Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:51:48 (3784112): wrapper (7.7.26015): starting
09:51:48 (3784112): wrapper: running run_atlas (--nthreads 4)
[2025-11-24 09:51:48] Arguments: --nthreads 4
[2025-11-24 09:51:48] Threads: 4
[2025-11-24 09:51:48] Checking for CVMFS
[2025-11-24 09:51:48] No cvmfs_config command found, will try listing directly
[2025-11-24 09:51:48] CVMFS is ok
[2025-11-24 09:51:48] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 09:51:48] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 09:51:48] Further information can be found at the LHC@home message board.
[2025-11-24 09:51:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 09:51:48] Checking for apptainer binary...
[2025-11-24 09:51:48] which: no apptainer in ((null))
[2025-11-24 09:51:48] apptainer is not installed, using version from CVMFS
[2025-11-24 09:51:48] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 09:51:48] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot116/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut17.grid.cesnet.cz
[2025-11-24 09:51:48] apptainer works
[2025-11-24 09:51:48] Set ATHENA_PROC_NUMBER=4
[2025-11-24 09:51:48] Set ATHENA_CORE_NUMBER=4
[2025-11-24 09:51:48] Starting ATLAS job with PandaID=6893862632
[2025-11-24 09:51:48] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot116/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 01:48:06]  *** The last 200 lines of the pilot log: ***
[2025-11-25 01:48:06] 2025-11-25 00:42:18,236 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 01:48:06] 2025-11-25 00:42:19,518 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 01:48:06] 2025-11-25 00:42:19,539 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2685.7470937499993
[2025-11-25 01:48:06] 2025-11-25 00:42:19,564 | INFO     | using path: /scratch/boinc/var/slot116/slots/0/PanDA_Pilot-6893862632/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 01:48:06] 2025-11-25 00:42:19,565 | INFO     | extracted standard info from prmon json
[2025-11-25 01:48:06] 2025-11-25 00:42:19,565 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 01:48:06] 2025-11-25 00:42:19,565 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 01:48:06] 2025-11-25 00:42:19,581 | INFO     | fitting pss+swap vs Time
[2025-11-25 01:48:06] 2025-11-25 00:42:19,582 | INFO     | sum of square deviations: 252649584335.49878
[2025-11-25 01:48:06] 2025-11-25 00:42:19,604 | INFO     | sum of deviations: 774681117315.6871
[2025-11-25 01:48:06] 2025-11-25 00:42:19,604 | INFO     | mean x: 1764002813.5010707
[2025-11-25 01:48:06] 2025-11-25 00:42:19,604 | INFO     | mean y: 2278538.812633833
[2025-11-25 01:48:06] 2025-11-25 00:42:19,604 | INFO     | intersect: -5406555495.508863
[2025-11-25 01:48:06] 2025-11-25 00:42:19,605 | INFO     | chi2: 3.596299585121393
[2025-11-25 01:48:06] 2025-11-25 00:42:19,606 | INFO     | sum of square deviations: 248613722922.99896
[2025-11-25 01:48:06] 2025-11-25 00:42:19,626 | INFO     | sum of deviations: 934532866571.703
[2025-11-25 01:48:06] 2025-11-25 00:42:19,626 | INFO     | mean x: 1764002661.0010765
[2025-11-25 01:48:06] 2025-11-25 00:42:19,626 | INFO     | mean y: 2284571.2981700753
[2025-11-25 01:48:06] 2025-11-25 00:42:19,626 | INFO     | intersect: -6628558022.761007
[2025-11-25 01:48:06] 2025-11-25 00:42:19,627 | INFO     | chi2: 1.9403283705605663
[2025-11-25 01:48:06] 2025-11-25 00:42:19,628 | INFO     | current chi2=1.9403283705605663 (change=46.04653131268343 %)
[2025-11-25 01:48:06] 2025-11-25 00:42:19,629 | INFO     | sum of square deviations: 244621071622.99878
[2025-11-25 01:48:06] 2025-11-25 00:42:19,649 | INFO     | sum of deviations: 923072780845.3461
[2025-11-25 01:48:06] 2025-11-25 00:42:19,649 | INFO     | mean x: 1764002508.5010822
[2025-11-25 01:48:06] 2025-11-25 00:42:19,649 | INFO     | mean y: 2284132.6536796535
[2025-11-25 01:48:06] 2025-11-25 00:42:19,649 | INFO     | intersect: -6654144482.170402
[2025-11-25 01:48:06] 2025-11-25 00:42:19,650 | INFO     | chi2: 1.934524968081636
[2025-11-25 01:48:06] 2025-11-25 00:42:19,651 | INFO     | current chi2=1.934524968081636 (change=0.29909383210500434 %)
[2025-11-25 01:48:06] 2025-11-25 00:42:19,651 | INFO     | right removable region: 923
[2025-11-25 01:48:06] 2025-11-25 00:42:19,652 | INFO     | sum of square deviations: 248613722312.99896
[2025-11-25 01:48:06] 2025-11-25 00:42:19,674 | INFO     | sum of deviations: 606971236455.0703
[2025-11-25 01:48:06] 2025-11-25 00:42:19,674 | INFO     | mean x: 1764002966.0010765
[2025-11-25 01:48:06] 2025-11-25 00:42:19,674 | INFO     | mean y: 2284863.930032293
[2025-11-25 01:48:06] 2025-11-25 00:42:19,674 | INFO     | intersect: -4304392383.901442
[2025-11-25 01:48:06] 2025-11-25 00:42:19,675 | INFO     | chi2: 1.7740377683575297
[2025-11-25 01:48:06] 2025-11-25 00:42:19,675 | INFO     | current chi2=1.7740377683575297 (change=50.67046761907498 %)
[2025-11-25 01:48:06] 2025-11-25 00:42:19,676 | INFO     | sum of square deviations: 244621070402.99872
[2025-11-25 01:48:06] 2025-11-25 00:42:19,698 | INFO     | sum of deviations: 594285792664.1548
[2025-11-25 01:48:06] 2025-11-25 00:42:19,698 | INFO     | mean x: 1764003118.5010822
[2025-11-25 01:48:06] 2025-11-25 00:42:19,698 | INFO     | mean y: 2285347.8441558443
[2025-11-25 01:48:06] 2025-11-25 00:42:19,698 | INFO     | intersect: -4283208088.2421484
[2025-11-25 01:48:06] 2025-11-25 00:42:19,699 | INFO     | chi2: 1.772494679951254
[2025-11-25 01:48:06] 2025-11-25 00:42:19,699 | INFO     | current chi2=1.772494679951254 (change=0.08698171108861759 %)
[2025-11-25 01:48:06] 2025-11-25 00:42:19,700 | INFO     | left removable region: 20
[2025-11-25 01:48:06] 2025-11-25 00:42:19,701 | INFO     | sum of square deviations: 228318539680.99884
[2025-11-25 01:48:06] 2025-11-25 00:42:19,714 | INFO     | time since job start (57016s) is within the limit (172800.0s)
[2025-11-25 01:48:06] 2025-11-25 00:42:19,721 | INFO     | sum of deviations: 730450162365.7239
[2025-11-25 01:48:06] 2025-11-25 00:42:19,722 | INFO     | mean x: 1764003088.0011075
[2025-11-25 01:48:06] 2025-11-25 00:42:19,722 | INFO     | mean y: 2291326.2757475083
[2025-11-25 01:48:06] 2025-11-25 00:42:19,722 | INFO     | intersect: -5641211579.113939
[2025-11-25 01:48:06] 2025-11-25 00:42:19,723 | INFO     | chi2: 0.0934318641916385
[2025-11-25 01:48:06] 2025-11-25 00:42:19,723 | INFO     | current memory leak: 3.20 B/s (using 903 data points, chi2=0.09)
[2025-11-25 01:48:06] 2025-11-25 00:42:19,724 | INFO     | could have reported an average CPU frequency of 2683 MHz (35 samples)
[2025-11-25 01:48:06] 2025-11-25 00:42:19,724 | INFO     | ..............................
[2025-11-25 01:48:06] 2025-11-25 00:42:19,724 | INFO     | . Timing measurements:
[2025-11-25 01:48:06] 2025-11-25 00:42:19,724 | INFO     | . get job = 0 s
[2025-11-25 01:48:06] 2025-11-25 00:42:19,724 | INFO     | . initial setup = 1 s
[2025-11-25 01:48:06] 2025-11-25 00:42:19,725 | INFO     | . payload setup = 9 s
[2025-11-25 01:48:06] 2025-11-25 00:42:19,725 | INFO     | . stage-in = 0 s
[2025-11-25 01:48:06] 2025-11-25 00:42:19,725 | INFO     | . payload execution = 56972 s
[2025-11-25 01:48:06] 2025-11-25 00:42:19,725 | INFO     | . stage-out = 2 s
[2025-11-25 01:48:06] 2025-11-25 00:42:19,725 | INFO     | . log creation = 0 s
[2025-11-25 01:48:06] 2025-11-25 00:42:19,725 | INFO     | ..............................
[2025-11-25 01:48:06] 2025-11-25 00:42:19,822 | INFO     | 
[2025-11-25 01:48:06] 2025-11-25 00:42:19,823 | INFO     | job summary report
[2025-11-25 01:48:06] 2025-11-25 00:42:19,823 | INFO     | --------------------------------------------------
[2025-11-25 01:48:06] 2025-11-25 00:42:19,823 | INFO     | PanDA job id: 6893862632
[2025-11-25 01:48:06] 2025-11-25 00:42:19,823 | INFO     | task id: 47523449
[2025-11-25 01:48:06] 2025-11-25 00:42:19,823 | INFO     | errors: (none)
[2025-11-25 01:48:06] 2025-11-25 00:42:19,823 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 01:48:06] 2025-11-25 00:42:19,823 | INFO     | pilot state: finished 
[2025-11-25 01:48:06] 2025-11-25 00:42:19,823 | INFO     | transexitcode: 0
[2025-11-25 01:48:06] 2025-11-25 00:42:19,823 | INFO     | exeerrorcode: 0
[2025-11-25 01:48:06] 2025-11-25 00:42:19,823 | INFO     | exeerrordiag: 
[2025-11-25 01:48:06] 2025-11-25 00:42:19,823 | INFO     | exitcode: 0
[2025-11-25 01:48:06] 2025-11-25 00:42:19,823 | INFO     | exitmsg: OK
[2025-11-25 01:48:06] 2025-11-25 00:42:19,824 | INFO     | cpuconsumptiontime: 225713 s
[2025-11-25 01:48:06] 2025-11-25 00:42:19,824 | INFO     | nevents: 1000
[2025-11-25 01:48:06] 2025-11-25 00:42:19,824 | INFO     | neventsw: 0
[2025-11-25 01:48:06] 2025-11-25 00:42:19,824 | INFO     | pid: 3795621
[2025-11-25 01:48:06] 2025-11-25 00:42:19,824 | INFO     | pgrp: 3795621
[2025-11-25 01:48:06] 2025-11-25 00:42:19,824 | INFO     | corecount: 4
[2025-11-25 01:48:06] 2025-11-25 00:42:19,824 | INFO     | event service: False
[2025-11-25 01:48:06] 2025-11-25 00:42:19,824 | INFO     | sizes: {0: 2298812, 6: 2299074, 11: 2299102, 56985: 2352044, 56986: 2352043, 56988: 2361908, 56991: 2362092, 56999: 2362338}
[2025-11-25 01:48:06] 2025-11-25 00:42:19,824 | INFO     | --------------------------------------------------
[2025-11-25 01:48:06] 2025-11-25 00:42:19,824 | INFO     | 
[2025-11-25 01:48:06] 2025-11-25 00:42:19,825 | INFO     | executing command: ls -lF /scratch/boinc/var/slot116/slots/0
[2025-11-25 01:48:06] 2025-11-25 00:42:19,850 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 01:48:06] 2025-11-25 00:42:19,850 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 01:48:06] 2025-11-25 00:42:19,850 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 01:48:06] 2025-11-25 00:42:19,851 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 01:48:06] 2025-11-25 00:42:19,851 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 01:48:06] 2025-11-25 00:42:19,851 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 01:48:06] 2025-11-25 00:42:19,851 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 01:48:06] 2025-11-25 00:42:19,851 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 01:48:06] 2025-11-25 00:42:19,851 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 01:48:06] 2025-11-25 00:42:19,851 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 01:48:06] 2025-11-25 00:42:19,851 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 01:48:06] 2025-11-25 00:42:19,851 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 01:48:06] 2025-11-25 00:42:19,851 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 01:48:06] 2025-11-25 00:42:19,851 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 01:48:06] 2025-11-25 00:42:19,852 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 01:48:06] 2025-11-25 00:42:19,852 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 01:48:06] 2025-11-25 00:42:19,852 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 01:48:06] 2025-11-25 00:42:19,852 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 01:48:06] 2025-11-25 00:42:19,852 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 01:48:06] 2025-11-25 00:42:19,852 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 01:48:06] 2025-11-25 00:42:19,852 | INFO     | job 6893862632 has completed (purged errors)
[2025-11-25 01:48:06] 2025-11-25 00:42:19,852 | INFO     | overall cleanup function is called
[2025-11-25 01:48:06] 2025-11-25 00:42:20,868 | INFO     | --- collectZombieJob: --- 10, [3795621]
[2025-11-25 01:48:06] 2025-11-25 00:42:20,869 | INFO     | zombie collector waiting for pid 3795621
[2025-11-25 01:48:06] 2025-11-25 00:42:20,869 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 01:48:06] 2025-11-25 00:42:20,869 | INFO     | collected zombie processes
[2025-11-25 01:48:06] 2025-11-25 00:42:20,869 | INFO     | will attempt to kill all subprocesses of pid=3795621
[2025-11-25 01:48:06] 2025-11-25 00:42:22,806 | INFO     | PID=3788154 has CPU usage=29.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-25 01:48:06] 2025-11-25 00:42:22,807 | INFO     | .. there are 7 such processes running
[2025-11-25 01:48:06] 2025-11-25 00:42:22,827 | INFO     | process IDs to be killed: [3795621] (in reverse order)
[2025-11-25 01:48:06] 2025-11-25 00:42:23,087 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 01:48:06] 2025-11-25 00:42:23,087 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 01:48:06] 2025-11-25 00:42:23,117 | INFO     | did not find any defunct processes belonging to 3795621
[2025-11-25 01:48:06] 2025-11-25 00:42:23,145 | INFO     | did not find any defunct processes belonging to 3795621
[2025-11-25 01:48:06] 2025-11-25 00:42:23,146 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 01:48:06] 2025-11-25 00:42:23,147 | INFO     | ready for new job
[2025-11-25 01:48:06] 2025-11-25 00:42:23,147 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 01:48:06] 2025-11-25 00:42:23,152 | INFO     | ***************************************
[2025-11-25 01:48:06] 2025-11-25 00:42:23,152 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 01:48:06] 2025-11-25 00:42:23,152 | INFO     | ***************************************
[2025-11-25 01:48:06] 2025-11-25 00:42:23,153 | INFO     | 
[2025-11-25 01:48:06] 2025-11-25 00:42:23,160 | INFO     | architecture information:
[2025-11-25 01:48:06] 2025-11-25 00:42:23,161 | INFO     | executing command: cat /etc/os-release
[2025-11-25 01:48:06] 2025-11-25 00:42:23,184 | INFO     | cat /etc/os-release:
[2025-11-25 01:48:06] NAME="CentOS Linux"
[2025-11-25 01:48:06] VERSION="7 (Core)"
[2025-11-25 01:48:06] ID="centos"
[2025-11-25 01:48:06] ID_LIKE="rhel fedora"
[2025-11-25 01:48:06] VERSION_ID="7"
[2025-11-25 01:48:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 01:48:06] ANSI_COLOR="0;31"
[2025-11-25 01:48:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 01:48:06] HOME_URL="https://www.centos.org/"
[2025-11-25 01:48:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 01:48:06] 
[2025-11-25 01:48:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 01:48:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 01:48:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 01:48:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 01:48:06] 
[2025-11-25 01:48:06] 2025-11-25 00:42:23,184 | INFO     | ***************************************
[2025-11-25 01:48:06] 2025-11-25 00:42:23,687 | INFO     | executing command: df -mP /scratch/boinc/var/slot116/slots/0
[2025-11-25 01:48:06] 2025-11-25 00:42:23,709 | INFO     | sufficient remaining disk space (3264795901952 B)
[2025-11-25 01:48:06] 2025-11-25 00:42:23,709 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 01:48:06] 2025-11-25 00:42:23,710 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 01:48:06] 2025-11-25 00:42:23,710 | INFO     | update_server=False
[2025-11-25 01:48:06] 2025-11-25 00:42:23,710 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 01:48:06] 2025-11-25 00:42:23,710 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-25 01:48:06] 2025-11-25 00:42:23,710 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 01:48:06] 2025-11-25 00:42:23,710 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 01:48:06] 2025-11-25 00:42:23,711 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 01:48:06] 2025-11-25 00:42:23,957 | INFO     | all job control threads have been joined
[2025-11-25 01:48:06] 2025-11-25 00:42:24,251 | INFO     | all data control threads have been joined
[2025-11-25 01:48:06] 2025-11-25 00:42:24,252 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 01:48:06] 2025-11-25 00:42:24,252 | INFO     | aborting loop
[2025-11-25 01:48:06] 2025-11-25 00:42:24,678 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 01:48:06] 2025-11-25 00:42:24,715 | INFO     | [job] retrieve thread has finished
[2025-11-25 01:48:06] 2025-11-25 00:42:24,766 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 01:48:06] 2025-11-25 00:42:24,839 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 01:48:06] 2025-11-25 00:42:24,962 | INFO     | [job] control thread has finished
[2025-11-25 01:48:06] 2025-11-25 00:42:25,028 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 01:48:06] 2025-11-25 00:42:25,036 | INFO     | [job] validate thread has finished
[2025-11-25 01:48:06] 2025-11-25 00:42:25,130 | INFO     | [payload] validate_post thread has finished
[2025-11-25 01:48:06] 2025-11-25 00:42:25,162 | INFO     | all payload control threads have been joined
[2025-11-25 01:48:06] 2025-11-25 00:42:25,258 | INFO     | [data] control thread has finished
[2025-11-25 01:48:06] 2025-11-25 00:42:25,258 | INFO     | [job] job monitor thread has finished
[2025-11-25 01:48:06] 2025-11-25 00:42:25,367 | INFO     | [data] copytool_in thread has finished
[2025-11-25 01:48:06] 2025-11-25 00:42:25,604 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 01:48:06] 2025-11-25 00:42:25,700 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 01:48:06] 2025-11-25 00:42:25,845 | INFO     | [job] queue monitor thread has finished
[2025-11-25 01:48:06] 2025-11-25 00:42:26,166 | INFO     | [payload] control thread has finished
[2025-11-25 01:48:06] 2025-11-25 00:42:26,302 | INFO     | [payload] failed_post thread has finished
[2025-11-25 01:48:06] 2025-11-25 00:42:26,683 | INFO     | [data] copytool_out thread has finished
[2025-11-25 01:48:06] 2025-11-25 00:42:26,912 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 01:48:06] 2025-11-25 00:42:30,918 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 01:48:06] 2025-11-25 00:42:35,665 | INFO     | [monitor] cgroup control has ended
[2025-11-25 01:48:06] 2025-11-25 00:42:36,639 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22822377137984)>', '<ExcThread(monitor, started 22822137067264)>']
[2025-11-25 01:48:06] 2025-11-25 00:42:36,775 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 01:48:06] 2025-11-25 00:42:36,776 | INFO     | [monitor] control thread has ended
[2025-11-25 01:48:06] 2025-11-25 00:42:41,641 | INFO     | all workflow threads have been joined
[2025-11-25 01:48:06] 2025-11-25 00:42:41,642 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 01:48:06] 2025-11-25 00:42:41,642 | INFO     | traces error code: 0
[2025-11-25 01:48:06] 2025-11-25 00:42:41,642 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 01:48:06] 2025-11-25 00:42:41,776 [wrapper] ==== pilot stdout END ====
[2025-11-25 01:48:06] 2025-11-25 00:42:41,780 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 01:48:06] 2025-11-25 00:42:41,784 [wrapper] pilotpid: 3788154
[2025-11-25 01:48:06] 2025-11-25 00:42:41,787 [wrapper] Pilot exit status: 0
[2025-11-25 01:48:06] 2025-11-25 00:42:41,802 [wrapper] pandaids: 6893862632
[2025-11-25 01:48:06] 2025-11-25 00:42:41,945 [wrapper] cleanup supervisor_pilot 1119599 3788155
[2025-11-25 01:48:06] 2025-11-25 00:42:41,949 [wrapper] Test setup, not cleaning
[2025-11-25 01:48:06] 2025-11-25 00:42:41,953 [wrapper] apfmon messages muted
[2025-11-25 01:48:06] 2025-11-25 00:42:41,957 [wrapper] ==== wrapper stdout END ====
[2025-11-25 01:48:06] 2025-11-25 00:42:41,960 [wrapper] ==== wrapper stderr END ====
[2025-11-25 01:48:06]  *** Error codes and diagnostics ***
[2025-11-25 01:48:06]     "exeErrorCode": 0,
[2025-11-25 01:48:06]     "exeErrorDiag": "",
[2025-11-25 01:48:06]     "pilotErrorCode": 0,
[2025-11-25 01:48:06]     "pilotErrorDiag": "",
[2025-11-25 01:48:06]  *** Listing of results directory ***
[2025-11-25 01:48:06] total 1306044
[2025-11-25 01:48:06] -rw-r--r-- 1 boinc boinc    576529 Nov 20 15:06 pilot3.tar.gz
[2025-11-25 01:48:06] -rwx------ 1 boinc boinc     36292 Nov 20 15:17 runpilot2-wrapper.sh
[2025-11-25 01:48:06] -rw-r--r-- 1 boinc boinc      5112 Nov 20 15:17 queuedata.json
[2025-11-25 01:48:06] -rw-r--r-- 1 boinc boinc       100 Nov 24 09:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 01:48:06] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 09:51 run_atlas
[2025-11-25 01:48:06] -rw-r--r-- 1 boinc boinc       105 Nov 24 09:51 job.xml
[2025-11-25 01:48:06] -rw-r--r-- 2 boinc boinc 407813534 Nov 24 09:51 EVNT.47493127._000597.pool.root.1
[2025-11-25 01:48:06] -rw-r--r-- 1 boinc boinc      6687 Nov 24 09:51 init_data.xml
[2025-11-25 01:48:06] -rw-r--r-- 2 boinc boinc     15847 Nov 24 09:51 start_atlas.sh
[2025-11-25 01:48:06] drwxrwx--x 2 boinc boinc      4096 Nov 24 09:51 shared
[2025-11-25 01:48:06] -rw-r--r-- 2 boinc boinc    590097 Nov 24 09:51 input.tar.gz
[2025-11-25 01:48:06] -rw-r--r-- 1 boinc boinc         0 Nov 24 09:51 boinc_lockfile
[2025-11-25 01:48:06] -rw-r--r-- 1 boinc boinc      2782 Nov 24 09:51 pandaJob.out
[2025-11-25 01:48:06] -rw------- 1 boinc boinc    989794 Nov 24 09:52 agis_schedconf.cvmfs.json
[2025-11-25 01:48:06] drwx------ 5 boinc boinc      4096 Nov 24 09:52 pilot3
[2025-11-25 01:48:06] -rw-r--r-- 1 boinc boinc       532 Nov 25 01:36 boinc_task_state.xml
[2025-11-25 01:48:06] -rw------- 1 boinc boinc 906582548 Nov 25 01:41 HITS.47523449._005961.pool.root.1
[2025-11-25 01:48:06] -rw------- 1 boinc boinc        95 Nov 25 01:41 pilot_heartbeat.json
[2025-11-25 01:48:06] -rw------- 1 boinc boinc      1041 Nov 25 01:42 memory_monitor_summary.json
[2025-11-25 01:48:06] -rw------- 1 boinc boinc   1516227 Nov 25 01:42 agis_ddmendpoints.agis.ALL.json
[2025-11-25 01:48:06] -rw------- 1 boinc boinc   1666147 Nov 25 01:42 log.47523449._005961.job.log.tgz.1
[2025-11-25 01:48:06] -rw------- 1 boinc boinc      7938 Nov 25 01:42 heartbeat.json
[2025-11-25 01:48:06] -rw------- 1 boinc boinc      4564 Nov 25 01:42 pilotlog.txt
[2025-11-25 01:48:06] -rw------- 1 boinc boinc   7873800 Nov 25 01:42 log.47523449._005961.job.log.1
[2025-11-25 01:48:06] -rw------- 1 boinc boinc       353 Nov 25 01:42 output.list
[2025-11-25 01:48:06] -rw-r--r-- 1 boinc boinc       620 Nov 25 01:42 runtime_log
[2025-11-25 01:48:06] -rw------- 1 boinc boinc   9564160 Nov 25 01:42 result.tar.gz
[2025-11-25 01:48:06] -rw------- 1 boinc boinc       670 Nov 25 01:42 vgHMDmYeKg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmY3HKDmGJzdhm.diag
[2025-11-25 01:48:06] -rw-r--r-- 1 boinc boinc      9223 Nov 25 01:42 runtime_log.err
[2025-11-25 01:48:06] -rw-r--r-- 1 boinc boinc      8192 Nov 25 01:48 boinc_mmap_file
[2025-11-25 01:48:06] -rw-r--r-- 1 boinc boinc        28 Nov 25 01:48 wrapper_checkpoint.txt
[2025-11-25 01:48:06] -rw-r--r-- 1 boinc boinc     21162 Nov 25 01:48 stderr.txt
[2025-11-25 01:48:06] HITS file was successfully produced:
[2025-11-25 01:48:06] -rw------- 1 boinc boinc 906582548 Nov 25 01:41 shared/HITS.pool.root.1
[2025-11-25 01:48:06]  *** Contents of shared directory: ***
[2025-11-25 01:48:06] total 1293536
[2025-11-25 01:48:06] -rw-r--r-- 2 boinc boinc 407813534 Nov 24 09:51 ATLAS.root_0
[2025-11-25 01:48:06] -rw-r--r-- 2 boinc boinc     15847 Nov 24 09:51 start_atlas.sh
[2025-11-25 01:48:06] -rw-r--r-- 2 boinc boinc    590097 Nov 24 09:51 input.tar.gz
[2025-11-25 01:48:06] -rw------- 1 boinc boinc 906582548 Nov 25 01:41 HITS.pool.root.1
[2025-11-25 01:48:06] -rw------- 1 boinc boinc   9564160 Nov 25 01:42 result.tar.gz
01:48:08 (3784112): run_atlas exited; CPU time 228649.646525
01:48:08 (3784112): called boinc_finish(0)

</stderr_txt>
]]>

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