Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:18:41 (2183436): wrapper (7.7.26015): starting
16:18:41 (2183436): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 16:18:41] Arguments: --nthreads 8
[2025-11-20 16:18:41] Threads: 8
[2025-11-20 16:18:41] Checking for CVMFS
[2025-11-20 16:18:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 16:18:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 16:18:41] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 16:18:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 16:18:41] 2.11.3.0 733561 20456 192764 153102 2 80 29885873 45568001 9840 130560 0 143470105 99.796 96656383 21850 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.164:3129 1
[2025-11-20 16:18:41] CVMFS is ok
[2025-11-20 16:18:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 16:18:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 16:18:41] Further information can be found at the LHC@home message board.
[2025-11-20 16:18:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 16:18:41] Checking for apptainer binary...
[2025-11-20 16:18:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 16:18:41] Running /usr/bin/apptainer --version
[2025-11-20 16:18:41] apptainer version 1.4.1-1.el9
[2025-11-20 16:18:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 16:18:42] wns0024.triumf.lcg
[2025-11-20 16:18:42] apptainer works
[2025-11-20 16:18:42] Set ATHENA_PROC_NUMBER=8
[2025-11-20 16:18:42] Set ATHENA_CORE_NUMBER=8
[2025-11-20 16:18:42] Starting ATLAS job with PandaID=6893877429
[2025-11-20 16:18:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 16:25:37]  *** The last 200 lines of the pilot log: ***
[2025-11-20 16:25:37] 2025-11-21 00:25:04,573 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-20 16:25:37] 2025-11-21 00:25:04,574 | WARNING  | wrong length of table data, x=[1763684440.0, 1763684501.0], y=[979.0, 809963.0] (must be same and length>=4)
[2025-11-20 16:25:37] 2025-11-21 00:25:04,574 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-20 16:25:37] 2025-11-21 00:25:04,574 | INFO     | ..............................
[2025-11-20 16:25:37] 2025-11-21 00:25:04,575 | INFO     | . Timing measurements:
[2025-11-20 16:25:37] 2025-11-21 00:25:04,575 | INFO     | . get job = 0 s
[2025-11-20 16:25:37] 2025-11-21 00:25:04,575 | INFO     | . initial setup = 6 s
[2025-11-20 16:25:37] 2025-11-21 00:25:04,575 | INFO     | . payload setup = 28 s
[2025-11-20 16:25:37] 2025-11-21 00:25:04,575 | INFO     | . stage-in = 0 s
[2025-11-20 16:25:37] 2025-11-21 00:25:04,575 | INFO     | . payload execution = 138 s
[2025-11-20 16:25:37] 2025-11-21 00:25:04,575 | INFO     | . stage-out = 1 s
[2025-11-20 16:25:37] 2025-11-21 00:25:04,575 | INFO     | . log creation = 0 s
[2025-11-20 16:25:37] 2025-11-21 00:25:04,575 | INFO     | ..............................
[2025-11-20 16:25:37] 2025-11-21 00:25:04,575 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-20 16:25:37] 2025-11-21 00:25:04,575 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6893877429/pilotlog.txt
[2025-11-20 16:25:37] 2025-11-21 00:25:04,591 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-20 16:25:37] - Log from pilotlog.txt -
[2025-11-20 16:25:37] 2025-11-21 00:25:04,572 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6893877429/memory_monitor_summary.json (trf name=prmon)
[2025-11-20 16:25:37] 2025-11-21 00:25:04,572 | INFO     | extracted standard info from prmon json
[2025-11-20 16:25:37] 2025-11-21 00:25:04,573 | INFO     | extracted standard memory fields from prmon json
[2025-11-20 16:25:37] 2025-11-21 00:25:04,573 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 16:25:37] 2025-11-21 00:25:04,573 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-20 16:25:37] 2025-11-21 00:25:04,573 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-20 16:25:37] 2025-11-21 00:25:04,574 | WARNING  | wrong length of table data, x=[1763684440.0, 1763684501.0], y=[979.0, 809963.0] (must be same and length>=4)
[2025-11-20 16:25:37] 2025-11-21 00:25:04,574 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-20 16:25:37] 2025-11-21 00:25:04,574 | INFO     | ..............................
[2025-11-20 16:25:37] 2025-11-21 00:25:04,575 | INFO     | . Timing measurements:
[2025-11-20 16:25:37] 2025-11-21 00:25:04,575 | INFO     | . get job = 0 s
[2025-11-20 16:25:37] 2025-11-21 00:25:04,575 | INFO     | . initial setup = 6 s
[2025-11-20 16:25:37] 2025-11-21 00:25:04,575 | INFO     | . payload setup = 28 s
[2025-11-20 16:25:37] 2025-11-21 00:25:04,575 | INFO     | . stage-in = 0 s
[2025-11-20 16:25:37] 2025-11-21 00:25:04,575 | INFO     | . payload execution = 138 s
[2025-11-20 16:25:37] 2025-11-21 00:25:04,575 | INFO     | . stage-out = 1 s
[2025-11-20 16:25:37] 2025-11-21 00:25:04,575 | INFO     | . log creation = 0 s
[2025-11-20 16:25:37] 2025-11-21 00:25:04,575 | INFO     | ..............................
[2025-11-20 16:25:37] 2025-11-21 00:25:04,575 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-20 16:25:37] 2025-11-21 00:25:04,575 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6893877429/pilotlog.txt
[2025-11-20 16:25:37] 2025-11-21 00:25:04,592 | WARNING  | 
[2025-11-20 16:25:37] [begin log extracts]
[2025-11-20 16:25:37] - Log from pilotlog.txt -
[2025-11-20 16:25:37] 2025-11-21 00:25:04,572 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6893877429/memory_monitor_summary.json (trf name=prmon)
[2025-11-20 16:25:37] 2025-11-21 00:25:04,572 | INFO     | extracted standard info from prmon json
[2025-11-20 16:25:37] 2025-11-21 00:25:04,573 | INFO     | extracted standard memory fields from prmon json
[2025-11-20 16:25:37] 2025-11-21 00:25:04,573 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 16:25:37] 2025-11-21 00:25:04,573 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-20 16:25:37] 2025-11-21 00:25:04,573 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-20 16:25:37] 2025-11-21 00:25:04,574 | WARNING  | wrong length of table data, x=[1763684440.0, 1763684501.0], y=[979.0, 809963.0] (must be same and length>=4)
[2025-11-20 16:25:37] 2025-11-21 00:25:04,574 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-20 16:25:37] 2025-11-21 00:25:04,574 | INFO     | ..............................
[2025-11-20 16:25:37] 2025-11-21 00:25:04,575 | INFO     | . Timing measurements:
[2025-11-20 16:25:37] 2025-11-21 00:25:04,575 | INFO     | . get job = 0 s
[2025-11-20 16:25:37] 2025-11-21 00:25:04,575 | INFO     | . initial setup = 6 s
[2025-11-20 16:25:37] 2025-11-21 00:25:04,575 | INFO     | . payload setup = 28 s
[2025-11-20 16:25:37] 2025-11-21 00:25:04,575 | INFO     | . stage-in = 0 s
[2025-11-20 16:25:37] 2025-11-21 00:25:04,575 | INFO     | . payload execution = 138 s
[2025-11-20 16:25:37] 2025-11-21 00:25:04,575 | INFO     | . stage-out = 1 s
[2025-11-20 16:25:37] 2025-11-21 00:25:04,575 | INFO     | . log creation = 0 s
[2025-11-20 16:25:37] 2025-11-21 00:25:04,575 | INFO     | ..............................
[2025-11-20 16:25:37] 2025-11-21 00:25:04,575 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-20 16:25:37] 2025-11-21 00:25:04,575 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6893877429/pilotlog.txt
[2025-11-20 16:25:37] [end log extracts]
[2025-11-20 16:25:37] 2025-11-21 00:25:04,592 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-20 16:25:37] 2025-11-21 00:25:04,593 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-20 16:25:37] 2025-11-21 00:25:04,911 | INFO     | 
[2025-11-20 16:25:37] 2025-11-21 00:25:04,911 | INFO     | job summary report
[2025-11-20 16:25:37] 2025-11-21 00:25:04,912 | INFO     | --------------------------------------------------
[2025-11-20 16:25:37] 2025-11-21 00:25:04,912 | INFO     | PanDA job id: 6893877429
[2025-11-20 16:25:37] 2025-11-21 00:25:04,912 | INFO     | task id: 47523449
[2025-11-20 16:25:37] 2025-11-21 00:25:04,912 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-20 16:22:33,642 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-20 16:25:37] 2025-11-21 00:25:04,912 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-20 16:25:37] 2025-11-21 00:25:04,912 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 16:25:37] 2025-11-21 00:25:04,912 | INFO     | pilot state: failed 
[2025-11-20 16:25:37] 2025-11-21 00:25:04,912 | INFO     | transexitcode: 65
[2025-11-20 16:25:37] 2025-11-21 00:25:04,912 | INFO     | exeerrorcode: 65
[2025-11-20 16:25:37] 2025-11-21 00:25:04,912 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-20 16:25:37] 2025-11-21 00:25:04,912 | INFO     | exitcode: 65
[2025-11-20 16:25:37] 2025-11-21 00:25:04,912 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-20 16:25:37] 2025-11-21 00:25:04,912 | INFO     | cpuconsumptiontime: 49 s
[2025-11-20 16:25:37] 2025-11-21 00:25:04,912 | INFO     | nevents: 0
[2025-11-20 16:25:37] 2025-11-21 00:25:04,913 | INFO     | neventsw: 0
[2025-11-20 16:25:37] 2025-11-21 00:25:04,913 | INFO     | pid: 2194519
[2025-11-20 16:25:37] 2025-11-21 00:25:04,913 | INFO     | pgrp: 2194519
[2025-11-20 16:25:37] 2025-11-21 00:25:04,913 | INFO     | corecount: 8
[2025-11-20 16:25:37] 2025-11-21 00:25:04,913 | INFO     | event service: False
[2025-11-20 16:25:37] 2025-11-21 00:25:04,913 | INFO     | sizes: {0: 2298582, 1: 2298781, 12: 2298781, 17: 2299071, 23: 2299099, 172: 2324683, 174: 2328973, 175: 2329001, 315: 2329195}
[2025-11-20 16:25:37] 2025-11-21 00:25:04,913 | INFO     | --------------------------------------------------
[2025-11-20 16:25:37] 2025-11-21 00:25:04,913 | INFO     | 
[2025-11-20 16:25:37] 2025-11-21 00:25:04,913 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-20 16:25:37] 2025-11-21 00:25:05,023 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 16:25:37] 2025-11-21 00:25:05,024 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 16:25:37] 2025-11-21 00:25:05,024 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 16:25:37] 2025-11-21 00:25:05,024 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 16:25:37] 2025-11-21 00:25:05,024 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 16:25:37] 2025-11-21 00:25:05,024 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 16:25:37] 2025-11-21 00:25:05,024 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 16:25:37] 2025-11-21 00:25:05,024 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 16:25:37] 2025-11-21 00:25:05,024 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 16:25:37] 2025-11-21 00:25:05,024 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 16:25:37] 2025-11-21 00:25:05,024 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 16:25:37] 2025-11-21 00:25:05,024 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 16:25:37] 2025-11-21 00:25:05,025 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 16:25:37] 2025-11-21 00:25:05,025 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 16:25:37] 2025-11-21 00:25:05,025 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 16:25:37] 2025-11-21 00:25:05,025 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 16:25:37] 2025-11-21 00:25:05,025 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 16:25:37] 2025-11-21 00:25:05,025 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 16:25:37] 2025-11-21 00:25:05,025 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 16:25:37] 2025-11-21 00:25:05,025 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 16:25:37] 2025-11-21 00:25:05,025 | INFO     | job 6893877429 has completed (purged errors)
[2025-11-20 16:25:37] 2025-11-21 00:25:05,025 | INFO     | overall cleanup function is called
[2025-11-20 16:25:37] 2025-11-21 00:25:06,049 | INFO     | --- collectZombieJob: --- 10, [2194519]
[2025-11-20 16:25:37] 2025-11-21 00:25:06,049 | INFO     | zombie collector waiting for pid 2194519
[2025-11-20 16:25:37] 2025-11-21 00:25:06,049 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 16:25:37] 2025-11-21 00:25:06,049 | INFO     | collected zombie processes
[2025-11-20 16:25:37] 2025-11-21 00:25:06,050 | INFO     | will attempt to kill all subprocesses of pid=2194519
[2025-11-20 16:25:37] 2025-11-21 00:25:06,982 | INFO     | process IDs to be killed: [2194519] (in reverse order)
[2025-11-20 16:25:37] 2025-11-21 00:25:07,177 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 16:25:37] 2025-11-21 00:25:07,178 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 16:25:37] 2025-11-21 00:25:07,190 | INFO     | did not find any defunct processes belonging to 2194519
[2025-11-20 16:25:37] 2025-11-21 00:25:07,207 | INFO     | did not find any defunct processes belonging to 2194519
[2025-11-20 16:25:37] 2025-11-21 00:25:07,208 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 16:25:37] 2025-11-21 00:25:07,208 | INFO     | ready for new job
[2025-11-20 16:25:37] 2025-11-21 00:25:07,209 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 16:25:37] 2025-11-21 00:25:07,216 | INFO     | ***************************************
[2025-11-20 16:25:37] 2025-11-21 00:25:07,216 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 16:25:37] 2025-11-21 00:25:07,216 | INFO     | ***************************************
[2025-11-20 16:25:37] 2025-11-21 00:25:07,217 | INFO     | 
[2025-11-20 16:25:37] 2025-11-21 00:25:07,218 | INFO     | architecture information:
[2025-11-20 16:25:37] 2025-11-21 00:25:07,235 | INFO     | executing command: cat /etc/os-release
[2025-11-20 16:25:37] 2025-11-21 00:25:07,334 | INFO     | cat /etc/os-release:
[2025-11-20 16:25:37] NAME="CentOS Linux"
[2025-11-20 16:25:37] VERSION="7 (Core)"
[2025-11-20 16:25:37] ID="centos"
[2025-11-20 16:25:37] ID_LIKE="rhel fedora"
[2025-11-20 16:25:37] VERSION_ID="7"
[2025-11-20 16:25:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 16:25:37] ANSI_COLOR="0;31"
[2025-11-20 16:25:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 16:25:37] HOME_URL="https://www.centos.org/"
[2025-11-20 16:25:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 16:25:37] 
[2025-11-20 16:25:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 16:25:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 16:25:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 16:25:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 16:25:37] 
[2025-11-20 16:25:37] 2025-11-21 00:25:07,335 | INFO     | ***************************************
[2025-11-20 16:25:37] 2025-11-21 00:25:07,838 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-20 16:25:37] 2025-11-21 00:25:07,920 | INFO     | sufficient remaining disk space (1266655690752 B)
[2025-11-20 16:25:37] 2025-11-21 00:25:07,921 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 16:25:37] 2025-11-21 00:25:07,921 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 16:25:37] 2025-11-21 00:25:07,921 | INFO     | update_server=False
[2025-11-20 16:25:37] 2025-11-21 00:25:07,921 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 16:25:37] 2025-11-21 00:25:07,922 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 16:25:37] 2025-11-21 00:25:08,230 | INFO     | all data control threads have been joined
[2025-11-20 16:25:37] 2025-11-21 00:25:08,569 | INFO     | all job control threads have been joined
[2025-11-20 16:25:37] 2025-11-21 00:25:08,775 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 16:25:37] 2025-11-21 00:25:08,775 | INFO     | aborting loop
[2025-11-20 16:25:37] 2025-11-21 00:25:08,883 | INFO     | all payload control threads have been joined
[2025-11-20 16:25:37] 2025-11-21 00:25:08,927 | INFO     | [job] retrieve thread has finished
[2025-11-20 16:25:37] 2025-11-21 00:25:09,236 | INFO     | [data] control thread has finished
[2025-11-20 16:25:37] 2025-11-21 00:25:09,255 | INFO     | [payload] validate_post thread has finished
[2025-11-20 16:25:37] 2025-11-21 00:25:09,484 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 16:25:37] 2025-11-21 00:25:09,576 | INFO     | [job] control thread has finished
[2025-11-20 16:25:37] 2025-11-21 00:25:09,604 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 16:25:37] 2025-11-21 00:25:09,643 | INFO     | [job] validate thread has finished
[2025-11-20 16:25:37] 2025-11-21 00:25:09,781 | INFO     | [job] job monitor thread has finished
[2025-11-20 16:25:37] 2025-11-21 00:25:09,793 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 16:25:37] 2025-11-21 00:25:09,897 | INFO     | [payload] control thread has finished
[2025-11-20 16:25:37] 2025-11-21 00:25:09,898 | INFO     | [data] copytool_in thread has finished
[2025-11-20 16:25:37] 2025-11-21 00:25:09,926 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 16:25:37] 2025-11-21 00:25:09,930 | INFO     | [data] copytool_out thread has finished
[2025-11-20 16:25:37] 2025-11-21 00:25:10,027 | INFO     | [payload] failed_post thread has finished
[2025-11-20 16:25:37] 2025-11-21 00:25:10,366 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 16:25:37] 2025-11-21 00:25:10,932 | INFO     | [job] queue monitor thread has finished
[2025-11-20 16:25:37] 2025-11-21 00:25:11,292 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 16:25:37] 2025-11-21 00:25:14,671 | INFO     | [monitor] cgroup control has ended
[2025-11-20 16:25:37] 2025-11-21 00:25:15,301 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 16:25:37] 2025-11-21 00:25:15,677 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140054287263552)>', '<ExcThread(monitor, started 140053439309568)>']
[2025-11-20 16:25:37] 2025-11-21 00:25:20,703 | INFO     | all workflow threads have been joined
[2025-11-20 16:25:37] 2025-11-21 00:25:20,703 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 16:25:37] 2025-11-21 00:25:20,704 | INFO     | traces error code: 0
[2025-11-20 16:25:37] 2025-11-21 00:25:20,704 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 16:25:37] 2025-11-21 00:25:36,969 | INFO     | PID=2187385 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-20 16:25:37] 2025-11-21 00:25:36,969 | INFO     | .. there are 19 such processes running
[2025-11-20 16:25:37] 2025-11-21 00:25:36,970 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 16:25:37] 2025-11-21 00:25:36,971 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 16:25:37] 2025-11-21 00:25:36,971 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 16:25:37] 2025-11-21 00:25:36,971 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 16:25:37] 2025-11-21 00:25:36,971 | INFO     | [monitor] control thread has ended
[2025-11-20 16:25:37] 2025-11-21 00:25:37,115 [wrapper] ==== pilot stdout END ====
[2025-11-20 16:25:37] 2025-11-21 00:25:37,117 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 16:25:37] 2025-11-21 00:25:37,119 [wrapper] pilotpid: 2187385
[2025-11-20 16:25:37] 2025-11-21 00:25:37,121 [wrapper] Pilot exit status: 0
[2025-11-20 16:25:37] 2025-11-21 00:25:37,244 [wrapper] pandaids: 6893877429
[2025-11-20 16:25:37] 2025-11-21 00:25:37,408 [wrapper] cleanup supervisor_pilot 2187391 2187386
[2025-11-20 16:25:37] 2025-11-21 00:25:37,410 [wrapper] Test setup, not cleaning
[2025-11-20 16:25:37] 2025-11-21 00:25:37,412 [wrapper] apfmon messages muted
[2025-11-20 16:25:37] 2025-11-21 00:25:37,414 [wrapper] ==== wrapper stdout END ====
[2025-11-20 16:25:37] 2025-11-21 00:25:37,416 [wrapper] ==== wrapper stderr END ====
[2025-11-20 16:25:37]  *** Error codes and diagnostics ***
[2025-11-20 16:25:37]     "exeErrorCode": 65,
[2025-11-20 16:25:37]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-20 16:25:37]     "pilotErrorCode": 1305,
[2025-11-20 16:25:37]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-20 16:25:37]  *** Listing of results directory ***
[2025-11-20 16:25:37] total 402484
[2025-11-20 16:25:37] -rw-r--r--. 1 boinc boinc    576529 Nov 20 10:04 pilot3.tar.gz
[2025-11-20 16:25:37] -rwx------. 1 boinc boinc     36292 Nov 20 10:47 runpilot2-wrapper.sh
[2025-11-20 16:25:37] -rw-r--r--. 1 boinc boinc      5112 Nov 20 10:47 queuedata.json
[2025-11-20 16:25:37] -rw-r--r--. 1 boinc boinc       100 Nov 20 16:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 16:25:37] -rwxr-xr-x. 1 boinc boinc      7986 Nov 20 16:18 run_atlas
[2025-11-20 16:25:37] -rw-r--r--. 1 boinc boinc       105 Nov 20 16:18 job.xml
[2025-11-20 16:25:37] -rw-r--r--. 1 boinc boinc      6445 Nov 20 16:18 init_data.xml
[2025-11-20 16:25:37] -rw-r--r--. 2 boinc boinc 407928529 Nov 20 16:18 EVNT.47493127._000803.pool.root.1
[2025-11-20 16:25:37] -rw-r--r--. 2 boinc boinc     15847 Nov 20 16:18 start_atlas.sh
[2025-11-20 16:25:37] drwxrwx--x. 2 boinc boinc      4096 Nov 20 16:18 shared
[2025-11-20 16:25:37] -rw-r--r--. 2 boinc boinc    590094 Nov 20 16:18 input.tar.gz
[2025-11-20 16:25:37] -rw-r--r--. 1 boinc boinc         0 Nov 20 16:18 boinc_lockfile
[2025-11-20 16:25:37] -rw-r--r--. 1 boinc boinc      2785 Nov 20 16:18 pandaJob.out
[2025-11-20 16:25:37] -rw-------. 1 boinc boinc    989817 Nov 20 16:19 agis_schedconf.cvmfs.json
[2025-11-20 16:25:37] -rw-------. 1 boinc boinc   1526164 Nov 20 16:19 agis_ddmendpoints.agis.ALL.json
[2025-11-20 16:25:37] drwx------. 5 boinc boinc      4096 Nov 20 16:19 pilot3
[2025-11-20 16:25:37] -rw-r--r--. 1 boinc boinc       525 Nov 20 16:21 boinc_task_state.xml
[2025-11-20 16:25:37] -rw-------. 1 boinc boinc       988 Nov 20 16:22 memory_monitor_summary.json
[2025-11-20 16:25:37] -rw-------. 1 boinc boinc     50272 Nov 20 16:22 log.47523449._008029.job.log.tgz.1
[2025-11-20 16:25:37] -rw-------. 1 boinc boinc     10331 Nov 20 16:25 heartbeat.json
[2025-11-20 16:25:37] -rw-r--r--. 1 boinc boinc      8192 Nov 20 16:25 boinc_mmap_file
[2025-11-20 16:25:37] -rw-r--r--. 1 boinc boinc        23 Nov 20 16:25 wrapper_checkpoint.txt
[2025-11-20 16:25:37] -rw-------. 1 boinc boinc        95 Nov 20 16:25 pilot_heartbeat.json
[2025-11-20 16:25:37] -rw-------. 1 boinc boinc       823 Nov 20 16:25 pilotlog.txt
[2025-11-20 16:25:37] -rw-------. 1 boinc boinc    109341 Nov 20 16:25 log.47523449._008029.job.log.1
[2025-11-20 16:25:37] -rw-------. 1 boinc boinc       186 Nov 20 16:25 output.list
[2025-11-20 16:25:37] -rw-r--r--. 1 boinc boinc       620 Nov 20 16:25 runtime_log
[2025-11-20 16:25:37] -rw-------. 1 boinc boinc    184320 Nov 20 16:25 result.tar.gz
[2025-11-20 16:25:37] -rw-r--r--. 1 boinc boinc      8634 Nov 20 16:25 runtime_log.err
[2025-11-20 16:25:37] -rw-------. 1 boinc boinc       647 Nov 20 16:25 nutNDmHsOg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm6xGKDmn5H8Ao.diag
[2025-11-20 16:25:37] -rw-r--r--. 1 boinc boinc      2134 Nov 20 16:25 stderr.txt
[2025-11-20 16:25:37] No HITS result produced
[2025-11-20 16:25:37]  *** Contents of shared directory: ***
[2025-11-20 16:25:37] total 399148
[2025-11-20 16:25:37] -rw-r--r--. 2 boinc boinc 407928529 Nov 20 16:18 ATLAS.root_0
[2025-11-20 16:25:37] -rw-r--r--. 2 boinc boinc     15847 Nov 20 16:18 start_atlas.sh
[2025-11-20 16:25:37] -rw-r--r--. 2 boinc boinc    590094 Nov 20 16:18 input.tar.gz
[2025-11-20 16:25:37] -rw-------. 1 boinc boinc    184320 Nov 20 16:25 result.tar.gz
16:25:39 (2183436): run_atlas exited; CPU time 54.587940
16:25:39 (2183436): called boinc_finish(0)

</stderr_txt>
]]>

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