Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:02:50 (2271803): wrapper (7.7.26015): starting
00:02:50 (2271803): wrapper: running run_atlas (--nthreads 9)
[2025-11-21 00:02:50] Arguments: --nthreads 9
[2025-11-21 00:02:50] Threads: 9
[2025-11-21 00:02:50] Checking for CVMFS
[2025-11-21 00:02:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-21 00:02:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-21 00:02:50] Running cvmfs_config stat atlas.cern.ch
[2025-11-21 00:02:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-21 00:02:51] 2.13.2.0 9698 26198 260376 153108 2 73 38530304 40960000 10739 16776704 0 21955331 99.579 19842256 27015 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-21 00:02:51] CVMFS is ok
[2025-11-21 00:02:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 00:02:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 00:02:51] Further information can be found at the LHC@home message board.
[2025-11-21 00:02:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 00:02:51] Checking for apptainer binary...
[2025-11-21 00:02:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-21 00:02:51] Running /usr/bin/apptainer --version
[2025-11-21 00:02:51] apptainer version 1.4.4-1.el9
[2025-11-21 00:02:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 00:02:51] c-210-8.aglt2.org
[2025-11-21 00:02:51] apptainer works
[2025-11-21 00:02:51] Set ATHENA_PROC_NUMBER=9
[2025-11-21 00:02:51] Set ATHENA_CORE_NUMBER=9
[2025-11-21 00:02:51] Starting ATLAS job with PandaID=6893862014
[2025-11-21 00:02:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 12:10:40]  *** The last 200 lines of the pilot log: ***
[2025-11-21 12:10:40] 2025-11-21 17:10:02,327 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 12:10:40] 2025-11-21 17:10:02,343 | INFO     | fitting pss+swap vs Time
[2025-11-21 12:10:40] 2025-11-21 17:10:02,344 | INFO     | sum of square deviations: 112854762706.47752
[2025-11-21 12:10:40] 2025-11-21 17:10:02,357 | INFO     | sum of deviations: 1540211510981.5254
[2025-11-21 12:10:40] 2025-11-21 17:10:02,359 | INFO     | mean x: 1763723166.8389356
[2025-11-21 12:10:40] 2025-11-21 17:10:02,360 | INFO     | mean y: 3028210.743697479
[2025-11-21 12:10:40] 2025-11-21 17:10:02,360 | INFO     | intersect: -24067792183.56651
[2025-11-21 12:10:40] 2025-11-21 17:10:02,361 | INFO     | chi2: 7.158666279213735
[2025-11-21 12:10:40] 2025-11-21 17:10:02,362 | INFO     | sum of square deviations: 110500433384.95059
[2025-11-21 12:10:40] 2025-11-21 17:10:02,373 | INFO     | sum of deviations: 1804430700729.7625
[2025-11-21 12:10:40] 2025-11-21 17:10:02,374 | INFO     | mean x: 1763723014.348378
[2025-11-21 12:10:40] 2025-11-21 17:10:02,374 | INFO     | mean y: 3045327.2722143866
[2025-11-21 12:10:40] 2025-11-21 17:10:02,374 | INFO     | intersect: -28797891077.98979
[2025-11-21 12:10:40] 2025-11-21 17:10:02,379 | INFO     | chi2: 3.6402849620286677
[2025-11-21 12:10:40] 2025-11-21 17:10:02,380 | INFO     | current chi2=3.6402849620286677 (change=49.14855896273887 %)
[2025-11-21 12:10:40] 2025-11-21 17:10:02,381 | INFO     | sum of square deviations: 108179038422.51035
[2025-11-21 12:10:40] 2025-11-21 17:10:02,404 | INFO     | sum of deviations: 1935206743084.7898
[2025-11-21 12:10:40] 2025-11-21 17:10:02,405 | INFO     | mean x: 1763722861.856534
[2025-11-21 12:10:40] 2025-11-21 17:10:02,405 | INFO     | mean y: 3053900.512784091
[2025-11-21 12:10:40] 2025-11-21 17:10:02,405 | INFO     | intersect: -31548052718.37672
[2025-11-21 12:10:40] 2025-11-21 17:10:02,406 | INFO     | chi2: 2.362289069568435
[2025-11-21 12:10:40] 2025-11-21 17:10:02,406 | INFO     | current chi2=2.362289069568435 (change=35.10702886699363 %)
[2025-11-21 12:10:40] 2025-11-21 17:10:02,411 | INFO     | sum of square deviations: 105890216246.86995
[2025-11-21 12:10:40] 2025-11-21 17:10:02,435 | INFO     | sum of deviations: 1905176899375.2788
[2025-11-21 12:10:40] 2025-11-21 17:10:02,435 | INFO     | mean x: 1763722709.3590844
[2025-11-21 12:10:40] 2025-11-21 17:10:02,435 | INFO     | mean y: 3051899.7439198857
[2025-11-21 12:10:40] 2025-11-21 17:10:02,435 | INFO     | intersect: -31729849230.050797
[2025-11-21 12:10:40] 2025-11-21 17:10:02,436 | INFO     | chi2: 2.358710700296269
[2025-11-21 12:10:40] 2025-11-21 17:10:02,436 | INFO     | current chi2=2.358710700296269 (change=0.1514788904653396 %)
[2025-11-21 12:10:40] 2025-11-21 17:10:02,436 | INFO     | right removable region: 698
[2025-11-21 12:10:40] 2025-11-21 17:10:02,437 | INFO     | sum of square deviations: 110499893536.64606
[2025-11-21 12:10:40] 2025-11-21 17:10:02,461 | INFO     | sum of deviations: 1331616109409.1675
[2025-11-21 12:10:40] 2025-11-21 17:10:02,461 | INFO     | mean x: 1763723319.3469675
[2025-11-21 12:10:40] 2025-11-21 17:10:02,461 | INFO     | mean y: 3041697.844851904
[2025-11-21 12:10:40] 2025-11-21 17:10:02,461 | INFO     | intersect: -21251299002.530064
[2025-11-21 12:10:40] 2025-11-21 17:10:02,462 | INFO     | chi2: 5.007601680595788
[2025-11-21 12:10:40] 2025-11-21 17:10:02,462 | INFO     | current chi2=5.007601680595788 (change=30.048398887707435 %)
[2025-11-21 12:10:40] 2025-11-21 17:10:02,463 | INFO     | sum of square deviations: 108178434948.18155
[2025-11-21 12:10:40] 2025-11-21 17:10:02,479 | INFO     | sum of deviations: 1271551234653.1365
[2025-11-21 12:10:40] 2025-11-21 17:10:02,479 | INFO     | mean x: 1763723471.840909
[2025-11-21 12:10:40] 2025-11-21 17:10:02,479 | INFO     | mean y: 3045642.2244318184
[2025-11-21 12:10:40] 2025-11-21 17:10:02,479 | INFO     | intersect: -20728117267.28042
[2025-11-21 12:10:40] 2025-11-21 17:10:02,480 | INFO     | chi2: 4.963344660684891
[2025-11-21 12:10:40] 2025-11-21 17:10:02,480 | INFO     | current chi2=4.963344660684891 (change=0.8837967301271328 %)
[2025-11-21 12:10:40] 2025-11-21 17:10:02,480 | INFO     | left removable region: 20
[2025-11-21 12:10:40] 2025-11-21 17:10:02,481 | INFO     | sum of square deviations: 96629084566.24341
[2025-11-21 12:10:40] 2025-11-21 17:10:02,492 | INFO     | sum of deviations: 1520802792741.2532
[2025-11-21 12:10:40] 2025-11-21 17:10:02,492 | INFO     | mean x: 1763723288.8628318
[2025-11-21 12:10:40] 2025-11-21 17:10:02,492 | INFO     | mean y: 3077447.0457227137
[2025-11-21 12:10:40] 2025-11-21 17:10:02,493 | INFO     | intersect: -27755390051.283596
[2025-11-21 12:10:40] 2025-11-21 17:10:02,493 | INFO     | chi2: 0.0754120818679744
[2025-11-21 12:10:40] 2025-11-21 17:10:02,494 | INFO     | current memory leak: 15.74 B/s (using 678 data points, chi2=0.08)
[2025-11-21 12:10:40] 2025-11-21 17:10:02,495 | INFO     | could have reported an average CPU frequency of 2655 MHz (27 samples)
[2025-11-21 12:10:40] 2025-11-21 17:10:02,495 | INFO     | ..............................
[2025-11-21 12:10:40] 2025-11-21 17:10:02,495 | INFO     | . Timing measurements:
[2025-11-21 12:10:40] 2025-11-21 17:10:02,495 | INFO     | . get job = 0 s
[2025-11-21 12:10:40] 2025-11-21 17:10:02,495 | INFO     | . initial setup = 2 s
[2025-11-21 12:10:40] 2025-11-21 17:10:02,495 | INFO     | . payload setup = 7 s
[2025-11-21 12:10:40] 2025-11-21 17:10:02,495 | INFO     | . stage-in = 0 s
[2025-11-21 12:10:40] 2025-11-21 17:10:02,495 | INFO     | . payload execution = 43547 s
[2025-11-21 12:10:40] 2025-11-21 17:10:02,496 | INFO     | . stage-out = 5 s
[2025-11-21 12:10:40] 2025-11-21 17:10:02,496 | INFO     | . log creation = 1 s
[2025-11-21 12:10:40] 2025-11-21 17:10:02,496 | INFO     | ..............................
[2025-11-21 12:10:40] 2025-11-21 17:10:03,529 | INFO     | time since job start (43615s) is within the limit (172800.0s)
[2025-11-21 12:10:40] 2025-11-21 17:10:03,641 | INFO     | 
[2025-11-21 12:10:40] 2025-11-21 17:10:03,641 | INFO     | job summary report
[2025-11-21 12:10:40] 2025-11-21 17:10:03,641 | INFO     | --------------------------------------------------
[2025-11-21 12:10:40] 2025-11-21 17:10:03,641 | INFO     | PanDA job id: 6893862014
[2025-11-21 12:10:40] 2025-11-21 17:10:03,641 | INFO     | task id: 47523449
[2025-11-21 12:10:40] 2025-11-21 17:10:03,641 | INFO     | errors: (none)
[2025-11-21 12:10:40] 2025-11-21 17:10:03,642 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 12:10:40] 2025-11-21 17:10:03,642 | INFO     | pilot state: finished 
[2025-11-21 12:10:40] 2025-11-21 17:10:03,642 | INFO     | transexitcode: 0
[2025-11-21 12:10:40] 2025-11-21 17:10:03,642 | INFO     | exeerrorcode: 0
[2025-11-21 12:10:40] 2025-11-21 17:10:03,643 | INFO     | exeerrordiag: 
[2025-11-21 12:10:40] 2025-11-21 17:10:03,643 | INFO     | exitcode: 0
[2025-11-21 12:10:40] 2025-11-21 17:10:03,643 | INFO     | exitmsg: OK
[2025-11-21 12:10:40] 2025-11-21 17:10:03,643 | INFO     | cpuconsumptiontime: 320028 s
[2025-11-21 12:10:40] 2025-11-21 17:10:03,643 | INFO     | nevents: 1000
[2025-11-21 12:10:40] 2025-11-21 17:10:03,643 | INFO     | neventsw: 0
[2025-11-21 12:10:40] 2025-11-21 17:10:03,643 | INFO     | pid: 2292587
[2025-11-21 12:10:40] 2025-11-21 17:10:03,644 | INFO     | pgrp: 2292587
[2025-11-21 12:10:40] 2025-11-21 17:10:03,644 | INFO     | corecount: 9
[2025-11-21 12:10:40] 2025-11-21 17:10:03,644 | INFO     | event service: False
[2025-11-21 12:10:40] 2025-11-21 17:10:03,644 | INFO     | sizes: {0: 2298636, 1: 2298835, 7: 2299097, 12: 2299125, 43561: 2344710, 43566: 2353888, 43598: 2354078}
[2025-11-21 12:10:40] 2025-11-21 17:10:03,644 | INFO     | --------------------------------------------------
[2025-11-21 12:10:40] 2025-11-21 17:10:03,644 | INFO     | 
[2025-11-21 12:10:40] 2025-11-21 17:10:03,675 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-21 12:10:40] 2025-11-21 17:10:03,731 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 12:10:40] 2025-11-21 17:10:03,731 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 12:10:40] 2025-11-21 17:10:03,731 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 12:10:40] 2025-11-21 17:10:03,731 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 12:10:40] 2025-11-21 17:10:03,732 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 12:10:40] 2025-11-21 17:10:03,732 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 12:10:40] 2025-11-21 17:10:03,732 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 12:10:40] 2025-11-21 17:10:03,736 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 12:10:40] 2025-11-21 17:10:03,736 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 12:10:40] 2025-11-21 17:10:03,736 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 12:10:40] 2025-11-21 17:10:03,736 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 12:10:40] 2025-11-21 17:10:03,736 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 12:10:40] 2025-11-21 17:10:03,736 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 12:10:40] 2025-11-21 17:10:03,736 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 12:10:40] 2025-11-21 17:10:03,736 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 12:10:40] 2025-11-21 17:10:03,737 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 12:10:40] 2025-11-21 17:10:03,737 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 12:10:40] 2025-11-21 17:10:03,737 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 12:10:40] 2025-11-21 17:10:03,737 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 12:10:40] 2025-11-21 17:10:03,737 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 12:10:40] 2025-11-21 17:10:03,737 | INFO     | job 6893862014 has completed (purged errors)
[2025-11-21 12:10:40] 2025-11-21 17:10:03,737 | INFO     | overall cleanup function is called
[2025-11-21 12:10:40] 2025-11-21 17:10:04,765 | INFO     | --- collectZombieJob: --- 10, [2292587]
[2025-11-21 12:10:40] 2025-11-21 17:10:04,765 | INFO     | zombie collector waiting for pid 2292587
[2025-11-21 12:10:40] 2025-11-21 17:10:04,765 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 12:10:40] 2025-11-21 17:10:04,765 | INFO     | collected zombie processes
[2025-11-21 12:10:40] 2025-11-21 17:10:04,765 | INFO     | will attempt to kill all subprocesses of pid=2292587
[2025-11-21 12:10:40] 2025-11-21 17:10:05,975 | INFO     | process IDs to be killed: [2292587] (in reverse order)
[2025-11-21 12:10:40] 2025-11-21 17:10:06,174 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 12:10:40] 2025-11-21 17:10:06,179 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 12:10:40] 2025-11-21 17:10:06,203 | INFO     | did not find any defunct processes belonging to 2292587
[2025-11-21 12:10:40] 2025-11-21 17:10:06,223 | INFO     | did not find any defunct processes belonging to 2292587
[2025-11-21 12:10:40] 2025-11-21 17:10:06,229 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 12:10:40] 2025-11-21 17:10:06,229 | INFO     | ready for new job
[2025-11-21 12:10:40] 2025-11-21 17:10:06,230 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 12:10:40] 2025-11-21 17:10:06,234 | INFO     | ***************************************
[2025-11-21 12:10:40] 2025-11-21 17:10:06,234 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 12:10:40] 2025-11-21 17:10:06,295 | INFO     | ***************************************
[2025-11-21 12:10:40] 2025-11-21 17:10:06,295 | INFO     | 
[2025-11-21 12:10:40] 2025-11-21 17:10:06,297 | INFO     | architecture information:
[2025-11-21 12:10:40] 2025-11-21 17:10:06,305 | INFO     | executing command: cat /etc/os-release
[2025-11-21 12:10:40] 2025-11-21 17:10:06,379 | INFO     | cat /etc/os-release:
[2025-11-21 12:10:40] NAME="CentOS Linux"
[2025-11-21 12:10:40] VERSION="7 (Core)"
[2025-11-21 12:10:40] ID="centos"
[2025-11-21 12:10:40] ID_LIKE="rhel fedora"
[2025-11-21 12:10:40] VERSION_ID="7"
[2025-11-21 12:10:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 12:10:40] ANSI_COLOR="0;31"
[2025-11-21 12:10:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 12:10:40] HOME_URL="https://www.centos.org/"
[2025-11-21 12:10:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 12:10:40] 
[2025-11-21 12:10:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 12:10:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 12:10:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 12:10:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 12:10:40] 
[2025-11-21 12:10:40] 2025-11-21 17:10:06,379 | INFO     | ***************************************
[2025-11-21 12:10:40] 2025-11-21 17:10:06,883 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-21 12:10:40] 2025-11-21 17:10:06,931 | INFO     | sufficient remaining disk space (57153683456 B)
[2025-11-21 12:10:40] 2025-11-21 17:10:06,931 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 12:10:40] 2025-11-21 17:10:06,932 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 12:10:40] 2025-11-21 17:10:06,932 | INFO     | update_server=False
[2025-11-21 12:10:40] 2025-11-21 17:10:06,932 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 12:10:40] 2025-11-21 17:10:06,932 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 12:10:40] 2025-11-21 17:10:06,932 | INFO     | aborting loop
[2025-11-21 12:10:40] 2025-11-21 17:10:06,939 | INFO     | all job control threads have been joined
[2025-11-21 12:10:40] 2025-11-21 17:10:07,040 | INFO     | all data control threads have been joined
[2025-11-21 12:10:40] 2025-11-21 17:10:07,163 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 12:10:40] 2025-11-21 17:10:07,916 | INFO     | all payload control threads have been joined
[2025-11-21 12:10:40] 2025-11-21 17:10:07,938 | INFO     | [job] retrieve thread has finished
[2025-11-21 12:10:40] 2025-11-21 17:10:07,938 | INFO     | [job] job monitor thread has finished
[2025-11-21 12:10:40] 2025-11-21 17:10:07,945 | INFO     | [job] control thread has finished
[2025-11-21 12:10:40] 2025-11-21 17:10:08,064 | INFO     | [data] control thread has finished
[2025-11-21 12:10:40] 2025-11-21 17:10:08,299 | INFO     | [job] validate thread has finished
[2025-11-21 12:10:40] 2025-11-21 17:10:08,321 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 12:10:40] 2025-11-21 17:10:08,449 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 12:10:40] 2025-11-21 17:10:08,728 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 12:10:40] 2025-11-21 17:10:08,922 | INFO     | [payload] control thread has finished
[2025-11-21 12:10:40] 2025-11-21 17:10:08,930 | INFO     | [payload] failed_post thread has finished
[2025-11-21 12:10:40] 2025-11-21 17:10:09,171 | INFO     | [data] copytool_out thread has finished
[2025-11-21 12:10:40] 2025-11-21 17:10:09,303 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 12:10:40] 2025-11-21 17:10:09,315 | INFO     | [data] copytool_in thread has finished
[2025-11-21 12:10:40] 2025-11-21 17:10:09,371 | INFO     | [payload] validate_post thread has finished
[2025-11-21 12:10:40] 2025-11-21 17:10:09,424 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 12:10:40] 2025-11-21 17:10:09,431 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 12:10:40] 2025-11-21 17:10:09,455 | INFO     | [job] queue monitor thread has finished
[2025-11-21 12:10:40] 2025-11-21 17:10:13,456 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 12:10:40] 2025-11-21 17:10:22,055 | INFO     | [monitor] cgroup control has ended
[2025-11-21 12:10:40] 2025-11-21 17:10:22,561 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140126035793728)>', '<ExcThread(monitor, started 140125690377984)>']
[2025-11-21 12:10:40] 2025-11-21 17:10:27,587 | INFO     | all workflow threads have been joined
[2025-11-21 12:10:40] 2025-11-21 17:10:27,587 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 12:10:40] 2025-11-21 17:10:27,587 | INFO     | traces error code: 0
[2025-11-21 12:10:40] 2025-11-21 17:10:27,587 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 12:10:40] 2025-11-21 17:10:39,219 | INFO     | PID=2278962 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-21 12:10:40] 2025-11-21 17:10:39,219 | INFO     | .. there are 18 such processes running
[2025-11-21 12:10:40] 2025-11-21 17:10:39,220 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 12:10:40] 2025-11-21 17:10:39,220 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 12:10:40] 2025-11-21 17:10:39,220 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 12:10:40] 2025-11-21 17:10:39,220 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 12:10:40] 2025-11-21 17:10:39,220 | INFO     | [monitor] control thread has ended
[2025-11-21 12:10:40] 2025-11-21 17:10:39,522 [wrapper] ==== pilot stdout END ====
[2025-11-21 12:10:40] 2025-11-21 17:10:39,549 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 12:10:40] 2025-11-21 17:10:39,568 [wrapper] pilotpid: 2278962
[2025-11-21 12:10:40] 2025-11-21 17:10:39,586 [wrapper] Pilot exit status: 0
[2025-11-21 12:10:40] 2025-11-21 17:10:39,679 [wrapper] pandaids: 6893862014
[2025-11-21 12:10:40] 2025-11-21 17:10:39,783 [wrapper] cleanup supervisor_pilot 3583177 2278964
[2025-11-21 12:10:40] 2025-11-21 17:10:39,815 [wrapper] Test setup, not cleaning
[2025-11-21 12:10:40] 2025-11-21 17:10:39,831 [wrapper] apfmon messages muted
[2025-11-21 12:10:40] 2025-11-21 17:10:39,860 [wrapper] ==== wrapper stdout END ====
[2025-11-21 12:10:40] 2025-11-21 17:10:39,888 [wrapper] ==== wrapper stderr END ====
[2025-11-21 12:10:40]  *** Error codes and diagnostics ***
[2025-11-21 12:10:40]     "exeErrorCode": 0,
[2025-11-21 12:10:40]     "exeErrorDiag": "",
[2025-11-21 12:10:40]     "pilotErrorCode": 0,
[2025-11-21 12:10:40]     "pilotErrorDiag": "",
[2025-11-21 12:10:40]  *** Listing of results directory ***
[2025-11-21 12:10:40] total 1307128
[2025-11-21 12:10:40] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 09:06 pilot3.tar.gz
[2025-11-21 12:10:40] -rwx------. 1 boincer umatlas     36292 Nov 20 09:07 runpilot2-wrapper.sh
[2025-11-21 12:10:40] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 09:07 queuedata.json
[2025-11-21 12:10:40] -rw-r--r--. 1 boincer umatlas       100 Nov 21 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 12:10:40] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 21 00:02 run_atlas
[2025-11-21 12:10:40] -rw-r--r--. 1 boincer umatlas       105 Nov 21 00:02 job.xml
[2025-11-21 12:10:40] -rw-r--r--. 2 boincer umatlas 408588180 Nov 21 00:02 EVNT.47493127._000586.pool.root.1
[2025-11-21 12:10:40] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 00:02 start_atlas.sh
[2025-11-21 12:10:40] drwxrwx--x. 2 boincer umatlas      4096 Nov 21 00:02 shared
[2025-11-21 12:10:40] -rw-r--r--. 2 boincer umatlas    590101 Nov 21 00:02 input.tar.gz
[2025-11-21 12:10:40] -rw-r--r--. 1 boincer umatlas         0 Nov 21 00:02 boinc_lockfile
[2025-11-21 12:10:40] -rw-r--r--. 1 boincer umatlas      2786 Nov 21 00:02 pandaJob.out
[2025-11-21 12:10:40] -rw-------. 1 boincer umatlas        57 Nov 21 00:02 setup.sh.local
[2025-11-21 12:10:40] -rw-------. 1 boincer umatlas    989817 Nov 21 00:03 agis_schedconf.cvmfs.json
[2025-11-21 12:10:40] drwx------. 5 boincer umatlas      4096 Nov 21 00:03 pilot3
[2025-11-21 12:10:40] -rw-r--r--. 1 boincer umatlas       533 Nov 21 11:58 boinc_task_state.xml
[2025-11-21 12:10:40] -rw-r--r--. 1 boincer umatlas      6613 Nov 21 12:01 init_data.xml
[2025-11-21 12:10:40] -rw-------. 1 boincer umatlas 909907786 Nov 21 12:08 HITS.47523449._005858.pool.root.1
[2025-11-21 12:10:40] -rw-------. 1 boincer umatlas      1056 Nov 21 12:09 memory_monitor_summary.json
[2025-11-21 12:10:40] -rw-------. 1 boincer umatlas   1526164 Nov 21 12:09 agis_ddmendpoints.agis.ALL.json
[2025-11-21 12:10:40] -rw-------. 1 boincer umatlas   2072754 Nov 21 12:09 log.47523449._005858.job.log.tgz.1
[2025-11-21 12:10:40] -rw-------. 1 boincer umatlas      8619 Nov 21 12:10 heartbeat.json
[2025-11-21 12:10:40] -rw-------. 1 boincer umatlas        95 Nov 21 12:10 pilot_heartbeat.json
[2025-11-21 12:10:40] -rw-------. 1 boincer umatlas       823 Nov 21 12:10 pilotlog.txt
[2025-11-21 12:10:40] -rw-------. 1 boincer umatlas   5965210 Nov 21 12:10 log.47523449._005858.job.log.1
[2025-11-21 12:10:40] -rw-------. 1 boincer umatlas       353 Nov 21 12:10 output.list
[2025-11-21 12:10:40] -rw-r--r--. 1 boincer umatlas      8192 Nov 21 12:10 boinc_mmap_file
[2025-11-21 12:10:40] -rw-r--r--. 1 boincer umatlas       620 Nov 21 12:10 runtime_log
[2025-11-21 12:10:40] -rw-------. 1 boincer umatlas   8058880 Nov 21 12:10 result.tar.gz
[2025-11-21 12:10:40] -rw-r--r--. 1 boincer umatlas        29 Nov 21 12:10 wrapper_checkpoint.txt
[2025-11-21 12:10:40] -rw-r--r--. 1 boincer umatlas      9338 Nov 21 12:10 runtime_log.err
[2025-11-21 12:10:40] -rw-------. 1 boincer umatlas       659 Nov 21 12:10 OhSKDmNVKg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmG2HKDmYZ64Rm.diag
[2025-11-21 12:10:40] -rw-r--r--. 1 boincer umatlas     21130 Nov 21 12:10 stderr.txt
[2025-11-21 12:10:40] HITS file was successfully produced:
[2025-11-21 12:10:40] -rw-------. 1 boincer umatlas 909907786 Nov 21 12:08 shared/HITS.pool.root.1
[2025-11-21 12:10:40]  *** Contents of shared directory: ***
[2025-11-21 12:10:40] total 1296072
[2025-11-21 12:10:40] -rw-r--r--. 2 boincer umatlas 408588180 Nov 21 00:02 ATLAS.root_0
[2025-11-21 12:10:40] -rw-r--r--. 2 boincer umatlas     15847 Nov 21 00:02 start_atlas.sh
[2025-11-21 12:10:40] -rw-r--r--. 2 boincer umatlas    590101 Nov 21 00:02 input.tar.gz
[2025-11-21 12:10:40] -rw-------. 1 boincer umatlas 909907786 Nov 21 12:08 HITS.pool.root.1
[2025-11-21 12:10:40] -rw-------. 1 boincer umatlas   8058880 Nov 21 12:10 result.tar.gz
12:10:42 (2271803): run_atlas exited; CPU time 321022.426118
12:10:42 (2271803): called boinc_finish(0)

</stderr_txt>
]]>

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