Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:42:30 (2485211): wrapper (7.7.26015): starting
01:42:30 (2485211): wrapper: running run_atlas (--nthreads 4)
[2025-11-22 01:42:30] Arguments: --nthreads 4
[2025-11-22 01:42:30] Threads: 4
[2025-11-22 01:42:30] Checking for CVMFS
[2025-11-22 01:42:30] No cvmfs_config command found, will try listing directly
[2025-11-22 01:42:30] CVMFS is ok
[2025-11-22 01:42:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 01:42:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 01:42:30] Further information can be found at the LHC@home message board.
[2025-11-22 01:42:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 01:42:30] Checking for apptainer binary...
[2025-11-22 01:42:30] which: no apptainer in ((null))
[2025-11-22 01:42:30] apptainer is not installed, using version from CVMFS
[2025-11-22 01:42:30] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 01:42:31] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2025-11-22 01:42:31] apptainer works
[2025-11-22 01:42:31] Set ATHENA_PROC_NUMBER=4
[2025-11-22 01:42:31] Set ATHENA_CORE_NUMBER=4
[2025-11-22 01:42:31] Starting ATLAS job with PandaID=6893848273
[2025-11-22 01:42:31] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 23:02:57]  *** The last 200 lines of the pilot log: ***
[2025-11-22 23:02:57] 2025-11-22 21:55:04,266 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2604.166375
[2025-11-22 23:02:57] 2025-11-22 21:55:04,274 | INFO     | using path: /scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6893848273/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 23:02:57] 2025-11-22 21:55:04,275 | INFO     | extracted standard info from prmon json
[2025-11-22 23:02:57] 2025-11-22 21:55:04,275 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 23:02:57] 2025-11-22 21:55:04,275 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 23:02:57] 2025-11-22 21:55:04,299 | INFO     | fitting pss+swap vs Time
[2025-11-22 23:02:57] 2025-11-22 21:55:04,301 | INFO     | sum of square deviations: 607085801250.0
[2025-11-22 23:02:57] 2025-11-22 21:55:04,339 | INFO     | sum of deviations: 1918572400221.0002
[2025-11-22 23:02:57] 2025-11-22 21:55:04,340 | INFO     | mean x: 1763810313.0
[2025-11-22 23:02:57] 2025-11-22 21:55:04,340 | INFO     | mean y: 2321390.5283772983
[2025-11-22 23:02:57] 2025-11-22 21:55:04,340 | INFO     | intersect: -5571845850.377693
[2025-11-22 23:02:57] 2025-11-22 21:55:04,342 | INFO     | chi2: 3.578647694719955
[2025-11-22 23:02:57] 2025-11-22 21:55:04,344 | INFO     | sum of square deviations: 599835646707.5
[2025-11-22 23:02:57] 2025-11-22 21:55:04,349 | INFO     | monitor loop #5530: job 0:6893848273 is in state 'finished'
[2025-11-22 23:02:57] 2025-11-22 21:55:04,359 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 23:02:57] 2025-11-22 21:55:04,386 | INFO     | sum of deviations: 2149899653819.9998
[2025-11-22 23:02:57] 2025-11-22 21:55:04,387 | INFO     | mean x: 1763810160.5
[2025-11-22 23:02:57] 2025-11-22 21:55:04,387 | INFO     | mean y: 2326253.6934189405
[2025-11-22 23:02:57] 2025-11-22 21:55:04,387 | INFO     | intersect: -6319430171.216524
[2025-11-22 23:02:57] 2025-11-22 21:55:04,389 | INFO     | chi2: 1.9005446333648983
[2025-11-22 23:02:57] 2025-11-22 21:55:04,389 | INFO     | current chi2=1.9005446333648983 (change=46.89210015925794 %)
[2025-11-22 23:02:57] 2025-11-22 21:55:04,391 | INFO     | sum of square deviations: 592643446740.0
[2025-11-22 23:02:57] 2025-11-22 21:55:04,432 | INFO     | sum of deviations: 2138489602050.9998
[2025-11-22 23:02:57] 2025-11-22 21:55:04,432 | INFO     | mean x: 1763810008.0
[2025-11-22 23:02:57] 2025-11-22 21:55:04,432 | INFO     | mean y: 2326011.269943594
[2025-11-22 23:02:57] 2025-11-22 21:55:04,432 | INFO     | intersect: -6362191107.49652
[2025-11-22 23:02:57] 2025-11-22 21:55:04,434 | INFO     | chi2: 1.8916654329709772
[2025-11-22 23:02:57] 2025-11-22 21:55:04,434 | INFO     | current chi2=1.8916654329709772 (change=0.46719241621811025 %)
[2025-11-22 23:02:57] 2025-11-22 21:55:04,434 | INFO     | right removable region: 1240
[2025-11-22 23:02:57] 2025-11-22 21:55:04,436 | INFO     | sum of square deviations: 599835646707.5
[2025-11-22 23:02:57] 2025-11-22 21:55:04,477 | INFO     | sum of deviations: 1688776803216.4998
[2025-11-22 23:02:57] 2025-11-22 21:55:04,477 | INFO     | mean x: 1763810465.5
[2025-11-22 23:02:57] 2025-11-22 21:55:04,477 | INFO     | mean y: 2326217.6332263243
[2025-11-22 23:02:57] 2025-11-22 21:55:04,477 | INFO     | intersect: -4963504365.72222
[2025-11-22 23:02:57] 2025-11-22 21:55:04,479 | INFO     | chi2: 1.8263900705526677
[2025-11-22 23:02:57] 2025-11-22 21:55:04,479 | INFO     | current chi2=1.8263900705526677 (change=48.96423938999699 %)
[2025-11-22 23:02:57] 2025-11-22 21:55:04,481 | INFO     | sum of square deviations: 592643446740.0
[2025-11-22 23:02:57] 2025-11-22 21:55:04,523 | INFO     | sum of deviations: 1663757208068.9998
[2025-11-22 23:02:57] 2025-11-22 21:55:04,523 | INFO     | mean x: 1763810618.0
[2025-11-22 23:02:57] 2025-11-22 21:55:04,523 | INFO     | mean y: 2326747.8186946013
[2025-11-22 23:02:57] 2025-11-22 21:55:04,523 | INFO     | intersect: -4949305883.080135
[2025-11-22 23:02:57] 2025-11-22 21:55:04,525 | INFO     | chi2: 1.8247124308644014
[2025-11-22 23:02:57] 2025-11-22 21:55:04,525 | INFO     | current chi2=1.8247124308644014 (change=0.0918554976461644 %)
[2025-11-22 23:02:57] 2025-11-22 21:55:04,525 | INFO     | left removable region: 20
[2025-11-22 23:02:57] 2025-11-22 21:55:04,527 | INFO     | sum of square deviations: 563063822365.0
[2025-11-22 23:02:57] 2025-11-22 21:55:04,565 | INFO     | sum of deviations: 1858421667627.4995
[2025-11-22 23:02:57] 2025-11-22 21:55:04,565 | INFO     | mean x: 1763810587.5
[2025-11-22 23:02:57] 2025-11-22 21:55:04,566 | INFO     | mean y: 2331859.0663934425
[2025-11-22 23:02:57] 2025-11-22 21:55:04,566 | INFO     | intersect: -5819217463.056319
[2025-11-22 23:02:57] 2025-11-22 21:55:04,568 | INFO     | chi2: 0.1229743849632592
[2025-11-22 23:02:57] 2025-11-22 21:55:04,568 | INFO     | current memory leak: 3.30 B/s (using 1220 data points, chi2=0.12)
[2025-11-22 23:02:57] 2025-11-22 21:55:04,569 | INFO     | could have reported an average CPU frequency of 2597 MHz (46 samples)
[2025-11-22 23:02:57] 2025-11-22 21:55:04,569 | INFO     | ..............................
[2025-11-22 23:02:57] 2025-11-22 21:55:04,569 | INFO     | . Timing measurements:
[2025-11-22 23:02:57] 2025-11-22 21:55:04,569 | INFO     | . get job = 0 s
[2025-11-22 23:02:57] 2025-11-22 21:55:04,570 | INFO     | . initial setup = 1 s
[2025-11-22 23:02:57] 2025-11-22 21:55:04,570 | INFO     | . payload setup = 5 s
[2025-11-22 23:02:57] 2025-11-22 21:55:04,570 | INFO     | . stage-in = 0 s
[2025-11-22 23:02:57] 2025-11-22 21:55:04,570 | INFO     | . payload execution = 76305 s
[2025-11-22 23:02:57] 2025-11-22 21:55:04,570 | INFO     | . stage-out = 2 s
[2025-11-22 23:02:57] 2025-11-22 21:55:04,570 | INFO     | . log creation = 0 s
[2025-11-22 23:02:57] 2025-11-22 21:55:04,570 | INFO     | ..............................
[2025-11-22 23:02:57] 2025-11-22 21:55:04,809 | INFO     | 
[2025-11-22 23:02:57] 2025-11-22 21:55:04,810 | INFO     | job summary report
[2025-11-22 23:02:57] 2025-11-22 21:55:04,810 | INFO     | --------------------------------------------------
[2025-11-22 23:02:57] 2025-11-22 21:55:04,810 | INFO     | PanDA job id: 6893848273
[2025-11-22 23:02:57] 2025-11-22 21:55:04,810 | INFO     | task id: 47523449
[2025-11-22 23:02:57] 2025-11-22 21:55:04,810 | INFO     | errors: (none)
[2025-11-22 23:02:57] 2025-11-22 21:55:04,810 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 23:02:57] 2025-11-22 21:55:04,811 | INFO     | pilot state: finished 
[2025-11-22 23:02:57] 2025-11-22 21:55:04,811 | INFO     | transexitcode: 0
[2025-11-22 23:02:57] 2025-11-22 21:55:04,811 | INFO     | exeerrorcode: 0
[2025-11-22 23:02:57] 2025-11-22 21:55:04,811 | INFO     | exeerrordiag: 
[2025-11-22 23:02:57] 2025-11-22 21:55:04,811 | INFO     | exitcode: 0
[2025-11-22 23:02:57] 2025-11-22 21:55:04,811 | INFO     | exitmsg: OK
[2025-11-22 23:02:57] 2025-11-22 21:55:04,811 | INFO     | cpuconsumptiontime: 302352 s
[2025-11-22 23:02:57] 2025-11-22 21:55:04,811 | INFO     | nevents: 1000
[2025-11-22 23:02:57] 2025-11-22 21:55:04,812 | INFO     | neventsw: 0
[2025-11-22 23:02:57] 2025-11-22 21:55:04,812 | INFO     | pid: 2498065
[2025-11-22 23:02:57] 2025-11-22 21:55:04,812 | INFO     | pgrp: 2498065
[2025-11-22 23:02:57] 2025-11-22 21:55:04,812 | INFO     | corecount: 4
[2025-11-22 23:02:57] 2025-11-22 21:55:04,812 | INFO     | event service: False
[2025-11-22 23:02:57] 2025-11-22 21:55:04,812 | INFO     | sizes: {0: 2298818, 1: 2298846, 4: 2299108, 11: 2299136, 76316: 2359034, 76319: 2368050, 76322: 2368234, 76327: 2368480}
[2025-11-22 23:02:57] 2025-11-22 21:55:04,812 | INFO     | --------------------------------------------------
[2025-11-22 23:02:57] 2025-11-22 21:55:04,812 | INFO     | 
[2025-11-22 23:02:57] 2025-11-22 21:55:04,813 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/0
[2025-11-22 23:02:57] 2025-11-22 21:55:04,830 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 23:02:57] 2025-11-22 21:55:04,831 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 23:02:57] 2025-11-22 21:55:04,831 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 23:02:57] 2025-11-22 21:55:04,831 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 23:02:57] 2025-11-22 21:55:04,831 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 23:02:57] 2025-11-22 21:55:04,831 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 23:02:57] 2025-11-22 21:55:04,831 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 23:02:57] 2025-11-22 21:55:04,832 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 23:02:57] 2025-11-22 21:55:04,832 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 23:02:57] 2025-11-22 21:55:04,832 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 23:02:57] 2025-11-22 21:55:04,832 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 23:02:57] 2025-11-22 21:55:04,832 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 23:02:57] 2025-11-22 21:55:04,832 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 23:02:57] 2025-11-22 21:55:04,833 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 23:02:57] 2025-11-22 21:55:04,833 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 23:02:57] 2025-11-22 21:55:04,833 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 23:02:57] 2025-11-22 21:55:04,833 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 23:02:57] 2025-11-22 21:55:04,833 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 23:02:57] 2025-11-22 21:55:04,833 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 23:02:57] 2025-11-22 21:55:04,833 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 23:02:57] 2025-11-22 21:55:04,834 | INFO     | job 6893848273 has completed (purged errors)
[2025-11-22 23:02:57] 2025-11-22 21:55:04,834 | INFO     | overall cleanup function is called
[2025-11-22 23:02:57] 2025-11-22 21:55:05,847 | INFO     | --- collectZombieJob: --- 10, [2498065]
[2025-11-22 23:02:57] 2025-11-22 21:55:05,847 | INFO     | zombie collector waiting for pid 2498065
[2025-11-22 23:02:57] 2025-11-22 21:55:05,847 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 23:02:57] 2025-11-22 21:55:05,847 | INFO     | collected zombie processes
[2025-11-22 23:02:57] 2025-11-22 21:55:05,848 | INFO     | will attempt to kill all subprocesses of pid=2498065
[2025-11-22 23:02:57] 2025-11-22 21:55:06,195 | INFO     | process IDs to be killed: [2498065] (in reverse order)
[2025-11-22 23:02:57] 2025-11-22 21:55:06,274 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 23:02:57] 2025-11-22 21:55:06,274 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 23:02:57] 2025-11-22 21:55:06,283 | INFO     | did not find any defunct processes belonging to 2498065
[2025-11-22 23:02:57] 2025-11-22 21:55:06,291 | INFO     | did not find any defunct processes belonging to 2498065
[2025-11-22 23:02:57] 2025-11-22 21:55:06,293 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 23:02:57] 2025-11-22 21:55:06,293 | INFO     | ready for new job
[2025-11-22 23:02:57] 2025-11-22 21:55:06,293 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 23:02:57] 2025-11-22 21:55:06,298 | INFO     | ***************************************
[2025-11-22 23:02:57] 2025-11-22 21:55:06,298 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 23:02:57] 2025-11-22 21:55:06,298 | INFO     | ***************************************
[2025-11-22 23:02:57] 2025-11-22 21:55:06,298 | INFO     | 
[2025-11-22 23:02:57] 2025-11-22 21:55:06,301 | INFO     | architecture information:
[2025-11-22 23:02:57] 2025-11-22 21:55:06,301 | INFO     | executing command: cat /etc/os-release
[2025-11-22 23:02:57] 2025-11-22 21:55:06,314 | INFO     | cat /etc/os-release:
[2025-11-22 23:02:57] NAME="CentOS Linux"
[2025-11-22 23:02:57] VERSION="7 (Core)"
[2025-11-22 23:02:57] ID="centos"
[2025-11-22 23:02:57] ID_LIKE="rhel fedora"
[2025-11-22 23:02:57] VERSION_ID="7"
[2025-11-22 23:02:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 23:02:57] ANSI_COLOR="0;31"
[2025-11-22 23:02:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 23:02:57] HOME_URL="https://www.centos.org/"
[2025-11-22 23:02:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 23:02:57] 
[2025-11-22 23:02:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 23:02:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 23:02:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 23:02:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 23:02:57] 
[2025-11-22 23:02:57] 2025-11-22 21:55:06,315 | INFO     | ***************************************
[2025-11-22 23:02:57] 2025-11-22 21:55:06,818 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/0
[2025-11-22 23:02:57] 2025-11-22 21:55:06,833 | INFO     | sufficient remaining disk space (1669237571584 B)
[2025-11-22 23:02:57] 2025-11-22 21:55:06,834 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 23:02:57] 2025-11-22 21:55:06,834 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 23:02:57] 2025-11-22 21:55:06,834 | INFO     | update_server=False
[2025-11-22 23:02:57] 2025-11-22 21:55:06,834 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 23:02:57] 2025-11-22 21:55:06,834 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 23:02:57] 2025-11-22 21:55:06,873 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-22 23:02:57] 2025-11-22 21:55:06,873 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-22 23:02:57] 2025-11-22 21:55:06,873 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 23:02:57] 2025-11-22 21:55:06,874 | INFO     | will abort loop
[2025-11-22 23:02:57] 2025-11-22 21:55:07,344 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 23:02:57] 2025-11-22 21:55:07,534 | INFO     | all data control threads have been joined
[2025-11-22 23:02:57] 2025-11-22 21:55:07,838 | INFO     | [job] retrieve thread has finished
[2025-11-22 23:02:57] 2025-11-22 21:55:07,872 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 23:02:57] 2025-11-22 21:55:07,879 | INFO     | [job] job monitor thread has finished
[2025-11-22 23:02:57] 2025-11-22 21:55:07,936 | INFO     | all payload control threads have been joined
[2025-11-22 23:02:57] 2025-11-22 21:55:08,089 | INFO     | [job] validate thread has finished
[2025-11-22 23:02:57] 2025-11-22 21:55:08,131 | INFO     | all job control threads have been joined
[2025-11-22 23:02:57] 2025-11-22 21:55:08,192 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 23:02:57] 2025-11-22 21:55:08,193 | INFO     | [data] copytool_in thread has finished
[2025-11-22 23:02:57] 2025-11-22 21:55:08,392 | INFO     | [payload] failed_post thread has finished
[2025-11-22 23:02:57] 2025-11-22 21:55:08,539 | INFO     | [data] control thread has finished
[2025-11-22 23:02:57] 2025-11-22 21:55:08,853 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 23:02:57] 2025-11-22 21:55:08,942 | INFO     | [payload] control thread has finished
[2025-11-22 23:02:57] 2025-11-22 21:55:09,136 | INFO     | [job] control thread has finished
[2025-11-22 23:02:57] 2025-11-22 21:55:09,183 | INFO     | [payload] validate_post thread has finished
[2025-11-22 23:02:57] 2025-11-22 21:55:09,253 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 23:02:57] 2025-11-22 21:55:09,349 | INFO     | [data] copytool_out thread has finished
[2025-11-22 23:02:57] 2025-11-22 21:55:09,695 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 23:02:57] 2025-11-22 21:55:10,700 | INFO     | [job] queue monitor thread has finished
[2025-11-22 23:02:57] 2025-11-22 21:55:10,840 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 23:02:57] 2025-11-22 21:55:36,457 | INFO     | PID=2489195 has CPU usage=11.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-22 23:02:57] 2025-11-22 21:55:36,458 | INFO     | .. there are 2 such processes running
[2025-11-22 23:02:57] 2025-11-22 21:55:36,459 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 23:02:57] 2025-11-22 21:55:36,459 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 23:02:57] 2025-11-22 21:55:36,459 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 23:02:57] 2025-11-22 21:55:47,103 | INFO     | [monitor] cgroup control has ended
[2025-11-22 23:02:57] 2025-11-22 21:55:48,338 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22589590558528)>', '<ExcThread(monitor, started 22589344794368)>']
[2025-11-22 23:02:57] 2025-11-22 21:55:48,512 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 23:02:57] 2025-11-22 21:55:48,512 | INFO     | [monitor] control thread has ended
[2025-11-22 23:02:57] 2025-11-22 21:55:53,353 | INFO     | all workflow threads have been joined
[2025-11-22 23:02:57] 2025-11-22 21:55:53,353 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 23:02:57] 2025-11-22 21:55:53,353 | INFO     | traces error code: 0
[2025-11-22 23:02:57] 2025-11-22 21:55:53,354 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 23:02:57] 2025-11-22 21:55:53,471 [wrapper] ==== pilot stdout END ====
[2025-11-22 23:02:57] 2025-11-22 21:55:53,473 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 23:02:57] 2025-11-22 21:55:53,475 [wrapper] pilotpid: 2489195
[2025-11-22 23:02:57] 2025-11-22 21:55:53,477 [wrapper] Pilot exit status: 0
[2025-11-22 23:02:57] 2025-11-22 21:55:53,487 [wrapper] pandaids: 6893848273
[2025-11-22 23:02:57] 2025-11-22 21:55:53,545 [wrapper] cleanup supervisor_pilot 3213347 2489196
[2025-11-22 23:02:57] 2025-11-22 21:55:53,548 [wrapper] Test setup, not cleaning
[2025-11-22 23:02:57] 2025-11-22 21:55:53,550 [wrapper] apfmon messages muted
[2025-11-22 23:02:57] 2025-11-22 21:55:53,552 [wrapper] ==== wrapper stdout END ====
[2025-11-22 23:02:57] 2025-11-22 21:55:53,554 [wrapper] ==== wrapper stderr END ====
[2025-11-22 23:02:57]  *** Error codes and diagnostics ***
[2025-11-22 23:02:57]     "exeErrorCode": 0,
[2025-11-22 23:02:57]     "exeErrorDiag": "",
[2025-11-22 23:02:57]     "pilotErrorCode": 0,
[2025-11-22 23:02:57]     "pilotErrorDiag": "",
[2025-11-22 23:02:57]  *** Listing of results directory ***
[2025-11-22 23:02:57] total 1343832
[2025-11-22 23:02:57] -rw-r--r-- 1 boinc boinc    576529 Nov 20 11:06 pilot3.tar.gz
[2025-11-22 23:02:57] -rw-r--r-- 1 boinc boinc      5112 Nov 20 11:32 queuedata.json
[2025-11-22 23:02:57] -rwx------ 1 boinc boinc     36292 Nov 20 11:32 runpilot2-wrapper.sh
[2025-11-22 23:02:57] -rw-r--r-- 1 boinc boinc       100 Nov 22 01:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 23:02:57] -rwxr-xr-x 1 boinc boinc      7986 Nov 22 01:42 run_atlas
[2025-11-22 23:02:57] -rw-r--r-- 1 boinc boinc       105 Nov 22 01:42 job.xml
[2025-11-22 23:02:57] -rw-r--r-- 2 boinc boinc 411129185 Nov 22 01:42 EVNT.47493127._000262.pool.root.1
[2025-11-22 23:02:57] -rw-r--r-- 1 boinc boinc      6419 Nov 22 01:42 init_data.xml
[2025-11-22 23:02:57] -rw-r--r-- 2 boinc boinc     15847 Nov 22 01:42 start_atlas.sh
[2025-11-22 23:02:57] drwxrwx--x 2 boinc boinc      4096 Nov 22 01:42 shared
[2025-11-22 23:02:57] -rw-r--r-- 2 boinc boinc    590101 Nov 22 01:42 input.tar.gz
[2025-11-22 23:02:57] -rw-r--r-- 1 boinc boinc         0 Nov 22 01:42 boinc_lockfile
[2025-11-22 23:02:57] -rw-r--r-- 1 boinc boinc      2786 Nov 22 01:42 pandaJob.out
[2025-11-22 23:02:57] -rw------- 1 boinc boinc    989798 Nov 22 01:42 agis_schedconf.cvmfs.json
[2025-11-22 23:02:57] drwx------ 5 boinc boinc      4096 Nov 22 01:42 pilot3
[2025-11-22 23:02:57] -rw-r--r-- 1 boinc boinc       531 Nov 22 22:48 boinc_task_state.xml
[2025-11-22 23:02:57] -rw------- 1 boinc boinc 935700752 Nov 22 22:54 HITS.47523449._002614.pool.root.1
[2025-11-22 23:02:57] -rw------- 1 boinc boinc      1044 Nov 22 22:54 memory_monitor_summary.json
[2025-11-22 23:02:57] -rw------- 1 boinc boinc   1526164 Nov 22 22:54 agis_ddmendpoints.agis.ALL.json
[2025-11-22 23:02:57] -rw------- 1 boinc boinc   1920242 Nov 22 22:54 log.47523449._002614.job.log.tgz.1
[2025-11-22 23:02:57] -rw------- 1 boinc boinc      8629 Nov 22 22:55 heartbeat.json
[2025-11-22 23:02:57] -rw------- 1 boinc boinc        95 Nov 22 22:55 pilot_heartbeat.json
[2025-11-22 23:02:57] -rw------- 1 boinc boinc      5021 Nov 22 22:55 pilotlog.txt
[2025-11-22 23:02:57] -rw------- 1 boinc boinc  10742733 Nov 22 22:55 log.47523449._002614.job.log.1
[2025-11-22 23:02:57] -rw------- 1 boinc boinc       353 Nov 22 22:55 output.list
[2025-11-22 23:02:57] -rw-r--r-- 1 boinc boinc       620 Nov 22 22:55 runtime_log
[2025-11-22 23:02:57] -rw------- 1 boinc boinc  12687360 Nov 22 22:55 result.tar.gz
[2025-11-22 23:02:57] -rw-r--r-- 1 boinc boinc      9206 Nov 22 22:55 runtime_log.err
[2025-11-22 23:02:57] -rw------- 1 boinc boinc       671 Nov 22 22:55 PEeLDmn8Gg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmXVHKDm3Wg5Po.diag
[2025-11-22 23:02:57] -rw-r--r-- 1 boinc boinc        28 Nov 22 23:02 wrapper_checkpoint.txt
[2025-11-22 23:02:57] -rw-r--r-- 1 boinc boinc      8192 Nov 22 23:02 boinc_mmap_file
[2025-11-22 23:02:57] -rw-r--r-- 1 boinc boinc     21084 Nov 22 23:02 stderr.txt
[2025-11-22 23:02:57] HITS file was successfully produced:
[2025-11-22 23:02:57] -rw------- 1 boinc boinc 935700752 Nov 22 22:54 shared/HITS.pool.root.1
[2025-11-22 23:02:57]  *** Contents of shared directory: ***
[2025-11-22 23:02:57] total 1328264
[2025-11-22 23:02:57] -rw-r--r-- 2 boinc boinc 411129185 Nov 22 01:42 ATLAS.root_0
[2025-11-22 23:02:57] -rw-r--r-- 2 boinc boinc     15847 Nov 22 01:42 start_atlas.sh
[2025-11-22 23:02:57] -rw-r--r-- 2 boinc boinc    590101 Nov 22 01:42 input.tar.gz
[2025-11-22 23:02:57] -rw------- 1 boinc boinc 935700752 Nov 22 22:54 HITS.pool.root.1
[2025-11-22 23:02:57] -rw------- 1 boinc boinc  12687360 Nov 22 22:55 result.tar.gz
23:02:59 (2485211): run_atlas exited; CPU time 305104.355258
23:02:59 (2485211): called boinc_finish(0)

</stderr_txt>
]]>

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