Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:47:38 (14690): wrapper (7.7.26015): starting
03:47:38 (14690): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 03:47:38] Arguments: --nthreads 8
[2025-11-24 03:47:38] Threads: 8
[2025-11-24 03:47:38] Checking for CVMFS
[2025-11-24 03:47:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 03:47:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 03:47:40] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 03:47:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 03:47:41] 2.11.2.0 10419 81803 118140 153229 1 85 16575083 25165824 4632 130560 2 26548364 99.873 13875957 1734 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-24 03:47:41] CVMFS is ok
[2025-11-24 03:47:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 03:47:41] Checking for apptainer binary...
[2025-11-24 03:47:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 03:47:41] Running /usr/bin/apptainer --version
[2025-11-24 03:47:41] apptainer version 1.3.2-1.el7
[2025-11-24 03:47:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 03:47:49] cg-vwn422.simple-grid.lan
[2025-11-24 03:47:49] apptainer works
[2025-11-24 03:47:49] Set ATHENA_PROC_NUMBER=8
[2025-11-24 03:47:49] Set ATHENA_CORE_NUMBER=8
[2025-11-24 03:47:49] Starting ATLAS job with PandaID=6893862020
[2025-11-24 03:47:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 01:24:20]  *** The last 200 lines of the pilot log: ***
[2025-11-25 01:24:20] 2025-11-25 00:23:07,142 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 01:24:20] 2025-11-25 00:23:08,097 | INFO     | time since job start (77473s) is within the limit (172800.0s)
[2025-11-25 01:24:20] 2025-11-25 00:23:09,328 | INFO     | PID=18492 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 01:24:20] 2025-11-25 00:23:09,334 | INFO     | .. there are 9 such processes running
[2025-11-25 01:24:20] 2025-11-25 00:23:09,646 | INFO     | monitor loop #5203: job 0:6893862020 is in state 'finished'
[2025-11-25 01:24:20] 2025-11-25 00:23:09,646 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 01:24:20] 2025-11-25 00:23:10,335 | INFO     | time since job start (77475s) is within the limit (172800.0s)
[2025-11-25 01:24:20] 2025-11-25 00:23:12,152 | INFO     | monitor loop #5204: job 0:6893862020 is in state 'finished'
[2025-11-25 01:24:20] 2025-11-25 00:23:12,152 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 01:24:20] 2025-11-25 00:23:12,342 | INFO     | time since job start (77477s) is within the limit (172800.0s)
[2025-11-25 01:24:20] 2025-11-25 00:23:14,353 | INFO     | time since job start (77479s) is within the limit (172800.0s)
[2025-11-25 01:24:20] 2025-11-25 00:23:14,659 | INFO     | monitor loop #5205: job 0:6893862020 is in state 'finished'
[2025-11-25 01:24:20] 2025-11-25 00:23:14,659 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 01:24:20] 2025-11-25 00:23:16,359 | INFO     | time since job start (77481s) is within the limit (172800.0s)
[2025-11-25 01:24:20] 2025-11-25 00:23:17,167 | INFO     | monitor loop #5206: job 0:6893862020 is in state 'finished'
[2025-11-25 01:24:20] 2025-11-25 00:23:17,167 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 01:24:20] 2025-11-25 00:23:17,210 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 01:24:20] 2025-11-25 00:23:17,211 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-25 01:24:20] 2025-11-25 00:23:17,213 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6893862020/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 01:24:20] 2025-11-25 00:23:17,214 | INFO     | extracted standard info from prmon json
[2025-11-25 01:24:20] 2025-11-25 00:23:17,214 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 01:24:20] 2025-11-25 00:23:17,214 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 01:24:20] 2025-11-25 00:23:17,239 | INFO     | fitting pss+swap vs Time
[2025-11-25 01:24:20] 2025-11-25 00:23:17,242 | INFO     | sum of square deviations: 620287323226.136
[2025-11-25 01:24:20] 2025-11-25 00:23:17,286 | INFO     | sum of deviations: 2371940315475.9326
[2025-11-25 01:24:20] 2025-11-25 00:23:17,287 | INFO     | mean x: 1763991652.5928571
[2025-11-25 01:24:20] 2025-11-25 00:23:17,287 | INFO     | mean y: 2834154.76984127
[2025-11-25 01:24:20] 2025-11-25 00:23:17,287 | INFO     | intersect: -6742560697.387466
[2025-11-25 01:24:20] 2025-11-25 00:23:17,289 | INFO     | chi2: 26.53318793559205
[2025-11-25 01:24:20] 2025-11-25 00:23:17,291 | INFO     | sum of square deviations: 612932684370.1406
[2025-11-25 01:24:20] 2025-11-25 00:23:17,334 | INFO     | sum of deviations: 2780341920047.955
[2025-11-25 01:24:20] 2025-11-25 00:23:17,334 | INFO     | mean x: 1763991500.0972111
[2025-11-25 01:24:20] 2025-11-25 00:23:17,334 | INFO     | mean y: 2842621.557768924
[2025-11-25 01:24:20] 2025-11-25 00:23:17,334 | INFO     | intersect: -7998850940.221358
[2025-11-25 01:24:20] 2025-11-25 00:23:17,336 | INFO     | chi2: 23.342801377812016
[2025-11-25 01:24:20] 2025-11-25 00:23:17,336 | INFO     | current chi2=23.342801377812016 (change=12.024135831414352 %)
[2025-11-25 01:24:20] 2025-11-25 00:23:17,336 | INFO     | right removable region: 1254
[2025-11-25 01:24:20] 2025-11-25 00:23:17,338 | INFO     | sum of square deviations: 612931844400.1411
[2025-11-25 01:24:20] 2025-11-25 00:23:17,389 | INFO     | sum of deviations: 1838473433053.0098
[2025-11-25 01:24:20] 2025-11-25 00:23:17,389 | INFO     | mean x: 1763991805.0972111
[2025-11-25 01:24:20] 2025-11-25 00:23:17,390 | INFO     | mean y: 2845214.917928287
[2025-11-25 01:24:20] 2025-11-25 00:23:17,390 | INFO     | intersect: -5288203209.835279
[2025-11-25 01:24:20] 2025-11-25 00:23:17,391 | INFO     | chi2: 21.737588875981853
[2025-11-25 01:24:20] 2025-11-25 00:23:17,391 | INFO     | current chi2=21.737588875981853 (change=18.07396484452327 %)
[2025-11-25 01:24:20] 2025-11-25 00:23:17,392 | INFO     | left removable region: 10
[2025-11-25 01:24:20] 2025-11-25 00:23:17,393 | INFO     | sum of square deviations: 596955945118.7817
[2025-11-25 01:24:20] 2025-11-25 00:23:17,450 | INFO     | sum of deviations: 1905573582944.952
[2025-11-25 01:24:20] 2025-11-25 00:23:17,450 | INFO     | mean x: 1763991774.606913
[2025-11-25 01:24:20] 2025-11-25 00:23:17,450 | INFO     | mean y: 2865137.58681672
[2025-11-25 01:24:20] 2025-11-25 00:23:17,450 | INFO     | intersect: -5628063164.089228
[2025-11-25 01:24:20] 2025-11-25 00:23:17,452 | INFO     | chi2: 14.419712660472833
[2025-11-25 01:24:20] 2025-11-25 00:23:17,452 | INFO     | current memory leak: 3.19 B/s (using 1244 data points, chi2=14.42)
[2025-11-25 01:24:20] 2025-11-25 00:23:17,454 | INFO     | could have reported an average CPU frequency of 1999 MHz (43 samples)
[2025-11-25 01:24:20] 2025-11-25 00:23:17,455 | INFO     | ..............................
[2025-11-25 01:24:20] 2025-11-25 00:23:17,455 | INFO     | . Timing measurements:
[2025-11-25 01:24:20] 2025-11-25 00:23:17,455 | INFO     | . get job = 0 s
[2025-11-25 01:24:20] 2025-11-25 00:23:17,455 | INFO     | . initial setup = 13 s
[2025-11-25 01:24:20] 2025-11-25 00:23:17,455 | INFO     | . payload setup = 167 s
[2025-11-25 01:24:20] 2025-11-25 00:23:17,455 | INFO     | . stage-in = 0 s
[2025-11-25 01:24:20] 2025-11-25 00:23:17,455 | INFO     | . payload execution = 77005 s
[2025-11-25 01:24:20] 2025-11-25 00:23:17,455 | INFO     | . stage-out = 6 s
[2025-11-25 01:24:20] 2025-11-25 00:23:17,455 | INFO     | . log creation = 2 s
[2025-11-25 01:24:20] 2025-11-25 00:23:17,455 | INFO     | ..............................
[2025-11-25 01:24:20] 2025-11-25 00:23:17,991 | INFO     | 
[2025-11-25 01:24:20] 2025-11-25 00:23:17,991 | INFO     | job summary report
[2025-11-25 01:24:20] 2025-11-25 00:23:17,991 | INFO     | --------------------------------------------------
[2025-11-25 01:24:20] 2025-11-25 00:23:17,991 | INFO     | PanDA job id: 6893862020
[2025-11-25 01:24:20] 2025-11-25 00:23:17,992 | INFO     | task id: 47523449
[2025-11-25 01:24:20] 2025-11-25 00:23:17,992 | INFO     | errors: (none)
[2025-11-25 01:24:20] 2025-11-25 00:23:17,992 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 01:24:20] 2025-11-25 00:23:17,992 | INFO     | pilot state: finished 
[2025-11-25 01:24:20] 2025-11-25 00:23:17,992 | INFO     | transexitcode: 0
[2025-11-25 01:24:20] 2025-11-25 00:23:17,992 | INFO     | exeerrorcode: 0
[2025-11-25 01:24:20] 2025-11-25 00:23:17,992 | INFO     | exeerrordiag: 
[2025-11-25 01:24:20] 2025-11-25 00:23:17,992 | INFO     | exitcode: 0
[2025-11-25 01:24:20] 2025-11-25 00:23:17,992 | INFO     | exitmsg: OK
[2025-11-25 01:24:20] 2025-11-25 00:23:17,992 | INFO     | cpuconsumptiontime: 342157 s
[2025-11-25 01:24:20] 2025-11-25 00:23:17,992 | INFO     | nevents: 1000
[2025-11-25 01:24:20] 2025-11-25 00:23:17,992 | INFO     | neventsw: 0
[2025-11-25 01:24:20] 2025-11-25 00:23:17,993 | INFO     | pid: 25029
[2025-11-25 01:24:20] 2025-11-25 00:23:17,993 | INFO     | pgrp: 25029
[2025-11-25 01:24:20] 2025-11-25 00:23:17,993 | INFO     | corecount: 8
[2025-11-25 01:24:20] 2025-11-25 00:23:17,993 | INFO     | event service: False
[2025-11-25 01:24:20] 2025-11-25 00:23:17,993 | INFO     | sizes: {0: 2298579, 1: 2298663, 2: 2298862, 13: 2298862, 24: 2298918, 34: 2298946, 45: 2299102, 56: 2299130, 66: 2299158, 77: 2299186, 88: 2299242, 99: 2299840, 10
[2025-11-25 01:24:20] 2025-11-25 00:23:17,993 | INFO     | --------------------------------------------------
[2025-11-25 01:24:20] 2025-11-25 00:23:17,993 | INFO     | 
[2025-11-25 01:24:20] 2025-11-25 00:23:17,993 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-11-25 01:24:20] 2025-11-25 00:23:18,178 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 01:24:20] 2025-11-25 00:23:18,179 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 01:24:20] 2025-11-25 00:23:18,179 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 01:24:20] 2025-11-25 00:23:18,179 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 01:24:20] 2025-11-25 00:23:18,179 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 01:24:20] 2025-11-25 00:23:18,179 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 01:24:20] 2025-11-25 00:23:18,179 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 01:24:20] 2025-11-25 00:23:18,179 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 01:24:20] 2025-11-25 00:23:18,180 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 01:24:20] 2025-11-25 00:23:18,180 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 01:24:20] 2025-11-25 00:23:18,180 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 01:24:20] 2025-11-25 00:23:18,180 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 01:24:20] 2025-11-25 00:23:18,180 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 01:24:20] 2025-11-25 00:23:18,180 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 01:24:20] 2025-11-25 00:23:18,180 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 01:24:20] 2025-11-25 00:23:18,180 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 01:24:20] 2025-11-25 00:23:18,180 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 01:24:20] 2025-11-25 00:23:18,180 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 01:24:20] 2025-11-25 00:23:18,181 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 01:24:20] 2025-11-25 00:23:18,181 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 01:24:20] 2025-11-25 00:23:18,181 | INFO     | job 6893862020 has completed (purged errors)
[2025-11-25 01:24:20] 2025-11-25 00:23:18,181 | INFO     | overall cleanup function is called
[2025-11-25 01:24:20] 2025-11-25 00:23:19,204 | INFO     | --- collectZombieJob: --- 10, [25029]
[2025-11-25 01:24:20] 2025-11-25 00:23:19,204 | INFO     | zombie collector waiting for pid 25029
[2025-11-25 01:24:20] 2025-11-25 00:23:19,204 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 01:24:20] 2025-11-25 00:23:19,204 | INFO     | collected zombie processes
[2025-11-25 01:24:20] 2025-11-25 00:23:19,205 | INFO     | will attempt to kill all subprocesses of pid=25029
[2025-11-25 01:24:20] 2025-11-25 00:23:19,332 | INFO     | process IDs to be killed: [25029] (in reverse order)
[2025-11-25 01:24:20] 2025-11-25 00:23:19,404 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 01:24:20] 2025-11-25 00:23:19,405 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 01:24:20] 2025-11-25 00:23:19,409 | INFO     | did not find any defunct processes belonging to 25029
[2025-11-25 01:24:20] 2025-11-25 00:23:19,412 | INFO     | did not find any defunct processes belonging to 25029
[2025-11-25 01:24:20] 2025-11-25 00:23:19,415 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 01:24:20] 2025-11-25 00:23:19,415 | INFO     | ready for new job
[2025-11-25 01:24:20] 2025-11-25 00:23:19,415 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 01:24:20] 2025-11-25 00:23:19,422 | INFO     | ***************************************
[2025-11-25 01:24:20] 2025-11-25 00:23:19,422 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 01:24:20] 2025-11-25 00:23:19,422 | INFO     | ***************************************
[2025-11-25 01:24:20] 2025-11-25 00:23:19,422 | INFO     | 
[2025-11-25 01:24:20] 2025-11-25 00:23:19,423 | INFO     | pilot is running in a VM
[2025-11-25 01:24:20] 2025-11-25 00:23:19,423 | INFO     | architecture information:
[2025-11-25 01:24:20] 2025-11-25 00:23:19,424 | INFO     | executing command: cat /etc/os-release
[2025-11-25 01:24:20] 2025-11-25 00:23:19,447 | INFO     | cat /etc/os-release:
[2025-11-25 01:24:20] NAME="CentOS Linux"
[2025-11-25 01:24:20] VERSION="7 (Core)"
[2025-11-25 01:24:20] ID="centos"
[2025-11-25 01:24:20] ID_LIKE="rhel fedora"
[2025-11-25 01:24:20] VERSION_ID="7"
[2025-11-25 01:24:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 01:24:20] ANSI_COLOR="0;31"
[2025-11-25 01:24:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 01:24:20] HOME_URL="https://www.centos.org/"
[2025-11-25 01:24:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 01:24:20] 
[2025-11-25 01:24:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 01:24:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 01:24:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 01:24:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 01:24:20] 
[2025-11-25 01:24:20] 2025-11-25 00:23:19,448 | INFO     | ***************************************
[2025-11-25 01:24:20] 2025-11-25 00:23:19,951 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-11-25 01:24:20] 2025-11-25 00:23:19,998 | INFO     | sufficient remaining disk space (494775828480 B)
[2025-11-25 01:24:20] 2025-11-25 00:23:19,998 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 01:24:20] 2025-11-25 00:23:19,999 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 01:24:20] 2025-11-25 00:23:19,999 | INFO     | update_server=False
[2025-11-25 01:24:20] 2025-11-25 00:23:19,999 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 01:24:20] 2025-11-25 00:23:20,000 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 01:24:20] 2025-11-25 00:23:20,424 | INFO     | all job control threads have been joined
[2025-11-25 01:24:20] 2025-11-25 00:23:20,582 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 01:24:20] 2025-11-25 00:23:20,678 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 01:24:20] 2025-11-25 00:23:20,678 | INFO     | aborting loop
[2025-11-25 01:24:20] 2025-11-25 00:23:20,951 | INFO     | all data control threads have been joined
[2025-11-25 01:24:20] 2025-11-25 00:23:21,005 | INFO     | [job] retrieve thread has finished
[2025-11-25 01:24:20] 2025-11-25 00:23:21,271 | INFO     | [payload] validate_post thread has finished
[2025-11-25 01:24:20] 2025-11-25 00:23:21,345 | INFO     | all payload control threads have been joined
[2025-11-25 01:24:20] 2025-11-25 00:23:21,430 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 01:24:20] 2025-11-25 00:23:21,431 | INFO     | [job] control thread has finished
[2025-11-25 01:24:20] 2025-11-25 00:23:21,450 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 01:24:20] 2025-11-25 00:23:21,483 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 01:24:20] 2025-11-25 00:23:21,684 | INFO     | [job] job monitor thread has finished
[2025-11-25 01:24:20] 2025-11-25 00:23:21,823 | INFO     | [data] copytool_in thread has finished
[2025-11-25 01:24:20] 2025-11-25 00:23:21,957 | INFO     | [data] control thread has finished
[2025-11-25 01:24:20] 2025-11-25 00:23:22,007 | INFO     | [data] copytool_out thread has finished
[2025-11-25 01:24:20] 2025-11-25 00:23:22,162 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 01:24:20] 2025-11-25 00:23:22,202 | INFO     | [payload] failed_post thread has finished
[2025-11-25 01:24:20] 2025-11-25 00:23:22,280 | INFO     | [job] validate thread has finished
[2025-11-25 01:24:20] 2025-11-25 00:23:22,351 | INFO     | [payload] control thread has finished
[2025-11-25 01:24:20] 2025-11-25 00:23:22,631 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 01:24:20] 2025-11-25 00:23:23,637 | INFO     | [job] queue monitor thread has finished
[2025-11-25 01:24:20] 2025-11-25 00:23:24,591 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 01:24:20] 2025-11-25 00:23:49,552 | INFO     | PID=18492 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-25 01:24:20] 2025-11-25 00:23:49,553 | INFO     | .. there are 9 such processes running
[2025-11-25 01:24:20] 2025-11-25 00:23:49,555 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 01:24:20] 2025-11-25 00:23:49,555 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 01:24:20] 2025-11-25 00:23:49,555 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 01:24:20] 2025-11-25 00:24:09,868 | INFO     | [monitor] cgroup control has ended
[2025-11-25 01:24:20] 2025-11-25 00:24:11,482 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140294874511168)>', '<ExcThread(monitor, started 140294158804736)>']
[2025-11-25 01:24:20] 2025-11-25 00:24:11,684 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 01:24:20] 2025-11-25 00:24:11,684 | INFO     | [monitor] control thread has ended
[2025-11-25 01:24:20] 2025-11-25 00:24:16,508 | INFO     | all workflow threads have been joined
[2025-11-25 01:24:20] 2025-11-25 00:24:16,508 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 01:24:20] 2025-11-25 00:24:16,508 | INFO     | traces error code: 0
[2025-11-25 01:24:20] 2025-11-25 00:24:16,509 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 01:24:20] 2025-11-25 00:24:16,749 [wrapper] ==== pilot stdout END ====
[2025-11-25 01:24:20] 2025-11-25 00:24:16,753 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 01:24:20] 2025-11-25 00:24:16,765 [wrapper] pilotpid: 18492
[2025-11-25 01:24:20] 2025-11-25 00:24:16,784 [wrapper] Pilot exit status: 0
[2025-11-25 01:24:20] 2025-11-25 00:24:17,026 [wrapper] pandaids: 6893862020
[2025-11-25 01:24:20] 2025-11-25 00:24:17,960 [wrapper] cleanup supervisor_pilot 23065 18493
[2025-11-25 01:24:20] 2025-11-25 00:24:18,042 [wrapper] Test setup, not cleaning
[2025-11-25 01:24:20] 2025-11-25 00:24:18,136 [wrapper] apfmon messages muted
[2025-11-25 01:24:20] 2025-11-25 00:24:18,231 [wrapper] ==== wrapper stdout END ====
[2025-11-25 01:24:20] 2025-11-25 00:24:18,331 [wrapper] ==== wrapper stderr END ====
[2025-11-25 01:24:20]  *** Error codes and diagnostics ***
[2025-11-25 01:24:20]     "exeErrorCode": 0,
[2025-11-25 01:24:20]     "exeErrorDiag": "",
[2025-11-25 01:24:20]     "pilotErrorCode": 0,
[2025-11-25 01:24:20]     "pilotErrorDiag": "",
[2025-11-25 01:24:20]  *** Listing of results directory ***
[2025-11-25 01:24:20] total 1345764
[2025-11-25 01:24:20] -rw-r--r--. 1 boinc boinc    576529 Nov 20 15:06 pilot3.tar.gz
[2025-11-25 01:24:20] -rw-r--r--. 1 boinc boinc      5112 Nov 20 15:10 queuedata.json
[2025-11-25 01:24:20] -rwx------. 1 boinc boinc     36292 Nov 20 15:11 runpilot2-wrapper.sh
[2025-11-25 01:24:20] -rw-r--r--. 1 boinc boinc       100 Nov 24 03:47 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 01:24:20] -rwxr-xr-x. 1 boinc boinc      7986 Nov 24 03:47 run_atlas
[2025-11-25 01:24:20] -rw-r--r--. 1 boinc boinc       105 Nov 24 03:47 job.xml
[2025-11-25 01:24:20] -rw-r--r--. 1 boinc boinc      6391 Nov 24 03:47 init_data.xml
[2025-11-25 01:24:20] -rw-r--r--. 2 boinc boinc 411842110 Nov 24 03:47 EVNT.47493127._000587.pool.root.1
[2025-11-25 01:24:20] -rw-r--r--. 2 boinc boinc     15847 Nov 24 03:47 start_atlas.sh
[2025-11-25 01:24:20] drwxrwx--x. 2 boinc boinc        68 Nov 24 03:47 shared
[2025-11-25 01:24:20] -rw-r--r--. 2 boinc boinc    590102 Nov 24 03:47 input.tar.gz
[2025-11-25 01:24:20] -rw-r--r--. 1 boinc boinc         0 Nov 24 03:47 boinc_lockfile
[2025-11-25 01:24:20] -rw-r--r--. 1 boinc boinc      2785 Nov 24 03:47 pandaJob.out
[2025-11-25 01:24:20] -rw-------. 1 boinc boinc    989786 Nov 24 03:51 agis_schedconf.cvmfs.json
[2025-11-25 01:24:20] drwx------. 5 boinc boinc      4096 Nov 24 03:51 pilot3
[2025-11-25 01:24:20] -rw-r--r--. 1 boinc boinc       533 Nov 25 00:54 boinc_task_state.xml
[2025-11-25 01:24:20] -rw-------. 1 boinc boinc 936940961 Nov 25 01:20 HITS.47523449._005864.pool.root.1
[2025-11-25 01:24:20] -rw-------. 1 boinc boinc      1033 Nov 25 01:21 memory_monitor_summary.json
[2025-11-25 01:24:20] -rw-------. 1 boinc boinc   1516227 Nov 25 01:21 agis_ddmendpoints.agis.ALL.json
[2025-11-25 01:24:20] -rw-------. 1 boinc boinc   2392324 Nov 25 01:21 log.47523449._005864.job.log.tgz.1
[2025-11-25 01:24:20] -rw-------. 1 boinc boinc      7958 Nov 25 01:23 heartbeat.json
[2025-11-25 01:24:20] -rw-------. 1 boinc boinc        95 Nov 25 01:23 pilot_heartbeat.json
[2025-11-25 01:24:20] -rw-r--r--. 1 boinc boinc        29 Nov 25 01:23 wrapper_checkpoint.txt
[2025-11-25 01:24:20] -rw-r--r--. 1 boinc boinc      8192 Nov 25 01:23 boinc_mmap_file
[2025-11-25 01:24:20] -rw-------. 1 boinc boinc      4884 Nov 25 01:24 pilotlog.txt
[2025-11-25 01:24:20] -rw-------. 1 boinc boinc  10296875 Nov 25 01:24 log.47523449._005864.job.log.1
[2025-11-25 01:24:20] -rw-------. 1 boinc boinc       353 Nov 25 01:24 output.list
[2025-11-25 01:24:20] -rw-r--r--. 1 boinc boinc       620 Nov 25 01:24 runtime_log
[2025-11-25 01:24:20] -rw-------. 1 boinc boinc  12707840 Nov 25 01:24 result.tar.gz
[2025-11-25 01:24:20] -rw-r--r--. 1 boinc boinc      8817 Nov 25 01:24 runtime_log.err
[2025-11-25 01:24:20] -rw-------. 1 boinc boinc       662 Nov 25 01:24 fNgKDmSYKg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm42HKDm8Rdvon.diag
[2025-11-25 01:24:20] -rw-r--r--. 1 boinc boinc     21516 Nov 25 01:24 stderr.txt
[2025-11-25 01:24:20] HITS file was successfully produced:
[2025-11-25 01:24:20] -rw-------. 1 boinc boinc 936940961 Nov 25 01:20 shared/HITS.pool.root.1
[2025-11-25 01:24:20]  *** Contents of shared directory: ***
[2025-11-25 01:24:20] total 1330184
[2025-11-25 01:24:20] -rw-r--r--. 2 boinc boinc 411842110 Nov 24 03:47 ATLAS.root_0
[2025-11-25 01:24:20] -rw-r--r--. 2 boinc boinc     15847 Nov 24 03:47 start_atlas.sh
[2025-11-25 01:24:20] -rw-r--r--. 2 boinc boinc    590102 Nov 24 03:47 input.tar.gz
[2025-11-25 01:24:20] -rw-------. 1 boinc boinc 936940961 Nov 25 01:20 HITS.pool.root.1
[2025-11-25 01:24:20] -rw-------. 1 boinc boinc  12707840 Nov 25 01:24 result.tar.gz
01:24:22 (14690): run_atlas exited; CPU time 342537.332089
01:24:22 (14690): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN