Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
08:19:51 (1199047): wrapper (7.7.26015): starting
08:19:51 (1199047): wrapper: running run_atlas (--nthreads 2)
[2025-11-25 08:19:51] Arguments: --nthreads 2
[2025-11-25 08:19:51] Threads: 2
[2025-11-25 08:19:51] Checking for CVMFS
[2025-11-25 08:19:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-25 08:19:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-25 08:19:51] Running cvmfs_config stat atlas.cern.ch
[2025-11-25 08:19:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-25 08:19:52] 2.9.2.0 87922 9544 59532 153275 2 80 30147414 36864000 0 130560 0 3063211 99.823 604879 8461 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-25 08:19:52] CVMFS is ok
[2025-11-25 08:19:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 08:19:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 08:19:52] Further information can be found at the LHC@home message board.
[2025-11-25 08:19:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 08:19:52] Checking for apptainer binary...
[2025-11-25 08:19:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-25 08:19:52] Running /usr/bin/apptainer --version
[2025-11-25 08:19:52] apptainer version 1.4.1-1.1
[2025-11-25 08:19:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 08:19:52] thA354
[2025-11-25 08:19:52] apptainer works
[2025-11-25 08:19:52] Set ATHENA_PROC_NUMBER=2
[2025-11-25 08:19:52] Set ATHENA_CORE_NUMBER=2
[2025-11-25 08:19:52] Starting ATLAS job with PandaID=6893861635
[2025-11-25 08:19:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 20:34:24]  *** The last 200 lines of the pilot log: ***
[2025-11-25 20:34:24] 2025-11-25 19:33:48,388 | INFO     | time since job start (44023s) is within the limit (172800.0s)
[2025-11-25 20:34:24] 2025-11-25 19:33:49,316 | INFO     | monitor loop #3360: job 0:6893861635 is in state 'finished'
[2025-11-25 20:34:24] 2025-11-25 19:33:49,317 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 20:34:24] 2025-11-25 19:33:50,393 | INFO     | time since job start (44025s) is within the limit (172800.0s)
[2025-11-25 20:34:24] 2025-11-25 19:33:51,344 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 20:34:24] 2025-11-25 19:33:51,344 | INFO     | found 8 cores (8 cores per socket, 1 socket) , CPU MHz: 3943.0285000000003
[2025-11-25 20:34:24] 2025-11-25 19:33:51,345 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6893861635/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 20:34:24] 2025-11-25 19:33:51,345 | INFO     | extracted standard info from prmon json
[2025-11-25 20:34:24] 2025-11-25 19:33:51,345 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 20:34:24] 2025-11-25 19:33:51,345 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 20:34:24] 2025-11-25 19:33:51,350 | INFO     | fitting pss+swap vs Time
[2025-11-25 20:34:24] 2025-11-25 19:33:51,350 | INFO     | sum of square deviations: 116704924920.5
[2025-11-25 20:34:24] 2025-11-25 19:33:51,354 | INFO     | sum of deviations: 206789840301.99997
[2025-11-25 20:34:24] 2025-11-25 19:33:51,354 | INFO     | mean x: 1764077223.5
[2025-11-25 20:34:24] 2025-11-25 19:33:51,354 | INFO     | mean y: 2029360.2493074792
[2025-11-25 20:34:24] 2025-11-25 19:33:51,354 | INFO     | intersect: -3123744874.0125246
[2025-11-25 20:34:24] 2025-11-25 19:33:51,354 | INFO     | chi2: 3.9307724556955224
[2025-11-25 20:34:24] 2025-11-25 19:33:51,355 | INFO     | sum of square deviations: 114297056518.0
[2025-11-25 20:34:24] 2025-11-25 19:33:51,359 | INFO     | sum of deviations: 304622364311.00006
[2025-11-25 20:34:24] 2025-11-25 19:33:51,359 | INFO     | mean x: 1764077071.0
[2025-11-25 20:34:24] 2025-11-25 19:33:51,359 | INFO     | mean y: 2035538.6066945607
[2025-11-25 20:34:24] 2025-11-25 19:33:51,359 | INFO     | intersect: -4699549476.491358
[2025-11-25 20:34:24] 2025-11-25 19:33:51,359 | INFO     | chi2: 2.3484586160580094
[2025-11-25 20:34:24] 2025-11-25 19:33:51,360 | INFO     | current chi2=2.3484586160580094 (change=40.254526495035535 %)
[2025-11-25 20:34:24] 2025-11-25 19:33:51,360 | INFO     | sum of square deviations: 111922537578.0
[2025-11-25 20:34:24] 2025-11-25 19:33:51,364 | INFO     | sum of deviations: 301971562829.0001
[2025-11-25 20:34:24] 2025-11-25 19:33:51,364 | INFO     | mean x: 1764076918.5
[2025-11-25 20:34:24] 2025-11-25 19:33:51,364 | INFO     | mean y: 2035368.3623595505
[2025-11-25 20:34:24] 2025-11-25 19:33:51,364 | INFO     | intersect: -4757515974.536444
[2025-11-25 20:34:24] 2025-11-25 19:33:51,364 | INFO     | chi2: 2.348058624630203
[2025-11-25 20:34:24] 2025-11-25 19:33:51,364 | INFO     | current chi2=2.348058624630203 (change=0.017032083302269872 %)
[2025-11-25 20:34:24] 2025-11-25 19:33:51,364 | INFO     | right removable region: 711
[2025-11-25 20:34:24] 2025-11-25 19:33:51,365 | INFO     | sum of square deviations: 114297056518.0
[2025-11-25 20:34:24] 2025-11-25 19:33:51,369 | INFO     | sum of deviations: 72109333908.00003
[2025-11-25 20:34:24] 2025-11-25 19:33:51,369 | INFO     | mean x: 1764077376.0
[2025-11-25 20:34:24] 2025-11-25 19:33:51,369 | INFO     | mean y: 2037881.4016736401
[2025-11-25 20:34:24] 2025-11-25 19:33:51,369 | INFO     | intersect: -1110908054.5726225
[2025-11-25 20:34:24] 2025-11-25 19:33:51,369 | INFO     | chi2: 1.923281508747856
[2025-11-25 20:34:24] 2025-11-25 19:33:51,369 | INFO     | current chi2=1.923281508747856 (change=51.07115635856503 %)
[2025-11-25 20:34:24] 2025-11-25 19:33:51,369 | INFO     | sum of square deviations: 111922537578.0
[2025-11-25 20:34:24] 2025-11-25 19:33:51,373 | INFO     | sum of deviations: 34958457212.500015
[2025-11-25 20:34:24] 2025-11-25 19:33:51,374 | INFO     | mean x: 1764077528.5
[2025-11-25 20:34:24] 2025-11-25 19:33:51,374 | INFO     | mean y: 2040259.1053370787
[2025-11-25 20:34:24] 2025-11-25 19:33:51,374 | INFO     | intersect: -548960729.0256009
[2025-11-25 20:34:24] 2025-11-25 19:33:51,374 | INFO     | chi2: 1.6619832628075082
[2025-11-25 20:34:24] 2025-11-25 19:33:51,374 | INFO     | current chi2=1.6619832628075082 (change=13.586063441667722 %)
[2025-11-25 20:34:24] 2025-11-25 19:33:51,374 | INFO     | left removable region: 20
[2025-11-25 20:34:24] 2025-11-25 19:33:51,374 | INFO     | sum of square deviations: 102308485690.0
[2025-11-25 20:34:24] 2025-11-25 19:33:51,378 | INFO     | sum of deviations: 118934280117.00002
[2025-11-25 20:34:24] 2025-11-25 19:33:51,378 | INFO     | mean x: 1764077498.0
[2025-11-25 20:34:24] 2025-11-25 19:33:51,378 | INFO     | mean y: 2047296.3068017366
[2025-11-25 20:34:24] 2025-11-25 19:33:51,378 | INFO     | intersect: -2048704270.1953309
[2025-11-25 20:34:24] 2025-11-25 19:33:51,378 | INFO     | chi2: 0.06457649715930236
[2025-11-25 20:34:24] 2025-11-25 19:33:51,378 | INFO     | current memory leak: 1.16 B/s (using 691 data points, chi2=0.06)
[2025-11-25 20:34:24] 2025-11-25 19:33:51,379 | INFO     | could have reported an average CPU frequency of 4571 MHz (28 samples)
[2025-11-25 20:34:24] 2025-11-25 19:33:51,379 | INFO     | ..............................
[2025-11-25 20:34:24] 2025-11-25 19:33:51,379 | INFO     | . Timing measurements:
[2025-11-25 20:34:24] 2025-11-25 19:33:51,379 | INFO     | . get job = 0 s
[2025-11-25 20:34:24] 2025-11-25 19:33:51,379 | INFO     | . initial setup = 1 s
[2025-11-25 20:34:24] 2025-11-25 19:33:51,379 | INFO     | . payload setup = 7 s
[2025-11-25 20:34:24] 2025-11-25 19:33:51,379 | INFO     | . stage-in = 0 s
[2025-11-25 20:34:24] 2025-11-25 19:33:51,379 | INFO     | . payload execution = 43986 s
[2025-11-25 20:34:24] 2025-11-25 19:33:51,379 | INFO     | . stage-out = 1 s
[2025-11-25 20:34:24] 2025-11-25 19:33:51,379 | INFO     | . log creation = 0 s
[2025-11-25 20:34:24] 2025-11-25 19:33:51,379 | INFO     | ..............................
[2025-11-25 20:34:24] 2025-11-25 19:33:51,407 | INFO     | 
[2025-11-25 20:34:24] 2025-11-25 19:33:51,407 | INFO     | job summary report
[2025-11-25 20:34:24] 2025-11-25 19:33:51,407 | INFO     | --------------------------------------------------
[2025-11-25 20:34:24] 2025-11-25 19:33:51,407 | INFO     | PanDA job id: 6893861635
[2025-11-25 20:34:24] 2025-11-25 19:33:51,407 | INFO     | task id: 47523449
[2025-11-25 20:34:24] 2025-11-25 19:33:51,407 | INFO     | errors: (none)
[2025-11-25 20:34:24] 2025-11-25 19:33:51,407 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 20:34:24] 2025-11-25 19:33:51,407 | INFO     | pilot state: finished 
[2025-11-25 20:34:24] 2025-11-25 19:33:51,407 | INFO     | transexitcode: 0
[2025-11-25 20:34:24] 2025-11-25 19:33:51,407 | INFO     | exeerrorcode: 0
[2025-11-25 20:34:24] 2025-11-25 19:33:51,407 | INFO     | exeerrordiag: 
[2025-11-25 20:34:24] 2025-11-25 19:33:51,407 | INFO     | exitcode: 0
[2025-11-25 20:34:24] 2025-11-25 19:33:51,407 | INFO     | exitmsg: OK
[2025-11-25 20:34:24] 2025-11-25 19:33:51,407 | INFO     | cpuconsumptiontime: 87137 s
[2025-11-25 20:34:24] 2025-11-25 19:33:51,407 | INFO     | nevents: 1000
[2025-11-25 20:34:24] 2025-11-25 19:33:51,407 | INFO     | neventsw: 0
[2025-11-25 20:34:24] 2025-11-25 19:33:51,407 | INFO     | pid: 1209182
[2025-11-25 20:34:24] 2025-11-25 19:33:51,407 | INFO     | pgrp: 1209182
[2025-11-25 20:34:24] 2025-11-25 19:33:51,407 | INFO     | corecount: 2
[2025-11-25 20:34:24] 2025-11-25 19:33:51,407 | INFO     | event service: False
[2025-11-25 20:34:24] 2025-11-25 19:33:51,407 | INFO     | sizes: {0: 2284313, 7: 2284575, 11: 2284603, 43997: 2330680, 43998: 2339685, 43999: 2339741, 44009: 2340115}
[2025-11-25 20:34:24] 2025-11-25 19:33:51,407 | INFO     | --------------------------------------------------
[2025-11-25 20:34:24] 2025-11-25 19:33:51,407 | INFO     | 
[2025-11-25 20:34:24] 2025-11-25 19:33:51,407 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-11-25 20:34:24] 2025-11-25 19:33:51,417 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 20:34:24] 2025-11-25 19:33:51,418 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 20:34:24] 2025-11-25 19:33:51,418 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 20:34:24] 2025-11-25 19:33:51,418 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 20:34:24] 2025-11-25 19:33:51,418 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 20:34:24] 2025-11-25 19:33:51,418 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 20:34:24] 2025-11-25 19:33:51,418 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 20:34:24] 2025-11-25 19:33:51,418 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 20:34:24] 2025-11-25 19:33:51,418 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 20:34:24] 2025-11-25 19:33:51,418 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 20:34:24] 2025-11-25 19:33:51,418 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 20:34:24] 2025-11-25 19:33:51,418 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 20:34:24] 2025-11-25 19:33:51,418 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 20:34:24] 2025-11-25 19:33:51,418 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 20:34:24] 2025-11-25 19:33:51,418 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 20:34:24] 2025-11-25 19:33:51,418 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 20:34:24] 2025-11-25 19:33:51,418 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 20:34:24] 2025-11-25 19:33:51,418 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 20:34:24] 2025-11-25 19:33:51,418 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 20:34:24] 2025-11-25 19:33:51,418 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 20:34:24] 2025-11-25 19:33:51,418 | INFO     | job 6893861635 has completed (purged errors)
[2025-11-25 20:34:24] 2025-11-25 19:33:51,418 | INFO     | overall cleanup function is called
[2025-11-25 20:34:24] 2025-11-25 19:33:52,426 | INFO     | --- collectZombieJob: --- 10, [1209182]
[2025-11-25 20:34:24] 2025-11-25 19:33:52,426 | INFO     | zombie collector waiting for pid 1209182
[2025-11-25 20:34:24] 2025-11-25 19:33:52,426 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 20:34:24] 2025-11-25 19:33:52,426 | INFO     | collected zombie processes
[2025-11-25 20:34:24] 2025-11-25 19:33:52,427 | INFO     | will attempt to kill all subprocesses of pid=1209182
[2025-11-25 20:34:24] 2025-11-25 19:33:52,458 | INFO     | process IDs to be killed: [1209182] (in reverse order)
[2025-11-25 20:34:24] 2025-11-25 19:33:52,477 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 20:34:24] 2025-11-25 19:33:52,478 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 20:34:24] 2025-11-25 19:33:52,478 | INFO     | did not find any defunct processes belonging to 1209182
[2025-11-25 20:34:24] 2025-11-25 19:33:52,479 | INFO     | did not find any defunct processes belonging to 1209182
[2025-11-25 20:34:24] 2025-11-25 19:33:52,480 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 20:34:24] 2025-11-25 19:33:52,480 | INFO     | ready for new job
[2025-11-25 20:34:24] 2025-11-25 19:33:52,480 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 20:34:24] 2025-11-25 19:33:52,481 | INFO     | ***************************************
[2025-11-25 20:34:24] 2025-11-25 19:33:52,481 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 20:34:24] 2025-11-25 19:33:52,481 | INFO     | ***************************************
[2025-11-25 20:34:24] 2025-11-25 19:33:52,481 | INFO     | 
[2025-11-25 20:34:24] 2025-11-25 19:33:52,481 | INFO     | architecture information:
[2025-11-25 20:34:24] 2025-11-25 19:33:52,481 | INFO     | executing command: cat /etc/os-release
[2025-11-25 20:34:24] 2025-11-25 19:33:52,489 | INFO     | cat /etc/os-release:
[2025-11-25 20:34:24] NAME="CentOS Linux"
[2025-11-25 20:34:24] VERSION="7 (Core)"
[2025-11-25 20:34:24] ID="centos"
[2025-11-25 20:34:24] ID_LIKE="rhel fedora"
[2025-11-25 20:34:24] VERSION_ID="7"
[2025-11-25 20:34:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 20:34:24] ANSI_COLOR="0;31"
[2025-11-25 20:34:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 20:34:24] HOME_URL="https://www.centos.org/"
[2025-11-25 20:34:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 20:34:24] 
[2025-11-25 20:34:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 20:34:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 20:34:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 20:34:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 20:34:24] 
[2025-11-25 20:34:24] 2025-11-25 19:33:52,489 | INFO     | ***************************************
[2025-11-25 20:34:24] 2025-11-25 19:33:52,992 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-25 20:34:24] 2025-11-25 19:33:53,003 | INFO     | sufficient remaining disk space (490042556416 B)
[2025-11-25 20:34:24] 2025-11-25 19:33:53,003 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 20:34:24] 2025-11-25 19:33:53,004 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 20:34:24] 2025-11-25 19:33:53,004 | INFO     | update_server=False
[2025-11-25 20:34:24] 2025-11-25 19:33:53,004 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 20:34:24] 2025-11-25 19:33:53,004 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 20:34:24] 2025-11-25 19:33:53,004 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 20:34:24] 2025-11-25 19:33:53,004 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 20:34:24] 2025-11-25 19:33:53,004 | INFO     | aborting loop
[2025-11-25 20:34:24] 2025-11-25 19:33:53,701 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 20:34:24] 2025-11-25 19:33:53,816 | INFO     | all data control threads have been joined
[2025-11-25 20:34:24] 2025-11-25 19:33:54,009 | INFO     | [job] queue monitor thread has finished
[2025-11-25 20:34:24] 2025-11-25 19:33:54,010 | INFO     | [job] retrieve thread has finished
[2025-11-25 20:34:24] 2025-11-25 19:33:54,011 | INFO     | [job] job monitor thread has finished
[2025-11-25 20:34:24] 2025-11-25 19:33:54,070 | INFO     | [payload] failed_post thread has finished
[2025-11-25 20:34:24] 2025-11-25 19:33:54,111 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 20:34:24] 2025-11-25 19:33:54,277 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 20:34:24] 2025-11-25 19:33:54,338 | INFO     | [job] validate thread has finished
[2025-11-25 20:34:24] 2025-11-25 19:33:54,377 | INFO     | all payload control threads have been joined
[2025-11-25 20:34:24] 2025-11-25 19:33:54,541 | INFO     | all job control threads have been joined
[2025-11-25 20:34:24] 2025-11-25 19:33:54,588 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 20:34:24] 2025-11-25 19:33:54,716 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 20:34:24] 2025-11-25 19:33:54,820 | INFO     | [data] control thread has finished
[2025-11-25 20:34:24] 2025-11-25 19:33:55,040 | INFO     | [payload] validate_post thread has finished
[2025-11-25 20:34:24] 2025-11-25 19:33:55,383 | INFO     | [payload] control thread has finished
[2025-11-25 20:34:24] 2025-11-25 19:33:55,458 | INFO     | [data] copytool_in thread has finished
[2025-11-25 20:34:24] 2025-11-25 19:33:55,547 | INFO     | [job] control thread has finished
[2025-11-25 20:34:24] 2025-11-25 19:33:55,707 | INFO     | [data] copytool_out thread has finished
[2025-11-25 20:34:24] 2025-11-25 19:33:57,011 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 20:34:24] 2025-11-25 19:34:07,482 | INFO     | [monitor] cgroup control has ended
[2025-11-25 20:34:24] 2025-11-25 19:34:08,388 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139954769225536)>', '<ExcThread(monitor, started 139954059474688)>']
[2025-11-25 20:34:24] 2025-11-25 19:34:13,414 | INFO     | all workflow threads have been joined
[2025-11-25 20:34:24] 2025-11-25 19:34:13,414 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 20:34:24] 2025-11-25 19:34:13,415 | INFO     | traces error code: 0
[2025-11-25 20:34:24] 2025-11-25 19:34:13,415 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 20:34:24] 2025-11-25 19:34:23,509 | INFO     | PID=1202758 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 20:34:24] 2025-11-25 19:34:23,509 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 20:34:24] 2025-11-25 19:34:23,509 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 20:34:24] 2025-11-25 19:34:23,509 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 20:34:24] 2025-11-25 19:34:23,509 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 20:34:24] 2025-11-25 19:34:23,509 | INFO     | [monitor] control thread has ended
[2025-11-25 20:34:24] 2025-11-25 19:34:23,548 [wrapper] ==== pilot stdout END ====
[2025-11-25 20:34:24] 2025-11-25 19:34:23,550 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 20:34:24] 2025-11-25 19:34:23,552 [wrapper] pilotpid: 1202758
[2025-11-25 20:34:24] 2025-11-25 19:34:23,554 [wrapper] Pilot exit status: 0
[2025-11-25 20:34:24] 2025-11-25 19:34:23,560 [wrapper] pandaids: 6893861635
[2025-11-25 20:34:24] 2025-11-25 19:34:23,570 [wrapper] cleanup supervisor_pilot 1281384 1202759
[2025-11-25 20:34:24] 2025-11-25 19:34:23,572 [wrapper] Test setup, not cleaning
[2025-11-25 20:34:24] 2025-11-25 19:34:23,574 [wrapper] apfmon messages muted
[2025-11-25 20:34:24] 2025-11-25 19:34:23,576 [wrapper] ==== wrapper stdout END ====
[2025-11-25 20:34:24] 2025-11-25 19:34:23,578 [wrapper] ==== wrapper stderr END ====
[2025-11-25 20:34:24]  *** Error codes and diagnostics ***
[2025-11-25 20:34:24]     "exeErrorCode": 0,
[2025-11-25 20:34:24]     "exeErrorDiag": "",
[2025-11-25 20:34:24]     "pilotErrorCode": 0,
[2025-11-25 20:34:24]     "pilotErrorDiag": "",
[2025-11-25 20:34:24]  *** Listing of results directory ***
[2025-11-25 20:34:24] total 1305016
[2025-11-25 20:34:24] -rw-r--r-- 1 boinc boinc    576529 Nov 20 14:50 pilot3.tar.gz
[2025-11-25 20:34:24] -rwx------ 1 boinc boinc     36292 Nov 20 15:02 runpilot2-wrapper.sh
[2025-11-25 20:34:24] -rw-r--r-- 1 boinc boinc      5112 Nov 20 15:02 queuedata.json
[2025-11-25 20:34:24] -rw-r--r-- 1 boinc boinc       100 Nov 25 08:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 20:34:24] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 08:19 run_atlas
[2025-11-25 20:34:24] -rw-r--r-- 1 boinc boinc       105 Nov 25 08:19 job.xml
[2025-11-25 20:34:24] -rw-r--r-- 2 boinc boinc 406024789 Nov 25 08:19 EVNT.47493127._000580.pool.root.1
[2025-11-25 20:34:24] -rw-r--r-- 2 boinc boinc    590097 Nov 25 08:19 input.tar.gz
[2025-11-25 20:34:24] -rw-r--r-- 2 boinc boinc     15847 Nov 25 08:19 start_atlas.sh
[2025-11-25 20:34:24] drwxrwx--x 2 boinc boinc      4096 Nov 25 08:19 shared
[2025-11-25 20:34:24] -rw-r--r-- 1 boinc boinc         0 Nov 25 08:19 boinc_setup_complete
[2025-11-25 20:34:24] -rw-r--r-- 1 boinc boinc      6207 Nov 25 08:19 init_data.xml
[2025-11-25 20:34:24] -rw-r--r-- 1 boinc boinc         0 Nov 25 08:19 boinc_lockfile
[2025-11-25 20:34:24] -rw-r--r-- 1 boinc boinc      2786 Nov 25 08:19 pandaJob.out
[2025-11-25 20:34:24] -rw------- 1 boinc boinc    991830 Nov 25 08:20 agis_schedconf.cvmfs.json
[2025-11-25 20:34:24] drwx------ 5 boinc boinc      4096 Nov 25 08:20 pilot3
[2025-11-25 20:34:24] -rw-r--r-- 1 boinc boinc       531 Nov 25 20:29 boinc_task_state.xml
[2025-11-25 20:34:24] -rw------- 1 boinc boinc 911620099 Nov 25 20:33 HITS.47523449._005798.pool.root.1
[2025-11-25 20:34:24] -rw------- 1 boinc boinc        95 Nov 25 20:33 pilot_heartbeat.json
[2025-11-25 20:34:24] -rw------- 1 boinc boinc      1023 Nov 25 20:33 memory_monitor_summary.json
[2025-11-25 20:34:24] -rw------- 1 boinc boinc   1516240 Nov 25 20:33 agis_ddmendpoints.agis.ALL.json
[2025-11-25 20:34:24] -rw------- 1 boinc boinc   1209616 Nov 25 20:33 log.47523449._005798.job.log.tgz.1
[2025-11-25 20:34:24] -rw------- 1 boinc boinc      8562 Nov 25 20:33 heartbeat.json
[2025-11-25 20:34:24] -rw-r--r-- 1 boinc boinc      8192 Nov 25 20:34 boinc_mmap_file
[2025-11-25 20:34:24] -rw-r--r-- 1 boinc boinc        28 Nov 25 20:34 wrapper_checkpoint.txt
[2025-11-25 20:34:24] -rw------- 1 boinc boinc       747 Nov 25 20:34 pilotlog.txt
[2025-11-25 20:34:24] -rw------- 1 boinc boinc   6178327 Nov 25 20:34 log.47523449._005798.job.log.1
[2025-11-25 20:34:24] -rw------- 1 boinc boinc       353 Nov 25 20:34 output.list
[2025-11-25 20:34:24] -rw-r--r-- 1 boinc boinc       620 Nov 25 20:34 runtime_log
[2025-11-25 20:34:24] -rw------- 1 boinc boinc   7403520 Nov 25 20:34 result.tar.gz
[2025-11-25 20:34:24] -rw-r--r-- 1 boinc boinc      8898 Nov 25 20:34 runtime_log.err
[2025-11-25 20:34:24] -rw------- 1 boinc boinc       665 Nov 25 20:34 Q2KODmVQKg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmvlGKDmKlmGPo.diag
[2025-11-25 20:34:24] -rw-r--r-- 1 boinc boinc     21278 Nov 25 20:34 stderr.txt
[2025-11-25 20:34:24] HITS file was successfully produced:
[2025-11-25 20:34:24] -rw------- 1 boinc boinc 911620099 Nov 25 20:33 shared/HITS.pool.root.1
[2025-11-25 20:34:24]  *** Contents of shared directory: ***
[2025-11-25 20:34:24] total 1294604
[2025-11-25 20:34:24] -rw-r--r-- 2 boinc boinc 406024789 Nov 25 08:19 ATLAS.root_0
[2025-11-25 20:34:24] -rw-r--r-- 2 boinc boinc    590097 Nov 25 08:19 input.tar.gz
[2025-11-25 20:34:24] -rw-r--r-- 2 boinc boinc     15847 Nov 25 08:19 start_atlas.sh
[2025-11-25 20:34:24] -rw------- 1 boinc boinc 911620099 Nov 25 20:33 HITS.pool.root.1
[2025-11-25 20:34:24] -rw------- 1 boinc boinc   7403520 Nov 25 20:34 result.tar.gz
20:34:26 (1199047): run_atlas exited; CPU time 87268.817342
20:34:26 (1199047): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN