Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:08:02 (2347209): wrapper (7.7.26015): starting
07:08:02 (2347209): wrapper: running run_atlas (--nthreads 4)
[2025-11-23 07:08:02] Arguments: --nthreads 4
[2025-11-23 07:08:02] Threads: 4
[2025-11-23 07:08:02] Checking for CVMFS
[2025-11-23 07:08:02] No cvmfs_config command found, will try listing directly
[2025-11-23 07:08:02] CVMFS is ok
[2025-11-23 07:08:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 07:08:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 07:08:02] Further information can be found at the LHC@home message board.
[2025-11-23 07:08:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 07:08:02] Checking for apptainer binary...
[2025-11-23 07:08:02] which: no apptainer in ((null))
[2025-11-23 07:08:02] apptainer is not installed, using version from CVMFS
[2025-11-23 07:08:02] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 07:08:02] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut09.grid.cesnet.cz
[2025-11-23 07:08:02] apptainer works
[2025-11-23 07:08:02] Set ATHENA_PROC_NUMBER=4
[2025-11-23 07:08:02] Set ATHENA_CORE_NUMBER=4
[2025-11-23 07:08:02] Starting ATLAS job with PandaID=6893862601
[2025-11-23 07:08:02] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 00:30:07]  *** The last 200 lines of the pilot log: ***
[2025-11-24 00:30:07] 2025-11-23 23:24:04,707 | INFO     | monitor loop #4458: job 0:6893862601 is in state 'finished'
[2025-11-24 00:30:07] 2025-11-23 23:24:04,707 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 00:30:07] 2025-11-23 23:24:05,625 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-24 00:30:07] 2025-11-23 23:24:05,635 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2637.7158125000005
[2025-11-24 00:30:07] 2025-11-23 23:24:05,648 | INFO     | using path: /scratch/boinc/var/slot52/slots/0/PanDA_Pilot-6893862601/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 00:30:07] 2025-11-23 23:24:05,650 | INFO     | extracted standard info from prmon json
[2025-11-24 00:30:07] 2025-11-23 23:24:05,650 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 00:30:07] 2025-11-23 23:24:05,650 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 00:30:07] 2025-11-23 23:24:05,669 | INFO     | fitting pss+swap vs Time
[2025-11-24 00:30:07] 2025-11-23 23:24:05,670 | INFO     | sum of square deviations: 328095790356.9911
[2025-11-24 00:30:07] 2025-11-23 23:24:05,692 | INFO     | sum of deviations: 844664381812.9614
[2025-11-24 00:30:07] 2025-11-23 23:24:05,692 | INFO     | mean x: 1763909171.002944
[2025-11-24 00:30:07] 2025-11-23 23:24:05,693 | INFO     | mean y: 2276802.0127576054
[2025-11-24 00:30:07] 2025-11-23 23:24:05,693 | INFO     | intersect: -4538809348.096904
[2025-11-24 00:30:07] 2025-11-23 23:24:05,694 | INFO     | chi2: 4.211205666150494
[2025-11-24 00:30:07] 2025-11-23 23:24:05,695 | INFO     | sum of square deviations: 323289775579.4912
[2025-11-24 00:30:07] 2025-11-23 23:24:05,717 | INFO     | sum of deviations: 1064746242242.146
[2025-11-24 00:30:07] 2025-11-23 23:24:05,717 | INFO     | mean x: 1763909018.5029585
[2025-11-24 00:30:07] 2025-11-23 23:24:05,717 | INFO     | mean y: 2283780.450690335
[2025-11-24 00:30:07] 2025-11-23 23:24:05,717 | INFO     | intersect: -5807103465.841179
[2025-11-24 00:30:07] 2025-11-23 23:24:05,719 | INFO     | chi2: 1.9250436577797128
[2025-11-24 00:30:07] 2025-11-23 23:24:05,719 | INFO     | current chi2=1.9250436577797128 (change=54.287588629234186 %)
[2025-11-24 00:30:07] 2025-11-23 23:24:05,720 | INFO     | sum of square deviations: 318530924476.991
[2025-11-24 00:30:07] 2025-11-23 23:24:05,741 | INFO     | sum of deviations: 1102443731745.7556
[2025-11-24 00:30:07] 2025-11-23 23:24:05,741 | INFO     | mean x: 1763908866.0029733
[2025-11-24 00:30:07] 2025-11-23 23:24:05,741 | INFO     | mean y: 2284986.081268583
[2025-11-24 00:30:07] 2025-11-23 23:24:05,742 | INFO     | intersect: -6102649019.584515
[2025-11-24 00:30:07] 2025-11-23 23:24:05,743 | INFO     | chi2: 1.7876045575959445
[2025-11-24 00:30:07] 2025-11-23 23:24:05,743 | INFO     | current chi2=1.7876045575959445 (change=7.1395315959891725 %)
[2025-11-24 00:30:07] 2025-11-23 23:24:05,743 | INFO     | right removable region: 1008
[2025-11-24 00:30:07] 2025-11-23 23:24:05,745 | INFO     | sum of square deviations: 323289773749.4912
[2025-11-24 00:30:07] 2025-11-23 23:24:05,766 | INFO     | sum of deviations: 668710372886.5326
[2025-11-24 00:30:07] 2025-11-23 23:24:05,767 | INFO     | mean x: 1763909323.5029585
[2025-11-24 00:30:07] 2025-11-23 23:24:05,767 | INFO     | mean y: 2282375.6558185406
[2025-11-24 00:30:07] 2025-11-23 23:24:05,767 | INFO     | intersect: -3646284814.631162
[2025-11-24 00:30:07] 2025-11-23 23:24:05,768 | INFO     | chi2: 2.5424898982322333
[2025-11-24 00:30:07] 2025-11-23 23:24:05,768 | INFO     | current chi2=2.5424898982322333 (change=39.6256060664843 %)
[2025-11-24 00:30:07] 2025-11-23 23:24:05,770 | INFO     | sum of square deviations: 318530920816.99097
[2025-11-24 00:30:07] 2025-11-23 23:24:05,792 | INFO     | sum of deviations: 631585965037.771
[2025-11-24 00:30:07] 2025-11-23 23:24:05,792 | INFO     | mean x: 1763909476.0029733
[2025-11-24 00:30:07] 2025-11-23 23:24:05,792 | INFO     | mean y: 2283564.743310208
[2025-11-24 00:30:07] 2025-11-23 23:24:05,792 | INFO     | intersect: -3495211955.575988
[2025-11-24 00:30:07] 2025-11-23 23:24:05,794 | INFO     | chi2: 2.5120519772495946
[2025-11-24 00:30:07] 2025-11-23 23:24:05,794 | INFO     | current chi2=2.5120519772495946 (change=1.1971697902832108 %)
[2025-11-24 00:30:07] 2025-11-23 23:24:05,794 | INFO     | left removable region: 20
[2025-11-24 00:30:07] 2025-11-23 23:24:05,795 | INFO     | sum of square deviations: 299053521386.9957
[2025-11-24 00:30:07] 2025-11-23 23:24:05,796 | INFO     | time since job start (62152s) is within the limit (172800.0s)
[2025-11-24 00:30:07] 2025-11-23 23:24:05,817 | INFO     | sum of deviations: 835190957015.3612
[2025-11-24 00:30:07] 2025-11-23 23:24:05,817 | INFO     | mean x: 1763909445.5030365
[2025-11-24 00:30:07] 2025-11-23 23:24:05,817 | INFO     | mean y: 2293462.379554656
[2025-11-24 00:30:07] 2025-11-23 23:24:05,817 | INFO     | intersect: -4923919113.367691
[2025-11-24 00:30:07] 2025-11-23 23:24:05,819 | INFO     | chi2: 0.06738983569983213
[2025-11-24 00:30:07] 2025-11-23 23:24:05,819 | INFO     | current memory leak: 2.79 B/s (using 988 data points, chi2=0.07)
[2025-11-24 00:30:07] 2025-11-23 23:24:05,820 | INFO     | could have reported an average CPU frequency of 2579 MHz (38 samples)
[2025-11-24 00:30:07] 2025-11-23 23:24:05,820 | INFO     | ..............................
[2025-11-24 00:30:07] 2025-11-23 23:24:05,820 | INFO     | . Timing measurements:
[2025-11-24 00:30:07] 2025-11-23 23:24:05,820 | INFO     | . get job = 0 s
[2025-11-24 00:30:07] 2025-11-23 23:24:05,820 | INFO     | . initial setup = 1 s
[2025-11-24 00:30:07] 2025-11-23 23:24:05,820 | INFO     | . payload setup = 6 s
[2025-11-24 00:30:07] 2025-11-23 23:24:05,821 | INFO     | . stage-in = 0 s
[2025-11-24 00:30:07] 2025-11-23 23:24:05,821 | INFO     | . payload execution = 62115 s
[2025-11-24 00:30:07] 2025-11-23 23:24:05,821 | INFO     | . stage-out = 2 s
[2025-11-24 00:30:07] 2025-11-23 23:24:05,821 | INFO     | . log creation = 0 s
[2025-11-24 00:30:07] 2025-11-23 23:24:05,821 | INFO     | ..............................
[2025-11-24 00:30:07] 2025-11-23 23:24:06,178 | INFO     | 
[2025-11-24 00:30:07] 2025-11-23 23:24:06,179 | INFO     | job summary report
[2025-11-24 00:30:07] 2025-11-23 23:24:06,179 | INFO     | --------------------------------------------------
[2025-11-24 00:30:07] 2025-11-23 23:24:06,179 | INFO     | PanDA job id: 6893862601
[2025-11-24 00:30:07] 2025-11-23 23:24:06,179 | INFO     | task id: 47523449
[2025-11-24 00:30:07] 2025-11-23 23:24:06,179 | INFO     | errors: (none)
[2025-11-24 00:30:07] 2025-11-23 23:24:06,179 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 00:30:07] 2025-11-23 23:24:06,179 | INFO     | pilot state: finished 
[2025-11-24 00:30:07] 2025-11-23 23:24:06,179 | INFO     | transexitcode: 0
[2025-11-24 00:30:07] 2025-11-23 23:24:06,179 | INFO     | exeerrorcode: 0
[2025-11-24 00:30:07] 2025-11-23 23:24:06,179 | INFO     | exeerrordiag: 
[2025-11-24 00:30:07] 2025-11-23 23:24:06,179 | INFO     | exitcode: 0
[2025-11-24 00:30:07] 2025-11-23 23:24:06,179 | INFO     | exitmsg: OK
[2025-11-24 00:30:07] 2025-11-23 23:24:06,180 | INFO     | cpuconsumptiontime: 245677 s
[2025-11-24 00:30:07] 2025-11-23 23:24:06,180 | INFO     | nevents: 1000
[2025-11-24 00:30:07] 2025-11-23 23:24:06,180 | INFO     | neventsw: 0
[2025-11-24 00:30:07] 2025-11-23 23:24:06,180 | INFO     | pid: 2358371
[2025-11-24 00:30:07] 2025-11-23 23:24:06,180 | INFO     | pgrp: 2358371
[2025-11-24 00:30:07] 2025-11-23 23:24:06,180 | INFO     | corecount: 4
[2025-11-24 00:30:07] 2025-11-23 23:24:06,180 | INFO     | event service: False
[2025-11-24 00:30:07] 2025-11-23 23:24:06,180 | INFO     | sizes: {0: 2298817, 1: 2298817, 5: 2299107, 11: 2299163, 62125: 2352092, 62128: 2361292, 62136: 2361482}
[2025-11-24 00:30:07] 2025-11-23 23:24:06,180 | INFO     | --------------------------------------------------
[2025-11-24 00:30:07] 2025-11-23 23:24:06,180 | INFO     | 
[2025-11-24 00:30:07] 2025-11-23 23:24:06,180 | INFO     | executing command: ls -lF /scratch/boinc/var/slot52/slots/0
[2025-11-24 00:30:07] 2025-11-23 23:24:06,202 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 00:30:07] 2025-11-23 23:24:06,202 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 00:30:07] 2025-11-23 23:24:06,202 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 00:30:07] 2025-11-23 23:24:06,202 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 00:30:07] 2025-11-23 23:24:06,202 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 00:30:07] 2025-11-23 23:24:06,203 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 00:30:07] 2025-11-23 23:24:06,203 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 00:30:07] 2025-11-23 23:24:06,203 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 00:30:07] 2025-11-23 23:24:06,203 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 00:30:07] 2025-11-23 23:24:06,203 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 00:30:07] 2025-11-23 23:24:06,203 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 00:30:07] 2025-11-23 23:24:06,203 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 00:30:07] 2025-11-23 23:24:06,203 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 00:30:07] 2025-11-23 23:24:06,203 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 00:30:07] 2025-11-23 23:24:06,203 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 00:30:07] 2025-11-23 23:24:06,204 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 00:30:07] 2025-11-23 23:24:06,204 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 00:30:07] 2025-11-23 23:24:06,204 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 00:30:07] 2025-11-23 23:24:06,204 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 00:30:07] 2025-11-23 23:24:06,204 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 00:30:07] 2025-11-23 23:24:06,204 | INFO     | job 6893862601 has completed (purged errors)
[2025-11-24 00:30:07] 2025-11-23 23:24:06,204 | INFO     | overall cleanup function is called
[2025-11-24 00:30:07] 2025-11-23 23:24:07,219 | INFO     | --- collectZombieJob: --- 10, [2358371]
[2025-11-24 00:30:07] 2025-11-23 23:24:07,219 | INFO     | zombie collector waiting for pid 2358371
[2025-11-24 00:30:07] 2025-11-23 23:24:07,219 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 00:30:07] 2025-11-23 23:24:07,219 | INFO     | collected zombie processes
[2025-11-24 00:30:07] 2025-11-23 23:24:07,219 | INFO     | will attempt to kill all subprocesses of pid=2358371
[2025-11-24 00:30:07] 2025-11-23 23:24:07,634 | INFO     | process IDs to be killed: [2358371] (in reverse order)
[2025-11-24 00:30:07] 2025-11-23 23:24:07,757 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 00:30:07] 2025-11-23 23:24:07,758 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 00:30:07] 2025-11-23 23:24:07,771 | INFO     | did not find any defunct processes belonging to 2358371
[2025-11-24 00:30:07] 2025-11-23 23:24:07,784 | INFO     | did not find any defunct processes belonging to 2358371
[2025-11-24 00:30:07] 2025-11-23 23:24:07,785 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 00:30:07] 2025-11-23 23:24:07,786 | INFO     | ready for new job
[2025-11-24 00:30:07] 2025-11-23 23:24:07,786 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 00:30:07] 2025-11-23 23:24:07,791 | INFO     | ***************************************
[2025-11-24 00:30:07] 2025-11-23 23:24:07,792 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 00:30:07] 2025-11-23 23:24:07,792 | INFO     | ***************************************
[2025-11-24 00:30:07] 2025-11-23 23:24:07,792 | INFO     | 
[2025-11-24 00:30:07] 2025-11-23 23:24:07,796 | INFO     | architecture information:
[2025-11-24 00:30:07] 2025-11-23 23:24:07,797 | INFO     | executing command: cat /etc/os-release
[2025-11-24 00:30:07] 2025-11-23 23:24:07,813 | INFO     | cat /etc/os-release:
[2025-11-24 00:30:07] NAME="CentOS Linux"
[2025-11-24 00:30:07] VERSION="7 (Core)"
[2025-11-24 00:30:07] ID="centos"
[2025-11-24 00:30:07] ID_LIKE="rhel fedora"
[2025-11-24 00:30:07] VERSION_ID="7"
[2025-11-24 00:30:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 00:30:07] ANSI_COLOR="0;31"
[2025-11-24 00:30:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 00:30:07] HOME_URL="https://www.centos.org/"
[2025-11-24 00:30:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 00:30:07] 
[2025-11-24 00:30:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 00:30:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 00:30:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 00:30:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 00:30:07] 
[2025-11-24 00:30:07] 2025-11-23 23:24:07,813 | INFO     | ***************************************
[2025-11-24 00:30:07] 2025-11-23 23:24:08,316 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/0
[2025-11-24 00:30:07] 2025-11-23 23:24:08,335 | INFO     | sufficient remaining disk space (680352808960 B)
[2025-11-24 00:30:07] 2025-11-23 23:24:08,336 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 00:30:07] 2025-11-23 23:24:08,336 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 00:30:07] 2025-11-23 23:24:08,336 | INFO     | update_server=False
[2025-11-24 00:30:07] 2025-11-23 23:24:08,336 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 00:30:07] 2025-11-23 23:24:08,336 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 00:30:07] 2025-11-23 23:24:08,337 | INFO     | aborting loop
[2025-11-24 00:30:07] 2025-11-23 23:24:08,343 | INFO     | all job control threads have been joined
[2025-11-24 00:30:07] 2025-11-23 23:24:08,477 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 00:30:07] 2025-11-23 23:24:08,557 | INFO     | all payload control threads have been joined
[2025-11-24 00:30:07] 2025-11-23 23:24:08,587 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 00:30:07] 2025-11-23 23:24:09,014 | INFO     | all data control threads have been joined
[2025-11-24 00:30:07] 2025-11-23 23:24:09,341 | INFO     | [job] retrieve thread has finished
[2025-11-24 00:30:07] 2025-11-23 23:24:09,342 | INFO     | [job] job monitor thread has finished
[2025-11-24 00:30:07] 2025-11-23 23:24:09,348 | INFO     | [job] control thread has finished
[2025-11-24 00:30:07] 2025-11-23 23:24:09,562 | INFO     | [payload] control thread has finished
[2025-11-24 00:30:07] 2025-11-23 23:24:09,568 | INFO     | [payload] failed_post thread has finished
[2025-11-24 00:30:07] 2025-11-23 23:24:09,656 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 00:30:07] 2025-11-23 23:24:09,898 | INFO     | [job] validate thread has finished
[2025-11-24 00:30:07] 2025-11-23 23:24:09,918 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 00:30:07] 2025-11-23 23:24:10,020 | INFO     | [data] control thread has finished
[2025-11-24 00:30:07] 2025-11-23 23:24:10,029 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 00:30:07] 2025-11-23 23:24:10,411 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 00:30:07] 2025-11-23 23:24:10,440 | INFO     | [data] copytool_in thread has finished
[2025-11-24 00:30:07] 2025-11-23 23:24:10,481 | INFO     | [data] copytool_out thread has finished
[2025-11-24 00:30:07] 2025-11-23 23:24:10,797 | INFO     | [payload] validate_post thread has finished
[2025-11-24 00:30:07] 2025-11-23 23:24:10,935 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 00:30:07] 2025-11-23 23:24:11,940 | INFO     | [job] queue monitor thread has finished
[2025-11-24 00:30:07] 2025-11-23 23:24:12,593 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 00:30:07] 2025-11-23 23:24:39,379 | INFO     | PID=2350975 has CPU usage=8.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 00:30:07] 2025-11-23 23:24:39,379 | INFO     | .. there are 5 such processes running
[2025-11-24 00:30:07] 2025-11-23 23:24:39,379 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 00:30:07] 2025-11-23 23:24:39,379 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 00:30:07] 2025-11-23 23:24:39,379 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 00:30:07] 2025-11-23 23:24:54,498 | INFO     | [monitor] cgroup control has ended
[2025-11-24 00:30:07] 2025-11-23 23:24:56,437 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23025524369216)>', '<ExcThread(monitor, started 23025288185600)>']
[2025-11-24 00:30:07] 2025-11-23 23:24:56,453 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 00:30:07] 2025-11-23 23:24:56,453 | INFO     | [monitor] control thread has ended
[2025-11-24 00:30:07] 2025-11-23 23:25:01,462 | INFO     | all workflow threads have been joined
[2025-11-24 00:30:07] 2025-11-23 23:25:01,462 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 00:30:07] 2025-11-23 23:25:01,462 | INFO     | traces error code: 0
[2025-11-24 00:30:07] 2025-11-23 23:25:01,463 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 00:30:07] 2025-11-23 23:25:01,621 [wrapper] ==== pilot stdout END ====
[2025-11-24 00:30:07] 2025-11-23 23:25:01,624 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 00:30:07] 2025-11-23 23:25:01,627 [wrapper] pilotpid: 2350975
[2025-11-24 00:30:07] 2025-11-23 23:25:01,629 [wrapper] Pilot exit status: 0
[2025-11-24 00:30:07] 2025-11-23 23:25:01,640 [wrapper] pandaids: 6893862601
[2025-11-24 00:30:07] 2025-11-23 23:25:01,717 [wrapper] cleanup supervisor_pilot 3334259 2350976
[2025-11-24 00:30:07] 2025-11-23 23:25:01,721 [wrapper] Test setup, not cleaning
[2025-11-24 00:30:07] 2025-11-23 23:25:01,724 [wrapper] apfmon messages muted
[2025-11-24 00:30:07] 2025-11-23 23:25:01,727 [wrapper] ==== wrapper stdout END ====
[2025-11-24 00:30:07] 2025-11-23 23:25:01,729 [wrapper] ==== wrapper stderr END ====
[2025-11-24 00:30:07]  *** Error codes and diagnostics ***
[2025-11-24 00:30:07]     "exeErrorCode": 0,
[2025-11-24 00:30:07]     "exeErrorDiag": "",
[2025-11-24 00:30:07]     "pilotErrorCode": 0,
[2025-11-24 00:30:07]     "pilotErrorDiag": "",
[2025-11-24 00:30:07]  *** Listing of results directory ***
[2025-11-24 00:30:07] total 1317012
[2025-11-24 00:30:07] -rw-r--r-- 1 boinc boinc    576529 Nov 20 15:06 pilot3.tar.gz
[2025-11-24 00:30:07] -rw-r--r-- 1 boinc boinc      5112 Nov 20 15:13 queuedata.json
[2025-11-24 00:30:07] -rwx------ 1 boinc boinc     36292 Nov 20 15:14 runpilot2-wrapper.sh
[2025-11-24 00:30:07] -rw-r--r-- 1 boinc boinc       100 Nov 23 07:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 00:30:07] -rwxr-xr-x 1 boinc boinc      7986 Nov 23 07:07 run_atlas
[2025-11-24 00:30:07] -rw-r--r-- 1 boinc boinc       105 Nov 23 07:07 job.xml
[2025-11-24 00:30:07] -rw-r--r-- 1 boinc boinc      6633 Nov 23 07:08 init_data.xml
[2025-11-24 00:30:07] -rw-r--r-- 2 boinc boinc 409612112 Nov 23 07:08 EVNT.47493127._000593.pool.root.1
[2025-11-24 00:30:07] -rw-r--r-- 2 boinc boinc     15847 Nov 23 07:08 start_atlas.sh
[2025-11-24 00:30:07] drwxrwx--x 2 boinc boinc      4096 Nov 23 07:08 shared
[2025-11-24 00:30:07] -rw-r--r-- 2 boinc boinc    590105 Nov 23 07:08 input.tar.gz
[2025-11-24 00:30:07] -rw-r--r-- 1 boinc boinc         0 Nov 23 07:08 boinc_lockfile
[2025-11-24 00:30:07] -rw-r--r-- 1 boinc boinc      2785 Nov 23 07:08 pandaJob.out
[2025-11-24 00:30:07] -rw------- 1 boinc boinc    989784 Nov 23 07:08 agis_schedconf.cvmfs.json
[2025-11-24 00:30:07] drwx------ 5 boinc boinc      4096 Nov 23 07:08 pilot3
[2025-11-24 00:30:07] -rw-r--r-- 1 boinc boinc       531 Nov 24 00:15 boinc_task_state.xml
[2025-11-24 00:30:07] -rw------- 1 boinc boinc 914150219 Nov 24 00:23 HITS.47523449._005930.pool.root.1
[2025-11-24 00:30:07] -rw------- 1 boinc boinc        95 Nov 24 00:23 pilot_heartbeat.json
[2025-11-24 00:30:07] -rw------- 1 boinc boinc      1046 Nov 24 00:23 memory_monitor_summary.json
[2025-11-24 00:30:07] -rw------- 1 boinc boinc   1526164 Nov 24 00:23 agis_ddmendpoints.agis.ALL.json
[2025-11-24 00:30:07] -rw------- 1 boinc boinc   1754465 Nov 24 00:23 log.47523449._005930.job.log.tgz.1
[2025-11-24 00:30:07] -rw------- 1 boinc boinc      8626 Nov 24 00:24 heartbeat.json
[2025-11-24 00:30:07] -rw------- 1 boinc boinc      4833 Nov 24 00:25 pilotlog.txt
[2025-11-24 00:30:07] -rw------- 1 boinc boinc   8716115 Nov 24 00:25 log.47523449._005930.job.log.1
[2025-11-24 00:30:07] -rw------- 1 boinc boinc       353 Nov 24 00:25 output.list
[2025-11-24 00:30:07] -rw-r--r-- 1 boinc boinc       620 Nov 24 00:25 runtime_log
[2025-11-24 00:30:07] -rw------- 1 boinc boinc  10485760 Nov 24 00:25 result.tar.gz
[2025-11-24 00:30:07] -rw-r--r-- 1 boinc boinc      9206 Nov 24 00:25 runtime_log.err
[2025-11-24 00:30:07] -rw------- 1 boinc boinc       671 Nov 24 00:25 UxMMDmNbKg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmK3HKDmAdM7Mm.diag
[2025-11-24 00:30:07] -rw-r--r-- 1 boinc boinc        28 Nov 24 00:29 wrapper_checkpoint.txt
[2025-11-24 00:30:07] -rw-r--r-- 1 boinc boinc      8192 Nov 24 00:30 boinc_mmap_file
[2025-11-24 00:30:07] -rw-r--r-- 1 boinc boinc     21105 Nov 24 00:30 stderr.txt
[2025-11-24 00:30:07] HITS file was successfully produced:
[2025-11-24 00:30:07] -rw------- 1 boinc boinc 914150219 Nov 24 00:23 shared/HITS.pool.root.1
[2025-11-24 00:30:07]  *** Contents of shared directory: ***
[2025-11-24 00:30:07] total 1303584
[2025-11-24 00:30:07] -rw-r--r-- 2 boinc boinc 409612112 Nov 23 07:08 ATLAS.root_0
[2025-11-24 00:30:07] -rw-r--r-- 2 boinc boinc     15847 Nov 23 07:08 start_atlas.sh
[2025-11-24 00:30:07] -rw-r--r-- 2 boinc boinc    590105 Nov 23 07:08 input.tar.gz
[2025-11-24 00:30:07] -rw------- 1 boinc boinc 914150219 Nov 24 00:23 HITS.pool.root.1
[2025-11-24 00:30:07] -rw------- 1 boinc boinc  10485760 Nov 24 00:25 result.tar.gz
00:30:09 (2347209): run_atlas exited; CPU time 248007.253318
00:30:09 (2347209): called boinc_finish(0)

</stderr_txt>
]]>

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