Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:53:41 (1460044): wrapper (7.7.26015): starting
02:53:41 (1460044): wrapper: running run_atlas (--nthreads 4)
[2025-11-23 02:53:41] Arguments: --nthreads 4
[2025-11-23 02:53:41] Threads: 4
[2025-11-23 02:53:41] Checking for CVMFS
[2025-11-23 02:53:41] No cvmfs_config command found, will try listing directly
[2025-11-23 02:53:41] CVMFS is ok
[2025-11-23 02:53:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 02:53:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 02:53:41] Further information can be found at the LHC@home message board.
[2025-11-23 02:53:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 02:53:41] Checking for apptainer binary...
[2025-11-23 02:53:41] which: no apptainer in ((null))
[2025-11-23 02:53:41] apptainer is not installed, using version from CVMFS
[2025-11-23 02:53:41] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 02:53:41] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot100/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut11.grid.cesnet.cz
[2025-11-23 02:53:41] apptainer works
[2025-11-23 02:53:41] Set ATHENA_PROC_NUMBER=4
[2025-11-23 02:53:41] Set ATHENA_CORE_NUMBER=4
[2025-11-23 02:53:41] Starting ATLAS job with PandaID=6893861567
[2025-11-23 02:53:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot100/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 19:09:14]  *** The last 200 lines of the pilot log: ***
[2025-11-23 19:09:14] 2025-11-23 18:07:37,711 | INFO     | monitor loop #3879: job 0:6893861567 is in state 'finished'
[2025-11-23 19:09:14] 2025-11-23 18:07:37,711 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 19:09:14] 2025-11-23 18:07:38,122 | INFO     | time since job start (58423s) is within the limit (172800.0s)
[2025-11-23 19:09:14] 2025-11-23 18:07:38,270 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-23 19:09:14] 2025-11-23 18:07:38,292 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2727.4830703125
[2025-11-23 19:09:14] 2025-11-23 18:07:38,318 | INFO     | using path: /scratch/boinc/var/slot100/slots/0/PanDA_Pilot-6893861567/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 19:09:14] 2025-11-23 18:07:38,319 | INFO     | extracted standard info from prmon json
[2025-11-23 19:09:14] 2025-11-23 18:07:38,319 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 19:09:14] 2025-11-23 18:07:38,319 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 19:09:14] 2025-11-23 18:07:38,333 | INFO     | fitting pss+swap vs Time
[2025-11-23 19:09:14] 2025-11-23 18:07:38,334 | INFO     | sum of square deviations: 271776205150.7673
[2025-11-23 19:09:14] 2025-11-23 18:07:38,357 | INFO     | sum of deviations: 840569755996.8738
[2025-11-23 19:09:14] 2025-11-23 18:07:38,357 | INFO     | mean x: 1763892028.0982237
[2025-11-23 19:09:14] 2025-11-23 18:07:38,357 | INFO     | mean y: 2263247.16091954
[2025-11-23 19:09:14] 2025-11-23 18:07:38,357 | INFO     | intersect: -5453233825.663554
[2025-11-23 19:09:14] 2025-11-23 18:07:38,358 | INFO     | chi2: 4.120855245483457
[2025-11-23 19:09:14] 2025-11-23 18:07:38,360 | INFO     | sum of square deviations: 267538610180.71848
[2025-11-23 19:09:14] 2025-11-23 18:07:38,383 | INFO     | sum of deviations: 1022612030679.4265
[2025-11-23 19:09:14] 2025-11-23 18:07:38,384 | INFO     | mean x: 1763891875.5987394
[2025-11-23 19:09:14] 2025-11-23 18:07:38,384 | INFO     | mean y: 2269792.3571428573
[2025-11-23 19:09:14] 2025-11-23 18:07:38,384 | INFO     | intersect: -6739848855.813093
[2025-11-23 19:09:14] 2025-11-23 18:07:38,385 | INFO     | chi2: 2.219164371181869
[2025-11-23 19:09:14] 2025-11-23 18:07:38,385 | INFO     | current chi2=2.219164371181869 (change=46.1479659200813 %)
[2025-11-23 19:09:14] 2025-11-23 18:07:38,386 | INFO     | sum of square deviations: 263345295110.6696
[2025-11-23 19:09:14] 2025-11-23 18:07:38,406 | INFO     | sum of deviations: 1034582154402.5906
[2025-11-23 19:09:14] 2025-11-23 18:07:38,406 | INFO     | mean x: 1763891723.0992608
[2025-11-23 19:09:14] 2025-11-23 18:07:38,406 | INFO     | mean y: 2270225.5575501584
[2025-11-23 19:09:14] 2025-11-23 18:07:38,406 | INFO     | intersect: -6927380438.032355
[2025-11-23 19:09:14] 2025-11-23 18:07:38,407 | INFO     | chi2: 2.170032551345884
[2025-11-23 19:09:14] 2025-11-23 18:07:38,407 | INFO     | current chi2=2.170032551345884 (change=2.2139783998883593 %)
[2025-11-23 19:09:14] 2025-11-23 18:07:38,408 | INFO     | right removable region: 946
[2025-11-23 19:09:14] 2025-11-23 18:07:38,409 | INFO     | sum of square deviations: 267538552840.71844
[2025-11-23 19:09:14] 2025-11-23 18:07:38,431 | INFO     | sum of deviations: 653645294040.124
[2025-11-23 19:09:14] 2025-11-23 18:07:38,432 | INFO     | mean x: 1763892180.5987394
[2025-11-23 19:09:14] 2025-11-23 18:07:38,432 | INFO     | mean y: 2269963.2699579834
[2025-11-23 19:09:14] 2025-11-23 18:07:38,432 | INFO     | intersect: -4307239117.946325
[2025-11-23 19:09:14] 2025-11-23 18:07:38,433 | INFO     | chi2: 2.094906844162396
[2025-11-23 19:09:14] 2025-11-23 18:07:38,433 | INFO     | current chi2=2.094906844162396 (change=49.16329937921364 %)
[2025-11-23 19:09:14] 2025-11-23 18:07:38,434 | INFO     | sum of square deviations: 263345180430.66968
[2025-11-23 19:09:14] 2025-11-23 18:07:38,456 | INFO     | sum of deviations: 619151640385.5568
[2025-11-23 19:09:14] 2025-11-23 18:07:38,457 | INFO     | mean x: 1763892333.0992608
[2025-11-23 19:09:14] 2025-11-23 18:07:38,457 | INFO     | mean y: 2271217.3664202746
[2025-11-23 19:09:14] 2025-11-23 18:07:38,457 | INFO     | intersect: -4144821316.1513276
[2025-11-23 19:09:14] 2025-11-23 18:07:38,458 | INFO     | chi2: 2.0681145195515285
[2025-11-23 19:09:14] 2025-11-23 18:07:38,458 | INFO     | current chi2=2.0681145195515285 (change=1.2789267783207703 %)
[2025-11-23 19:09:14] 2025-11-23 18:07:38,458 | INFO     | left removable region: 20
[2025-11-23 19:09:14] 2025-11-23 18:07:38,459 | INFO     | sum of square deviations: 246211430493.95853
[2025-11-23 19:09:14] 2025-11-23 18:07:38,481 | INFO     | sum of deviations: 760842671295.7249
[2025-11-23 19:09:14] 2025-11-23 18:07:38,481 | INFO     | mean x: 1763892302.601512
[2025-11-23 19:09:14] 2025-11-23 18:07:38,482 | INFO     | mean y: 2280213.6252699783
[2025-11-23 19:09:14] 2025-11-23 18:07:38,482 | INFO     | intersect: -5448500559.212294
[2025-11-23 19:09:14] 2025-11-23 18:07:38,483 | INFO     | chi2: 0.09146217206995501
[2025-11-23 19:09:14] 2025-11-23 18:07:38,483 | INFO     | current memory leak: 3.09 B/s (using 926 data points, chi2=0.09)
[2025-11-23 19:09:14] 2025-11-23 18:07:38,484 | INFO     | could have reported an average CPU frequency of 2704 MHz (36 samples)
[2025-11-23 19:09:14] 2025-11-23 18:07:38,484 | INFO     | ..............................
[2025-11-23 19:09:14] 2025-11-23 18:07:38,484 | INFO     | . Timing measurements:
[2025-11-23 19:09:14] 2025-11-23 18:07:38,484 | INFO     | . get job = 0 s
[2025-11-23 19:09:14] 2025-11-23 18:07:38,484 | INFO     | . initial setup = 1 s
[2025-11-23 19:09:14] 2025-11-23 18:07:38,484 | INFO     | . payload setup = 9 s
[2025-11-23 19:09:14] 2025-11-23 18:07:38,485 | INFO     | . stage-in = 0 s
[2025-11-23 19:09:14] 2025-11-23 18:07:38,485 | INFO     | . payload execution = 58376 s
[2025-11-23 19:09:14] 2025-11-23 18:07:38,485 | INFO     | . stage-out = 2 s
[2025-11-23 19:09:14] 2025-11-23 18:07:38,485 | INFO     | . log creation = 0 s
[2025-11-23 19:09:14] 2025-11-23 18:07:38,485 | INFO     | ..............................
[2025-11-23 19:09:14] 2025-11-23 18:07:38,852 | INFO     | 
[2025-11-23 19:09:14] 2025-11-23 18:07:38,852 | INFO     | job summary report
[2025-11-23 19:09:14] 2025-11-23 18:07:38,852 | INFO     | --------------------------------------------------
[2025-11-23 19:09:14] 2025-11-23 18:07:38,852 | INFO     | PanDA job id: 6893861567
[2025-11-23 19:09:14] 2025-11-23 18:07:38,852 | INFO     | task id: 47523449
[2025-11-23 19:09:14] 2025-11-23 18:07:38,852 | INFO     | errors: (none)
[2025-11-23 19:09:14] 2025-11-23 18:07:38,852 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 19:09:14] 2025-11-23 18:07:38,852 | INFO     | pilot state: finished 
[2025-11-23 19:09:14] 2025-11-23 18:07:38,852 | INFO     | transexitcode: 0
[2025-11-23 19:09:14] 2025-11-23 18:07:38,852 | INFO     | exeerrorcode: 0
[2025-11-23 19:09:14] 2025-11-23 18:07:38,853 | INFO     | exeerrordiag: 
[2025-11-23 19:09:14] 2025-11-23 18:07:38,853 | INFO     | exitcode: 0
[2025-11-23 19:09:14] 2025-11-23 18:07:38,853 | INFO     | exitmsg: OK
[2025-11-23 19:09:14] 2025-11-23 18:07:38,853 | INFO     | cpuconsumptiontime: 229797 s
[2025-11-23 19:09:14] 2025-11-23 18:07:38,853 | INFO     | nevents: 1000
[2025-11-23 19:09:14] 2025-11-23 18:07:38,853 | INFO     | neventsw: 0
[2025-11-23 19:09:14] 2025-11-23 18:07:38,853 | INFO     | pid: 1471472
[2025-11-23 19:09:14] 2025-11-23 18:07:38,853 | INFO     | pgrp: 1471472
[2025-11-23 19:09:14] 2025-11-23 18:07:38,853 | INFO     | corecount: 4
[2025-11-23 19:09:14] 2025-11-23 18:07:38,853 | INFO     | event service: False
[2025-11-23 19:09:14] 2025-11-23 18:07:38,853 | INFO     | sizes: {0: 2298591, 1: 2298790, 8: 2299052, 12: 2299080, 58389: 2353501, 58393: 2362519, 58395: 2362703, 58405: 2362949}
[2025-11-23 19:09:14] 2025-11-23 18:07:38,853 | INFO     | --------------------------------------------------
[2025-11-23 19:09:14] 2025-11-23 18:07:38,854 | INFO     | 
[2025-11-23 19:09:14] 2025-11-23 18:07:38,854 | INFO     | executing command: ls -lF /scratch/boinc/var/slot100/slots/0
[2025-11-23 19:09:14] 2025-11-23 18:07:38,886 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 19:09:14] 2025-11-23 18:07:38,887 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 19:09:14] 2025-11-23 18:07:38,887 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 19:09:14] 2025-11-23 18:07:38,887 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 19:09:14] 2025-11-23 18:07:38,887 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 19:09:14] 2025-11-23 18:07:38,887 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 19:09:14] 2025-11-23 18:07:38,887 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 19:09:14] 2025-11-23 18:07:38,887 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 19:09:14] 2025-11-23 18:07:38,887 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 19:09:14] 2025-11-23 18:07:38,887 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 19:09:14] 2025-11-23 18:07:38,887 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 19:09:14] 2025-11-23 18:07:38,888 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 19:09:14] 2025-11-23 18:07:38,888 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 19:09:14] 2025-11-23 18:07:38,888 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 19:09:14] 2025-11-23 18:07:38,888 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 19:09:14] 2025-11-23 18:07:38,888 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 19:09:14] 2025-11-23 18:07:38,888 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 19:09:14] 2025-11-23 18:07:38,888 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 19:09:14] 2025-11-23 18:07:38,888 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 19:09:14] 2025-11-23 18:07:38,888 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 19:09:14] 2025-11-23 18:07:38,889 | INFO     | job 6893861567 has completed (purged errors)
[2025-11-23 19:09:14] 2025-11-23 18:07:38,889 | INFO     | overall cleanup function is called
[2025-11-23 19:09:14] 2025-11-23 18:07:39,904 | INFO     | --- collectZombieJob: --- 10, [1471472]
[2025-11-23 19:09:14] 2025-11-23 18:07:39,905 | INFO     | zombie collector waiting for pid 1471472
[2025-11-23 19:09:14] 2025-11-23 18:07:39,905 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 19:09:14] 2025-11-23 18:07:39,905 | INFO     | collected zombie processes
[2025-11-23 19:09:14] 2025-11-23 18:07:39,905 | INFO     | will attempt to kill all subprocesses of pid=1471472
[2025-11-23 19:09:14] 2025-11-23 18:07:40,718 | INFO     | process IDs to be killed: [1471472] (in reverse order)
[2025-11-23 19:09:14] 2025-11-23 18:07:40,996 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 19:09:14] 2025-11-23 18:07:40,997 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 19:09:14] 2025-11-23 18:07:41,030 | INFO     | did not find any defunct processes belonging to 1471472
[2025-11-23 19:09:14] 2025-11-23 18:07:41,062 | INFO     | did not find any defunct processes belonging to 1471472
[2025-11-23 19:09:14] 2025-11-23 18:07:41,064 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 19:09:14] 2025-11-23 18:07:41,064 | INFO     | ready for new job
[2025-11-23 19:09:14] 2025-11-23 18:07:41,064 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 19:09:14] 2025-11-23 18:07:41,071 | INFO     | ***************************************
[2025-11-23 19:09:14] 2025-11-23 18:07:41,071 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 19:09:14] 2025-11-23 18:07:41,071 | INFO     | ***************************************
[2025-11-23 19:09:14] 2025-11-23 18:07:41,071 | INFO     | 
[2025-11-23 19:09:14] 2025-11-23 18:07:41,080 | INFO     | architecture information:
[2025-11-23 19:09:14] 2025-11-23 18:07:41,081 | INFO     | executing command: cat /etc/os-release
[2025-11-23 19:09:14] 2025-11-23 18:07:41,104 | INFO     | cat /etc/os-release:
[2025-11-23 19:09:14] NAME="CentOS Linux"
[2025-11-23 19:09:14] VERSION="7 (Core)"
[2025-11-23 19:09:14] ID="centos"
[2025-11-23 19:09:14] ID_LIKE="rhel fedora"
[2025-11-23 19:09:14] VERSION_ID="7"
[2025-11-23 19:09:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 19:09:14] ANSI_COLOR="0;31"
[2025-11-23 19:09:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 19:09:14] HOME_URL="https://www.centos.org/"
[2025-11-23 19:09:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 19:09:14] 
[2025-11-23 19:09:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 19:09:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 19:09:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 19:09:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 19:09:14] 
[2025-11-23 19:09:14] 2025-11-23 18:07:41,104 | INFO     | ***************************************
[2025-11-23 19:09:14] 2025-11-23 18:07:41,607 | INFO     | executing command: df -mP /scratch/boinc/var/slot100/slots/0
[2025-11-23 19:09:14] 2025-11-23 18:07:41,629 | INFO     | sufficient remaining disk space (3299181854720 B)
[2025-11-23 19:09:14] 2025-11-23 18:07:41,629 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 19:09:14] 2025-11-23 18:07:41,629 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 19:09:14] 2025-11-23 18:07:41,630 | INFO     | update_server=False
[2025-11-23 19:09:14] 2025-11-23 18:07:41,630 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 19:09:14] 2025-11-23 18:07:41,630 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 19:09:14] 2025-11-23 18:07:41,630 | INFO     | aborting loop
[2025-11-23 19:09:14] 2025-11-23 18:07:42,115 | INFO     | all job control threads have been joined
[2025-11-23 19:09:14] 2025-11-23 18:07:42,435 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 19:09:14] 2025-11-23 18:07:42,498 | INFO     | all data control threads have been joined
[2025-11-23 19:09:14] 2025-11-23 18:07:42,575 | INFO     | all payload control threads have been joined
[2025-11-23 19:09:14] 2025-11-23 18:07:42,636 | INFO     | [job] retrieve thread has finished
[2025-11-23 19:09:14] 2025-11-23 18:07:42,636 | INFO     | [job] job monitor thread has finished
[2025-11-23 19:09:14] 2025-11-23 18:07:43,121 | INFO     | [job] control thread has finished
[2025-11-23 19:09:14] 2025-11-23 18:07:43,185 | INFO     | [job] validate thread has finished
[2025-11-23 19:09:14] 2025-11-23 18:07:43,239 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 19:09:14] 2025-11-23 18:07:43,504 | INFO     | [data] control thread has finished
[2025-11-23 19:09:14] 2025-11-23 18:07:43,566 | INFO     | [payload] validate_post thread has finished
[2025-11-23 19:09:14] 2025-11-23 18:07:43,581 | INFO     | [payload] control thread has finished
[2025-11-23 19:09:14] 2025-11-23 18:07:43,598 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 19:09:14] 2025-11-23 18:07:43,602 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 19:09:14] 2025-11-23 18:07:43,748 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 19:09:14] 2025-11-23 18:07:43,754 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 19:09:14] 2025-11-23 18:07:43,788 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 19:09:14] 2025-11-23 18:07:43,808 | INFO     | [payload] failed_post thread has finished
[2025-11-23 19:09:14] 2025-11-23 18:07:43,932 | INFO     | [data] copytool_in thread has finished
[2025-11-23 19:09:14] 2025-11-23 18:07:44,441 | INFO     | [data] copytool_out thread has finished
[2025-11-23 19:09:14] 2025-11-23 18:07:44,604 | INFO     | [job] queue monitor thread has finished
[2025-11-23 19:09:14] 2025-11-23 18:07:47,761 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 19:09:14] 2025-11-23 18:08:12,142 | INFO     | PID=1464093 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 19:09:14] 2025-11-23 18:08:12,142 | INFO     | .. there are 9 such processes running
[2025-11-23 19:09:14] 2025-11-23 18:08:12,143 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 19:09:14] 2025-11-23 18:08:12,143 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 19:09:14] 2025-11-23 18:08:12,143 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 19:09:14] 2025-11-23 18:08:33,864 | INFO     | [monitor] cgroup control has ended
[2025-11-23 19:09:14] 2025-11-23 18:08:35,771 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23167664039744)>', '<ExcThread(monitor, started 23167424755456)>']
[2025-11-23 19:09:14] 2025-11-23 18:08:36,267 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 19:09:14] 2025-11-23 18:08:36,268 | INFO     | [monitor] control thread has ended
[2025-11-23 19:09:14] 2025-11-23 18:08:40,796 | INFO     | all workflow threads have been joined
[2025-11-23 19:09:14] 2025-11-23 18:08:40,796 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 19:09:14] 2025-11-23 18:08:40,796 | INFO     | traces error code: 0
[2025-11-23 19:09:14] 2025-11-23 18:08:40,796 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 19:09:14] 2025-11-23 18:08:40,940 [wrapper] ==== pilot stdout END ====
[2025-11-23 19:09:14] 2025-11-23 18:08:40,945 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 19:09:14] 2025-11-23 18:08:40,948 [wrapper] pilotpid: 1464093
[2025-11-23 19:09:14] 2025-11-23 18:08:40,951 [wrapper] Pilot exit status: 0
[2025-11-23 19:09:14] 2025-11-23 18:08:40,965 [wrapper] pandaids: 6893861567
[2025-11-23 19:09:14] 2025-11-23 18:08:41,154 [wrapper] cleanup supervisor_pilot 3187033 1464094
[2025-11-23 19:09:14] 2025-11-23 18:08:41,158 [wrapper] Test setup, not cleaning
[2025-11-23 19:09:14] 2025-11-23 18:08:41,162 [wrapper] apfmon messages muted
[2025-11-23 19:09:14] 2025-11-23 18:08:41,166 [wrapper] ==== wrapper stdout END ====
[2025-11-23 19:09:14] 2025-11-23 18:08:41,170 [wrapper] ==== wrapper stderr END ====
[2025-11-23 19:09:14]  *** Error codes and diagnostics ***
[2025-11-23 19:09:14]     "exeErrorCode": 0,
[2025-11-23 19:09:14]     "exeErrorDiag": "",
[2025-11-23 19:09:14]     "pilotErrorCode": 0,
[2025-11-23 19:09:14]     "pilotErrorDiag": "",
[2025-11-23 19:09:14]  *** Listing of results directory ***
[2025-11-23 19:09:14] total 1313908
[2025-11-23 19:09:14] -rw-r--r-- 1 boinc boinc    576529 Nov 20 14:50 pilot3.tar.gz
[2025-11-23 19:09:14] -rw-r--r-- 1 boinc boinc      5112 Nov 20 14:58 queuedata.json
[2025-11-23 19:09:14] -rwx------ 1 boinc boinc     36292 Nov 20 14:59 runpilot2-wrapper.sh
[2025-11-23 19:09:14] -rw-r--r-- 1 boinc boinc       100 Nov 23 01:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 19:09:14] -rwxr-xr-x 1 boinc boinc      7986 Nov 23 01:55 run_atlas
[2025-11-23 19:09:14] -rw-r--r-- 1 boinc boinc       105 Nov 23 01:55 job.xml
[2025-11-23 19:09:14] -rw-r--r-- 2 boinc boinc 411194440 Nov 23 02:53 EVNT.47493127._000575.pool.root.1
[2025-11-23 19:09:14] -rw-r--r-- 1 boinc boinc      6687 Nov 23 02:53 init_data.xml
[2025-11-23 19:09:14] -rw-r--r-- 2 boinc boinc     15847 Nov 23 02:53 start_atlas.sh
[2025-11-23 19:09:14] drwxrwx--x 2 boinc boinc      4096 Nov 23 02:53 shared
[2025-11-23 19:09:14] -rw-r--r-- 2 boinc boinc    590104 Nov 23 02:53 input.tar.gz
[2025-11-23 19:09:14] -rw-r--r-- 1 boinc boinc         0 Nov 23 02:53 boinc_lockfile
[2025-11-23 19:09:14] -rw-r--r-- 1 boinc boinc      2782 Nov 23 02:53 pandaJob.out
[2025-11-23 19:09:14] -rw------- 1 boinc boinc    989784 Nov 23 02:53 agis_schedconf.cvmfs.json
[2025-11-23 19:09:14] drwx------ 5 boinc boinc      4096 Nov 23 02:53 pilot3
[2025-11-23 19:09:14] -rw-r--r-- 1 boinc boinc       532 Nov 23 18:59 boinc_task_state.xml
[2025-11-23 19:09:14] -rw------- 1 boinc boinc 910964849 Nov 23 19:06 HITS.47523449._005741.pool.root.1
[2025-11-23 19:09:14] -rw------- 1 boinc boinc      1039 Nov 23 19:07 memory_monitor_summary.json
[2025-11-23 19:09:14] -rw------- 1 boinc boinc   1526164 Nov 23 19:07 agis_ddmendpoints.agis.ALL.json
[2025-11-23 19:09:14] -rw------- 1 boinc boinc   1692601 Nov 23 19:07 log.47523449._005741.job.log.tgz.1
[2025-11-23 19:09:14] -rw------- 1 boinc boinc      8590 Nov 23 19:07 heartbeat.json
[2025-11-23 19:09:14] -rw------- 1 boinc boinc        95 Nov 23 19:08 pilot_heartbeat.json
[2025-11-23 19:09:14] -rw------- 1 boinc boinc      4835 Nov 23 19:08 pilotlog.txt
[2025-11-23 19:09:14] -rw------- 1 boinc boinc   7985885 Nov 23 19:08 log.47523449._005741.job.log.1
[2025-11-23 19:09:14] -rw------- 1 boinc boinc       353 Nov 23 19:08 output.list
[2025-11-23 19:09:14] -rw-r--r-- 1 boinc boinc       620 Nov 23 19:08 runtime_log
[2025-11-23 19:09:14] -rw------- 1 boinc boinc   9697280 Nov 23 19:08 result.tar.gz
[2025-11-23 19:09:14] -rw------- 1 boinc boinc       671 Nov 23 19:08 tBNKDmPNKg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmplGKDmWqFLWo.diag
[2025-11-23 19:09:14] -rw-r--r-- 1 boinc boinc      9223 Nov 23 19:08 runtime_log.err
[2025-11-23 19:09:14] -rw-r--r-- 1 boinc boinc        28 Nov 23 19:09 wrapper_checkpoint.txt
[2025-11-23 19:09:14] -rw-r--r-- 1 boinc boinc      8192 Nov 23 19:09 boinc_mmap_file
[2025-11-23 19:09:14] -rw-r--r-- 1 boinc boinc     21124 Nov 23 19:09 stderr.txt
[2025-11-23 19:09:14] HITS file was successfully produced:
[2025-11-23 19:09:14] -rw------- 1 boinc boinc 910964849 Nov 23 19:06 shared/HITS.pool.root.1
[2025-11-23 19:09:14]  *** Contents of shared directory: ***
[2025-11-23 19:09:14] total 1301252
[2025-11-23 19:09:14] -rw-r--r-- 2 boinc boinc 411194440 Nov 23 02:53 ATLAS.root_0
[2025-11-23 19:09:14] -rw-r--r-- 2 boinc boinc     15847 Nov 23 02:53 start_atlas.sh
[2025-11-23 19:09:14] -rw-r--r-- 2 boinc boinc    590104 Nov 23 02:53 input.tar.gz
[2025-11-23 19:09:14] -rw------- 1 boinc boinc 910964849 Nov 23 19:06 HITS.pool.root.1
[2025-11-23 19:09:14] -rw------- 1 boinc boinc   9697280 Nov 23 19:08 result.tar.gz
19:09:15 (1460044): run_atlas exited; CPU time 232533.822071
19:09:15 (1460044): called boinc_finish(0)

</stderr_txt>
]]>

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