Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:13:35 (2708022): wrapper (7.7.26015): starting
03:13:35 (2708022): wrapper: running run_atlas (--nthreads 4)
[2025-11-22 03:13:35] Arguments: --nthreads 4
[2025-11-22 03:13:35] Threads: 4
[2025-11-22 03:13:35] Checking for CVMFS
[2025-11-22 03:13:35] No cvmfs_config command found, will try listing directly
[2025-11-22 03:13:35] CVMFS is ok
[2025-11-22 03:13:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 03:13:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 03:13:35] Further information can be found at the LHC@home message board.
[2025-11-22 03:13:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 03:13:35] Checking for apptainer binary...
[2025-11-22 03:13:35] which: no apptainer in ((null))
[2025-11-22 03:13:35] apptainer is not installed, using version from CVMFS
[2025-11-22 03:13:35] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 03:13:35] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot40/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut26.grid.cesnet.cz
[2025-11-22 03:13:35] apptainer works
[2025-11-22 03:13:35] Set ATHENA_PROC_NUMBER=4
[2025-11-22 03:13:35] Set ATHENA_CORE_NUMBER=4
[2025-11-22 03:13:35] Starting ATLAS job with PandaID=6893848671
[2025-11-22 03:13:35] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot40/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 23:51:56]  *** The last 200 lines of the pilot log: ***
[2025-11-22 23:51:56] 2025-11-22 22:51:10,710 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 23:51:56] 2025-11-22 22:51:11,634 | INFO     | time since job start (74244s) is within the limit (172800.0s)
[2025-11-22 23:51:56] 2025-11-22 22:51:12,652 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-22 23:51:56] 2025-11-22 22:51:12,659 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2593.8938499999995
[2025-11-22 23:51:56] 2025-11-22 22:51:12,668 | INFO     | using path: /scratch/boinc/var/slot40/slots/0/PanDA_Pilot-6893848671/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 23:51:56] 2025-11-22 22:51:12,669 | INFO     | extracted standard info from prmon json
[2025-11-22 23:51:56] 2025-11-22 22:51:12,669 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 23:51:56] 2025-11-22 22:51:12,669 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 23:51:56] 2025-11-22 22:51:12,693 | INFO     | fitting pss+swap vs Time
[2025-11-22 23:51:56] 2025-11-22 22:51:12,695 | INFO     | sum of square deviations: 558920374859.9869
[2025-11-22 23:51:56] 2025-11-22 22:51:12,716 | INFO     | sum of deviations: 1272164292362.2075
[2025-11-22 23:51:56] 2025-11-22 22:51:12,716 | INFO     | mean x: 1763814741.0032868
[2025-11-22 23:51:56] 2025-11-22 22:51:12,716 | INFO     | mean y: 2316978.4478225145
[2025-11-22 23:51:56] 2025-11-22 22:51:12,716 | INFO     | intersect: -4012319511.425316
[2025-11-22 23:51:56] 2025-11-22 22:51:12,717 | INFO     | chi2: 4.43373411634217
[2025-11-22 23:51:56] 2025-11-22 22:51:12,718 | INFO     | sum of square deviations: 552059726514.987
[2025-11-22 23:51:56] 2025-11-22 22:51:12,741 | INFO     | sum of deviations: 1546666988660.9558
[2025-11-22 23:51:56] 2025-11-22 22:51:12,741 | INFO     | mean x: 1763814588.5033004
[2025-11-22 23:51:56] 2025-11-22 22:51:12,741 | INFO     | mean y: 2323076.636138614
[2025-11-22 23:51:56] 2025-11-22 22:51:12,741 | INFO     | intersect: -4939232460.077338
[2025-11-22 23:51:56] 2025-11-22 22:51:12,742 | INFO     | chi2: 2.033713735621552
[2025-11-22 23:51:56] 2025-11-22 22:51:12,742 | INFO     | current chi2=2.033713735621552 (change=54.13090450946198 %)
[2025-11-22 23:51:56] 2025-11-22 22:51:12,743 | INFO     | sum of square deviations: 545255451319.98615
[2025-11-22 23:51:56] 2025-11-22 22:51:12,764 | INFO     | sum of deviations: 1556035127089.9587
[2025-11-22 23:51:56] 2025-11-22 22:51:12,764 | INFO     | mean x: 1763814436.003314
[2025-11-22 23:51:56] 2025-11-22 22:51:12,764 | INFO     | mean y: 2323285.26014913
[2025-11-22 23:51:56] 2025-11-22 22:51:12,764 | INFO     | intersect: -5031202218.1444235
[2025-11-22 23:51:56] 2025-11-22 22:51:12,765 | INFO     | chi2: 1.9940016996875511
[2025-11-22 23:51:56] 2025-11-22 22:51:12,765 | INFO     | current chi2=1.9940016996875511 (change=1.9526856331067715 %)
[2025-11-22 23:51:56] 2025-11-22 22:51:12,765 | INFO     | right removable region: 1206
[2025-11-22 23:51:56] 2025-11-22 22:51:12,766 | INFO     | sum of square deviations: 552059724074.9869
[2025-11-22 23:51:56] 2025-11-22 22:51:12,787 | INFO     | sum of deviations: 1044429725294.0958
[2025-11-22 23:51:56] 2025-11-22 22:51:12,787 | INFO     | mean x: 1763814893.5033004
[2025-11-22 23:51:56] 2025-11-22 22:51:12,787 | INFO     | mean y: 2322033.726072607
[2025-11-22 23:51:56] 2025-11-22 22:51:12,788 | INFO     | intersect: -3334600810.5875278
[2025-11-22 23:51:56] 2025-11-22 22:51:12,788 | INFO     | chi2: 2.5942465356275903
[2025-11-22 23:51:56] 2025-11-22 22:51:12,788 | INFO     | current chi2=2.5942465356275903 (change=41.4884504222855 %)
[2025-11-22 23:51:56] 2025-11-22 22:51:12,789 | INFO     | sum of square deviations: 545255446439.98615
[2025-11-22 23:51:56] 2025-11-22 22:51:12,810 | INFO     | sum of deviations: 1014516596964.324
[2025-11-22 23:51:56] 2025-11-22 22:51:12,810 | INFO     | mean x: 1763815046.003314
[2025-11-22 23:51:56] 2025-11-22 22:51:12,810 | INFO     | mean y: 2322703.9188069594
[2025-11-22 23:51:56] 2025-11-22 22:51:12,810 | INFO     | intersect: -3279477871.992924
[2025-11-22 23:51:56] 2025-11-22 22:51:12,811 | INFO     | chi2: 2.5867802712847516
[2025-11-22 23:51:56] 2025-11-22 22:51:12,811 | INFO     | current chi2=2.5867802712847516 (change=0.28780087938066734 %)
[2025-11-22 23:51:56] 2025-11-22 22:51:12,811 | INFO     | left removable region: 20
[2025-11-22 23:51:56] 2025-11-22 22:51:12,812 | INFO     | sum of square deviations: 517287832068.48663
[2025-11-22 23:51:56] 2025-11-22 22:51:12,844 | INFO     | sum of deviations: 1266642990775.6833
[2025-11-22 23:51:56] 2025-11-22 22:51:12,844 | INFO     | mean x: 1763815015.5033727
[2025-11-22 23:51:56] 2025-11-22 22:51:12,844 | INFO     | mean y: 2329739.0792580103
[2025-11-22 23:51:56] 2025-11-22 22:51:12,844 | INFO     | intersect: -4316588642.353812
[2025-11-22 23:51:56] 2025-11-22 22:51:12,846 | INFO     | chi2: 0.1354990719114047
[2025-11-22 23:51:56] 2025-11-22 22:51:12,846 | INFO     | current memory leak: 2.45 B/s (using 1186 data points, chi2=0.14)
[2025-11-22 23:51:56] 2025-11-22 22:51:12,847 | INFO     | could have reported an average CPU frequency of 2607 MHz (44 samples)
[2025-11-22 23:51:56] 2025-11-22 22:51:12,848 | INFO     | ..............................
[2025-11-22 23:51:56] 2025-11-22 22:51:12,848 | INFO     | . Timing measurements:
[2025-11-22 23:51:56] 2025-11-22 22:51:12,848 | INFO     | . get job = 0 s
[2025-11-22 23:51:56] 2025-11-22 22:51:12,848 | INFO     | . initial setup = 1 s
[2025-11-22 23:51:56] 2025-11-22 22:51:12,848 | INFO     | . payload setup = 5 s
[2025-11-22 23:51:56] 2025-11-22 22:51:12,848 | INFO     | . stage-in = 0 s
[2025-11-22 23:51:56] 2025-11-22 22:51:12,848 | INFO     | . payload execution = 74211 s
[2025-11-22 23:51:56] 2025-11-22 22:51:12,848 | INFO     | . stage-out = 2 s
[2025-11-22 23:51:56] 2025-11-22 22:51:12,849 | INFO     | . log creation = 0 s
[2025-11-22 23:51:56] 2025-11-22 22:51:12,849 | INFO     | ..............................
[2025-11-22 23:51:56] 2025-11-22 22:51:12,909 | INFO     | 
[2025-11-22 23:51:56] 2025-11-22 22:51:12,909 | INFO     | job summary report
[2025-11-22 23:51:56] 2025-11-22 22:51:12,909 | INFO     | --------------------------------------------------
[2025-11-22 23:51:56] 2025-11-22 22:51:12,909 | INFO     | PanDA job id: 6893848671
[2025-11-22 23:51:56] 2025-11-22 22:51:12,909 | INFO     | task id: 47523449
[2025-11-22 23:51:56] 2025-11-22 22:51:12,910 | INFO     | errors: (none)
[2025-11-22 23:51:56] 2025-11-22 22:51:12,910 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 23:51:56] 2025-11-22 22:51:12,910 | INFO     | pilot state: finished 
[2025-11-22 23:51:56] 2025-11-22 22:51:12,910 | INFO     | transexitcode: 0
[2025-11-22 23:51:56] 2025-11-22 22:51:12,910 | INFO     | exeerrorcode: 0
[2025-11-22 23:51:56] 2025-11-22 22:51:12,910 | INFO     | exeerrordiag: 
[2025-11-22 23:51:56] 2025-11-22 22:51:12,910 | INFO     | exitcode: 0
[2025-11-22 23:51:56] 2025-11-22 22:51:12,910 | INFO     | exitmsg: OK
[2025-11-22 23:51:56] 2025-11-22 22:51:12,910 | INFO     | cpuconsumptiontime: 294316 s
[2025-11-22 23:51:56] 2025-11-22 22:51:12,911 | INFO     | nevents: 1000
[2025-11-22 23:51:56] 2025-11-22 22:51:12,911 | INFO     | neventsw: 0
[2025-11-22 23:51:56] 2025-11-22 22:51:12,911 | INFO     | pid: 2718817
[2025-11-22 23:51:56] 2025-11-22 22:51:12,911 | INFO     | pgrp: 2718817
[2025-11-22 23:51:56] 2025-11-22 22:51:12,911 | INFO     | corecount: 4
[2025-11-22 23:51:56] 2025-11-22 22:51:12,911 | INFO     | event service: False
[2025-11-22 23:51:56] 2025-11-22 22:51:12,911 | INFO     | sizes: {0: 2298818, 1: 2298818, 4: 2299108, 11: 2299136, 74220: 2358287, 74221: 2358286, 74223: 2367486, 74225: 2367542, 74230: 2367788}
[2025-11-22 23:51:56] 2025-11-22 22:51:12,911 | INFO     | --------------------------------------------------
[2025-11-22 23:51:56] 2025-11-22 22:51:12,911 | INFO     | 
[2025-11-22 23:51:56] 2025-11-22 22:51:12,912 | INFO     | executing command: ls -lF /scratch/boinc/var/slot40/slots/0
[2025-11-22 23:51:56] 2025-11-22 22:51:12,931 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 23:51:56] 2025-11-22 22:51:12,932 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 23:51:56] 2025-11-22 22:51:12,932 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 23:51:56] 2025-11-22 22:51:12,932 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 23:51:56] 2025-11-22 22:51:12,932 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 23:51:56] 2025-11-22 22:51:12,932 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 23:51:56] 2025-11-22 22:51:12,933 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 23:51:56] 2025-11-22 22:51:12,933 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 23:51:56] 2025-11-22 22:51:12,933 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 23:51:56] 2025-11-22 22:51:12,934 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 23:51:56] 2025-11-22 22:51:12,934 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 23:51:56] 2025-11-22 22:51:12,934 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 23:51:56] 2025-11-22 22:51:12,934 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 23:51:56] 2025-11-22 22:51:12,934 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 23:51:56] 2025-11-22 22:51:12,934 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 23:51:56] 2025-11-22 22:51:12,934 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 23:51:56] 2025-11-22 22:51:12,935 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 23:51:56] 2025-11-22 22:51:12,935 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 23:51:56] 2025-11-22 22:51:12,935 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 23:51:56] 2025-11-22 22:51:12,935 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 23:51:56] 2025-11-22 22:51:12,935 | INFO     | job 6893848671 has completed (purged errors)
[2025-11-22 23:51:56] 2025-11-22 22:51:12,935 | INFO     | overall cleanup function is called
[2025-11-22 23:51:56] 2025-11-22 22:51:13,949 | INFO     | --- collectZombieJob: --- 10, [2718817]
[2025-11-22 23:51:56] 2025-11-22 22:51:13,949 | INFO     | zombie collector waiting for pid 2718817
[2025-11-22 23:51:56] 2025-11-22 22:51:13,949 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 23:51:56] 2025-11-22 22:51:13,949 | INFO     | collected zombie processes
[2025-11-22 23:51:56] 2025-11-22 22:51:13,949 | INFO     | will attempt to kill all subprocesses of pid=2718817
[2025-11-22 23:51:56] 2025-11-22 22:51:14,321 | INFO     | process IDs to be killed: [2718817] (in reverse order)
[2025-11-22 23:51:56] 2025-11-22 22:51:14,406 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 23:51:56] 2025-11-22 22:51:14,406 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 23:51:56] 2025-11-22 22:51:14,416 | INFO     | did not find any defunct processes belonging to 2718817
[2025-11-22 23:51:56] 2025-11-22 22:51:14,426 | INFO     | did not find any defunct processes belonging to 2718817
[2025-11-22 23:51:56] 2025-11-22 22:51:14,427 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 23:51:56] 2025-11-22 22:51:14,427 | INFO     | ready for new job
[2025-11-22 23:51:56] 2025-11-22 22:51:14,428 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 23:51:56] 2025-11-22 22:51:14,433 | INFO     | ***************************************
[2025-11-22 23:51:56] 2025-11-22 22:51:14,434 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 23:51:56] 2025-11-22 22:51:14,434 | INFO     | ***************************************
[2025-11-22 23:51:56] 2025-11-22 22:51:14,434 | INFO     | 
[2025-11-22 23:51:56] 2025-11-22 22:51:14,436 | INFO     | architecture information:
[2025-11-22 23:51:56] 2025-11-22 22:51:14,437 | INFO     | executing command: cat /etc/os-release
[2025-11-22 23:51:56] 2025-11-22 22:51:14,451 | INFO     | cat /etc/os-release:
[2025-11-22 23:51:56] NAME="CentOS Linux"
[2025-11-22 23:51:56] VERSION="7 (Core)"
[2025-11-22 23:51:56] ID="centos"
[2025-11-22 23:51:56] ID_LIKE="rhel fedora"
[2025-11-22 23:51:56] VERSION_ID="7"
[2025-11-22 23:51:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 23:51:56] ANSI_COLOR="0;31"
[2025-11-22 23:51:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 23:51:56] HOME_URL="https://www.centos.org/"
[2025-11-22 23:51:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 23:51:56] 
[2025-11-22 23:51:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 23:51:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 23:51:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 23:51:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 23:51:56] 
[2025-11-22 23:51:56] 2025-11-22 22:51:14,452 | INFO     | ***************************************
[2025-11-22 23:51:56] 2025-11-22 22:51:14,954 | INFO     | executing command: df -mP /scratch/boinc/var/slot40/slots/0
[2025-11-22 23:51:56] 2025-11-22 22:51:14,972 | INFO     | sufficient remaining disk space (1663400148992 B)
[2025-11-22 23:51:56] 2025-11-22 22:51:14,973 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 23:51:56] 2025-11-22 22:51:14,973 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 23:51:56] 2025-11-22 22:51:14,973 | INFO     | update_server=False
[2025-11-22 23:51:56] 2025-11-22 22:51:14,973 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 23:51:56] 2025-11-22 22:51:14,974 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 23:51:56] 2025-11-22 22:51:14,974 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 23:51:56] 2025-11-22 22:51:14,974 | INFO     | aborting loop
[2025-11-22 23:51:56] 2025-11-22 22:51:15,929 | INFO     | all payload control threads have been joined
[2025-11-22 23:51:56] 2025-11-22 22:51:15,951 | INFO     | all data control threads have been joined
[2025-11-22 23:51:56] 2025-11-22 22:51:15,975 | INFO     | [job] job monitor thread has finished
[2025-11-22 23:51:56] 2025-11-22 22:51:15,979 | INFO     | [job] retrieve thread has finished
[2025-11-22 23:51:56] 2025-11-22 22:51:16,148 | INFO     | [payload] validate_post thread has finished
[2025-11-22 23:51:56] 2025-11-22 22:51:16,208 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 23:51:56] 2025-11-22 22:51:16,365 | INFO     | [data] copytool_in thread has finished
[2025-11-22 23:51:56] 2025-11-22 22:51:16,460 | INFO     | [job] validate thread has finished
[2025-11-22 23:51:56] 2025-11-22 22:51:16,531 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 23:51:56] 2025-11-22 22:51:16,538 | INFO     | all job control threads have been joined
[2025-11-22 23:51:56] 2025-11-22 22:51:16,558 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 23:51:56] 2025-11-22 22:51:16,668 | INFO     | [payload] failed_post thread has finished
[2025-11-22 23:51:56] 2025-11-22 22:51:16,937 | INFO     | [payload] control thread has finished
[2025-11-22 23:51:56] 2025-11-22 22:51:16,956 | INFO     | [data] control thread has finished
[2025-11-22 23:51:56] 2025-11-22 22:51:16,979 | INFO     | [data] copytool_out thread has finished
[2025-11-22 23:51:56] 2025-11-22 22:51:17,543 | INFO     | [job] control thread has finished
[2025-11-22 23:51:56] 2025-11-22 22:51:17,920 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 23:51:56] 2025-11-22 22:51:18,142 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 23:51:56] 2025-11-22 22:51:18,921 | INFO     | [job] queue monitor thread has finished
[2025-11-22 23:51:56] 2025-11-22 22:51:22,148 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 23:51:56] 2025-11-22 22:51:25,132 | INFO     | job.realtimelogging is not enabled
[2025-11-22 23:51:56] 2025-11-22 22:51:26,133 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 23:51:56] 2025-11-22 22:51:45,137 | INFO     | PID=2712054 has CPU usage=8.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 23:51:56] 2025-11-22 22:51:45,138 | INFO     | .. there are 2 such processes running
[2025-11-22 23:51:56] 2025-11-22 22:51:45,138 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 23:51:56] 2025-11-22 22:51:45,138 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 23:51:56] 2025-11-22 22:51:45,138 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 23:51:56] 2025-11-22 22:51:46,107 | INFO     | [monitor] cgroup control has ended
[2025-11-22 23:51:56] 2025-11-22 22:51:47,368 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22748059830080)>', '<ExcThread(monitor, started 22747482670848)>']
[2025-11-22 23:51:56] 2025-11-22 22:51:48,153 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 23:51:56] 2025-11-22 22:51:48,153 | INFO     | [monitor] control thread has ended
[2025-11-22 23:51:56] 2025-11-22 22:51:52,393 | INFO     | all workflow threads have been joined
[2025-11-22 23:51:56] 2025-11-22 22:51:52,393 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 23:51:56] 2025-11-22 22:51:52,393 | INFO     | traces error code: 0
[2025-11-22 23:51:56] 2025-11-22 22:51:52,394 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 23:51:56] 2025-11-22 22:51:52,517 [wrapper] ==== pilot stdout END ====
[2025-11-22 23:51:56] 2025-11-22 22:51:52,520 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 23:51:56] 2025-11-22 22:51:52,522 [wrapper] pilotpid: 2712054
[2025-11-22 23:51:56] 2025-11-22 22:51:52,525 [wrapper] Pilot exit status: 0
[2025-11-22 23:51:56] 2025-11-22 22:51:52,535 [wrapper] pandaids: 6893848671
[2025-11-22 23:51:56] 2025-11-22 22:51:52,589 [wrapper] cleanup supervisor_pilot 3476446 2712055
[2025-11-22 23:51:56] 2025-11-22 22:51:52,592 [wrapper] Test setup, not cleaning
[2025-11-22 23:51:56] 2025-11-22 22:51:52,594 [wrapper] apfmon messages muted
[2025-11-22 23:51:56] 2025-11-22 22:51:52,597 [wrapper] ==== wrapper stdout END ====
[2025-11-22 23:51:56] 2025-11-22 22:51:52,599 [wrapper] ==== wrapper stderr END ====
[2025-11-22 23:51:56]  *** Error codes and diagnostics ***
[2025-11-22 23:51:56]     "exeErrorCode": 0,
[2025-11-22 23:51:56]     "exeErrorDiag": "",
[2025-11-22 23:51:56]     "pilotErrorCode": 0,
[2025-11-22 23:51:56]     "pilotErrorDiag": "",
[2025-11-22 23:51:56]  *** Listing of results directory ***
[2025-11-22 23:51:56] total 1318816
[2025-11-22 23:51:56] -rw-r--r-- 1 boinc boinc    576529 Nov 20 11:06 pilot3.tar.gz
[2025-11-22 23:51:56] -rwx------ 1 boinc boinc     36292 Nov 20 11:54 runpilot2-wrapper.sh
[2025-11-22 23:51:56] -rw-r--r-- 1 boinc boinc      5112 Nov 20 11:54 queuedata.json
[2025-11-22 23:51:56] -rw-r--r-- 1 boinc boinc       100 Nov 22 03:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 23:51:56] -rwxr-xr-x 1 boinc boinc      7986 Nov 22 03:13 run_atlas
[2025-11-22 23:51:56] -rw-r--r-- 1 boinc boinc       105 Nov 22 03:13 job.xml
[2025-11-22 23:51:56] -rw-r--r-- 2 boinc boinc 410030916 Nov 22 03:13 EVNT.47493127._000289.pool.root.1
[2025-11-22 23:51:56] -rw-r--r-- 1 boinc boinc      6420 Nov 22 03:13 init_data.xml
[2025-11-22 23:51:56] -rw-r--r-- 2 boinc boinc     15847 Nov 22 03:13 start_atlas.sh
[2025-11-22 23:51:56] drwxrwx--x 2 boinc boinc      4096 Nov 22 03:13 shared
[2025-11-22 23:51:56] -rw-r--r-- 2 boinc boinc    590099 Nov 22 03:13 input.tar.gz
[2025-11-22 23:51:56] -rw-r--r-- 1 boinc boinc         0 Nov 22 03:13 boinc_lockfile
[2025-11-22 23:51:56] -rw-r--r-- 1 boinc boinc      2786 Nov 22 03:13 pandaJob.out
[2025-11-22 23:51:56] -rw------- 1 boinc boinc    989798 Nov 22 03:13 agis_schedconf.cvmfs.json
[2025-11-22 23:51:56] drwx------ 5 boinc boinc      4096 Nov 22 03:13 pilot3
[2025-11-22 23:51:56] -rw-r--r-- 1 boinc boinc       532 Nov 22 23:43 boinc_task_state.xml
[2025-11-22 23:51:56] -rw------- 1 boinc boinc 911854719 Nov 22 23:50 HITS.47523449._002883.pool.root.1
[2025-11-22 23:51:56] -rw------- 1 boinc boinc      1049 Nov 22 23:51 memory_monitor_summary.json
[2025-11-22 23:51:56] -rw------- 1 boinc boinc        95 Nov 22 23:51 pilot_heartbeat.json
[2025-11-22 23:51:56] -rw------- 1 boinc boinc   1526164 Nov 22 23:51 agis_ddmendpoints.agis.ALL.json
[2025-11-22 23:51:56] -rw------- 1 boinc boinc   1898396 Nov 22 23:51 log.47523449._002883.job.log.tgz.1
[2025-11-22 23:51:56] -rw------- 1 boinc boinc      8627 Nov 22 23:51 heartbeat.json
[2025-11-22 23:51:56] -rw------- 1 boinc boinc      4906 Nov 22 23:51 pilotlog.txt
[2025-11-22 23:51:56] -rw------- 1 boinc boinc  10429985 Nov 22 23:51 log.47523449._002883.job.log.1
[2025-11-22 23:51:56] -rw------- 1 boinc boinc       353 Nov 22 23:51 output.list
[2025-11-22 23:51:56] -rw-r--r-- 1 boinc boinc       620 Nov 22 23:51 runtime_log
[2025-11-22 23:51:56] -rw------- 1 boinc boinc  12349440 Nov 22 23:51 result.tar.gz
[2025-11-22 23:51:56] -rw-r--r-- 1 boinc boinc      9206 Nov 22 23:51 runtime_log.err
[2025-11-22 23:51:56] -rw------- 1 boinc boinc       670 Nov 22 23:51 GN6NDmfUHg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmeYHKDmdcZg2n.diag
[2025-11-22 23:51:56] -rw-r--r-- 1 boinc boinc        28 Nov 22 23:51 wrapper_checkpoint.txt
[2025-11-22 23:51:56] -rw-r--r-- 1 boinc boinc      8192 Nov 22 23:51 boinc_mmap_file
[2025-11-22 23:51:56] -rw-r--r-- 1 boinc boinc     21118 Nov 22 23:51 stderr.txt
[2025-11-22 23:51:56] HITS file was successfully produced:
[2025-11-22 23:51:56] -rw------- 1 boinc boinc 911854719 Nov 22 23:50 shared/HITS.pool.root.1
[2025-11-22 23:51:56]  *** Contents of shared directory: ***
[2025-11-22 23:51:56] total 1303572
[2025-11-22 23:51:56] -rw-r--r-- 2 boinc boinc 410030916 Nov 22 03:13 ATLAS.root_0
[2025-11-22 23:51:56] -rw-r--r-- 2 boinc boinc     15847 Nov 22 03:13 start_atlas.sh
[2025-11-22 23:51:56] -rw-r--r-- 2 boinc boinc    590099 Nov 22 03:13 input.tar.gz
[2025-11-22 23:51:56] -rw------- 1 boinc boinc 911854719 Nov 22 23:50 HITS.pool.root.1
[2025-11-22 23:51:56] -rw------- 1 boinc boinc  12349440 Nov 22 23:51 result.tar.gz
23:51:57 (2708022): run_atlas exited; CPU time 296981.158755
23:51:57 (2708022): called boinc_finish(0)

</stderr_txt>
]]>

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