Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:58:55 (216380): wrapper (7.7.26015): starting
18:58:55 (216380): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 18:58:55] Arguments: --nthreads 8
[2025-11-20 18:58:55] Threads: 8
[2025-11-20 18:58:55] Checking for CVMFS
[2025-11-20 18:58:56] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 18:58:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 18:58:57] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 18:58:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 18:58:58] 2.13.2.0 6320 27897 226304 153101 1 175 38661914 40960000 8057 16776704 0 22161122 99.643 17010773 34464 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-20 18:58:58] CVMFS is ok
[2025-11-20 18:58:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 18:58:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 18:58:58] Further information can be found at the LHC@home message board.
[2025-11-20 18:58:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 18:58:58] Checking for apptainer binary...
[2025-11-20 18:58:58] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 18:58:58] Running /usr/bin/apptainer --version
[2025-11-20 18:58:58] apptainer version 1.4.4-1.el9
[2025-11-20 18:58:58] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 18:58:58] c-210-37-1.aglt2.org
[2025-11-20 18:58:58] apptainer works
[2025-11-20 18:58:58] Set ATHENA_PROC_NUMBER=8
[2025-11-20 18:58:58] Set ATHENA_CORE_NUMBER=8
[2025-11-20 18:58:59] Starting ATLAS job with PandaID=6893849968
[2025-11-20 18:58:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 05:58:06]  *** The last 200 lines of the pilot log: ***
[2025-11-21 05:58:06] 2025-11-21 10:57:14,207 | INFO     | time since job start (39442s) is within the limit (172800.0s)
[2025-11-21 05:58:06] 2025-11-21 10:57:14,343 | INFO     | monitor loop #2740: job 0:6893849968 is in state 'finished'
[2025-11-21 05:58:06] 2025-11-21 10:57:14,343 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 05:58:06] 2025-11-21 10:57:15,256 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-21 05:58:06] 2025-11-21 10:57:15,260 | INFO     | found 28 cores (14 cores per socket, 2 sockets) HT, CPU MHz: 3056.5126785714283
[2025-11-21 05:58:06] 2025-11-21 10:57:15,266 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6893849968/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 05:58:06] 2025-11-21 10:57:15,266 | INFO     | extracted standard info from prmon json
[2025-11-21 05:58:06] 2025-11-21 10:57:15,266 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 05:58:06] 2025-11-21 10:57:15,266 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 05:58:06] 2025-11-21 10:57:15,272 | INFO     | fitting pss+swap vs Time
[2025-11-21 05:58:06] 2025-11-21 10:57:15,272 | INFO     | sum of square deviations: 83202940026.47433
[2025-11-21 05:58:06] 2025-11-21 10:57:15,277 | INFO     | sum of deviations: 879506933246.2415
[2025-11-21 05:58:06] 2025-11-21 10:57:15,277 | INFO     | mean x: 1763702954.7860465
[2025-11-21 05:58:06] 2025-11-21 10:57:15,277 | INFO     | mean y: 2860659.8713178295
[2025-11-21 05:58:06] 2025-11-21 10:57:15,277 | INFO     | intersect: -18640578819.883095
[2025-11-21 05:58:06] 2025-11-21 10:57:15,278 | INFO     | chi2: 6.585872418483236
[2025-11-21 05:58:06] 2025-11-21 10:57:15,278 | INFO     | sum of square deviations: 81283021448.36093
[2025-11-21 05:58:06] 2025-11-21 10:57:15,282 | INFO     | sum of deviations: 1043095094360.7611
[2025-11-21 05:58:06] 2025-11-21 10:57:15,282 | INFO     | mean x: 1763702802.2921875
[2025-11-21 05:58:06] 2025-11-21 10:57:15,282 | INFO     | mean y: 2873639.0921875
[2025-11-21 05:58:06] 2025-11-21 10:57:15,283 | INFO     | intersect: -22630509178.1309
[2025-11-21 05:58:06] 2025-11-21 10:57:15,283 | INFO     | chi2: 4.6099212021060545
[2025-11-21 05:58:06] 2025-11-21 10:57:15,283 | INFO     | current chi2=4.6099212021060545 (change=30.002877232053248 %)
[2025-11-21 05:58:06] 2025-11-21 10:57:15,283 | INFO     | sum of square deviations: 79392870870.19861
[2025-11-21 05:58:06] 2025-11-21 10:57:15,288 | INFO     | sum of deviations: 1070442932697.661
[2025-11-21 05:58:06] 2025-11-21 10:57:15,288 | INFO     | mean x: 1763702649.7984252
[2025-11-21 05:58:06] 2025-11-21 10:57:15,288 | INFO     | mean y: 2875829.6614173227
[2025-11-21 05:58:06] 2025-11-21 10:57:15,288 | INFO     | intersect: -23776879407.348557
[2025-11-21 05:58:06] 2025-11-21 10:57:15,288 | INFO     | chi2: 4.365155565601984
[2025-11-21 05:58:06] 2025-11-21 10:57:15,288 | INFO     | current chi2=4.365155565601984 (change=5.309540570720582 %)
[2025-11-21 05:58:06] 2025-11-21 10:57:15,288 | INFO     | right removable region: 634
[2025-11-21 05:58:06] 2025-11-21 10:57:15,289 | INFO     | sum of square deviations: 81282712178.36102
[2025-11-21 05:58:06] 2025-11-21 10:57:15,293 | INFO     | sum of deviations: 641861592432.1282
[2025-11-21 05:58:06] 2025-11-21 10:57:15,293 | INFO     | mean x: 1763703107.2921875
[2025-11-21 05:58:06] 2025-11-21 10:57:15,293 | INFO     | mean y: 2879525.865625
[2025-11-21 05:58:06] 2025-11-21 10:57:15,293 | INFO     | intersect: -13924476669.38483
[2025-11-21 05:58:06] 2025-11-21 10:57:15,293 | INFO     | chi2: 3.0077813092436525
[2025-11-21 05:58:06] 2025-11-21 10:57:15,293 | INFO     | current chi2=3.0077813092436525 (change=54.32979690280181 %)
[2025-11-21 05:58:06] 2025-11-21 10:57:15,294 | INFO     | sum of square deviations: 79392369085.97467
[2025-11-21 05:58:06] 2025-11-21 10:57:15,298 | INFO     | sum of deviations: 547340392121.461
[2025-11-21 05:58:06] 2025-11-21 10:57:15,298 | INFO     | mean x: 1763703259.7937007
[2025-11-21 05:58:06] 2025-11-21 10:57:15,298 | INFO     | mean y: 2887134.965354331
[2025-11-21 05:58:06] 2025-11-21 10:57:15,298 | INFO     | intersect: -12156291951.326952
[2025-11-21 05:58:06] 2025-11-21 10:57:15,298 | INFO     | chi2: 2.387153832468244
[2025-11-21 05:58:06] 2025-11-21 10:57:15,299 | INFO     | current chi2=2.387153832468244 (change=20.63406255195706 %)
[2025-11-21 05:58:06] 2025-11-21 10:57:15,299 | INFO     | left removable region: 20
[2025-11-21 05:58:06] 2025-11-21 10:57:15,299 | INFO     | sum of square deviations: 71773203513.20572
[2025-11-21 05:58:06] 2025-11-21 10:57:15,303 | INFO     | sum of deviations: 662416518371.6775
[2025-11-21 05:58:06] 2025-11-21 10:57:15,303 | INFO     | mean x: 1763703229.3094463
[2025-11-21 05:58:06] 2025-11-21 10:57:15,303 | INFO     | mean y: 2909048.2280130293
[2025-11-21 05:58:06] 2025-11-21 10:57:15,303 | INFO     | intersect: -16274839406.807695
[2025-11-21 05:58:06] 2025-11-21 10:57:15,303 | INFO     | chi2: 0.0679079647444527
[2025-11-21 05:58:06] 2025-11-21 10:57:15,304 | INFO     | current memory leak: 9.23 B/s (using 614 data points, chi2=0.07)
[2025-11-21 05:58:06] 2025-11-21 10:57:15,304 | INFO     | could have reported an average CPU frequency of 3036 MHz (25 samples)
[2025-11-21 05:58:06] 2025-11-21 10:57:15,304 | INFO     | ..............................
[2025-11-21 05:58:06] 2025-11-21 10:57:15,304 | INFO     | . Timing measurements:
[2025-11-21 05:58:06] 2025-11-21 10:57:15,304 | INFO     | . get job = 0 s
[2025-11-21 05:58:06] 2025-11-21 10:57:15,304 | INFO     | . initial setup = 4 s
[2025-11-21 05:58:06] 2025-11-21 10:57:15,304 | INFO     | . payload setup = 35 s
[2025-11-21 05:58:06] 2025-11-21 10:57:15,304 | INFO     | . stage-in = 0 s
[2025-11-21 05:58:06] 2025-11-21 10:57:15,304 | INFO     | . payload execution = 39333 s
[2025-11-21 05:58:06] 2025-11-21 10:57:15,304 | INFO     | . stage-out = 2 s
[2025-11-21 05:58:06] 2025-11-21 10:57:15,304 | INFO     | . log creation = 0 s
[2025-11-21 05:58:06] 2025-11-21 10:57:15,304 | INFO     | ..............................
[2025-11-21 05:58:06] 2025-11-21 10:57:15,348 | INFO     | 
[2025-11-21 05:58:06] 2025-11-21 10:57:15,348 | INFO     | job summary report
[2025-11-21 05:58:06] 2025-11-21 10:57:15,348 | INFO     | --------------------------------------------------
[2025-11-21 05:58:06] 2025-11-21 10:57:15,348 | INFO     | PanDA job id: 6893849968
[2025-11-21 05:58:06] 2025-11-21 10:57:15,348 | INFO     | task id: 47523449
[2025-11-21 05:58:06] 2025-11-21 10:57:15,349 | INFO     | errors: (none)
[2025-11-21 05:58:06] 2025-11-21 10:57:15,349 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 05:58:06] 2025-11-21 10:57:15,349 | INFO     | pilot state: finished 
[2025-11-21 05:58:06] 2025-11-21 10:57:15,349 | INFO     | transexitcode: 0
[2025-11-21 05:58:06] 2025-11-21 10:57:15,349 | INFO     | exeerrorcode: 0
[2025-11-21 05:58:06] 2025-11-21 10:57:15,349 | INFO     | exeerrordiag: 
[2025-11-21 05:58:06] 2025-11-21 10:57:15,349 | INFO     | exitcode: 0
[2025-11-21 05:58:06] 2025-11-21 10:57:15,349 | INFO     | exitmsg: OK
[2025-11-21 05:58:06] 2025-11-21 10:57:15,350 | INFO     | cpuconsumptiontime: 225842 s
[2025-11-21 05:58:06] 2025-11-21 10:57:15,350 | INFO     | nevents: 1000
[2025-11-21 05:58:06] 2025-11-21 10:57:15,350 | INFO     | neventsw: 0
[2025-11-21 05:58:06] 2025-11-21 10:57:15,350 | INFO     | pid: 229069
[2025-11-21 05:58:06] 2025-11-21 10:57:15,350 | INFO     | pgrp: 229069
[2025-11-21 05:58:06] 2025-11-21 10:57:15,350 | INFO     | corecount: 8
[2025-11-21 05:58:06] 2025-11-21 10:57:15,350 | INFO     | event service: False
[2025-11-21 05:58:06] 2025-11-21 10:57:15,350 | INFO     | sizes: {0: 2298807, 1: 2298807, 12: 2298835, 22: 2298863, 26: 2299153, 33: 2299181, 39373: 2342584, 39374: 2342583, 39377: 2351633, 39380: 2351689, 39383: 2351999}
[2025-11-21 05:58:06] 2025-11-21 10:57:15,351 | INFO     | --------------------------------------------------
[2025-11-21 05:58:06] 2025-11-21 10:57:15,351 | INFO     | 
[2025-11-21 05:58:06] 2025-11-21 10:57:15,351 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-11-21 05:58:06] 2025-11-21 10:57:15,367 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 05:58:06] 2025-11-21 10:57:15,368 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 05:58:06] 2025-11-21 10:57:15,368 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 05:58:06] 2025-11-21 10:57:15,368 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 05:58:06] 2025-11-21 10:57:15,368 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 05:58:06] 2025-11-21 10:57:15,368 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 05:58:06] 2025-11-21 10:57:15,368 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 05:58:06] 2025-11-21 10:57:15,368 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 05:58:06] 2025-11-21 10:57:15,368 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 05:58:06] 2025-11-21 10:57:15,368 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 05:58:06] 2025-11-21 10:57:15,368 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 05:58:06] 2025-11-21 10:57:15,368 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 05:58:06] 2025-11-21 10:57:15,368 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 05:58:06] 2025-11-21 10:57:15,368 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 05:58:06] 2025-11-21 10:57:15,369 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 05:58:06] 2025-11-21 10:57:15,369 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 05:58:06] 2025-11-21 10:57:15,369 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 05:58:06] 2025-11-21 10:57:15,369 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 05:58:06] 2025-11-21 10:57:15,369 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 05:58:06] 2025-11-21 10:57:15,369 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 05:58:06] 2025-11-21 10:57:15,369 | INFO     | job 6893849968 has completed (purged errors)
[2025-11-21 05:58:06] 2025-11-21 10:57:15,369 | INFO     | overall cleanup function is called
[2025-11-21 05:58:06] 2025-11-21 10:57:16,382 | INFO     | --- collectZombieJob: --- 10, [229069]
[2025-11-21 05:58:06] 2025-11-21 10:57:16,382 | INFO     | zombie collector waiting for pid 229069
[2025-11-21 05:58:06] 2025-11-21 10:57:16,382 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 05:58:06] 2025-11-21 10:57:16,382 | INFO     | collected zombie processes
[2025-11-21 05:58:06] 2025-11-21 10:57:16,382 | INFO     | will attempt to kill all subprocesses of pid=229069
[2025-11-21 05:58:06] 2025-11-21 10:57:16,508 | INFO     | process IDs to be killed: [229069] (in reverse order)
[2025-11-21 05:58:06] 2025-11-21 10:57:16,572 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 05:58:06] 2025-11-21 10:57:16,573 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 05:58:06] 2025-11-21 10:57:16,582 | INFO     | did not find any defunct processes belonging to 229069
[2025-11-21 05:58:06] 2025-11-21 10:57:16,588 | INFO     | did not find any defunct processes belonging to 229069
[2025-11-21 05:58:06] 2025-11-21 10:57:16,588 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 05:58:06] 2025-11-21 10:57:16,589 | INFO     | ready for new job
[2025-11-21 05:58:06] 2025-11-21 10:57:16,589 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 05:58:06] 2025-11-21 10:57:16,591 | INFO     | ***************************************
[2025-11-21 05:58:06] 2025-11-21 10:57:16,591 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 05:58:06] 2025-11-21 10:57:16,591 | INFO     | ***************************************
[2025-11-21 05:58:06] 2025-11-21 10:57:16,591 | INFO     | 
[2025-11-21 05:58:06] 2025-11-21 10:57:16,593 | INFO     | architecture information:
[2025-11-21 05:58:06] 2025-11-21 10:57:16,593 | INFO     | executing command: cat /etc/os-release
[2025-11-21 05:58:06] 2025-11-21 10:57:16,603 | INFO     | cat /etc/os-release:
[2025-11-21 05:58:06] NAME="CentOS Linux"
[2025-11-21 05:58:06] VERSION="7 (Core)"
[2025-11-21 05:58:06] ID="centos"
[2025-11-21 05:58:06] ID_LIKE="rhel fedora"
[2025-11-21 05:58:06] VERSION_ID="7"
[2025-11-21 05:58:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 05:58:06] ANSI_COLOR="0;31"
[2025-11-21 05:58:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 05:58:06] HOME_URL="https://www.centos.org/"
[2025-11-21 05:58:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 05:58:06] 
[2025-11-21 05:58:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 05:58:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 05:58:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 05:58:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 05:58:06] 
[2025-11-21 05:58:06] 2025-11-21 10:57:16,603 | INFO     | ***************************************
[2025-11-21 05:58:06] 2025-11-21 10:57:17,106 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-11-21 05:58:06] 2025-11-21 10:57:17,118 | INFO     | sufficient remaining disk space (68877811712 B)
[2025-11-21 05:58:06] 2025-11-21 10:57:17,119 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 05:58:06] 2025-11-21 10:57:17,119 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 05:58:06] 2025-11-21 10:57:17,119 | INFO     | update_server=False
[2025-11-21 05:58:06] 2025-11-21 10:57:17,119 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 05:58:06] 2025-11-21 10:57:17,119 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 05:58:06] 2025-11-21 10:57:17,119 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 05:58:06] 2025-11-21 10:57:17,376 | INFO     | all payload control threads have been joined
[2025-11-21 05:58:06] 2025-11-21 10:57:17,630 | INFO     | all data control threads have been joined
[2025-11-21 05:58:06] 2025-11-21 10:57:17,705 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 05:58:06] 2025-11-21 10:57:17,856 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 05:58:06] 2025-11-21 10:57:17,856 | INFO     | aborting loop
[2025-11-21 05:58:06] 2025-11-21 10:57:18,124 | INFO     | [job] retrieve thread has finished
[2025-11-21 05:58:06] 2025-11-21 10:57:18,124 | INFO     | [job] queue monitor thread has finished
[2025-11-21 05:58:06] 2025-11-21 10:57:18,150 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 05:58:06] 2025-11-21 10:57:18,192 | INFO     | [job] validate thread has finished
[2025-11-21 05:58:06] 2025-11-21 10:57:18,328 | INFO     | all job control threads have been joined
[2025-11-21 05:58:06] 2025-11-21 10:57:18,377 | INFO     | [payload] control thread has finished
[2025-11-21 05:58:06] 2025-11-21 10:57:18,636 | INFO     | [data] control thread has finished
[2025-11-21 05:58:06] 2025-11-21 10:57:18,861 | INFO     | [job] job monitor thread has finished
[2025-11-21 05:58:06] 2025-11-21 10:57:18,958 | INFO     | [data] copytool_in thread has finished
[2025-11-21 05:58:06] 2025-11-21 10:57:19,037 | INFO     | [payload] failed_post thread has finished
[2025-11-21 05:58:06] 2025-11-21 10:57:19,115 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 05:58:06] 2025-11-21 10:57:19,119 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 05:58:06] 2025-11-21 10:57:19,125 | INFO     | [data] copytool_out thread has finished
[2025-11-21 05:58:06] 2025-11-21 10:57:19,333 | INFO     | [job] control thread has finished
[2025-11-21 05:58:06] 2025-11-21 10:57:19,436 | INFO     | [payload] validate_post thread has finished
[2025-11-21 05:58:06] 2025-11-21 10:57:19,597 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 05:58:06] 2025-11-21 10:57:21,710 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 05:58:06] 2025-11-21 10:57:47,431 | INFO     | PID=220241 has CPU usage=5.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-21 05:58:06] 2025-11-21 10:57:47,431 | INFO     | .. there are 6 such processes running
[2025-11-21 05:58:06] 2025-11-21 10:57:47,432 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 05:58:06] 2025-11-21 10:57:47,432 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 05:58:06] 2025-11-21 10:57:47,432 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 05:58:06] 2025-11-21 10:57:59,081 | INFO     | [monitor] cgroup control has ended
[2025-11-21 05:58:06] 2025-11-21 10:58:01,132 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140428071049024)>', '<ExcThread(monitor, started 140427437008640)>']
[2025-11-21 05:58:06] 2025-11-21 10:58:01,499 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 05:58:06] 2025-11-21 10:58:01,499 | INFO     | [monitor] control thread has ended
[2025-11-21 05:58:06] 2025-11-21 10:58:06,157 | INFO     | all workflow threads have been joined
[2025-11-21 05:58:06] 2025-11-21 10:58:06,157 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 05:58:06] 2025-11-21 10:58:06,158 | INFO     | traces error code: 0
[2025-11-21 05:58:06] 2025-11-21 10:58:06,158 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 05:58:06] 2025-11-21 10:58:06,248 [wrapper] ==== pilot stdout END ====
[2025-11-21 05:58:06] 2025-11-21 10:58:06,250 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 05:58:06] 2025-11-21 10:58:06,253 [wrapper] pilotpid: 220241
[2025-11-21 05:58:06] 2025-11-21 10:58:06,255 [wrapper] Pilot exit status: 0
[2025-11-21 05:58:06] 2025-11-21 10:58:06,263 [wrapper] pandaids: 6893849968
[2025-11-21 05:58:06] 2025-11-21 10:58:06,309 [wrapper] cleanup supervisor_pilot 1242138 220242
[2025-11-21 05:58:06] 2025-11-21 10:58:06,313 [wrapper] Test setup, not cleaning
[2025-11-21 05:58:06] 2025-11-21 10:58:06,315 [wrapper] apfmon messages muted
[2025-11-21 05:58:06] 2025-11-21 10:58:06,318 [wrapper] ==== wrapper stdout END ====
[2025-11-21 05:58:06] 2025-11-21 10:58:06,320 [wrapper] ==== wrapper stderr END ====
[2025-11-21 05:58:06]  *** Error codes and diagnostics ***
[2025-11-21 05:58:06]     "exeErrorCode": 0,
[2025-11-21 05:58:06]     "exeErrorDiag": "",
[2025-11-21 05:58:06]     "pilotErrorCode": 0,
[2025-11-21 05:58:06]     "pilotErrorDiag": "",
[2025-11-21 05:58:06]  *** Listing of results directory ***
[2025-11-21 05:58:06] total 1321472
[2025-11-21 05:58:06] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 06:00 pilot3.tar.gz
[2025-11-21 05:58:06] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 06:05 queuedata.json
[2025-11-21 05:58:06] -rwx------. 1 boincer umatlas     36292 Nov 20 06:06 runpilot2-wrapper.sh
[2025-11-21 05:58:06] -rw-r--r--. 1 boincer umatlas       100 Nov 20 18:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 05:58:06] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 20 18:58 run_atlas
[2025-11-21 05:58:06] -rw-r--r--. 1 boincer umatlas       105 Nov 20 18:58 job.xml
[2025-11-21 05:58:06] -rw-r--r--. 2 boincer umatlas 410840232 Nov 20 18:58 EVNT.47493127._000312.pool.root.1
[2025-11-21 05:58:06] -rw-r--r--. 2 boincer umatlas     15847 Nov 20 18:58 start_atlas.sh
[2025-11-21 05:58:06] drwxrwx--x. 2 boincer umatlas      4096 Nov 20 18:58 shared
[2025-11-21 05:58:06] -rw-r--r--. 2 boincer umatlas    590104 Nov 20 18:58 input.tar.gz
[2025-11-21 05:58:06] -rw-r--r--. 1 boincer umatlas         0 Nov 20 18:58 boinc_lockfile
[2025-11-21 05:58:06] -rw-r--r--. 1 boincer umatlas      2786 Nov 20 18:58 pandaJob.out
[2025-11-21 05:58:06] -rw-------. 1 boincer umatlas        57 Nov 20 18:58 setup.sh.local
[2025-11-21 05:58:06] -rw-------. 1 boincer umatlas    989817 Nov 20 18:59 agis_schedconf.cvmfs.json
[2025-11-21 05:58:06] drwx------. 5 boincer umatlas      4096 Nov 20 18:59 pilot3
[2025-11-21 05:58:06] -rw-r--r--. 1 boincer umatlas       533 Nov 21 05:48 boinc_task_state.xml
[2025-11-21 05:58:06] -rw-r--r--. 1 boincer umatlas      6846 Nov 21 05:56 init_data.xml
[2025-11-21 05:58:06] -rw-------. 1 boincer umatlas 923796193 Nov 21 05:56 HITS.47523449._003114.pool.root.1
[2025-11-21 05:58:06] -rw-------. 1 boincer umatlas      1052 Nov 21 05:57 memory_monitor_summary.json
[2025-11-21 05:58:06] -rw-------. 1 boincer umatlas   1526164 Nov 21 05:57 agis_ddmendpoints.agis.ALL.json
[2025-11-21 05:58:06] -rw-------. 1 boincer umatlas   1899268 Nov 21 05:57 log.47523449._003114.job.log.tgz.1
[2025-11-21 05:58:06] -rw-------. 1 boincer umatlas      8616 Nov 21 05:57 heartbeat.json
[2025-11-21 05:58:06] -rw-------. 1 boincer umatlas        95 Nov 21 05:57 pilot_heartbeat.json
[2025-11-21 05:58:06] -rw-r--r--. 1 boincer umatlas      8192 Nov 21 05:58 boinc_mmap_file
[2025-11-21 05:58:06] -rw-r--r--. 1 boincer umatlas        29 Nov 21 05:58 wrapper_checkpoint.txt
[2025-11-21 05:58:06] -rw-------. 1 boincer umatlas      4822 Nov 21 05:58 pilotlog.txt
[2025-11-21 05:58:06] -rw-------. 1 boincer umatlas   5416827 Nov 21 05:58 log.47523449._003114.job.log.1
[2025-11-21 05:58:06] -rw-------. 1 boincer umatlas       353 Nov 21 05:58 output.list
[2025-11-21 05:58:06] -rw-r--r--. 1 boincer umatlas       620 Nov 21 05:58 runtime_log
[2025-11-21 05:58:06] -rw-------. 1 boincer umatlas   7331840 Nov 21 05:58 result.tar.gz
[2025-11-21 05:58:06] -rw-r--r--. 1 boincer umatlas      9353 Nov 21 05:58 runtime_log.err
[2025-11-21 05:58:06] -rw-------. 1 boincer umatlas       662 Nov 21 05:58 n9dKDmZfHg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmlaHKDmd0sOYo.diag
[2025-11-21 05:58:06] -rw-r--r--. 1 boincer umatlas     21363 Nov 21 05:58 stderr.txt
[2025-11-21 05:58:06] HITS file was successfully produced:
[2025-11-21 05:58:06] -rw-------. 1 boincer umatlas 923796193 Nov 21 05:56 shared/HITS.pool.root.1
[2025-11-21 05:58:06]  *** Contents of shared directory: ***
[2025-11-21 05:58:06] total 1311120
[2025-11-21 05:58:06] -rw-r--r--. 2 boincer umatlas 410840232 Nov 20 18:58 ATLAS.root_0
[2025-11-21 05:58:06] -rw-r--r--. 2 boincer umatlas     15847 Nov 20 18:58 start_atlas.sh
[2025-11-21 05:58:06] -rw-r--r--. 2 boincer umatlas    590104 Nov 20 18:58 input.tar.gz
[2025-11-21 05:58:06] -rw-------. 1 boincer umatlas 923796193 Nov 21 05:56 HITS.pool.root.1
[2025-11-21 05:58:06] -rw-------. 1 boincer umatlas   7331840 Nov 21 05:58 result.tar.gz
05:58:07 (216380): run_atlas exited; CPU time 226345.405234
05:58:07 (216380): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN