 
[2025-11-24 04:27:40] 2025-11-24 03:26:12,902 | INFO     | transexitcode: 0
[2025-11-24 04:27:40] 2025-11-24 03:26:12,902 | INFO     | exeerrorcode: 0
[2025-11-24 04:27:40] 2025-11-24 03:26:12,902 | INFO     | exeerrordiag: 
[2025-11-24 04:27:40] 2025-11-24 03:26:12,902 | INFO     | exitcode: 0
[2025-11-24 04:27:40] 2025-11-24 03:26:12,902 | INFO     | exitmsg: OK
[2025-11-24 04:27:40] 2025-11-24 03:26:12,902 | INFO     | cpuconsumptiontime: 227293 s
[2025-11-24 04:27:40] 2025-11-24 03:26:12,902 | INFO     | nevents: 1000
[2025-11-24 04:27:40] 2025-11-24 03:26:12,902 | INFO     | neventsw: 0
[2025-11-24 04:27:40] 2025-11-24 03:26:12,903 | INFO     | pid: 821569
[2025-11-24 04:27:40] 2025-11-24 03:26:12,903 | INFO     | pgrp: 821569
[2025-11-24 04:27:40] 2025-11-24 03:26:12,903 | INFO     | corecount: 4
[2025-11-24 04:27:40] 2025-11-24 03:26:12,903 | INFO     | event service: False
[2025-11-24 04:27:40] 2025-11-24 03:26:12,903 | INFO     | sizes: {0: 2298819, 1: 2298819, 7: 2299109, 11: 2299137, 59365: 2352412, 59367: 2361430, 59370: 2361614, 59378: 2361860}
[2025-11-24 04:27:40] 2025-11-24 03:26:12,903 | INFO     | --------------------------------------------------
[2025-11-24 04:27:40] 2025-11-24 03:26:12,903 | INFO     | 
[2025-11-24 04:27:40] 2025-11-24 03:26:12,903 | INFO     | executing command: ls -lF /scratch/boinc/var/slot100/slots/0
[2025-11-24 04:27:40] 2025-11-24 03:26:12,935 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 04:27:40] 2025-11-24 03:26:12,936 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 04:27:40] 2025-11-24 03:26:12,936 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 04:27:40] 2025-11-24 03:26:12,936 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 04:27:40] 2025-11-24 03:26:12,936 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 04:27:40] 2025-11-24 03:26:12,936 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 04:27:40] 2025-11-24 03:26:12,937 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 04:27:40] 2025-11-24 03:26:12,937 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 04:27:40] 2025-11-24 03:26:12,937 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 04:27:40] 2025-11-24 03:26:12,937 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 04:27:40] 2025-11-24 03:26:12,937 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 04:27:40] 2025-11-24 03:26:12,937 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 04:27:40] 2025-11-24 03:26:12,937 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 04:27:40] 2025-11-24 03:26:12,937 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 04:27:40] 2025-11-24 03:26:12,937 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 04:27:40] 2025-11-24 03:26:12,937 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 04:27:40] 2025-11-24 03:26:12,938 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 04:27:40] 2025-11-24 03:26:12,938 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 04:27:40] 2025-11-24 03:26:12,938 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 04:27:40] 2025-11-24 03:26:12,938 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 04:27:40] 2025-11-24 03:26:12,938 | INFO     | job 6893862645 has completed (purged errors)
[2025-11-24 04:27:40] 2025-11-24 03:26:12,938 | INFO     | overall cleanup function is called
[2025-11-24 04:27:40] 2025-11-24 03:26:13,166 | INFO     | PID=814055 has CPU usage=20.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 04:27:40] 2025-11-24 03:26:13,166 | INFO     | .. there are 9 such processes running
[2025-11-24 04:27:40] 2025-11-24 03:26:13,963 | INFO     | --- collectZombieJob: --- 10, [821569]
[2025-11-24 04:27:40] 2025-11-24 03:26:13,964 | INFO     | zombie collector waiting for pid 821569
[2025-11-24 04:27:40] 2025-11-24 03:26:13,964 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 04:27:40] 2025-11-24 03:26:13,964 | INFO     | collected zombie processes
[2025-11-24 04:27:40] 2025-11-24 03:26:13,964 | INFO     | will attempt to kill all subprocesses of pid=821569
[2025-11-24 04:27:40] 2025-11-24 03:26:14,745 | INFO     | process IDs to be killed: [821569] (in reverse order)
[2025-11-24 04:27:40] 2025-11-24 03:26:14,995 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 04:27:40] 2025-11-24 03:26:14,996 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 04:27:40] 2025-11-24 03:26:15,025 | INFO     | did not find any defunct processes belonging to 821569
[2025-11-24 04:27:40] 2025-11-24 03:26:15,051 | INFO     | did not find any defunct processes belonging to 821569
[2025-11-24 04:27:40] 2025-11-24 03:26:15,053 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 04:27:40] 2025-11-24 03:26:15,053 | INFO     | ready for new job
[2025-11-24 04:27:40] 2025-11-24 03:26:15,053 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 04:27:40] 2025-11-24 03:26:15,060 | INFO     | ***************************************
[2025-11-24 04:27:40] 2025-11-24 03:26:15,060 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 04:27:40] 2025-11-24 03:26:15,060 | INFO     | ***************************************
[2025-11-24 04:27:40] 2025-11-24 03:26:15,060 | INFO     | 
[2025-11-24 04:27:40] 2025-11-24 03:26:15,067 | INFO     | architecture information:
[2025-11-24 04:27:40] 2025-11-24 03:26:15,068 | INFO     | executing command: cat /etc/os-release
[2025-11-24 04:27:40] 2025-11-24 03:26:15,091 | INFO     | cat /etc/os-release:
[2025-11-24 04:27:40] NAME="CentOS Linux"
[2025-11-24 04:27:40] VERSION="7 (Core)"
[2025-11-24 04:27:40] ID="centos"
[2025-11-24 04:27:40] ID_LIKE="rhel fedora"
[2025-11-24 04:27:40] VERSION_ID="7"
[2025-11-24 04:27:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 04:27:40] ANSI_COLOR="0;31"
[2025-11-24 04:27:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 04:27:40] HOME_URL="https://www.centos.org/"
[2025-11-24 04:27:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 04:27:40] 
[2025-11-24 04:27:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 04:27:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 04:27:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 04:27:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 04:27:40] 
[2025-11-24 04:27:40] 2025-11-24 03:26:15,091 | INFO     | ***************************************
[2025-11-24 04:27:40] 2025-11-24 03:26:15,594 | INFO     | executing command: df -mP /scratch/boinc/var/slot100/slots/0
[2025-11-24 04:27:40] 2025-11-24 03:26:15,621 | INFO     | sufficient remaining disk space (3322291421184 B)
[2025-11-24 04:27:40] 2025-11-24 03:26:15,622 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 04:27:40] 2025-11-24 03:26:15,622 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 04:27:40] 2025-11-24 03:26:15,622 | INFO     | update_server=False
[2025-11-24 04:27:40] 2025-11-24 03:26:15,622 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 04:27:40] 2025-11-24 03:26:15,623 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 04:27:40] 2025-11-24 03:26:15,623 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 04:27:40] 2025-11-24 03:26:15,624 | INFO     | aborting loop
[2025-11-24 04:27:40] 2025-11-24 03:26:15,623 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 04:27:40] 2025-11-24 03:26:15,816 | INFO     | all data control threads have been joined
[2025-11-24 04:27:40] 2025-11-24 03:26:16,625 | INFO     | [job] job monitor thread has finished
[2025-11-24 04:27:40] 2025-11-24 03:26:16,628 | INFO     | [job] retrieve thread has finished
[2025-11-24 04:27:40] 2025-11-24 03:26:16,819 | INFO     | [data] control thread has finished
[2025-11-24 04:27:40] 2025-11-24 03:26:16,860 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 04:27:40] 2025-11-24 03:26:16,875 | INFO     | [payload] failed_post thread has finished
[2025-11-24 04:27:40] 2025-11-24 03:26:17,087 | INFO     | all payload control threads have been joined
[2025-11-24 04:27:40] 2025-11-24 03:26:17,122 | INFO     | all job control threads have been joined
[2025-11-24 04:27:40] 2025-11-24 03:26:17,303 | INFO     | [data] copytool_in thread has finished
[2025-11-24 04:27:40] 2025-11-24 03:26:17,434 | INFO     | [job] validate thread has finished
[2025-11-24 04:27:40] 2025-11-24 03:26:17,524 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 04:27:40] 2025-11-24 03:26:17,628 | INFO     | [data] copytool_out thread has finished
[2025-11-24 04:27:40] 2025-11-24 03:26:17,685 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 04:27:40] 2025-11-24 03:26:17,833 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 04:27:40] 2025-11-24 03:26:17,911 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 04:27:40] 2025-11-24 03:26:18,053 | INFO     | [payload] validate_post thread has finished
[2025-11-24 04:27:40] 2025-11-24 03:26:18,092 | INFO     | [payload] control thread has finished
[2025-11-24 04:27:40] 2025-11-24 03:26:18,127 | INFO     | [job] control thread has finished
[2025-11-24 04:27:40] 2025-11-24 03:26:18,156 [wrapper] supervise_pilot (15 min periods counter: 67)
[2025-11-24 04:27:40] 2025-11-24 03:26:18,917 | INFO     | [job] queue monitor thread has finished
[2025-11-24 04:27:40] 2025-11-24 03:26:19,630 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 04:27:40] 2025-11-24 03:26:46,256 | INFO     | PID=814055 has CPU usage=6.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-24 04:27:40] 2025-11-24 03:26:46,256 | INFO     | .. there are 9 such processes running
[2025-11-24 04:27:40] 2025-11-24 03:26:46,256 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 04:27:40] 2025-11-24 03:26:46,257 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 04:27:40] 2025-11-24 03:26:46,257 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 04:27:40] 2025-11-24 03:26:55,193 | INFO     | [monitor] cgroup control has ended
[2025-11-24 04:27:40] 2025-11-24 03:26:56,750 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22727599384384)>', '<ExcThread(monitor, started 22727364679424)>']
[2025-11-24 04:27:40] 2025-11-24 03:26:57,311 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 04:27:40] 2025-11-24 03:26:57,311 | INFO     | [monitor] control thread has ended
[2025-11-24 04:27:40] 2025-11-24 03:27:01,773 | INFO     | all workflow threads have been joined
[2025-11-24 04:27:40] 2025-11-24 03:27:01,773 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 04:27:40] 2025-11-24 03:27:01,774 | INFO     | traces error code: 0
[2025-11-24 04:27:40] 2025-11-24 03:27:01,774 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 04:27:40] 2025-11-24 03:27:01,934 [wrapper] ==== pilot stdout END ====
[2025-11-24 04:27:40] 2025-11-24 03:27:01,939 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 04:27:40] 2025-11-24 03:27:01,942 [wrapper] pilotpid: 814055
[2025-11-24 04:27:40] 2025-11-24 03:27:01,946 [wrapper] Pilot exit status: 0
[2025-11-24 04:27:40] 2025-11-24 03:27:01,959 [wrapper] pandaids: 6893862645
[2025-11-24 04:27:40] 2025-11-24 03:27:02,130 [wrapper] cleanup supervisor_pilot 2530665 814056
[2025-11-24 04:27:40] 2025-11-24 03:27:02,134 [wrapper] Test setup, not cleaning
[2025-11-24 04:27:40] 2025-11-24 03:27:02,137 [wrapper] apfmon messages muted
[2025-11-24 04:27:40] 2025-11-24 03:27:02,141 [wrapper] ==== wrapper stdout END ====
[2025-11-24 04:27:40] 2025-11-24 03:27:02,145 [wrapper] ==== wrapper stderr END ====
[2025-11-24 04:27:40]  *** Error codes and diagnostics ***
[2025-11-24 04:27:40]     "exeErrorCode": 0,
[2025-11-24 04:27:40]     "exeErrorDiag": "",
[2025-11-24 04:27:40]     "pilotErrorCode": 0,
[2025-11-24 04:27:40]     "pilotErrorDiag": "",
[2025-11-24 04:27:40]  *** Listing of results directory ***
[2025-11-24 04:27:40] total 1324908
[2025-11-24 04:27:40] -rw-r--r-- 1 boinc boinc    576529 Nov 20 15:06 pilot3.tar.gz
[2025-11-24 04:27:40] -rw-r--r-- 1 boinc boinc      5112 Nov 20 15:20 queuedata.json
[2025-11-24 04:27:40] -rwx------ 1 boinc boinc     36292 Nov 20 15:21 runpilot2-wrapper.sh
[2025-11-24 04:27:40] -rw-r--r-- 1 boinc boinc       100 Nov 23 11:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 04:27:40] -rwxr-xr-x 1 boinc boinc      7986 Nov 23 11:55 run_atlas
[2025-11-24 04:27:40] -rw-r--r-- 1 boinc boinc       105 Nov 23 11:55 job.xml
[2025-11-24 04:27:40] -rw-r--r-- 2 boinc boinc 408768262 Nov 23 11:56 EVNT.47493127._000598.pool.root.1
[2025-11-24 04:27:40] -rw-r--r-- 1 boinc boinc      6686 Nov 23 11:56 init_data.xml
[2025-11-24 04:27:40] -rw-r--r-- 2 boinc boinc     15847 Nov 23 11:56 start_atlas.sh
[2025-11-24 04:27:40] drwxrwx--x 2 boinc boinc      4096 Nov 23 11:56 shared
[2025-11-24 04:27:40] -rw-r--r-- 2 boinc boinc    590103 Nov 23 11:56 input.tar.gz
[2025-11-24 04:27:40] -rw-r--r-- 1 boinc boinc         0 Nov 23 11:56 boinc_lockfile
[2025-11-24 04:27:40] -rw-r--r-- 1 boinc boinc      2786 Nov 23 11:56 pandaJob.out
[2025-11-24 04:27:40] -rw------- 1 boinc boinc    989784 Nov 23 11:56 agis_schedconf.cvmfs.json
[2025-11-24 04:27:40] drwx------ 5 boinc boinc      4096 Nov 23 11:56 pilot3
[2025-11-24 04:27:40] -rw-r--r-- 1 boinc boinc       532 Nov 24 04:21 boinc_task_state.xml
[2025-11-24 04:27:40] -rw------- 1 boinc boinc 924564052 Nov 24 04:25 HITS.47523449._005974.pool.root.1
[2025-11-24 04:27:40] -rw------- 1 boinc boinc        95 Nov 24 04:25 pilot_heartbeat.json
[2025-11-24 04:27:40] -rw------- 1 boinc boinc      1039 Nov 24 04:25 memory_monitor_summary.json
[2025-11-24 04:27:40] -rw------- 1 boinc boinc   1526164 Nov 24 04:26 agis_ddmendpoints.agis.ALL.json
[2025-11-24 04:27:40] -rw------- 1 boinc boinc   1695393 Nov 24 04:26 log.47523449._005974.job.log.tgz.1
[2025-11-24 04:27:40] -rw------- 1 boinc boinc      7925 Nov 24 04:26 heartbeat.json
[2025-11-24 04:27:40] -rw------- 1 boinc boinc      4834 Nov 24 04:27 pilotlog.txt
[2025-11-24 04:27:40] -rw------- 1 boinc boinc   8034802 Nov 24 04:27 log.47523449._005974.job.log.1
[2025-11-24 04:27:40] -rw------- 1 boinc boinc       353 Nov 24 04:27 output.list
[2025-11-24 04:27:40] -rw-r--r-- 1 boinc boinc       620 Nov 24 04:27 runtime_log
[2025-11-24 04:27:40] -rw------- 1 boinc boinc   9748480 Nov 24 04:27 result.tar.gz
[2025-11-24 04:27:40] -rw-r--r-- 1 boinc boinc      9223 Nov 24 04:27 runtime_log.err
[2025-11-24 04:27:40] -rw------- 1 boinc boinc       671 Nov 24 04:27 e4ONDmNiKg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmdmGKDmBqWpGo.diag
[2025-11-24 04:27:40] -rw-r--r-- 1 boinc boinc        28 Nov 24 04:27 wrapper_checkpoint.txt
[2025-11-24 04:27:40] -rw-r--r-- 1 boinc boinc      8192 Nov 24 04:27 boinc_mmap_file
[2025-11-24 04:27:40] -rw-r--r-- 1 boinc boinc     21160 Nov 24 04:27 stderr.txt
[2025-11-24 04:27:40] HITS file was successfully produced:
[2025-11-24 04:27:40] -rw------- 1 boinc boinc 924564052 Nov 24 04:25 shared/HITS.pool.root.1
[2025-11-24 04:27:40]  *** Contents of shared directory: ***
[2025-11-24 04:27:40] total 1312208
[2025-11-24 04:27:40] -rw-r--r-- 2 boinc boinc 408768262 Nov 23 11:56 ATLAS.root_0
[2025-11-24 04:27:40] -rw-r--r-- 2 boinc boinc     15847 Nov 23 11:56 start_atlas.sh
[2025-11-24 04:27:40] -rw-r--r-- 2 boinc boinc    590103 Nov 23 11:56 input.tar.gz
[2025-11-24 04:27:40] -rw------- 1 boinc boinc 924564052 Nov 24 04:25 HITS.pool.root.1
[2025-11-24 04:27:40] -rw------- 1 boinc boinc   9748480 Nov 24 04:27 result.tar.gz
04:27:41 (809655): run_atlas exited; CPU time 230168.542068
04:27:41 (809655): called boinc_finish(0)

</stderr_txt>
]]>

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