Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:25:52 (1150367): wrapper (7.7.26015): starting
23:25:52 (1150367): wrapper: running run_atlas (--nthreads 4)
[2025-11-24 23:25:52] Arguments: --nthreads 4
[2025-11-24 23:25:52] Threads: 4
[2025-11-24 23:25:52] Checking for CVMFS
[2025-11-24 23:25:52] No cvmfs_config command found, will try listing directly
[2025-11-24 23:25:52] CVMFS is ok
[2025-11-24 23:25:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 23:25:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 23:25:52] Further information can be found at the LHC@home message board.
[2025-11-24 23:25:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 23:25:52] Checking for apptainer binary...
[2025-11-24 23:25:52] which: no apptainer in ((null))
[2025-11-24 23:25:52] apptainer is not installed, using version from CVMFS
[2025-11-24 23:25:52] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 23:25:52] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut30.grid.cesnet.cz
[2025-11-24 23:25:52] apptainer works
[2025-11-24 23:25:52] Set ATHENA_PROC_NUMBER=4
[2025-11-24 23:25:52] Set ATHENA_CORE_NUMBER=4
[2025-11-24 23:25:52] Starting ATLAS job with PandaID=6893862638
[2025-11-24 23:25:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 22:01:38]  *** The last 200 lines of the pilot log: ***
[2025-11-25 22:01:38] 2025-11-25 20:05:15,849 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 22:01:38] 2025-11-25 20:05:17,592 | INFO     | time since job start (77954s) is within the limit (172800.0s)
[2025-11-25 22:01:38] 2025-11-25 20:05:18,047 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 22:01:38] 2025-11-25 20:05:18,054 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2522.589825
[2025-11-25 22:01:38] 2025-11-25 20:05:18,062 | INFO     | using path: /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6893862638/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 22:01:38] 2025-11-25 20:05:18,063 | INFO     | extracted standard info from prmon json
[2025-11-25 22:01:38] 2025-11-25 20:05:18,064 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 22:01:38] 2025-11-25 20:05:18,064 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 22:01:38] 2025-11-25 20:05:18,089 | INFO     | fitting pss+swap vs Time
[2025-11-25 22:01:38] 2025-11-25 20:05:18,091 | INFO     | sum of square deviations: 647247870183.4368
[2025-11-25 22:01:38] 2025-11-25 20:05:18,136 | INFO     | sum of deviations: 1765063466517.3245
[2025-11-25 22:01:38] 2025-11-25 20:05:18,136 | INFO     | mean x: 1764062138.5070422
[2025-11-25 22:01:38] 2025-11-25 20:05:18,136 | INFO     | mean y: 2329861.575117371
[2025-11-25 22:01:38] 2025-11-25 20:05:18,136 | INFO     | intersect: -4808318078.390687
[2025-11-25 22:01:38] 2025-11-25 20:05:18,138 | INFO     | chi2: 5.1195230140025005
[2025-11-25 22:01:38] 2025-11-25 20:05:18,140 | INFO     | sum of square deviations: 639680745000.9362
[2025-11-25 22:01:38] 2025-11-25 20:05:18,186 | INFO     | sum of deviations: 2104243739072.4832
[2025-11-25 22:01:38] 2025-11-25 20:05:18,187 | INFO     | mean x: 1764061986.0070698
[2025-11-25 22:01:38] 2025-11-25 20:05:18,187 | INFO     | mean y: 2336697.1681068344
[2025-11-25 22:01:38] 2025-11-25 20:05:18,187 | INFO     | intersect: -5800583616.44195
[2025-11-25 22:01:38] 2025-11-25 20:05:18,189 | INFO     | chi2: 2.1474222463915282
[2025-11-25 22:01:38] 2025-11-25 20:05:18,189 | INFO     | current chi2=2.1474222463915282 (change=58.05425152854915 %)
[2025-11-25 22:01:38] 2025-11-25 20:05:18,191 | INFO     | sum of square deviations: 632172830230.9363
[2025-11-25 22:01:38] 2025-11-25 20:05:18,237 | INFO     | sum of deviations: 2136811839425.4656
[2025-11-25 22:01:38] 2025-11-25 20:05:18,238 | INFO     | mean x: 1764061833.5070977
[2025-11-25 22:01:38] 2025-11-25 20:05:18,238 | INFO     | mean y: 2337358.1703470033
[2025-11-25 22:01:38] 2025-11-25 20:05:18,238 | INFO     | intersect: -5960380479.51267
[2025-11-25 22:01:38] 2025-11-25 20:05:18,240 | INFO     | chi2: 2.071736677763344
[2025-11-25 22:01:38] 2025-11-25 20:05:18,240 | INFO     | current chi2=2.071736677763344 (change=3.5244847051093062 %)
[2025-11-25 22:01:38] 2025-11-25 20:05:18,240 | INFO     | right removable region: 1267
[2025-11-25 22:01:38] 2025-11-25 20:05:18,242 | INFO     | sum of square deviations: 639680739510.936
[2025-11-25 22:01:38] 2025-11-25 20:05:18,288 | INFO     | sum of deviations: 1516115757444.3325
[2025-11-25 22:01:38] 2025-11-25 20:05:18,289 | INFO     | mean x: 1764062291.0070698
[2025-11-25 22:01:38] 2025-11-25 20:05:18,289 | INFO     | mean y: 2334872.4076983505
[2025-11-25 22:01:38] 2025-11-25 20:05:18,289 | INFO     | intersect: -4178692429.671083
[2025-11-25 22:01:38] 2025-11-25 20:05:18,291 | INFO     | chi2: 3.216798741412402
[2025-11-25 22:01:38] 2025-11-25 20:05:18,291 | INFO     | current chi2=3.216798741412402 (change=37.16604588720322 %)
[2025-11-25 22:01:38] 2025-11-25 20:05:18,293 | INFO     | sum of square deviations: 632172819250.9364
[2025-11-25 22:01:38] 2025-11-25 20:05:18,339 | INFO     | sum of deviations: 1481678157230.514
[2025-11-25 22:01:38] 2025-11-25 20:05:18,339 | INFO     | mean x: 1764062443.5070977
[2025-11-25 22:01:38] 2025-11-25 20:05:18,339 | INFO     | mean y: 2335571.7208201895
[2025-11-25 22:01:38] 2025-11-25 20:05:18,339 | INFO     | intersect: -4132250274.017093
[2025-11-25 22:01:38] 2025-11-25 20:05:18,341 | INFO     | chi2: 3.210786164734462
[2025-11-25 22:01:38] 2025-11-25 20:05:18,342 | INFO     | current chi2=3.210786164734462 (change=0.18691180770917004 %)
[2025-11-25 22:01:38] 2025-11-25 20:05:18,342 | INFO     | left removable region: 20
[2025-11-25 22:01:38] 2025-11-25 20:05:18,344 | INFO     | sum of square deviations: 601281049554.9608
[2025-11-25 22:01:38] 2025-11-25 20:05:18,357 | INFO     | monitor loop #5621: job 0:6893862638 is in state 'finished'
[2025-11-25 22:01:38] 2025-11-25 20:05:18,372 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 22:01:38] 2025-11-25 20:05:18,390 | INFO     | sum of deviations: 1817354220956.6335
[2025-11-25 22:01:38] 2025-11-25 20:05:18,390 | INFO     | mean x: 1764062413.0056136
[2025-11-25 22:01:38] 2025-11-25 20:05:18,390 | INFO     | mean y: 2343798.6238973537
[2025-11-25 22:01:38] 2025-11-25 20:05:18,390 | INFO     | intersect: -5329482765.142859
[2025-11-25 22:01:38] 2025-11-25 20:05:18,392 | INFO     | chi2: 0.14578582961534448
[2025-11-25 22:01:38] 2025-11-25 20:05:18,393 | INFO     | current memory leak: 3.02 B/s (using 1247 data points, chi2=0.15)
[2025-11-25 22:01:38] 2025-11-25 20:05:18,394 | INFO     | could have reported an average CPU frequency of 2488 MHz (46 samples)
[2025-11-25 22:01:38] 2025-11-25 20:05:18,394 | INFO     | ..............................
[2025-11-25 22:01:38] 2025-11-25 20:05:18,394 | INFO     | . Timing measurements:
[2025-11-25 22:01:38] 2025-11-25 20:05:18,394 | INFO     | . get job = 0 s
[2025-11-25 22:01:38] 2025-11-25 20:05:18,395 | INFO     | . initial setup = 1 s
[2025-11-25 22:01:38] 2025-11-25 20:05:18,395 | INFO     | . payload setup = 6 s
[2025-11-25 22:01:38] 2025-11-25 20:05:18,395 | INFO     | . stage-in = 0 s
[2025-11-25 22:01:38] 2025-11-25 20:05:18,395 | INFO     | . payload execution = 77918 s
[2025-11-25 22:01:38] 2025-11-25 20:05:18,395 | INFO     | . stage-out = 2 s
[2025-11-25 22:01:38] 2025-11-25 20:05:18,395 | INFO     | . log creation = 0 s
[2025-11-25 22:01:38] 2025-11-25 20:05:18,395 | INFO     | ..............................
[2025-11-25 22:01:38] 2025-11-25 20:05:18,865 | INFO     | 
[2025-11-25 22:01:38] 2025-11-25 20:05:18,865 | INFO     | job summary report
[2025-11-25 22:01:38] 2025-11-25 20:05:18,865 | INFO     | --------------------------------------------------
[2025-11-25 22:01:38] 2025-11-25 20:05:18,865 | INFO     | PanDA job id: 6893862638
[2025-11-25 22:01:38] 2025-11-25 20:05:18,865 | INFO     | task id: 47523449
[2025-11-25 22:01:38] 2025-11-25 20:05:18,866 | INFO     | errors: (none)
[2025-11-25 22:01:38] 2025-11-25 20:05:18,866 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 22:01:38] 2025-11-25 20:05:18,866 | INFO     | pilot state: finished 
[2025-11-25 22:01:38] 2025-11-25 20:05:18,866 | INFO     | transexitcode: 0
[2025-11-25 22:01:38] 2025-11-25 20:05:18,866 | INFO     | exeerrorcode: 0
[2025-11-25 22:01:38] 2025-11-25 20:05:18,866 | INFO     | exeerrordiag: 
[2025-11-25 22:01:38] 2025-11-25 20:05:18,866 | INFO     | exitcode: 0
[2025-11-25 22:01:38] 2025-11-25 20:05:18,866 | INFO     | exitmsg: OK
[2025-11-25 22:01:38] 2025-11-25 20:05:18,867 | INFO     | cpuconsumptiontime: 308771 s
[2025-11-25 22:01:38] 2025-11-25 20:05:18,867 | INFO     | nevents: 1000
[2025-11-25 22:01:38] 2025-11-25 20:05:18,867 | INFO     | neventsw: 0
[2025-11-25 22:01:38] 2025-11-25 20:05:18,867 | INFO     | pid: 1160845
[2025-11-25 22:01:38] 2025-11-25 20:05:18,867 | INFO     | pgrp: 1160845
[2025-11-25 22:01:38] 2025-11-25 20:05:18,867 | INFO     | corecount: 4
[2025-11-25 22:01:38] 2025-11-25 20:05:18,867 | INFO     | event service: False
[2025-11-25 22:01:38] 2025-11-25 20:05:18,867 | INFO     | sizes: {0: 2284150, 1: 2284349, 5: 2284611, 12: 2284667, 77928: 2345013, 77931: 2354034, 77932: 2354218, 77939: 2354464}
[2025-11-25 22:01:38] 2025-11-25 20:05:18,867 | INFO     | --------------------------------------------------
[2025-11-25 22:01:38] 2025-11-25 20:05:18,868 | INFO     | 
[2025-11-25 22:01:38] 2025-11-25 20:05:18,868 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2025-11-25 22:01:38] 2025-11-25 20:05:18,887 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 22:01:38] 2025-11-25 20:05:18,888 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 22:01:38] 2025-11-25 20:05:18,888 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 22:01:38] 2025-11-25 20:05:18,888 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 22:01:38] 2025-11-25 20:05:18,888 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 22:01:38] 2025-11-25 20:05:18,888 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 22:01:38] 2025-11-25 20:05:18,888 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 22:01:38] 2025-11-25 20:05:18,889 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 22:01:38] 2025-11-25 20:05:18,889 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 22:01:38] 2025-11-25 20:05:18,889 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 22:01:38] 2025-11-25 20:05:18,889 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 22:01:38] 2025-11-25 20:05:18,889 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 22:01:38] 2025-11-25 20:05:18,889 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 22:01:38] 2025-11-25 20:05:18,890 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 22:01:38] 2025-11-25 20:05:18,890 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 22:01:38] 2025-11-25 20:05:18,890 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 22:01:38] 2025-11-25 20:05:18,890 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 22:01:38] 2025-11-25 20:05:18,890 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 22:01:38] 2025-11-25 20:05:18,890 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 22:01:38] 2025-11-25 20:05:18,891 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 22:01:38] 2025-11-25 20:05:18,891 | INFO     | job 6893862638 has completed (purged errors)
[2025-11-25 22:01:38] 2025-11-25 20:05:18,891 | INFO     | overall cleanup function is called
[2025-11-25 22:01:38] 2025-11-25 20:05:19,905 | INFO     | --- collectZombieJob: --- 10, [1160845]
[2025-11-25 22:01:38] 2025-11-25 20:05:19,905 | INFO     | zombie collector waiting for pid 1160845
[2025-11-25 22:01:38] 2025-11-25 20:05:19,906 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 22:01:38] 2025-11-25 20:05:19,906 | INFO     | collected zombie processes
[2025-11-25 22:01:38] 2025-11-25 20:05:19,906 | INFO     | will attempt to kill all subprocesses of pid=1160845
[2025-11-25 22:01:38] 2025-11-25 20:05:20,287 | INFO     | process IDs to be killed: [1160845] (in reverse order)
[2025-11-25 22:01:38] 2025-11-25 20:05:20,382 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 22:01:38] 2025-11-25 20:05:20,382 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 22:01:38] 2025-11-25 20:05:20,393 | INFO     | did not find any defunct processes belonging to 1160845
[2025-11-25 22:01:38] 2025-11-25 20:05:20,403 | INFO     | did not find any defunct processes belonging to 1160845
[2025-11-25 22:01:38] 2025-11-25 20:05:20,405 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 22:01:38] 2025-11-25 20:05:20,405 | INFO     | ready for new job
[2025-11-25 22:01:38] 2025-11-25 20:05:20,405 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 22:01:38] 2025-11-25 20:05:20,412 | INFO     | ***************************************
[2025-11-25 22:01:38] 2025-11-25 20:05:20,412 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 22:01:38] 2025-11-25 20:05:20,412 | INFO     | ***************************************
[2025-11-25 22:01:38] 2025-11-25 20:05:20,412 | INFO     | 
[2025-11-25 22:01:38] 2025-11-25 20:05:20,415 | INFO     | architecture information:
[2025-11-25 22:01:38] 2025-11-25 20:05:20,416 | INFO     | executing command: cat /etc/os-release
[2025-11-25 22:01:38] 2025-11-25 20:05:20,430 | INFO     | cat /etc/os-release:
[2025-11-25 22:01:38] NAME="CentOS Linux"
[2025-11-25 22:01:38] VERSION="7 (Core)"
[2025-11-25 22:01:38] ID="centos"
[2025-11-25 22:01:38] ID_LIKE="rhel fedora"
[2025-11-25 22:01:38] VERSION_ID="7"
[2025-11-25 22:01:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 22:01:38] ANSI_COLOR="0;31"
[2025-11-25 22:01:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 22:01:38] HOME_URL="https://www.centos.org/"
[2025-11-25 22:01:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 22:01:38] 
[2025-11-25 22:01:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 22:01:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 22:01:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 22:01:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 22:01:38] 
[2025-11-25 22:01:38] 2025-11-25 20:05:20,431 | INFO     | ***************************************
[2025-11-25 22:01:38] 2025-11-25 20:05:20,934 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2025-11-25 22:01:38] 2025-11-25 20:05:20,949 | INFO     | sufficient remaining disk space (1658883932160 B)
[2025-11-25 22:01:38] 2025-11-25 20:05:20,949 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 22:01:38] 2025-11-25 20:05:20,949 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 22:01:38] 2025-11-25 20:05:20,950 | INFO     | update_server=False
[2025-11-25 22:01:38] 2025-11-25 20:05:20,950 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 22:01:38] 2025-11-25 20:05:20,950 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 22:01:38] 2025-11-25 20:05:21,186 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 22:01:38] 2025-11-25 20:05:21,344 | INFO     | all payload control threads have been joined
[2025-11-25 22:01:38] 2025-11-25 20:05:21,458 | INFO     | all data control threads have been joined
[2025-11-25 22:01:38] 2025-11-25 20:05:21,885 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 22:01:38] 2025-11-25 20:05:21,888 | INFO     | aborting loop
[2025-11-25 22:01:38] 2025-11-25 20:05:21,954 | INFO     | [job] retrieve thread has finished
[2025-11-25 22:01:38] 2025-11-25 20:05:22,019 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 22:01:38] 2025-11-25 20:05:22,118 | INFO     | all job control threads have been joined
[2025-11-25 22:01:38] 2025-11-25 20:05:22,129 | INFO     | [job] validate thread has finished
[2025-11-25 22:01:38] 2025-11-25 20:05:22,250 | INFO     | [payload] failed_post thread has finished
[2025-11-25 22:01:38] 2025-11-25 20:05:22,349 | INFO     | [payload] control thread has finished
[2025-11-25 22:01:38] 2025-11-25 20:05:22,366 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 22:01:38] 2025-11-25 20:05:22,463 | INFO     | [data] control thread has finished
[2025-11-25 22:01:38] 2025-11-25 20:05:22,596 | INFO     | [payload] validate_post thread has finished
[2025-11-25 22:01:38] 2025-11-25 20:05:22,793 | INFO     | [data] copytool_in thread has finished
[2025-11-25 22:01:38] 2025-11-25 20:05:22,892 | INFO     | [job] job monitor thread has finished
[2025-11-25 22:01:38] 2025-11-25 20:05:22,955 | INFO     | [data] copytool_out thread has finished
[2025-11-25 22:01:38] 2025-11-25 20:05:23,106 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 22:01:38] 2025-11-25 20:05:23,124 | INFO     | [job] control thread has finished
[2025-11-25 22:01:38] 2025-11-25 20:05:23,288 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 22:01:38] 2025-11-25 20:05:23,517 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 22:01:38] 2025-11-25 20:05:24,523 | INFO     | [job] queue monitor thread has finished
[2025-11-25 22:01:38] 2025-11-25 20:05:25,192 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 22:01:38] 2025-11-25 20:05:51,126 | INFO     | PID=1154022 has CPU usage=9.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 22:01:38] 2025-11-25 20:05:51,127 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 22:01:38] 2025-11-25 20:05:51,127 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 22:01:38] 2025-11-25 20:05:51,127 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 22:01:38] 2025-11-25 20:06:10,663 | INFO     | [monitor] cgroup control has ended
[2025-11-25 22:01:38] 2025-11-25 20:06:11,118 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22751419115328)>', '<ExcThread(monitor, started 22750840215296)>']
[2025-11-25 22:01:38] 2025-11-25 20:06:11,213 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 22:01:38] 2025-11-25 20:06:11,213 | INFO     | [monitor] control thread has ended
[2025-11-25 22:01:38] 2025-11-25 20:06:16,143 | INFO     | all workflow threads have been joined
[2025-11-25 22:01:38] 2025-11-25 20:06:16,144 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 22:01:38] 2025-11-25 20:06:16,145 | INFO     | traces error code: 0
[2025-11-25 22:01:38] 2025-11-25 20:06:16,145 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 22:01:38] 2025-11-25 20:06:16,273 [wrapper] ==== pilot stdout END ====
[2025-11-25 22:01:38] 2025-11-25 20:06:16,276 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 22:01:38] 2025-11-25 20:06:16,279 [wrapper] pilotpid: 1154022
[2025-11-25 22:01:38] 2025-11-25 20:06:16,281 [wrapper] Pilot exit status: 0
[2025-11-25 22:01:38] 2025-11-25 20:06:16,290 [wrapper] pandaids: 6893862638
[2025-11-25 22:01:38] 2025-11-25 20:06:16,358 [wrapper] cleanup supervisor_pilot 1894533 1154023
[2025-11-25 22:01:38] 2025-11-25 20:06:16,360 [wrapper] Test setup, not cleaning
[2025-11-25 22:01:38] 2025-11-25 20:06:16,364 [wrapper] apfmon messages muted
[2025-11-25 22:01:38] 2025-11-25 20:06:16,366 [wrapper] ==== wrapper stdout END ====
[2025-11-25 22:01:38] 2025-11-25 20:06:16,369 [wrapper] ==== wrapper stderr END ====
[2025-11-25 22:01:38]  *** Error codes and diagnostics ***
[2025-11-25 22:01:38]     "exeErrorCode": 0,
[2025-11-25 22:01:38]     "exeErrorDiag": "",
[2025-11-25 22:01:38]     "pilotErrorCode": 0,
[2025-11-25 22:01:38]     "pilotErrorDiag": "",
[2025-11-25 22:01:38]  *** Listing of results directory ***
[2025-11-25 22:01:38] total 1317856
[2025-11-25 22:01:38] -rw-r--r-- 1 boinc boinc    576529 Nov 20 15:06 pilot3.tar.gz
[2025-11-25 22:01:38] -rw-r--r-- 1 boinc boinc      5112 Nov 20 15:17 queuedata.json
[2025-11-25 22:01:38] -rwx------ 1 boinc boinc     36292 Nov 20 15:18 runpilot2-wrapper.sh
[2025-11-25 22:01:38] -rw-r--r-- 1 boinc boinc       100 Nov 24 23:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 22:01:38] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 23:25 run_atlas
[2025-11-25 22:01:38] -rw-r--r-- 1 boinc boinc       105 Nov 24 23:25 job.xml
[2025-11-25 22:01:38] -rw-r--r-- 2 boinc boinc 407813534 Nov 24 23:25 EVNT.47493127._000597.pool.root.1
[2025-11-25 22:01:38] -rw-r--r-- 1 boinc boinc      6420 Nov 24 23:25 init_data.xml
[2025-11-25 22:01:38] -rw-r--r-- 2 boinc boinc     15847 Nov 24 23:25 start_atlas.sh
[2025-11-25 22:01:38] drwxrwx--x 2 boinc boinc      4096 Nov 24 23:25 shared
[2025-11-25 22:01:38] -rw-r--r-- 2 boinc boinc    590104 Nov 24 23:25 input.tar.gz
[2025-11-25 22:01:38] -rw-r--r-- 1 boinc boinc         0 Nov 24 23:25 boinc_lockfile
[2025-11-25 22:01:38] -rw-r--r-- 1 boinc boinc      2786 Nov 24 23:25 pandaJob.out
[2025-11-25 22:01:38] -rw------- 1 boinc boinc    991801 Nov 24 23:26 agis_schedconf.cvmfs.json
[2025-11-25 22:01:38] drwx------ 5 boinc boinc      4096 Nov 24 23:26 pilot3
[2025-11-25 22:01:38] -rw-r--r-- 1 boinc boinc       531 Nov 25 20:55 boinc_task_state.xml
[2025-11-25 22:01:38] -rw------- 1 boinc boinc 912071710 Nov 25 21:04 HITS.47523449._005967.pool.root.1
[2025-11-25 22:01:38] -rw------- 1 boinc boinc      1048 Nov 25 21:05 memory_monitor_summary.json
[2025-11-25 22:01:38] -rw------- 1 boinc boinc        95 Nov 25 21:05 pilot_heartbeat.json
[2025-11-25 22:01:38] -rw------- 1 boinc boinc   1516240 Nov 25 21:05 agis_ddmendpoints.agis.ALL.json
[2025-11-25 22:01:38] -rw------- 1 boinc boinc   1953160 Nov 25 21:05 log.47523449._005967.job.log.tgz.1
[2025-11-25 22:01:38] -rw------- 1 boinc boinc      8629 Nov 25 21:05 heartbeat.json
[2025-11-25 22:01:38] -rw------- 1 boinc boinc      4759 Nov 25 21:06 pilotlog.txt
[2025-11-25 22:01:38] -rw------- 1 boinc boinc  10888480 Nov 25 21:06 log.47523449._005967.job.log.1
[2025-11-25 22:01:38] -rw------- 1 boinc boinc       353 Nov 25 21:06 output.list
[2025-11-25 22:01:38] -rw-r--r-- 1 boinc boinc       620 Nov 25 21:06 runtime_log
[2025-11-25 22:01:38] -rw------- 1 boinc boinc  12861440 Nov 25 21:06 result.tar.gz
[2025-11-25 22:01:38] -rw-r--r-- 1 boinc boinc      9206 Nov 25 21:06 runtime_log.err
[2025-11-25 22:01:38] -rw------- 1 boinc boinc       671 Nov 25 21:06 RoXLDmOfKg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmh3HKDmVT8xCn.diag
[2025-11-25 22:01:38] -rw-r--r-- 1 boinc boinc        28 Nov 25 22:01 wrapper_checkpoint.txt
[2025-11-25 22:01:38] -rw-r--r-- 1 boinc boinc      8192 Nov 25 22:01 boinc_mmap_file
[2025-11-25 22:01:38] -rw-r--r-- 1 boinc boinc     21160 Nov 25 22:01 stderr.txt
[2025-11-25 22:01:38] HITS file was successfully produced:
[2025-11-25 22:01:38] -rw------- 1 boinc boinc 912071710 Nov 25 21:04 shared/HITS.pool.root.1
[2025-11-25 22:01:38]  *** Contents of shared directory: ***
[2025-11-25 22:01:38] total 1302116
[2025-11-25 22:01:38] -rw-r--r-- 2 boinc boinc 407813534 Nov 24 23:25 ATLAS.root_0
[2025-11-25 22:01:38] -rw-r--r-- 2 boinc boinc     15847 Nov 24 23:25 start_atlas.sh
[2025-11-25 22:01:38] -rw-r--r-- 2 boinc boinc    590104 Nov 24 23:25 input.tar.gz
[2025-11-25 22:01:38] -rw------- 1 boinc boinc 912071710 Nov 25 21:04 HITS.pool.root.1
[2025-11-25 22:01:38] -rw------- 1 boinc boinc  12861440 Nov 25 21:06 result.tar.gz
22:01:40 (1150367): run_atlas exited; CPU time 311788.560717
22:01:40 (1150367): called boinc_finish(0)

</stderr_txt>
]]>

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