Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:00:11 (29217): wrapper (7.7.26015): starting
19:00:11 (29217): wrapper: running run_atlas (--nthreads 12)
[2025-11-20 19:00:11] Arguments: --nthreads 12
[2025-11-20 19:00:11] Threads: 12
[2025-11-20 19:00:11] Checking for CVMFS
[2025-11-20 19:00:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 19:00:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 19:00:11] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 19:00:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 19:00:11] 2.11.2.0 2998 279687 96056 153101 2 82 18306395 20275200 1 130560 1 126062256 99.967 16620420 14355 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-20 19:00:11] CVMFS is ok
[2025-11-20 19:00:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 19:00:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 19:00:11] Further information can be found at the LHC@home message board.
[2025-11-20 19:00:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 19:00:11] Checking for apptainer binary...
[2025-11-20 19:00:11] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 19:00:11] Running /usr/bin/apptainer --version
[2025-11-20 19:00:11] apptainer version 1.3.2-1.el7
[2025-11-20 19:00:11] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 19:00:12] c-205-25.aglt2.org
[2025-11-20 19:00:12] apptainer works
[2025-11-20 19:00:12] Set ATHENA_PROC_NUMBER=12
[2025-11-20 19:00:12] Set ATHENA_CORE_NUMBER=12
[2025-11-20 19:00:12] Starting ATLAS job with PandaID=6892541303
[2025-11-20 19:00:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 02:18:16]  *** The last 200 lines of the pilot log: ***
[2025-11-21 02:18:16] 2025-11-21 07:17:18,316 | INFO     | time since job start (26211s) is within the limit (172800.0s)
[2025-11-21 02:18:16] 2025-11-21 07:17:20,125 | INFO     | monitor loop #1962: job 0:6892541303 is in state 'finished'
[2025-11-21 02:18:16] 2025-11-21 07:17:20,125 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 02:18:16] 2025-11-21 07:17:20,317 | INFO     | time since job start (26213s) is within the limit (172800.0s)
[2025-11-21 02:18:16] 2025-11-21 07:17:20,941 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-21 02:18:16] 2025-11-21 07:17:20,945 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.9166666666667
[2025-11-21 02:18:16] 2025-11-21 07:17:20,946 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6892541303/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 02:18:16] 2025-11-21 07:17:20,947 | INFO     | extracted standard info from prmon json
[2025-11-21 02:18:16] 2025-11-21 07:17:20,947 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 02:18:16] 2025-11-21 07:17:20,947 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 02:18:16] 2025-11-21 07:17:20,954 | INFO     | fitting pss+swap vs Time
[2025-11-21 02:18:16] 2025-11-21 07:17:20,954 | INFO     | sum of square deviations: 24653933187.20007
[2025-11-21 02:18:16] 2025-11-21 07:17:20,958 | INFO     | sum of deviations: 400810791363.00006
[2025-11-21 02:18:16] 2025-11-21 07:17:20,958 | INFO     | mean x: 1763696340.6
[2025-11-21 02:18:16] 2025-11-21 07:17:20,958 | INFO     | mean y: 3422720.2093023257
[2025-11-21 02:18:16] 2025-11-21 07:17:20,959 | INFO     | intersect: -28669832805.887806
[2025-11-21 02:18:16] 2025-11-21 07:17:20,959 | INFO     | chi2: 6.1509145255507125
[2025-11-21 02:18:16] 2025-11-21 07:17:20,960 | INFO     | sum of square deviations: 23803893154.64933
[2025-11-21 02:18:16] 2025-11-21 07:17:20,963 | INFO     | sum of deviations: 565279711904.7622
[2025-11-21 02:18:16] 2025-11-21 07:17:20,964 | INFO     | mean x: 1763696188.1011765
[2025-11-21 02:18:16] 2025-11-21 07:17:20,964 | INFO     | mean y: 3452190.0752941174
[2025-11-21 02:18:16] 2025-11-21 07:17:20,964 | INFO     | intersect: -41879682918.12577
[2025-11-21 02:18:16] 2025-11-21 07:17:20,964 | INFO     | chi2: 3.1203876086039366
[2025-11-21 02:18:16] 2025-11-21 07:17:20,964 | INFO     | current chi2=3.1203876086039366 (change=49.26953389383089 %)
[2025-11-21 02:18:16] 2025-11-21 07:17:20,965 | INFO     | sum of square deviations: 22973620934.59762
[2025-11-21 02:18:16] 2025-11-21 07:17:20,969 | INFO     | sum of deviations: 614454359169.9313
[2025-11-21 02:18:16] 2025-11-21 07:17:20,969 | INFO     | mean x: 1763696035.602381
[2025-11-21 02:18:16] 2025-11-21 07:17:20,969 | INFO     | mean y: 3461181.269047619
[2025-11-21 02:18:16] 2025-11-21 07:17:20,969 | INFO     | intersect: -47168498363.62672
[2025-11-21 02:18:16] 2025-11-21 07:17:20,970 | INFO     | chi2: 2.6210129447455293
[2025-11-21 02:18:16] 2025-11-21 07:17:20,970 | INFO     | current chi2=2.6210129447455293 (change=16.003610015674553 %)
[2025-11-21 02:18:16] 2025-11-21 07:17:20,970 | INFO     | right removable region: 419
[2025-11-21 02:18:16] 2025-11-21 07:17:20,970 | INFO     | sum of square deviations: 23803866924.649326
[2025-11-21 02:18:16] 2025-11-21 07:17:20,974 | INFO     | sum of deviations: 253819254783.36414
[2025-11-21 02:18:16] 2025-11-21 07:17:20,974 | INFO     | mean x: 1763696493.1011765
[2025-11-21 02:18:16] 2025-11-21 07:17:20,974 | INFO     | mean y: 3449018.2705882355
[2025-11-21 02:18:16] 2025-11-21 07:17:20,975 | INFO     | intersect: -18802744570.360733
[2025-11-21 02:18:16] 2025-11-21 07:17:20,975 | INFO     | chi2: 3.7235496564731068
[2025-11-21 02:18:16] 2025-11-21 07:17:20,975 | INFO     | current chi2=3.7235496564731068 (change=39.463479113462 %)
[2025-11-21 02:18:16] 2025-11-21 07:17:20,976 | INFO     | sum of square deviations: 22973568474.597603
[2025-11-21 02:18:16] 2025-11-21 07:17:20,979 | INFO     | sum of deviations: 219119599690.81207
[2025-11-21 02:18:16] 2025-11-21 07:17:20,979 | INFO     | mean x: 1763696645.602381
[2025-11-21 02:18:16] 2025-11-21 07:17:20,980 | INFO     | mean y: 3455385.3880952382
[2025-11-21 02:18:16] 2025-11-21 07:17:20,980 | INFO     | intersect: -16818506922.632963
[2025-11-21 02:18:16] 2025-11-21 07:17:20,980 | INFO     | chi2: 3.664248855782226
[2025-11-21 02:18:16] 2025-11-21 07:17:20,980 | INFO     | current chi2=3.664248855782226 (change=1.5925878841924586 %)
[2025-11-21 02:18:16] 2025-11-21 07:17:20,980 | INFO     | left removable region: 20
[2025-11-21 02:18:16] 2025-11-21 07:17:20,981 | INFO     | sum of square deviations: 19696989340.786858
[2025-11-21 02:18:16] 2025-11-21 07:17:20,984 | INFO     | sum of deviations: 378696834101.3507
[2025-11-21 02:18:16] 2025-11-21 07:17:20,984 | INFO     | mean x: 1763696615.102757
[2025-11-21 02:18:16] 2025-11-21 07:17:20,985 | INFO     | mean y: 3505418.7719298247
[2025-11-21 02:18:16] 2025-11-21 07:17:20,985 | INFO     | intersect: -33905551082.14411
[2025-11-21 02:18:16] 2025-11-21 07:17:20,985 | INFO     | chi2: 0.06470011955232687
[2025-11-21 02:18:16] 2025-11-21 07:17:20,985 | INFO     | current memory leak: 19.23 B/s (using 399 data points, chi2=0.06)
[2025-11-21 02:18:16] 2025-11-21 07:17:20,986 | INFO     | could have reported an average CPU frequency of 2418 MHz (18 samples)
[2025-11-21 02:18:16] 2025-11-21 07:17:20,986 | INFO     | ..............................
[2025-11-21 02:18:16] 2025-11-21 07:17:20,986 | INFO     | . Timing measurements:
[2025-11-21 02:18:16] 2025-11-21 07:17:20,986 | INFO     | . get job = 0 s
[2025-11-21 02:18:16] 2025-11-21 07:17:20,986 | INFO     | . initial setup = 2 s
[2025-11-21 02:18:16] 2025-11-21 07:17:20,986 | INFO     | . payload setup = 7 s
[2025-11-21 02:18:16] 2025-11-21 07:17:20,986 | INFO     | . stage-in = 0 s
[2025-11-21 02:18:16] 2025-11-21 07:17:20,987 | INFO     | . payload execution = 26176 s
[2025-11-21 02:18:16] 2025-11-21 07:17:20,987 | INFO     | . stage-out = 3 s
[2025-11-21 02:18:16] 2025-11-21 07:17:20,987 | INFO     | . log creation = 0 s
[2025-11-21 02:18:16] 2025-11-21 07:17:20,987 | INFO     | ..............................
[2025-11-21 02:18:16] 2025-11-21 07:17:21,109 | INFO     | 
[2025-11-21 02:18:16] 2025-11-21 07:17:21,110 | INFO     | job summary report
[2025-11-21 02:18:16] 2025-11-21 07:17:21,110 | INFO     | --------------------------------------------------
[2025-11-21 02:18:16] 2025-11-21 07:17:21,110 | INFO     | PanDA job id: 6892541303
[2025-11-21 02:18:16] 2025-11-21 07:17:21,110 | INFO     | task id: 47493029
[2025-11-21 02:18:16] 2025-11-21 07:17:21,110 | INFO     | errors: (none)
[2025-11-21 02:18:16] 2025-11-21 07:17:21,110 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 02:18:16] 2025-11-21 07:17:21,111 | INFO     | pilot state: finished 
[2025-11-21 02:18:16] 2025-11-21 07:17:21,111 | INFO     | transexitcode: 0
[2025-11-21 02:18:16] 2025-11-21 07:17:21,111 | INFO     | exeerrorcode: 0
[2025-11-21 02:18:16] 2025-11-21 07:17:21,111 | INFO     | exeerrordiag: 
[2025-11-21 02:18:16] 2025-11-21 07:17:21,111 | INFO     | exitcode: 0
[2025-11-21 02:18:16] 2025-11-21 07:17:21,111 | INFO     | exitmsg: OK
[2025-11-21 02:18:16] 2025-11-21 07:17:21,112 | INFO     | cpuconsumptiontime: 300591 s
[2025-11-21 02:18:16] 2025-11-21 07:17:21,112 | INFO     | nevents: 1000
[2025-11-21 02:18:16] 2025-11-21 07:17:21,112 | INFO     | neventsw: 0
[2025-11-21 02:18:16] 2025-11-21 07:17:21,112 | INFO     | pid: 8705
[2025-11-21 02:18:16] 2025-11-21 07:17:21,112 | INFO     | pgrp: 8705
[2025-11-21 02:18:16] 2025-11-21 07:17:21,112 | INFO     | corecount: 12
[2025-11-21 02:18:16] 2025-11-21 07:17:21,112 | INFO     | event service: False
[2025-11-21 02:18:16] 2025-11-21 07:17:21,113 | INFO     | sizes: {0: 2298745, 5: 2299007, 11: 2299063, 26187: 2336456, 26191: 2345450, 26192: 2345506, 26197: 2345880}
[2025-11-21 02:18:16] 2025-11-21 07:17:21,113 | INFO     | --------------------------------------------------
[2025-11-21 02:18:16] 2025-11-21 07:17:21,113 | INFO     | 
[2025-11-21 02:18:16] 2025-11-21 07:17:21,113 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-21 02:18:16] 2025-11-21 07:17:21,138 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 02:18:16] 2025-11-21 07:17:21,138 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 02:18:16] 2025-11-21 07:17:21,138 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 02:18:16] 2025-11-21 07:17:21,138 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 02:18:16] 2025-11-21 07:17:21,138 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 02:18:16] 2025-11-21 07:17:21,139 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 02:18:16] 2025-11-21 07:17:21,139 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 02:18:16] 2025-11-21 07:17:21,139 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 02:18:16] 2025-11-21 07:17:21,139 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 02:18:16] 2025-11-21 07:17:21,139 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 02:18:16] 2025-11-21 07:17:21,139 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 02:18:16] 2025-11-21 07:17:21,140 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 02:18:16] 2025-11-21 07:17:21,140 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 02:18:16] 2025-11-21 07:17:21,140 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 02:18:16] 2025-11-21 07:17:21,140 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 02:18:16] 2025-11-21 07:17:21,140 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 02:18:16] 2025-11-21 07:17:21,140 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 02:18:16] 2025-11-21 07:17:21,141 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 02:18:16] 2025-11-21 07:17:21,141 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 02:18:16] 2025-11-21 07:17:21,141 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 02:18:16] 2025-11-21 07:17:21,141 | INFO     | job 6892541303 has completed (purged errors)
[2025-11-21 02:18:16] 2025-11-21 07:17:21,141 | INFO     | overall cleanup function is called
[2025-11-21 02:18:16] 2025-11-21 07:17:22,158 | INFO     | --- collectZombieJob: --- 10, [8705]
[2025-11-21 02:18:16] 2025-11-21 07:17:22,158 | INFO     | zombie collector waiting for pid 8705
[2025-11-21 02:18:16] 2025-11-21 07:17:22,158 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 02:18:16] 2025-11-21 07:17:22,158 | INFO     | collected zombie processes
[2025-11-21 02:18:16] 2025-11-21 07:17:22,159 | INFO     | will attempt to kill all subprocesses of pid=8705
[2025-11-21 02:18:16] 2025-11-21 07:17:22,250 | INFO     | process IDs to be killed: [8705] (in reverse order)
[2025-11-21 02:18:16] 2025-11-21 07:17:22,301 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 02:18:16] 2025-11-21 07:17:22,301 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 02:18:16] 2025-11-21 07:17:22,305 | INFO     | did not find any defunct processes belonging to 8705
[2025-11-21 02:18:16] 2025-11-21 07:17:22,307 | INFO     | did not find any defunct processes belonging to 8705
[2025-11-21 02:18:16] 2025-11-21 07:17:22,309 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 02:18:16] 2025-11-21 07:17:22,309 | INFO     | ready for new job
[2025-11-21 02:18:16] 2025-11-21 07:17:22,309 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 02:18:16] 2025-11-21 07:17:22,311 | INFO     | ***************************************
[2025-11-21 02:18:16] 2025-11-21 07:17:22,311 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 02:18:16] 2025-11-21 07:17:22,311 | INFO     | ***************************************
[2025-11-21 02:18:16] 2025-11-21 07:17:22,311 | INFO     | 
[2025-11-21 02:18:16] 2025-11-21 07:17:22,312 | INFO     | architecture information:
[2025-11-21 02:18:16] 2025-11-21 07:17:22,313 | INFO     | executing command: cat /etc/os-release
[2025-11-21 02:18:16] 2025-11-21 07:17:22,327 | INFO     | cat /etc/os-release:
[2025-11-21 02:18:16] NAME="CentOS Linux"
[2025-11-21 02:18:16] VERSION="7 (Core)"
[2025-11-21 02:18:16] ID="centos"
[2025-11-21 02:18:16] ID_LIKE="rhel fedora"
[2025-11-21 02:18:16] VERSION_ID="7"
[2025-11-21 02:18:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 02:18:16] ANSI_COLOR="0;31"
[2025-11-21 02:18:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 02:18:16] HOME_URL="https://www.centos.org/"
[2025-11-21 02:18:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 02:18:16] 
[2025-11-21 02:18:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 02:18:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 02:18:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 02:18:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 02:18:16] 
[2025-11-21 02:18:16] 2025-11-21 07:17:22,327 | INFO     | ***************************************
[2025-11-21 02:18:16] 2025-11-21 07:17:22,830 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-21 02:18:16] 2025-11-21 07:17:22,997 | INFO     | sufficient remaining disk space (28242345984 B)
[2025-11-21 02:18:16] 2025-11-21 07:17:22,998 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 02:18:16] 2025-11-21 07:17:22,998 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 02:18:16] 2025-11-21 07:17:22,998 | INFO     | update_server=False
[2025-11-21 02:18:16] 2025-11-21 07:17:22,998 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 02:18:16] 2025-11-21 07:17:22,998 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 02:18:16] 2025-11-21 07:17:22,999 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 02:18:16] 2025-11-21 07:17:23,335 | INFO     | all job control threads have been joined
[2025-11-21 02:18:16] 2025-11-21 07:17:23,341 | INFO     | all payload control threads have been joined
[2025-11-21 02:18:16] 2025-11-21 07:17:23,633 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 02:18:16] 2025-11-21 07:17:23,633 | INFO     | aborting loop
[2025-11-21 02:18:16] 2025-11-21 07:17:23,718 | INFO     | all data control threads have been joined
[2025-11-21 02:18:16] 2025-11-21 07:17:24,004 | INFO     | [job] retrieve thread has finished
[2025-11-21 02:18:16] 2025-11-21 07:17:24,004 | INFO     | [job] queue monitor thread has finished
[2025-11-21 02:18:16] 2025-11-21 07:17:24,110 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 02:18:16] 2025-11-21 07:17:24,130 | INFO     | [data] copytool_in thread has finished
[2025-11-21 02:18:16] 2025-11-21 07:17:24,328 | INFO     | [payload] failed_post thread has finished
[2025-11-21 02:18:16] 2025-11-21 07:17:24,330 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 02:18:16] 2025-11-21 07:17:24,340 | INFO     | [job] control thread has finished
[2025-11-21 02:18:16] 2025-11-21 07:17:24,346 | INFO     | [payload] control thread has finished
[2025-11-21 02:18:16] 2025-11-21 07:17:24,645 | INFO     | [job] job monitor thread has finished
[2025-11-21 02:18:16] 2025-11-21 07:17:24,723 | INFO     | [data] control thread has finished
[2025-11-21 02:18:16] 2025-11-21 07:17:24,864 | INFO     | [job] validate thread has finished
[2025-11-21 02:18:16] 2025-11-21 07:17:25,004 | INFO     | [data] copytool_out thread has finished
[2025-11-21 02:18:16] 2025-11-21 07:17:25,196 | INFO     | [payload] validate_post thread has finished
[2025-11-21 02:18:16] 2025-11-21 07:17:25,300 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 02:18:16] 2025-11-21 07:17:25,398 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 02:18:16] 2025-11-21 07:17:26,188 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 02:18:16] 2025-11-21 07:17:30,194 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 02:18:16] 2025-11-21 07:17:53,521 | INFO     | PID=451 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j
[2025-11-21 02:18:16] 2025-11-21 07:17:53,522 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 02:18:16] 2025-11-21 07:17:53,522 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 02:18:16] 2025-11-21 07:17:53,522 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 02:18:16] 2025-11-21 07:18:09,960 | INFO     | [monitor] cgroup control has ended
[2025-11-21 02:18:16] 2025-11-21 07:18:10,566 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139883780863808)>', '<ExcThread(monitor, started 139883007940352)>']
[2025-11-21 02:18:16] 2025-11-21 07:18:10,609 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 02:18:16] 2025-11-21 07:18:10,609 | INFO     | [monitor] control thread has ended
[2025-11-21 02:18:16] 2025-11-21 07:18:15,583 | INFO     | all workflow threads have been joined
[2025-11-21 02:18:16] 2025-11-21 07:18:16,687 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 02:18:16] 2025-11-21 07:18:16,687 | INFO     | traces error code: 0
[2025-11-21 02:18:16] 2025-11-21 07:18:16,687 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 02:18:16] 2025-11-21 07:18:16,769 [wrapper] ==== pilot stdout END ====
[2025-11-21 02:18:16] 2025-11-21 07:18:16,773 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 02:18:16] 2025-11-21 07:18:16,777 [wrapper] pilotpid: 451
[2025-11-21 02:18:16] 2025-11-21 07:18:16,781 [wrapper] Pilot exit status: 0
[2025-11-21 02:18:16] 2025-11-21 07:18:16,794 [wrapper] pandaids: 6892541303
[2025-11-21 02:18:16] 2025-11-21 07:18:16,841 [wrapper] cleanup supervisor_pilot 22544 452
[2025-11-21 02:18:16] 2025-11-21 07:18:16,845 [wrapper] Test setup, not cleaning
[2025-11-21 02:18:16] 2025-11-21 07:18:16,848 [wrapper] apfmon messages muted
[2025-11-21 02:18:16] 2025-11-21 07:18:16,852 [wrapper] ==== wrapper stdout END ====
[2025-11-21 02:18:16] 2025-11-21 07:18:16,856 [wrapper] ==== wrapper stderr END ====
[2025-11-21 02:18:16]  *** Error codes and diagnostics ***
[2025-11-21 02:18:16]     "exeErrorCode": 0,
[2025-11-21 02:18:16]     "exeErrorDiag": "",
[2025-11-21 02:18:16]     "pilotErrorCode": 0,
[2025-11-21 02:18:16]     "pilotErrorDiag": "",
[2025-11-21 02:18:16]  *** Listing of results directory ***
[2025-11-21 02:18:16] total 1320052
[2025-11-21 02:18:16] -rw-r--r-- 1 boincer umatlas    576529 Nov 19 02:37 pilot3.tar.gz
[2025-11-21 02:18:16] -rw-r--r-- 1 boincer umatlas      5112 Nov 19 02:42 queuedata.json
[2025-11-21 02:18:16] -rwx------ 1 boincer umatlas     36292 Nov 19 02:43 runpilot2-wrapper.sh
[2025-11-21 02:18:16] -rw-r--r-- 1 boincer umatlas       100 Nov 20 19:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 02:18:16] -rwxr-xr-x 1 boincer umatlas      7986 Nov 20 19:00 run_atlas
[2025-11-21 02:18:16] -rw-r--r-- 1 boincer umatlas       105 Nov 20 19:00 job.xml
[2025-11-21 02:18:16] -rw-r--r-- 2 boincer umatlas 409577428 Nov 20 19:00 EVNT.47493027._000248.pool.root.1
[2025-11-21 02:18:16] -rw-r--r-- 2 boincer umatlas     15120 Nov 20 19:00 start_atlas.sh
[2025-11-21 02:18:16] drwxrwx--x 2 boincer umatlas      4096 Nov 20 19:00 shared
[2025-11-21 02:18:16] -rw-r--r-- 2 boincer umatlas    590098 Nov 20 19:00 input.tar.gz
[2025-11-21 02:18:16] -rw-r--r-- 1 boincer umatlas         0 Nov 20 19:00 boinc_lockfile
[2025-11-21 02:18:16] -rw-r--r-- 1 boincer umatlas      2772 Nov 20 19:00 pandaJob.out
[2025-11-21 02:18:16] -rw------- 1 boincer umatlas    989817 Nov 20 19:00 agis_schedconf.cvmfs.json
[2025-11-21 02:18:16] drwx------ 5 boincer umatlas      4096 Nov 20 19:00 pilot3
[2025-11-21 02:18:16] -rw-r--r-- 1 boincer umatlas       533 Nov 21 02:08 boinc_task_state.xml
[2025-11-21 02:18:16] -rw-r--r-- 1 boincer umatlas      5955 Nov 21 02:12 init_data.xml
[2025-11-21 02:18:16] -rw------- 1 boincer umatlas 926557313 Nov 21 02:16 HITS.47493029._002433.pool.root.1
[2025-11-21 02:18:16] -rw------- 1 boincer umatlas      1065 Nov 21 02:17 memory_monitor_summary.json
[2025-11-21 02:18:16] -rw------- 1 boincer umatlas   1526164 Nov 21 02:17 agis_ddmendpoints.agis.ALL.json
[2025-11-21 02:18:16] -rw------- 1 boincer umatlas   2179439 Nov 21 02:17 log.47493029._002433.job.log.tgz.1
[2025-11-21 02:18:16] -rw------- 1 boincer umatlas      8662 Nov 21 02:17 heartbeat.json
[2025-11-21 02:18:16] -rw------- 1 boincer umatlas        95 Nov 21 02:17 pilot_heartbeat.json
[2025-11-21 02:18:16] -rw-r--r-- 1 boincer umatlas        29 Nov 21 02:18 wrapper_checkpoint.txt
[2025-11-21 02:18:16] -rw-r--r-- 1 boincer umatlas      8192 Nov 21 02:18 boinc_mmap_file
[2025-11-21 02:18:16] -rw------- 1 boincer umatlas      4744 Nov 21 02:18 pilotlog.txt
[2025-11-21 02:18:16] -rw------- 1 boincer umatlas   3657281 Nov 21 02:18 log.47493029._002433.job.log.1
[2025-11-21 02:18:16] -rw------- 1 boincer umatlas       353 Nov 21 02:18 output.list
[2025-11-21 02:18:16] -rw-r--r-- 1 boincer umatlas       620 Nov 21 02:18 runtime_log
[2025-11-21 02:18:16] -rw------- 1 boincer umatlas   5857280 Nov 21 02:18 result.tar.gz
[2025-11-21 02:18:16] -rw-r--r-- 1 boincer umatlas      8706 Nov 21 02:18 runtime_log.err
[2025-11-21 02:18:16] -rw------- 1 boincer umatlas       670 Nov 21 02:18 KB3NDmP1rf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmIwGKDmQ73yWm.diag
[2025-11-21 02:18:16] -rw-r--r-- 1 boincer umatlas     21309 Nov 21 02:18 stderr.txt
[2025-11-21 02:18:17] HITS file was successfully produced:
[2025-11-21 02:18:17] -rw------- 1 boincer umatlas 926557313 Nov 21 02:16 shared/HITS.pool.root.1
[2025-11-21 02:18:17]  *** Contents of shared directory: ***
[2025-11-21 02:18:17] total 1311148
[2025-11-21 02:18:17] -rw-r--r-- 2 boincer umatlas 409577428 Nov 20 19:00 ATLAS.root_0
[2025-11-21 02:18:17] -rw-r--r-- 2 boincer umatlas     15120 Nov 20 19:00 start_atlas.sh
[2025-11-21 02:18:17] -rw-r--r-- 2 boincer umatlas    590098 Nov 20 19:00 input.tar.gz
[2025-11-21 02:18:17] -rw------- 1 boincer umatlas 926557313 Nov 21 02:16 HITS.pool.root.1
[2025-11-21 02:18:17] -rw------- 1 boincer umatlas   5857280 Nov 21 02:18 result.tar.gz
02:18:19 (29217): run_atlas exited; CPU time 293781.173081
02:18:19 (29217): called boinc_finish(0)

</stderr_txt>
]]>

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