Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
19:00:52 (21810): wrapper (7.7.26015): starting
19:00:52 (21810): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 19:00:52] Arguments: --nthreads 8
[2025-11-20 19:00:52] Threads: 8
[2025-11-20 19:00:52] Checking for CVMFS
[2025-11-20 19:00:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 19:00:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 19:00:53] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 19:00:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 19:00:53] 2.11.2.0 2860 57766 80364 153101 3 82 18118899 20275201 1 130560 0 13370782 99.807 3699040 30001 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-20 19:00:53] CVMFS is ok
[2025-11-20 19:00:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 19:00:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 19:00:53] Further information can be found at the LHC@home message board.
[2025-11-20 19:00:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 19:00:53] Checking for apptainer binary...
[2025-11-20 19:00:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 19:00:53] Running /usr/bin/apptainer --version
[2025-11-20 19:00:53] apptainer version 1.3.2-1.el7
[2025-11-20 19:00:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 19:00:55] c-204-9.aglt2.org
[2025-11-20 19:00:55] apptainer works
[2025-11-20 19:00:55] Set ATHENA_PROC_NUMBER=8
[2025-11-20 19:00:55] Set ATHENA_CORE_NUMBER=8
[2025-11-20 19:00:55] Starting ATLAS job with PandaID=6893839068
[2025-11-20 19:00:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 09:08:57]  *** The last 200 lines of the pilot log: ***
[2025-11-21 09:08:57] 2025-11-21 14:08:23,862 | INFO     | time since job start (50830s) is within the limit (172800.0s)
[2025-11-21 09:08:57] 2025-11-21 14:08:23,942 | INFO     | monitor loop #3764: job 0:6893839068 is in state 'finished'
[2025-11-21 09:08:57] 2025-11-21 14:08:23,950 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 09:08:57] 2025-11-21 14:08:25,338 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-21 09:08:57] 2025-11-21 14:08:25,342 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.875
[2025-11-21 09:08:57] 2025-11-21 14:08:25,344 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6893839068/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 09:08:57] 2025-11-21 14:08:25,344 | INFO     | extracted standard info from prmon json
[2025-11-21 09:08:57] 2025-11-21 14:08:25,345 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 09:08:57] 2025-11-21 14:08:25,345 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 09:08:57] 2025-11-21 14:08:25,360 | INFO     | fitting pss+swap vs Time
[2025-11-21 09:08:57] 2025-11-21 14:08:25,361 | INFO     | sum of square deviations: 179230904922.94147
[2025-11-21 09:08:57] 2025-11-21 14:08:25,376 | INFO     | sum of deviations: 1134055115743.6895
[2025-11-21 09:08:57] 2025-11-21 14:08:25,376 | INFO     | mean x: 1763708682.0084033
[2025-11-21 09:08:57] 2025-11-21 14:08:25,376 | INFO     | mean y: 2873409.18727491
[2025-11-21 09:08:57] 2025-11-21 14:08:25,376 | INFO     | intersect: -11156713462.13456
[2025-11-21 09:08:57] 2025-11-21 14:08:25,377 | INFO     | chi2: 5.75350340737695
[2025-11-21 09:08:57] 2025-11-21 14:08:25,378 | INFO     | sum of square deviations: 176022791092.94086
[2025-11-21 09:08:57] 2025-11-21 14:08:25,392 | INFO     | sum of deviations: 1400214780577.2283
[2025-11-21 09:08:57] 2025-11-21 14:08:25,392 | INFO     | mean x: 1763708529.508454
[2025-11-21 09:08:57] 2025-11-21 14:08:25,392 | INFO     | mean y: 2886053.6811594204
[2025-11-21 09:08:57] 2025-11-21 14:08:25,393 | INFO     | intersect: -14026949152.965012
[2025-11-21 09:08:57] 2025-11-21 14:08:25,393 | INFO     | chi2: 2.7483088636948954
[2025-11-21 09:08:57] 2025-11-21 14:08:25,394 | INFO     | current chi2=2.7483088636948954 (change=52.23242832930097 %)
[2025-11-21 09:08:57] 2025-11-21 14:08:25,394 | INFO     | sum of square deviations: 172853189612.94037
[2025-11-21 09:08:57] 2025-11-21 14:08:25,409 | INFO     | sum of deviations: 1497119906920.5737
[2025-11-21 09:08:57] 2025-11-21 14:08:25,409 | INFO     | mean x: 1763708377.0085056
[2025-11-21 09:08:57] 2025-11-21 14:08:25,409 | INFO     | mean y: 2890710.7752126367
[2025-11-21 09:08:57] 2025-11-21 14:08:25,409 | INFO     | intersect: -15272979680.362392
[2025-11-21 09:08:57] 2025-11-21 14:08:25,410 | INFO     | chi2: 2.217958845003482
[2025-11-21 09:08:57] 2025-11-21 14:08:25,410 | INFO     | current chi2=2.217958845003482 (change=19.297322280524078 %)
[2025-11-21 09:08:57] 2025-11-21 14:08:25,410 | INFO     | right removable region: 822
[2025-11-21 09:08:57] 2025-11-21 14:08:25,411 | INFO     | sum of square deviations: 176022786822.94086
[2025-11-21 09:08:57] 2025-11-21 14:08:25,425 | INFO     | sum of deviations: 919892579587.0522
[2025-11-21 09:08:57] 2025-11-21 14:08:25,425 | INFO     | mean x: 1763708834.508454
[2025-11-21 09:08:57] 2025-11-21 14:08:25,425 | INFO     | mean y: 2883574.1352657005
[2025-11-21 09:08:57] 2025-11-21 14:08:25,426 | INFO     | intersect: -9214233701.984388
[2025-11-21 09:08:57] 2025-11-21 14:08:25,428 | INFO     | chi2: 3.779999348557941
[2025-11-21 09:08:57] 2025-11-21 14:08:25,428 | INFO     | current chi2=3.779999348557941 (change=34.300910577173696 %)
[2025-11-21 09:08:57] 2025-11-21 14:08:25,429 | INFO     | sum of square deviations: 172853181072.94037
[2025-11-21 09:08:57] 2025-11-21 14:08:25,444 | INFO     | sum of deviations: 872861435715.7894
[2025-11-21 09:08:57] 2025-11-21 14:08:25,444 | INFO     | mean x: 1763708987.0085056
[2025-11-21 09:08:57] 2025-11-21 14:08:25,444 | INFO     | mean y: 2885835.8869987847
[2025-11-21 09:08:57] 2025-11-21 14:08:25,445 | INFO     | intersect: -8903363670.365707
[2025-11-21 09:08:57] 2025-11-21 14:08:25,445 | INFO     | chi2: 3.746568617772074
[2025-11-21 09:08:57] 2025-11-21 14:08:25,446 | INFO     | current chi2=3.746568617772074 (change=0.8844110197696391 %)
[2025-11-21 09:08:57] 2025-11-21 14:08:25,446 | INFO     | left removable region: 20
[2025-11-21 09:08:57] 2025-11-21 14:08:25,447 | INFO     | sum of square deviations: 159956152708.439
[2025-11-21 09:08:57] 2025-11-21 14:08:25,460 | INFO     | sum of deviations: 1156328043067.0356
[2025-11-21 09:08:57] 2025-11-21 14:08:25,460 | INFO     | mean x: 1763708956.5087283
[2025-11-21 09:08:57] 2025-11-21 14:08:25,460 | INFO     | mean y: 2907572.4950124687
[2025-11-21 09:08:57] 2025-11-21 14:08:25,460 | INFO     | intersect: -12746999772.031565
[2025-11-21 09:08:57] 2025-11-21 14:08:25,461 | INFO     | chi2: 0.15868034996566077
[2025-11-21 09:08:57] 2025-11-21 14:08:25,461 | INFO     | current memory leak: 7.23 B/s (using 802 data points, chi2=0.16)
[2025-11-21 09:08:57] 2025-11-21 14:08:25,462 | INFO     | could have reported an average CPU frequency of 2188 MHz (31 samples)
[2025-11-21 09:08:57] 2025-11-21 14:08:25,462 | INFO     | ..............................
[2025-11-21 09:08:57] 2025-11-21 14:08:25,462 | INFO     | . Timing measurements:
[2025-11-21 09:08:57] 2025-11-21 14:08:25,462 | INFO     | . get job = 0 s
[2025-11-21 09:08:57] 2025-11-21 14:08:25,463 | INFO     | . initial setup = 2 s
[2025-11-21 09:08:57] 2025-11-21 14:08:25,463 | INFO     | . payload setup = 9 s
[2025-11-21 09:08:57] 2025-11-21 14:08:25,463 | INFO     | . stage-in = 0 s
[2025-11-21 09:08:57] 2025-11-21 14:08:25,463 | INFO     | . payload execution = 50787 s
[2025-11-21 09:08:57] 2025-11-21 14:08:25,463 | INFO     | . stage-out = 3 s
[2025-11-21 09:08:57] 2025-11-21 14:08:25,463 | INFO     | . log creation = 0 s
[2025-11-21 09:08:57] 2025-11-21 14:08:25,464 | INFO     | ..............................
[2025-11-21 09:08:57] 2025-11-21 14:08:25,564 | INFO     | 
[2025-11-21 09:08:57] 2025-11-21 14:08:25,564 | INFO     | job summary report
[2025-11-21 09:08:57] 2025-11-21 14:08:25,565 | INFO     | --------------------------------------------------
[2025-11-21 09:08:57] 2025-11-21 14:08:25,565 | INFO     | PanDA job id: 6893839068
[2025-11-21 09:08:57] 2025-11-21 14:08:25,565 | INFO     | task id: 47523449
[2025-11-21 09:08:57] 2025-11-21 14:08:25,565 | INFO     | errors: (none)
[2025-11-21 09:08:57] 2025-11-21 14:08:25,565 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 09:08:57] 2025-11-21 14:08:25,566 | INFO     | pilot state: finished 
[2025-11-21 09:08:57] 2025-11-21 14:08:25,566 | INFO     | transexitcode: 0
[2025-11-21 09:08:57] 2025-11-21 14:08:25,566 | INFO     | exeerrorcode: 0
[2025-11-21 09:08:57] 2025-11-21 14:08:25,566 | INFO     | exeerrordiag: 
[2025-11-21 09:08:57] 2025-11-21 14:08:25,566 | INFO     | exitcode: 0
[2025-11-21 09:08:57] 2025-11-21 14:08:25,566 | INFO     | exitmsg: OK
[2025-11-21 09:08:57] 2025-11-21 14:08:25,566 | INFO     | cpuconsumptiontime: 373472 s
[2025-11-21 09:08:57] 2025-11-21 14:08:25,567 | INFO     | nevents: 1000
[2025-11-21 09:08:57] 2025-11-21 14:08:25,567 | INFO     | neventsw: 0
[2025-11-21 09:08:57] 2025-11-21 14:08:25,567 | INFO     | pid: 32000
[2025-11-21 09:08:57] 2025-11-21 14:08:25,567 | INFO     | pgrp: 32000
[2025-11-21 09:08:57] 2025-11-21 14:08:25,567 | INFO     | corecount: 8
[2025-11-21 09:08:57] 2025-11-21 14:08:25,567 | INFO     | event service: False
[2025-11-21 09:08:57] 2025-11-21 14:08:25,568 | INFO     | sizes: {0: 2298636, 1: 2298835, 7: 2299097, 12: 2299125, 50801: 2347946, 50805: 2356940, 50807: 2357124, 50816: 2357370}
[2025-11-21 09:08:57] 2025-11-21 14:08:25,568 | INFO     | --------------------------------------------------
[2025-11-21 09:08:57] 2025-11-21 14:08:25,568 | INFO     | 
[2025-11-21 09:08:57] 2025-11-21 14:08:25,568 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-21 09:08:57] 2025-11-21 14:08:25,598 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 09:08:57] 2025-11-21 14:08:25,598 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 09:08:57] 2025-11-21 14:08:25,598 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 09:08:57] 2025-11-21 14:08:25,599 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 09:08:57] 2025-11-21 14:08:25,599 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 09:08:57] 2025-11-21 14:08:25,599 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 09:08:57] 2025-11-21 14:08:25,599 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 09:08:57] 2025-11-21 14:08:25,599 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 09:08:57] 2025-11-21 14:08:25,599 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 09:08:57] 2025-11-21 14:08:25,600 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 09:08:57] 2025-11-21 14:08:25,600 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 09:08:57] 2025-11-21 14:08:25,600 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 09:08:57] 2025-11-21 14:08:25,600 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 09:08:57] 2025-11-21 14:08:25,600 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 09:08:57] 2025-11-21 14:08:25,601 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 09:08:57] 2025-11-21 14:08:25,601 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 09:08:57] 2025-11-21 14:08:25,601 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 09:08:57] 2025-11-21 14:08:25,601 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 09:08:57] 2025-11-21 14:08:25,601 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 09:08:57] 2025-11-21 14:08:25,601 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 09:08:57] 2025-11-21 14:08:25,602 | INFO     | job 6893839068 has completed (purged errors)
[2025-11-21 09:08:57] 2025-11-21 14:08:25,602 | INFO     | overall cleanup function is called
[2025-11-21 09:08:57] 2025-11-21 14:08:26,618 | INFO     | --- collectZombieJob: --- 10, [32000]
[2025-11-21 09:08:57] 2025-11-21 14:08:26,618 | INFO     | zombie collector waiting for pid 32000
[2025-11-21 09:08:57] 2025-11-21 14:08:26,618 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 09:08:57] 2025-11-21 14:08:26,619 | INFO     | collected zombie processes
[2025-11-21 09:08:57] 2025-11-21 14:08:26,619 | INFO     | will attempt to kill all subprocesses of pid=32000
[2025-11-21 09:08:57] 2025-11-21 14:08:26,710 | INFO     | process IDs to be killed: [32000] (in reverse order)
[2025-11-21 09:08:57] 2025-11-21 14:08:26,769 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 09:08:57] 2025-11-21 14:08:26,770 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 09:08:57] 2025-11-21 14:08:26,774 | INFO     | did not find any defunct processes belonging to 32000
[2025-11-21 09:08:57] 2025-11-21 14:08:26,777 | INFO     | did not find any defunct processes belonging to 32000
[2025-11-21 09:08:57] 2025-11-21 14:08:26,780 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 09:08:57] 2025-11-21 14:08:26,780 | INFO     | ready for new job
[2025-11-21 09:08:57] 2025-11-21 14:08:26,780 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 09:08:57] 2025-11-21 14:08:26,784 | INFO     | ***************************************
[2025-11-21 09:08:57] 2025-11-21 14:08:26,784 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 09:08:57] 2025-11-21 14:08:26,784 | INFO     | ***************************************
[2025-11-21 09:08:57] 2025-11-21 14:08:26,784 | INFO     | 
[2025-11-21 09:08:57] 2025-11-21 14:08:26,785 | INFO     | architecture information:
[2025-11-21 09:08:57] 2025-11-21 14:08:26,785 | INFO     | executing command: cat /etc/os-release
[2025-11-21 09:08:57] 2025-11-21 14:08:26,805 | INFO     | cat /etc/os-release:
[2025-11-21 09:08:57] NAME="CentOS Linux"
[2025-11-21 09:08:57] VERSION="7 (Core)"
[2025-11-21 09:08:57] ID="centos"
[2025-11-21 09:08:57] ID_LIKE="rhel fedora"
[2025-11-21 09:08:57] VERSION_ID="7"
[2025-11-21 09:08:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 09:08:57] ANSI_COLOR="0;31"
[2025-11-21 09:08:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 09:08:57] HOME_URL="https://www.centos.org/"
[2025-11-21 09:08:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 09:08:57] 
[2025-11-21 09:08:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 09:08:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 09:08:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 09:08:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 09:08:57] 
[2025-11-21 09:08:57] 2025-11-21 14:08:26,806 | INFO     | ***************************************
[2025-11-21 09:08:57] 2025-11-21 14:08:27,309 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-21 09:08:57] 2025-11-21 14:08:27,329 | INFO     | sufficient remaining disk space (17460887552 B)
[2025-11-21 09:08:57] 2025-11-21 14:08:27,330 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 09:08:57] 2025-11-21 14:08:27,330 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 09:08:57] 2025-11-21 14:08:27,330 | INFO     | update_server=False
[2025-11-21 09:08:57] 2025-11-21 14:08:27,330 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 09:08:57] 2025-11-21 14:08:27,331 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 09:08:57] 2025-11-21 14:08:27,331 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 09:08:57] 2025-11-21 14:08:27,458 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 09:08:57] 2025-11-21 14:08:27,459 | INFO     | aborting loop
[2025-11-21 09:08:57] 2025-11-21 14:08:27,642 | INFO     | all payload control threads have been joined
[2025-11-21 09:08:57] 2025-11-21 14:08:27,775 | INFO     | all job control threads have been joined
[2025-11-21 09:08:57] 2025-11-21 14:08:27,830 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 09:08:57] 2025-11-21 14:08:28,228 | INFO     | all data control threads have been joined
[2025-11-21 09:08:57] 2025-11-21 14:08:28,336 | INFO     | [job] retrieve thread has finished
[2025-11-21 09:08:57] 2025-11-21 14:08:28,337 | INFO     | [job] queue monitor thread has finished
[2025-11-21 09:08:57] 2025-11-21 14:08:28,354 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 09:08:57] 2025-11-21 14:08:28,464 | INFO     | [job] job monitor thread has finished
[2025-11-21 09:08:57] 2025-11-21 14:08:28,493 | INFO     | [data] copytool_in thread has finished
[2025-11-21 09:08:57] 2025-11-21 14:08:28,642 | INFO     | [payload] control thread has finished
[2025-11-21 09:08:57] 2025-11-21 14:08:28,697 | INFO     | [payload] failed_post thread has finished
[2025-11-21 09:08:57] 2025-11-21 14:08:28,781 | INFO     | [job] control thread has finished
[2025-11-21 09:08:57] 2025-11-21 14:08:28,905 | INFO     | [job] validate thread has finished
[2025-11-21 09:08:57] 2025-11-21 14:08:29,126 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 09:08:57] 2025-11-21 14:08:29,234 | INFO     | [data] control thread has finished
[2025-11-21 09:08:57] 2025-11-21 14:08:29,547 | INFO     | [payload] validate_post thread has finished
[2025-11-21 09:08:57] 2025-11-21 14:08:29,674 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 09:08:57] 2025-11-21 14:08:29,835 | INFO     | [data] copytool_out thread has finished
[2025-11-21 09:08:57] 2025-11-21 14:08:31,338 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 09:08:57] 2025-11-21 14:08:34,430 | INFO     | [monitor] cgroup control has ended
[2025-11-21 09:08:57] 2025-11-21 14:08:37,939 | INFO     | job.realtimelogging is not enabled
[2025-11-21 09:08:57] 2025-11-21 14:08:38,944 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 09:08:57] 2025-11-21 14:08:40,487 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139899289331520)>', '<ExcThread(monitor, started 139898459764480)>']
[2025-11-21 09:08:57] 2025-11-21 14:08:45,490 | INFO     | all workflow threads have been joined
[2025-11-21 09:08:57] 2025-11-21 14:08:45,490 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 09:08:57] 2025-11-21 14:08:45,497 | INFO     | traces error code: 0
[2025-11-21 09:08:57] 2025-11-21 14:08:45,497 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 09:08:57] 2025-11-21 14:08:56,995 | INFO     | PID=25548 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-21 09:08:57] 2025-11-21 14:08:56,995 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 09:08:57] 2025-11-21 14:08:56,995 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 09:08:57] 2025-11-21 14:08:56,995 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 09:08:57] 2025-11-21 14:08:56,996 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 09:08:57] 2025-11-21 14:08:56,996 | INFO     | [monitor] control thread has ended
[2025-11-21 09:08:57] 2025-11-21 14:08:57,114 [wrapper] ==== pilot stdout END ====
[2025-11-21 09:08:57] 2025-11-21 14:08:57,118 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 09:08:57] 2025-11-21 14:08:57,123 [wrapper] pilotpid: 25548
[2025-11-21 09:08:57] 2025-11-21 14:08:57,128 [wrapper] Pilot exit status: 0
[2025-11-21 09:08:57] 2025-11-21 14:08:57,145 [wrapper] pandaids: 6893839068
[2025-11-21 09:08:57] 2025-11-21 14:08:57,190 [wrapper] cleanup supervisor_pilot 32228 25549
[2025-11-21 09:08:57] 2025-11-21 14:08:57,195 [wrapper] Test setup, not cleaning
[2025-11-21 09:08:57] 2025-11-21 14:08:57,201 [wrapper] apfmon messages muted
[2025-11-21 09:08:57] 2025-11-21 14:08:57,206 [wrapper] ==== wrapper stdout END ====
[2025-11-21 09:08:57] 2025-11-21 14:08:57,211 [wrapper] ==== wrapper stderr END ====
[2025-11-21 09:08:57]  *** Error codes and diagnostics ***
[2025-11-21 09:08:57]     "exeErrorCode": 0,
[2025-11-21 09:08:57]     "exeErrorDiag": "",
[2025-11-21 09:08:57]     "pilotErrorCode": 0,
[2025-11-21 09:08:57]     "pilotErrorDiag": "",
[2025-11-21 09:08:57]  *** Listing of results directory ***
[2025-11-21 09:08:57] total 1326804
[2025-11-21 09:08:57] -rw-r--r-- 1 boincer umatlas    576529 Nov 20 05:06 pilot3.tar.gz
[2025-11-21 09:08:57] -rwx------ 1 boincer umatlas     36292 Nov 20 05:18 runpilot2-wrapper.sh
[2025-11-21 09:08:57] -rw-r--r-- 1 boincer umatlas      5112 Nov 20 05:19 queuedata.json
[2025-11-21 09:08:57] -rw-r--r-- 1 boincer umatlas       100 Nov 20 19:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 09:08:57] -rwxr-xr-x 1 boincer umatlas      7986 Nov 20 19:00 run_atlas
[2025-11-21 09:08:57] -rw-r--r-- 1 boincer umatlas       105 Nov 20 19:00 job.xml
[2025-11-21 09:08:57] -rw-r--r-- 2 boincer umatlas 408607035 Nov 20 19:00 EVNT.47493127._000144.pool.root.1
[2025-11-21 09:08:57] -rw-r--r-- 2 boincer umatlas     15847 Nov 20 19:00 start_atlas.sh
[2025-11-21 09:08:57] drwxrwx--x 2 boincer umatlas      4096 Nov 20 19:00 shared
[2025-11-21 09:08:57] -rw-r--r-- 2 boincer umatlas    590103 Nov 20 19:00 input.tar.gz
[2025-11-21 09:08:57] -rw-r--r-- 1 boincer umatlas         0 Nov 20 19:00 boinc_lockfile
[2025-11-21 09:08:57] -rw-r--r-- 1 boincer umatlas      2786 Nov 20 19:00 pandaJob.out
[2025-11-21 09:08:57] -rw------- 1 boincer umatlas        57 Nov 20 19:00 setup.sh.local
[2025-11-21 09:08:57] -rw------- 1 boincer umatlas    989817 Nov 20 19:01 agis_schedconf.cvmfs.json
[2025-11-21 09:08:57] drwx------ 5 boincer umatlas      4096 Nov 20 19:01 pilot3
[2025-11-21 09:08:57] -rw-r--r-- 1 boincer umatlas       533 Nov 21 08:57 boinc_task_state.xml
[2025-11-21 09:08:57] -rw-r--r-- 1 boincer umatlas      5911 Nov 21 09:01 init_data.xml
[2025-11-21 09:08:57] -rw------- 1 boincer umatlas 927952347 Nov 21 09:07 HITS.47523449._001437.pool.root.1
[2025-11-21 09:08:57] -rw------- 1 boincer umatlas        95 Nov 21 09:07 pilot_heartbeat.json
[2025-11-21 09:08:57] -rw------- 1 boincer umatlas      1065 Nov 21 09:08 memory_monitor_summary.json
[2025-11-21 09:08:57] -rw------- 1 boincer umatlas   1526164 Nov 21 09:08 agis_ddmendpoints.agis.ALL.json
[2025-11-21 09:08:57] -rw------- 1 boincer umatlas   2061826 Nov 21 09:08 log.47523449._001437.job.log.tgz.1
[2025-11-21 09:08:57] -rw------- 1 boincer umatlas      8658 Nov 21 09:08 heartbeat.json
[2025-11-21 09:08:57] -rw-r--r-- 1 boincer umatlas      8192 Nov 21 09:08 boinc_mmap_file
[2025-11-21 09:08:57] -rw-r--r-- 1 boincer umatlas        29 Nov 21 09:08 wrapper_checkpoint.txt
[2025-11-21 09:08:57] -rw------- 1 boincer umatlas       745 Nov 21 09:08 pilotlog.txt
[2025-11-21 09:08:57] -rw------- 1 boincer umatlas   7021204 Nov 21 09:08 log.47523449._001437.job.log.1
[2025-11-21 09:08:57] -rw------- 1 boincer umatlas       353 Nov 21 09:08 output.list
[2025-11-21 09:08:57] -rw-r--r-- 1 boincer umatlas       620 Nov 21 09:08 runtime_log
[2025-11-21 09:08:57] -rw------- 1 boincer umatlas   9103360 Nov 21 09:08 result.tar.gz
[2025-11-21 09:08:57] -rw------- 1 boincer umatlas       669 Nov 21 09:08 xS0NDmZvGg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmWNGKDmuIndfm.diag
[2025-11-21 09:08:57] -rw-r--r-- 1 boincer umatlas      9338 Nov 21 09:08 runtime_log.err
[2025-11-21 09:08:57] -rw-r--r-- 1 boincer umatlas     21289 Nov 21 09:08 stderr.txt
[2025-11-21 09:08:57] HITS file was successfully produced:
[2025-11-21 09:08:57] -rw------- 1 boincer umatlas 927952347 Nov 21 09:07 shared/HITS.pool.root.1
[2025-11-21 09:08:57]  *** Contents of shared directory: ***
[2025-11-21 09:08:57] total 1314728
[2025-11-21 09:08:57] -rw-r--r-- 2 boincer umatlas 408607035 Nov 20 19:00 ATLAS.root_0
[2025-11-21 09:08:57] -rw-r--r-- 2 boincer umatlas     15847 Nov 20 19:00 start_atlas.sh
[2025-11-21 09:08:57] -rw-r--r-- 2 boincer umatlas    590103 Nov 20 19:00 input.tar.gz
[2025-11-21 09:08:57] -rw------- 1 boincer umatlas 927952347 Nov 21 09:07 HITS.pool.root.1
[2025-11-21 09:08:57] -rw------- 1 boincer umatlas   9103360 Nov 21 09:08 result.tar.gz
09:08:58 (21810): run_atlas exited; CPU time 362646.668855
09:08:58 (21810): called boinc_finish(0)

</stderr_txt>
]]>

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