Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:09:26 (3204449): wrapper (7.7.26015): starting
19:09:26 (3204449): wrapper: running run_atlas (--nthreads 4)
[2025-11-23 19:09:26] Arguments: --nthreads 4
[2025-11-23 19:09:26] Threads: 4
[2025-11-23 19:09:26] Checking for CVMFS
[2025-11-23 19:09:26] No cvmfs_config command found, will try listing directly
[2025-11-23 19:09:26] CVMFS is ok
[2025-11-23 19:09:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 19:09:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 19:09:26] Further information can be found at the LHC@home message board.
[2025-11-23 19:09:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 19:09:26] Checking for apptainer binary...
[2025-11-23 19:09:26] which: no apptainer in ((null))
[2025-11-23 19:09:26] apptainer is not installed, using version from CVMFS
[2025-11-23 19:09:26] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 19:09:26] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot100/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2025-11-23 19:09:26] apptainer works
[2025-11-23 19:09:26] Set ATHENA_PROC_NUMBER=4
[2025-11-23 19:09:26] Set ATHENA_CORE_NUMBER=4
[2025-11-23 19:09:26] Starting ATLAS job with PandaID=6893861637
[2025-11-23 19:09:26] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot100/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 11:17:29]  *** The last 200 lines of the pilot log: ***
[2025-11-24 11:17:29] 2025-11-24 10:16:15,444 | INFO     | monitor loop #3847: job 0:6893861637 is in state 'finished'
[2025-11-24 11:17:29] 2025-11-24 10:16:15,444 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 11:17:29] 2025-11-24 10:16:15,900 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 11:17:29] 2025-11-24 10:16:15,923 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2700.608171875002
[2025-11-24 11:17:29] 2025-11-24 10:16:15,949 | INFO     | using path: /scratch/boinc/var/slot100/slots/0/PanDA_Pilot-6893861637/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 11:17:29] 2025-11-24 10:16:15,950 | INFO     | extracted standard info from prmon json
[2025-11-24 11:17:29] 2025-11-24 10:16:15,950 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 11:17:29] 2025-11-24 10:16:15,950 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 11:17:29] 2025-11-24 10:16:15,967 | INFO     | fitting pss+swap vs Time
[2025-11-24 11:17:29] 2025-11-24 10:16:15,968 | INFO     | sum of square deviations: 265857610929.73557
[2025-11-24 11:17:29] 2025-11-24 10:16:15,973 | INFO     | time since job start (57995s) is within the limit (172800.0s)
[2025-11-24 11:17:29] 2025-11-24 10:16:15,990 | INFO     | sum of deviations: 751162711688.4591
[2025-11-24 11:17:29] 2025-11-24 10:16:15,990 | INFO     | mean x: 1763950361.5778947
[2025-11-24 11:17:29] 2025-11-24 10:16:15,990 | INFO     | mean y: 2266886.6694736844
[2025-11-24 11:17:29] 2025-11-24 10:16:15,990 | INFO     | intersect: -4981655643.338071
[2025-11-24 11:17:29] 2025-11-24 10:16:15,991 | INFO     | chi2: 4.563572329135421
[2025-11-24 11:17:29] 2025-11-24 10:16:15,992 | INFO     | sum of square deviations: 261681936602.20535
[2025-11-24 11:17:29] 2025-11-24 10:16:16,013 | INFO     | sum of deviations: 960134261619.7192
[2025-11-24 11:17:29] 2025-11-24 10:16:16,013 | INFO     | mean x: 1763950209.078307
[2025-11-24 11:17:29] 2025-11-24 10:16:16,013 | INFO     | mean y: 2274514.4497354496
[2025-11-24 11:17:29] 2025-11-24 10:16:16,014 | INFO     | intersect: -6469815433.821751
[2025-11-24 11:17:29] 2025-11-24 10:16:16,015 | INFO     | chi2: 2.113799334413587
[2025-11-24 11:17:29] 2025-11-24 10:16:16,015 | INFO     | current chi2=2.113799334413587 (change=53.681037968471266 %)
[2025-11-24 11:17:29] 2025-11-24 10:16:16,016 | INFO     | sum of square deviations: 257550216587.174
[2025-11-24 11:17:29] 2025-11-24 10:16:16,037 | INFO     | sum of deviations: 950813354983.1926
[2025-11-24 11:17:29] 2025-11-24 10:16:16,037 | INFO     | mean x: 1763950056.5787234
[2025-11-24 11:17:29] 2025-11-24 10:16:16,037 | INFO     | mean y: 2274170.409574468
[2025-11-24 11:17:29] 2025-11-24 10:16:16,037 | INFO     | intersect: -6509804497.366364
[2025-11-24 11:17:29] 2025-11-24 10:16:16,038 | INFO     | chi2: 2.1128737491764618
[2025-11-24 11:17:29] 2025-11-24 10:16:16,038 | INFO     | current chi2=2.1128737491764618 (change=0.04378775326759319 %)
[2025-11-24 11:17:29] 2025-11-24 10:16:16,039 | INFO     | right removable region: 939
[2025-11-24 11:17:29] 2025-11-24 10:16:16,040 | INFO     | sum of square deviations: 261681891462.20523
[2025-11-24 11:17:29] 2025-11-24 10:16:16,061 | INFO     | sum of deviations: 566507764368.1617
[2025-11-24 11:17:29] 2025-11-24 10:16:16,061 | INFO     | mean x: 1763950514.078307
[2025-11-24 11:17:29] 2025-11-24 10:16:16,061 | INFO     | mean y: 2273619.7005291004
[2025-11-24 11:17:29] 2025-11-24 10:16:16,061 | INFO     | intersect: -3816453219.221373
[2025-11-24 11:17:29] 2025-11-24 10:16:16,062 | INFO     | chi2: 2.577583111796586
[2025-11-24 11:17:29] 2025-11-24 10:16:16,062 | INFO     | current chi2=2.577583111796586 (change=43.518302638912814 %)
[2025-11-24 11:17:29] 2025-11-24 10:16:16,064 | INFO     | sum of square deviations: 257550126307.1741
[2025-11-24 11:17:29] 2025-11-24 10:16:16,084 | INFO     | sum of deviations: 534628255353.7701
[2025-11-24 11:17:29] 2025-11-24 10:16:16,085 | INFO     | mean x: 1763950666.5787234
[2025-11-24 11:17:29] 2025-11-24 10:16:16,085 | INFO     | mean y: 2274795.9085106384
[2025-11-24 11:17:29] 2025-11-24 10:16:16,085 | INFO     | intersect: -3659373058.530277
[2025-11-24 11:17:29] 2025-11-24 10:16:16,086 | INFO     | chi2: 2.5541170982590486
[2025-11-24 11:17:29] 2025-11-24 10:16:16,086 | INFO     | current chi2=2.5541170982590486 (change=0.9103882404467414 %)
[2025-11-24 11:17:29] 2025-11-24 10:16:16,086 | INFO     | left removable region: 20
[2025-11-24 11:17:29] 2025-11-24 10:16:16,087 | INFO     | sum of square deviations: 240671544586.04138
[2025-11-24 11:17:29] 2025-11-24 10:16:16,107 | INFO     | sum of deviations: 685108308041.4668
[2025-11-24 11:17:29] 2025-11-24 10:16:16,108 | INFO     | mean x: 1763950636.0805223
[2025-11-24 11:17:29] 2025-11-24 10:16:16,108 | INFO     | mean y: 2284016.277475517
[2025-11-24 11:17:29] 2025-11-24 10:16:16,108 | INFO     | intersect: -5019070867.335496
[2025-11-24 11:17:29] 2025-11-24 10:16:16,109 | INFO     | chi2: 0.07316312616373052
[2025-11-24 11:17:29] 2025-11-24 10:16:16,109 | INFO     | current memory leak: 2.85 B/s (using 919 data points, chi2=0.07)
[2025-11-24 11:17:29] 2025-11-24 10:16:16,111 | INFO     | could have reported an average CPU frequency of 2676 MHz (35 samples)
[2025-11-24 11:17:29] 2025-11-24 10:16:16,111 | INFO     | ..............................
[2025-11-24 11:17:29] 2025-11-24 10:16:16,111 | INFO     | . Timing measurements:
[2025-11-24 11:17:29] 2025-11-24 10:16:16,111 | INFO     | . get job = 0 s
[2025-11-24 11:17:29] 2025-11-24 10:16:16,111 | INFO     | . initial setup = 1 s
[2025-11-24 11:17:29] 2025-11-24 10:16:16,111 | INFO     | . payload setup = 9 s
[2025-11-24 11:17:29] 2025-11-24 10:16:16,111 | INFO     | . stage-in = 0 s
[2025-11-24 11:17:29] 2025-11-24 10:16:16,111 | INFO     | . payload execution = 57949 s
[2025-11-24 11:17:29] 2025-11-24 10:16:16,112 | INFO     | . stage-out = 2 s
[2025-11-24 11:17:29] 2025-11-24 10:16:16,112 | INFO     | . log creation = 0 s
[2025-11-24 11:17:29] 2025-11-24 10:16:16,112 | INFO     | ..............................
[2025-11-24 11:17:29] 2025-11-24 10:16:16,216 | INFO     | 
[2025-11-24 11:17:29] 2025-11-24 10:16:16,217 | INFO     | job summary report
[2025-11-24 11:17:29] 2025-11-24 10:16:16,217 | INFO     | --------------------------------------------------
[2025-11-24 11:17:29] 2025-11-24 10:16:16,217 | INFO     | PanDA job id: 6893861637
[2025-11-24 11:17:29] 2025-11-24 10:16:16,217 | INFO     | task id: 47523449
[2025-11-24 11:17:29] 2025-11-24 10:16:16,217 | INFO     | errors: (none)
[2025-11-24 11:17:29] 2025-11-24 10:16:16,217 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 11:17:29] 2025-11-24 10:16:16,217 | INFO     | pilot state: finished 
[2025-11-24 11:17:29] 2025-11-24 10:16:16,217 | INFO     | transexitcode: 0
[2025-11-24 11:17:29] 2025-11-24 10:16:16,218 | INFO     | exeerrorcode: 0
[2025-11-24 11:17:29] 2025-11-24 10:16:16,218 | INFO     | exeerrordiag: 
[2025-11-24 11:17:29] 2025-11-24 10:16:16,218 | INFO     | exitcode: 0
[2025-11-24 11:17:29] 2025-11-24 10:16:16,218 | INFO     | exitmsg: OK
[2025-11-24 11:17:29] 2025-11-24 10:16:16,218 | INFO     | cpuconsumptiontime: 231183 s
[2025-11-24 11:17:29] 2025-11-24 10:16:16,218 | INFO     | nevents: 1000
[2025-11-24 11:17:29] 2025-11-24 10:16:16,218 | INFO     | neventsw: 0
[2025-11-24 11:17:29] 2025-11-24 10:16:16,218 | INFO     | pid: 3218046
[2025-11-24 11:17:29] 2025-11-24 10:16:16,218 | INFO     | pgrp: 3218046
[2025-11-24 11:17:29] 2025-11-24 10:16:16,218 | INFO     | corecount: 4
[2025-11-24 11:17:29] 2025-11-24 10:16:16,218 | INFO     | event service: False
[2025-11-24 11:17:29] 2025-11-24 10:16:16,219 | INFO     | sizes: {0: 2298648, 1: 2298847, 8: 2299109, 12: 2299137, 57963: 2353341, 57966: 2362359, 57969: 2362543, 57976: 2362789}
[2025-11-24 11:17:29] 2025-11-24 10:16:16,219 | INFO     | --------------------------------------------------
[2025-11-24 11:17:29] 2025-11-24 10:16:16,219 | INFO     | 
[2025-11-24 11:17:29] 2025-11-24 10:16:16,219 | INFO     | executing command: ls -lF /scratch/boinc/var/slot100/slots/0
[2025-11-24 11:17:29] 2025-11-24 10:16:16,252 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 11:17:29] 2025-11-24 10:16:16,253 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 11:17:29] 2025-11-24 10:16:16,253 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 11:17:29] 2025-11-24 10:16:16,253 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 11:17:29] 2025-11-24 10:16:16,253 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 11:17:29] 2025-11-24 10:16:16,253 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 11:17:29] 2025-11-24 10:16:16,253 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 11:17:29] 2025-11-24 10:16:16,253 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 11:17:29] 2025-11-24 10:16:16,253 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 11:17:29] 2025-11-24 10:16:16,253 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 11:17:29] 2025-11-24 10:16:16,254 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 11:17:29] 2025-11-24 10:16:16,254 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 11:17:29] 2025-11-24 10:16:16,254 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 11:17:29] 2025-11-24 10:16:16,254 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 11:17:29] 2025-11-24 10:16:16,254 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 11:17:29] 2025-11-24 10:16:16,254 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 11:17:29] 2025-11-24 10:16:16,254 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 11:17:29] 2025-11-24 10:16:16,254 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 11:17:29] 2025-11-24 10:16:16,254 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 11:17:29] 2025-11-24 10:16:16,254 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 11:17:29] 2025-11-24 10:16:16,255 | INFO     | job 6893861637 has completed (purged errors)
[2025-11-24 11:17:29] 2025-11-24 10:16:16,255 | INFO     | overall cleanup function is called
[2025-11-24 11:17:29] 2025-11-24 10:16:17,272 | INFO     | --- collectZombieJob: --- 10, [3218046]
[2025-11-24 11:17:29] 2025-11-24 10:16:17,272 | INFO     | zombie collector waiting for pid 3218046
[2025-11-24 11:17:29] 2025-11-24 10:16:17,273 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 11:17:29] 2025-11-24 10:16:17,273 | INFO     | collected zombie processes
[2025-11-24 11:17:29] 2025-11-24 10:16:17,273 | INFO     | will attempt to kill all subprocesses of pid=3218046
[2025-11-24 11:17:29] 2025-11-24 10:16:18,095 | INFO     | process IDs to be killed: [3218046] (in reverse order)
[2025-11-24 11:17:29] 2025-11-24 10:16:18,367 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 11:17:29] 2025-11-24 10:16:18,367 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 11:17:29] 2025-11-24 10:16:18,400 | INFO     | did not find any defunct processes belonging to 3218046
[2025-11-24 11:17:29] 2025-11-24 10:16:18,428 | INFO     | did not find any defunct processes belonging to 3218046
[2025-11-24 11:17:29] 2025-11-24 10:16:18,430 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 11:17:29] 2025-11-24 10:16:18,430 | INFO     | ready for new job
[2025-11-24 11:17:29] 2025-11-24 10:16:18,430 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 11:17:29] 2025-11-24 10:16:18,438 | INFO     | ***************************************
[2025-11-24 11:17:29] 2025-11-24 10:16:18,438 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 11:17:29] 2025-11-24 10:16:18,438 | INFO     | ***************************************
[2025-11-24 11:17:29] 2025-11-24 10:16:18,438 | INFO     | 
[2025-11-24 11:17:29] 2025-11-24 10:16:18,447 | INFO     | architecture information:
[2025-11-24 11:17:29] 2025-11-24 10:16:18,447 | INFO     | executing command: cat /etc/os-release
[2025-11-24 11:17:29] 2025-11-24 10:16:18,471 | INFO     | cat /etc/os-release:
[2025-11-24 11:17:29] NAME="CentOS Linux"
[2025-11-24 11:17:29] VERSION="7 (Core)"
[2025-11-24 11:17:29] ID="centos"
[2025-11-24 11:17:29] ID_LIKE="rhel fedora"
[2025-11-24 11:17:29] VERSION_ID="7"
[2025-11-24 11:17:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 11:17:29] ANSI_COLOR="0;31"
[2025-11-24 11:17:29] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 11:17:29] HOME_URL="https://www.centos.org/"
[2025-11-24 11:17:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 11:17:29] 
[2025-11-24 11:17:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 11:17:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 11:17:29] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 11:17:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 11:17:29] 
[2025-11-24 11:17:29] 2025-11-24 10:16:18,472 | INFO     | ***************************************
[2025-11-24 11:17:29] 2025-11-24 10:16:18,974 | INFO     | executing command: df -mP /scratch/boinc/var/slot100/slots/0
[2025-11-24 11:17:29] 2025-11-24 10:16:18,998 | INFO     | sufficient remaining disk space (3286650322944 B)
[2025-11-24 11:17:29] 2025-11-24 10:16:18,998 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 11:17:29] 2025-11-24 10:16:18,999 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 11:17:29] 2025-11-24 10:16:18,999 | INFO     | update_server=False
[2025-11-24 11:17:29] 2025-11-24 10:16:18,999 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 11:17:29] 2025-11-24 10:16:18,999 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 11:17:29] 2025-11-24 10:16:18,999 | INFO     | aborting loop
[2025-11-24 11:17:29] 2025-11-24 10:16:19,060 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 11:17:29] 2025-11-24 10:16:19,236 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 11:17:29] 2025-11-24 10:16:19,245 | INFO     | all data control threads have been joined
[2025-11-24 11:17:29] 2025-11-24 10:16:20,004 | INFO     | [job] retrieve thread has finished
[2025-11-24 11:17:29] 2025-11-24 10:16:20,005 | INFO     | [job] job monitor thread has finished
[2025-11-24 11:17:29] 2025-11-24 10:16:20,083 | INFO     | [job] validate thread has finished
[2025-11-24 11:17:29] 2025-11-24 10:16:20,118 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 11:17:29] 2025-11-24 10:16:20,194 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 11:17:29] 2025-11-24 10:16:20,245 | INFO     | all payload control threads have been joined
[2025-11-24 11:17:29] 2025-11-24 10:16:20,250 | INFO     | [data] control thread has finished
[2025-11-24 11:17:29] 2025-11-24 10:16:20,413 | INFO     | all job control threads have been joined
[2025-11-24 11:17:29] 2025-11-24 10:16:20,699 | INFO     | [payload] failed_post thread has finished
[2025-11-24 11:17:29] 2025-11-24 10:16:20,712 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 11:17:29] 2025-11-24 10:16:20,986 | INFO     | [data] copytool_in thread has finished
[2025-11-24 11:17:29] 2025-11-24 10:16:20,987 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 11:17:29] 2025-11-24 10:16:21,227 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 11:17:29] 2025-11-24 10:16:21,242 | INFO     | [data] copytool_out thread has finished
[2025-11-24 11:17:29] 2025-11-24 10:16:21,250 | INFO     | [payload] control thread has finished
[2025-11-24 11:17:29] 2025-11-24 10:16:21,334 | INFO     | [payload] validate_post thread has finished
[2025-11-24 11:17:29] 2025-11-24 10:16:21,419 | INFO     | [job] control thread has finished
[2025-11-24 11:17:29] 2025-11-24 10:16:22,232 | INFO     | [job] queue monitor thread has finished
[2025-11-24 11:17:29] 2025-11-24 10:16:23,066 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 11:17:29] 2025-11-24 10:16:50,111 | INFO     | PID=3208426 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 11:17:29] 2025-11-24 10:16:50,111 | INFO     | .. there are 10 such processes running
[2025-11-24 11:17:29] 2025-11-24 10:16:50,113 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 11:17:29] 2025-11-24 10:16:50,113 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 11:17:29] 2025-11-24 10:16:50,113 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 11:17:29] 2025-11-24 10:17:17,635 | INFO     | [monitor] cgroup control has ended
[2025-11-24 11:17:29] 2025-11-24 10:17:18,660 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23309211502400)>', '<ExcThread(monitor, started 23308965725952)>']
[2025-11-24 11:17:29] 2025-11-24 10:17:19,245 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 11:17:29] 2025-11-24 10:17:19,246 | INFO     | [monitor] control thread has ended
[2025-11-24 11:17:29] 2025-11-24 10:17:23,686 | INFO     | all workflow threads have been joined
[2025-11-24 11:17:29] 2025-11-24 10:17:23,686 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 11:17:29] 2025-11-24 10:17:23,686 | INFO     | traces error code: 0
[2025-11-24 11:17:29] 2025-11-24 10:17:23,687 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 11:17:29] 2025-11-24 10:17:23,943 [wrapper] ==== pilot stdout END ====
[2025-11-24 11:17:29] 2025-11-24 10:17:23,947 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 11:17:29] 2025-11-24 10:17:23,951 [wrapper] pilotpid: 3208426
[2025-11-24 11:17:29] 2025-11-24 10:17:23,954 [wrapper] Pilot exit status: 0
[2025-11-24 11:17:29] 2025-11-24 10:17:23,970 [wrapper] pandaids: 6893861637
[2025-11-24 11:17:29] 2025-11-24 10:17:24,152 [wrapper] cleanup supervisor_pilot  747438 3208427
[2025-11-24 11:17:29] 2025-11-24 10:17:24,156 [wrapper] Test setup, not cleaning
[2025-11-24 11:17:29] 2025-11-24 10:17:24,160 [wrapper] apfmon messages muted
[2025-11-24 11:17:29] 2025-11-24 10:17:24,164 [wrapper] ==== wrapper stdout END ====
[2025-11-24 11:17:29] 2025-11-24 10:17:24,168 [wrapper] ==== wrapper stderr END ====
[2025-11-24 11:17:29]  *** Error codes and diagnostics ***
[2025-11-24 11:17:29]     "exeErrorCode": 0,
[2025-11-24 11:17:29]     "exeErrorDiag": "",
[2025-11-24 11:17:29]     "pilotErrorCode": 0,
[2025-11-24 11:17:29]     "pilotErrorDiag": "",
[2025-11-24 11:17:29]  *** Listing of results directory ***
[2025-11-24 11:17:29] total 1303852
[2025-11-24 11:17:29] -rw-r--r-- 1 boinc boinc    576529 Nov 20 14:50 pilot3.tar.gz
[2025-11-24 11:17:29] -rwx------ 1 boinc boinc     36292 Nov 20 15:02 runpilot2-wrapper.sh
[2025-11-24 11:17:29] -rw-r--r-- 1 boinc boinc      5112 Nov 20 15:02 queuedata.json
[2025-11-24 11:17:29] -rw-r--r-- 1 boinc boinc       100 Nov 23 19:09 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 11:17:29] -rwxr-xr-x 1 boinc boinc      7986 Nov 23 19:09 run_atlas
[2025-11-24 11:17:29] -rw-r--r-- 1 boinc boinc       105 Nov 23 19:09 job.xml
[2025-11-24 11:17:29] -rw-r--r-- 2 boinc boinc 406024789 Nov 23 19:09 EVNT.47493127._000580.pool.root.1
[2025-11-24 11:17:29] -rw-r--r-- 1 boinc boinc      6687 Nov 23 19:09 init_data.xml
[2025-11-24 11:17:29] -rw-r--r-- 2 boinc boinc     15847 Nov 23 19:09 start_atlas.sh
[2025-11-24 11:17:29] drwxrwx--x 2 boinc boinc      4096 Nov 23 19:09 shared
[2025-11-24 11:17:29] -rw-r--r-- 2 boinc boinc    590095 Nov 23 19:09 input.tar.gz
[2025-11-24 11:17:29] -rw-r--r-- 1 boinc boinc         0 Nov 23 19:09 boinc_lockfile
[2025-11-24 11:17:29] -rw-r--r-- 1 boinc boinc      2786 Nov 23 19:09 pandaJob.out
[2025-11-24 11:17:29] -rw------- 1 boinc boinc    989786 Nov 23 19:09 agis_schedconf.cvmfs.json
[2025-11-24 11:17:29] drwx------ 5 boinc boinc      4096 Nov 23 19:09 pilot3
[2025-11-24 11:17:29] -rw-r--r-- 1 boinc boinc       532 Nov 24 11:10 boinc_task_state.xml
[2025-11-24 11:17:29] -rw------- 1 boinc boinc 905978930 Nov 24 11:15 HITS.47523449._005800.pool.root.1
[2025-11-24 11:17:29] -rw------- 1 boinc boinc      1039 Nov 24 11:15 memory_monitor_summary.json
[2025-11-24 11:17:29] -rw------- 1 boinc boinc   1526164 Nov 24 11:16 agis_ddmendpoints.agis.ALL.json
[2025-11-24 11:17:29] -rw------- 1 boinc boinc   1688578 Nov 24 11:16 log.47523449._005800.job.log.tgz.1
[2025-11-24 11:17:29] -rw------- 1 boinc boinc      8593 Nov 24 11:16 heartbeat.json
[2025-11-24 11:17:29] -rw------- 1 boinc boinc        95 Nov 24 11:16 pilot_heartbeat.json
[2025-11-24 11:17:29] -rw------- 1 boinc boinc      4836 Nov 24 11:17 pilotlog.txt
[2025-11-24 11:17:29] -rw------- 1 boinc boinc   7918562 Nov 24 11:17 log.47523449._005800.job.log.1
[2025-11-24 11:17:29] -rw------- 1 boinc boinc       353 Nov 24 11:17 output.list
[2025-11-24 11:17:29] -rw-r--r-- 1 boinc boinc       620 Nov 24 11:17 runtime_log
[2025-11-24 11:17:29] -rw------- 1 boinc boinc   9625600 Nov 24 11:17 result.tar.gz
[2025-11-24 11:17:29] -rw-r--r-- 1 boinc boinc      9223 Nov 24 11:17 runtime_log.err
[2025-11-24 11:17:29] -rw------- 1 boinc boinc       671 Nov 24 11:17 NvOODmVQKg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmxlGKDm2ay3yn.diag
[2025-11-24 11:17:29] -rw-r--r-- 1 boinc boinc        28 Nov 24 11:17 wrapper_checkpoint.txt
[2025-11-24 11:17:29] -rw-r--r-- 1 boinc boinc      8192 Nov 24 11:17 boinc_mmap_file
[2025-11-24 11:17:29] -rw-r--r-- 1 boinc boinc     21129 Nov 24 11:17 stderr.txt
[2025-11-24 11:17:29] HITS file was successfully produced:
[2025-11-24 11:17:29] -rw------- 1 boinc boinc 905978930 Nov 24 11:15 shared/HITS.pool.root.1
[2025-11-24 11:17:29]  *** Contents of shared directory: ***
[2025-11-24 11:17:29] total 1291264
[2025-11-24 11:17:29] -rw-r--r-- 2 boinc boinc 406024789 Nov 23 19:09 ATLAS.root_0
[2025-11-24 11:17:29] -rw-r--r-- 2 boinc boinc     15847 Nov 23 19:09 start_atlas.sh
[2025-11-24 11:17:29] -rw-r--r-- 2 boinc boinc    590095 Nov 23 19:09 input.tar.gz
[2025-11-24 11:17:29] -rw------- 1 boinc boinc 905978930 Nov 24 11:15 HITS.pool.root.1
[2025-11-24 11:17:29] -rw------- 1 boinc boinc   9625600 Nov 24 11:17 result.tar.gz
11:17:30 (3204449): run_atlas exited; CPU time 234053.245305
11:17:30 (3204449): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN