Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
20:22:13 (1818813): wrapper (7.7.26015): starting
20:22:13 (1818813): wrapper: running run_atlas (--nthreads 4)
[2025-11-25 20:22:13] Arguments: --nthreads 4
[2025-11-25 20:22:13] Threads: 4
[2025-11-25 20:22:13] Checking for CVMFS
[2025-11-25 20:22:13] No cvmfs_config command found, will try listing directly
[2025-11-25 20:22:13] CVMFS is ok
[2025-11-25 20:22:13] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 20:22:13] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 20:22:13] Further information can be found at the LHC@home message board.
[2025-11-25 20:22:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 20:22:13] Checking for apptainer binary...
[2025-11-25 20:22:13] which: no apptainer in ((null))
[2025-11-25 20:22:13] apptainer is not installed, using version from CVMFS
[2025-11-25 20:22:13] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 20:22:14] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot36/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut28.grid.cesnet.cz
[2025-11-25 20:22:14] apptainer works
[2025-11-25 20:22:14] Set ATHENA_PROC_NUMBER=4
[2025-11-25 20:22:14] Set ATHENA_CORE_NUMBER=4
[2025-11-25 20:22:14] Starting ATLAS job with PandaID=6893848382
[2025-11-25 20:22:14] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot36/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 00:24:42]  *** The last 200 lines of the pilot log: ***
[2025-11-27 00:24:42] 2025-11-26 23:23:44,765 | INFO     | time since job start (100878s) is within the limit (172800.0s)
[2025-11-27 00:24:42] 2025-11-26 23:23:45,144 | INFO     | monitor loop #6984: job 0:6893848382 is in state 'finished'
[2025-11-27 00:24:42] 2025-11-26 23:23:45,144 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 00:24:42] 2025-11-26 23:23:45,408 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 00:24:42] 2025-11-26 23:23:45,417 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2604.069525
[2025-11-27 00:24:42] 2025-11-26 23:23:45,426 | INFO     | using path: /scratch/boinc/var/slot36/slots/0/PanDA_Pilot-6893848382/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 00:24:42] 2025-11-26 23:23:45,427 | INFO     | extracted standard info from prmon json
[2025-11-27 00:24:42] 2025-11-26 23:23:45,427 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 00:24:42] 2025-11-26 23:23:45,428 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 00:24:42] 2025-11-26 23:23:45,462 | INFO     | fitting pss+swap vs Time
[2025-11-27 00:24:42] 2025-11-26 23:23:45,464 | INFO     | sum of square deviations: 1403062355776.4988
[2025-11-27 00:24:42] 2025-11-26 23:23:45,539 | INFO     | sum of deviations: 3167977867254.296
[2025-11-27 00:24:42] 2025-11-26 23:23:45,540 | INFO     | mean x: 1764148990.8415961
[2025-11-27 00:24:42] 2025-11-26 23:23:45,540 | INFO     | mean y: 2307929.2950423216
[2025-11-27 00:24:42] 2025-11-26 23:23:45,540 | INFO     | intersect: -3980968319.6298804
[2025-11-27 00:24:42] 2025-11-26 23:23:45,543 | INFO     | chi2: 4.696434368292184
[2025-11-27 00:24:42] 2025-11-26 23:23:45,545 | INFO     | sum of square deviations: 1390376457683.4133
[2025-11-27 00:24:42] 2025-11-26 23:23:45,620 | INFO     | sum of deviations: 3580755815932.4204
[2025-11-27 00:24:42] 2025-11-26 23:23:45,621 | INFO     | mean x: 1764148838.3426318
[2025-11-27 00:24:42] 2025-11-26 23:23:45,621 | INFO     | mean y: 2312891.0594299575
[2025-11-27 00:24:42] 2025-11-26 23:23:45,621 | INFO     | intersect: -4541051014.562863
[2025-11-27 00:24:42] 2025-11-26 23:23:45,624 | INFO     | chi2: 2.0013482228652775
[2025-11-27 00:24:42] 2025-11-26 23:23:45,624 | INFO     | current chi2=2.0013482228652775 (change=57.385793861459845 %)
[2025-11-27 00:24:42] 2025-11-26 23:23:45,626 | INFO     | sum of square deviations: 1377767258702.8228
[2025-11-27 00:24:42] 2025-11-26 23:23:45,703 | INFO     | sum of deviations: 3583446799730.1826
[2025-11-27 00:24:42] 2025-11-26 23:23:45,703 | INFO     | mean x: 1764148685.843674
[2025-11-27 00:24:42] 2025-11-26 23:23:45,704 | INFO     | mean y: 2312923.2341849147
[2025-11-27 00:24:42] 2025-11-26 23:23:45,704 | INFO     | intersect: -4586076677.8415985
[2025-11-27 00:24:42] 2025-11-26 23:23:45,706 | INFO     | chi2: 1.9801715008388265
[2025-11-27 00:24:42] 2025-11-26 23:23:45,706 | INFO     | current chi2=1.9801715008388265 (change=1.0581228086401067 %)
[2025-11-27 00:24:42] 2025-11-26 23:23:45,707 | INFO     | right removable region: 1643
[2025-11-27 00:24:42] 2025-11-26 23:23:45,709 | INFO     | sum of square deviations: 1390376213683.0967
[2025-11-27 00:24:42] 2025-11-26 23:23:45,779 | INFO     | sum of deviations: 2864765718719.2285
[2025-11-27 00:24:42] 2025-11-26 23:23:45,780 | INFO     | mean x: 1764149143.3420255
[2025-11-27 00:24:42] 2025-11-26 23:23:45,780 | INFO     | mean y: 2311570.5421467554
[2025-11-27 00:24:42] 2025-11-26 23:23:45,780 | INFO     | intersect: -3632585185.3268657
[2025-11-27 00:24:42] 2025-11-26 23:23:45,782 | INFO     | chi2: 2.9326062353784335
[2025-11-27 00:24:42] 2025-11-26 23:23:45,782 | INFO     | current chi2=2.9326062353784335 (change=37.55675038966106 %)
[2025-11-27 00:24:42] 2025-11-26 23:23:45,785 | INFO     | sum of square deviations: 1377766771190.1968
[2025-11-27 00:24:42] 2025-11-26 23:23:45,853 | INFO     | sum of deviations: 2827095859466.798
[2025-11-27 00:24:42] 2025-11-26 23:23:45,853 | INFO     | mean x: 1764149295.8424575
[2025-11-27 00:24:42] 2025-11-26 23:23:45,853 | INFO     | mean y: 2312025.9914841847
[2025-11-27 00:24:42] 2025-11-26 23:23:45,853 | INFO     | intersect: -3617617902.6778283
[2025-11-27 00:24:42] 2025-11-26 23:23:45,855 | INFO     | chi2: 2.930326461181798
[2025-11-27 00:24:42] 2025-11-26 23:23:45,856 | INFO     | current chi2=2.930326461181798 (change=0.07773884434714083 %)
[2025-11-27 00:24:42] 2025-11-26 23:23:45,856 | INFO     | left removable region: 20
[2025-11-27 00:24:42] 2025-11-26 23:23:45,858 | INFO     | sum of square deviations: 1325639950747.0864
[2025-11-27 00:24:42] 2025-11-26 23:23:45,924 | INFO     | sum of deviations: 3208844480973.2207
[2025-11-27 00:24:42] 2025-11-26 23:23:45,924 | INFO     | mean x: 1764149265.3456562
[2025-11-27 00:24:42] 2025-11-26 23:23:45,924 | INFO     | mean y: 2317367.988909427
[2025-11-27 00:24:42] 2025-11-26 23:23:45,925 | INFO     | intersect: -4267982897.5749693
[2025-11-27 00:24:42] 2025-11-26 23:23:45,927 | INFO     | chi2: 0.19606747550132037
[2025-11-27 00:24:42] 2025-11-26 23:23:45,927 | INFO     | current memory leak: 2.42 B/s (using 1623 data points, chi2=0.20)
[2025-11-27 00:24:42] 2025-11-26 23:23:45,928 | INFO     | could have reported an average CPU frequency of 2589 MHz (59 samples)
[2025-11-27 00:24:42] 2025-11-26 23:23:45,929 | INFO     | ..............................
[2025-11-27 00:24:42] 2025-11-26 23:23:45,929 | INFO     | . Timing measurements:
[2025-11-27 00:24:42] 2025-11-26 23:23:45,929 | INFO     | . get job = 0 s
[2025-11-27 00:24:42] 2025-11-26 23:23:45,929 | INFO     | . initial setup = 1 s
[2025-11-27 00:24:42] 2025-11-26 23:23:45,929 | INFO     | . payload setup = 6 s
[2025-11-27 00:24:42] 2025-11-26 23:23:45,929 | INFO     | . stage-in = 0 s
[2025-11-27 00:24:42] 2025-11-26 23:23:45,929 | INFO     | . payload execution = 100840 s
[2025-11-27 00:24:42] 2025-11-26 23:23:45,930 | INFO     | . stage-out = 2 s
[2025-11-27 00:24:42] 2025-11-26 23:23:45,930 | INFO     | . log creation = 0 s
[2025-11-27 00:24:42] 2025-11-26 23:23:45,930 | INFO     | ..............................
[2025-11-27 00:24:42] 2025-11-26 23:23:46,040 | INFO     | 
[2025-11-27 00:24:42] 2025-11-26 23:23:46,041 | INFO     | job summary report
[2025-11-27 00:24:42] 2025-11-26 23:23:46,041 | INFO     | --------------------------------------------------
[2025-11-27 00:24:42] 2025-11-26 23:23:46,041 | INFO     | PanDA job id: 6893848382
[2025-11-27 00:24:42] 2025-11-26 23:23:46,041 | INFO     | task id: 47523449
[2025-11-27 00:24:42] 2025-11-26 23:23:46,041 | INFO     | errors: (none)
[2025-11-27 00:24:42] 2025-11-26 23:23:46,041 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 00:24:42] 2025-11-26 23:23:46,041 | INFO     | pilot state: finished 
[2025-11-27 00:24:42] 2025-11-26 23:23:46,041 | INFO     | transexitcode: 0
[2025-11-27 00:24:42] 2025-11-26 23:23:46,041 | INFO     | exeerrorcode: 0
[2025-11-27 00:24:42] 2025-11-26 23:23:46,041 | INFO     | exeerrordiag: 
[2025-11-27 00:24:42] 2025-11-26 23:23:46,042 | INFO     | exitcode: 0
[2025-11-27 00:24:42] 2025-11-26 23:23:46,042 | INFO     | exitmsg: OK
[2025-11-27 00:24:42] 2025-11-26 23:23:46,042 | INFO     | cpuconsumptiontime: 338279 s
[2025-11-27 00:24:42] 2025-11-26 23:23:46,042 | INFO     | nevents: 1000
[2025-11-27 00:24:42] 2025-11-26 23:23:46,042 | INFO     | neventsw: 0
[2025-11-27 00:24:42] 2025-11-26 23:23:46,042 | INFO     | pid: 1829988
[2025-11-27 00:24:42] 2025-11-26 23:23:46,042 | INFO     | pgrp: 1829988
[2025-11-27 00:24:42] 2025-11-26 23:23:46,042 | INFO     | corecount: 4
[2025-11-27 00:24:42] 2025-11-26 23:23:46,042 | INFO     | event service: False
[2025-11-27 00:24:42] 2025-11-26 23:23:46,042 | INFO     | sizes: {0: 2284042, 1: 2284297, 5: 2284559, 12: 2284615, 100850: 2358398, 100854: 2367414, 100857: 2367598, 100864: 2367844}
[2025-11-27 00:24:42] 2025-11-26 23:23:46,043 | INFO     | --------------------------------------------------
[2025-11-27 00:24:42] 2025-11-26 23:23:46,043 | INFO     | 
[2025-11-27 00:24:42] 2025-11-26 23:23:46,043 | INFO     | executing command: ls -lF /scratch/boinc/var/slot36/slots/0
[2025-11-27 00:24:42] 2025-11-26 23:23:46,062 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 00:24:42] 2025-11-26 23:23:46,063 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 00:24:42] 2025-11-26 23:23:46,063 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 00:24:42] 2025-11-26 23:23:46,063 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 00:24:42] 2025-11-26 23:23:46,063 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 00:24:42] 2025-11-26 23:23:46,063 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 00:24:42] 2025-11-26 23:23:46,064 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 00:24:42] 2025-11-26 23:23:46,064 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 00:24:42] 2025-11-26 23:23:46,064 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 00:24:42] 2025-11-26 23:23:46,064 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 00:24:42] 2025-11-26 23:23:46,064 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 00:24:42] 2025-11-26 23:23:46,064 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 00:24:42] 2025-11-26 23:23:46,064 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 00:24:42] 2025-11-26 23:23:46,065 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 00:24:42] 2025-11-26 23:23:46,065 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 00:24:42] 2025-11-26 23:23:46,065 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 00:24:42] 2025-11-26 23:23:46,065 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 00:24:42] 2025-11-26 23:23:46,065 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 00:24:42] 2025-11-26 23:23:46,065 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 00:24:42] 2025-11-26 23:23:46,065 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 00:24:42] 2025-11-26 23:23:46,066 | INFO     | job 6893848382 has completed (purged errors)
[2025-11-27 00:24:42] 2025-11-26 23:23:46,066 | INFO     | overall cleanup function is called
[2025-11-27 00:24:42] 2025-11-26 23:23:47,080 | INFO     | --- collectZombieJob: --- 10, [1829988]
[2025-11-27 00:24:42] 2025-11-26 23:23:47,081 | INFO     | zombie collector waiting for pid 1829988
[2025-11-27 00:24:42] 2025-11-26 23:23:47,081 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 00:24:42] 2025-11-26 23:23:47,081 | INFO     | collected zombie processes
[2025-11-27 00:24:42] 2025-11-26 23:23:47,081 | INFO     | will attempt to kill all subprocesses of pid=1829988
[2025-11-27 00:24:42] 2025-11-26 23:23:47,419 | INFO     | process IDs to be killed: [1829988] (in reverse order)
[2025-11-27 00:24:42] 2025-11-26 23:23:47,505 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 00:24:42] 2025-11-26 23:23:47,506 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 00:24:42] 2025-11-26 23:23:47,516 | INFO     | did not find any defunct processes belonging to 1829988
[2025-11-27 00:24:42] 2025-11-26 23:23:47,526 | INFO     | did not find any defunct processes belonging to 1829988
[2025-11-27 00:24:42] 2025-11-26 23:23:47,527 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 00:24:42] 2025-11-26 23:23:47,527 | INFO     | ready for new job
[2025-11-27 00:24:42] 2025-11-26 23:23:47,528 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 00:24:42] 2025-11-26 23:23:47,538 | INFO     | ***************************************
[2025-11-27 00:24:42] 2025-11-26 23:23:47,538 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 00:24:42] 2025-11-26 23:23:47,538 | INFO     | ***************************************
[2025-11-27 00:24:42] 2025-11-26 23:23:47,538 | INFO     | 
[2025-11-27 00:24:42] 2025-11-26 23:23:47,542 | INFO     | architecture information:
[2025-11-27 00:24:42] 2025-11-26 23:23:47,543 | INFO     | executing command: cat /etc/os-release
[2025-11-27 00:24:42] 2025-11-26 23:23:47,559 | INFO     | cat /etc/os-release:
[2025-11-27 00:24:42] NAME="CentOS Linux"
[2025-11-27 00:24:42] VERSION="7 (Core)"
[2025-11-27 00:24:42] ID="centos"
[2025-11-27 00:24:42] ID_LIKE="rhel fedora"
[2025-11-27 00:24:42] VERSION_ID="7"
[2025-11-27 00:24:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 00:24:42] ANSI_COLOR="0;31"
[2025-11-27 00:24:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 00:24:42] HOME_URL="https://www.centos.org/"
[2025-11-27 00:24:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 00:24:42] 
[2025-11-27 00:24:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 00:24:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 00:24:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 00:24:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 00:24:42] 
[2025-11-27 00:24:42] 2025-11-26 23:23:47,560 | INFO     | ***************************************
[2025-11-27 00:24:42] 2025-11-26 23:23:48,063 | INFO     | executing command: df -mP /scratch/boinc/var/slot36/slots/0
[2025-11-27 00:24:42] 2025-11-26 23:23:48,078 | INFO     | sufficient remaining disk space (1666314141696 B)
[2025-11-27 00:24:42] 2025-11-26 23:23:48,078 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 00:24:42] 2025-11-26 23:23:48,078 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 00:24:42] 2025-11-26 23:23:48,078 | INFO     | update_server=False
[2025-11-27 00:24:42] 2025-11-26 23:23:48,079 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 00:24:42] 2025-11-26 23:23:48,328 | INFO     | all data control threads have been joined
[2025-11-27 00:24:42] 2025-11-26 23:23:48,651 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 00:24:42] 2025-11-26 23:23:48,651 | INFO     | aborting loop
[2025-11-27 00:24:42] 2025-11-26 23:23:48,748 | INFO     | all payload control threads have been joined
[2025-11-27 00:24:42] 2025-11-26 23:23:49,084 | INFO     | [job] retrieve thread has finished
[2025-11-27 00:24:42] 2025-11-26 23:23:49,199 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 00:24:42] 2025-11-26 23:23:49,241 | INFO     | [payload] validate_post thread has finished
[2025-11-27 00:24:42] 2025-11-26 23:23:49,333 | INFO     | [data] control thread has finished
[2025-11-27 00:24:42] 2025-11-26 23:23:49,411 | INFO     | all job control threads have been joined
[2025-11-27 00:24:42] 2025-11-26 23:23:49,515 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 00:24:42] 2025-11-26 23:23:49,593 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 00:24:42] 2025-11-26 23:23:49,613 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 00:24:42] 2025-11-26 23:23:49,641 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 00:24:42] 2025-11-26 23:23:49,656 | INFO     | [job] job monitor thread has finished
[2025-11-27 00:24:42] 2025-11-26 23:23:49,753 | INFO     | [payload] control thread has finished
[2025-11-27 00:24:42] 2025-11-26 23:23:49,769 | INFO     | [data] copytool_in thread has finished
[2025-11-27 00:24:42] 2025-11-26 23:23:49,876 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 00:24:42] 2025-11-26 23:23:50,047 | INFO     | [payload] failed_post thread has finished
[2025-11-27 00:24:42] 2025-11-26 23:23:50,256 | INFO     | [job] validate thread has finished
[2025-11-27 00:24:42] 2025-11-26 23:23:50,417 | INFO     | [job] control thread has finished
[2025-11-27 00:24:42] 2025-11-26 23:23:51,051 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 00:24:42] 2025-11-26 23:23:51,204 | INFO     | [data] copytool_out thread has finished
[2025-11-27 00:24:42] 2025-11-26 23:23:52,056 | INFO     | [job] queue monitor thread has finished
[2025-11-27 00:24:42] 2025-11-26 23:23:53,598 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 00:24:42] 2025-11-26 23:24:17,398 | INFO     | [monitor] cgroup control has ended
[2025-11-27 00:24:42] 2025-11-26 23:24:18,286 | INFO     | PID=1822859 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 00:24:42] 2025-11-26 23:24:18,286 | INFO     | .. there are 2 such processes running
[2025-11-27 00:24:42] 2025-11-26 23:24:18,286 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 00:24:42] 2025-11-26 23:24:18,286 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 00:24:42] 2025-11-26 23:24:18,286 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 00:24:42] 2025-11-26 23:24:19,054 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23292377925440)>', '<ExcThread(monitor, started 23291930580736)>']
[2025-11-27 00:24:42] 2025-11-26 23:24:19,291 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 00:24:42] 2025-11-26 23:24:19,291 | INFO     | [monitor] control thread has ended
[2025-11-27 00:24:42] 2025-11-26 23:24:24,079 | INFO     | all workflow threads have been joined
[2025-11-27 00:24:42] 2025-11-26 23:24:24,079 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 00:24:42] 2025-11-26 23:24:24,079 | INFO     | traces error code: 0
[2025-11-27 00:24:42] 2025-11-26 23:24:24,080 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 00:24:42] 2025-11-26 23:24:24,196 [wrapper] ==== pilot stdout END ====
[2025-11-27 00:24:42] 2025-11-26 23:24:24,199 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 00:24:42] 2025-11-26 23:24:24,201 [wrapper] pilotpid: 1822859
[2025-11-27 00:24:42] 2025-11-26 23:24:24,204 [wrapper] Pilot exit status: 0
[2025-11-27 00:24:42] 2025-11-26 23:24:24,219 [wrapper] pandaids: 6893848382
[2025-11-27 00:24:42] 2025-11-26 23:24:24,279 [wrapper] cleanup supervisor_pilot 2859812 1822860
[2025-11-27 00:24:42] 2025-11-26 23:24:24,282 [wrapper] Test setup, not cleaning
[2025-11-27 00:24:42] 2025-11-26 23:24:24,285 [wrapper] apfmon messages muted
[2025-11-27 00:24:42] 2025-11-26 23:24:24,287 [wrapper] ==== wrapper stdout END ====
[2025-11-27 00:24:42] 2025-11-26 23:24:24,289 [wrapper] ==== wrapper stderr END ====
[2025-11-27 00:24:42]  *** Error codes and diagnostics ***
[2025-11-27 00:24:42]     "exeErrorCode": 0,
[2025-11-27 00:24:42]     "exeErrorDiag": "",
[2025-11-27 00:24:42]     "pilotErrorCode": 0,
[2025-11-27 00:24:42]     "pilotErrorDiag": "",
[2025-11-27 00:24:42]  *** Listing of results directory ***
[2025-11-27 00:24:42] total 1345080
[2025-11-27 00:24:42] -rw-r--r-- 1 boinc boinc    576529 Nov 20 11:06 pilot3.tar.gz
[2025-11-27 00:24:42] -rw-r--r-- 1 boinc boinc      5112 Nov 20 11:30 queuedata.json
[2025-11-27 00:24:42] -rwx------ 1 boinc boinc     36292 Nov 20 11:31 runpilot2-wrapper.sh
[2025-11-27 00:24:42] -rw-r--r-- 1 boinc boinc       100 Nov 25 20:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 00:24:42] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 20:22 run_atlas
[2025-11-27 00:24:42] -rw-r--r-- 1 boinc boinc       105 Nov 25 20:22 job.xml
[2025-11-27 00:24:42] -rw-r--r-- 1 boinc boinc      6421 Nov 25 20:22 init_data.xml
[2025-11-27 00:24:42] -rw-r--r-- 2 boinc boinc 413856517 Nov 25 20:22 EVNT.47493127._000267.pool.root.1
[2025-11-27 00:24:42] -rw-r--r-- 2 boinc boinc     15847 Nov 25 20:22 start_atlas.sh
[2025-11-27 00:24:42] drwxrwx--x 2 boinc boinc      4096 Nov 25 20:22 shared
[2025-11-27 00:24:42] -rw-r--r-- 2 boinc boinc    590101 Nov 25 20:22 input.tar.gz
[2025-11-27 00:24:42] -rw-r--r-- 1 boinc boinc         0 Nov 25 20:22 boinc_lockfile
[2025-11-27 00:24:42] -rw-r--r-- 1 boinc boinc      2782 Nov 25 20:22 pandaJob.out
[2025-11-27 00:24:42] -rw------- 1 boinc boinc    991893 Nov 25 20:22 agis_schedconf.cvmfs.json
[2025-11-27 00:24:42] drwx------ 5 boinc boinc      4096 Nov 25 20:22 pilot3
[2025-11-27 00:24:42] -rw-r--r-- 1 boinc boinc       532 Nov 27 00:16 boinc_task_state.xml
[2025-11-27 00:24:42] -rw------- 1 boinc boinc 927239201 Nov 27 00:22 HITS.47523449._002661.pool.root.1
[2025-11-27 00:24:42] -rw------- 1 boinc boinc      1050 Nov 27 00:23 memory_monitor_summary.json
[2025-11-27 00:24:42] -rw------- 1 boinc boinc        95 Nov 27 00:23 pilot_heartbeat.json
[2025-11-27 00:24:42] -rw------- 1 boinc boinc   1516240 Nov 27 00:23 agis_ddmendpoints.agis.ALL.json
[2025-11-27 00:24:42] -rw------- 1 boinc boinc   2222224 Nov 27 00:23 log.47523449._002661.job.log.tgz.1
[2025-11-27 00:24:42] -rw------- 1 boinc boinc      8631 Nov 27 00:23 heartbeat.json
[2025-11-27 00:24:42] -rw------- 1 boinc boinc      4834 Nov 27 00:24 pilotlog.txt
[2025-11-27 00:24:42] -rw------- 1 boinc boinc  13951473 Nov 27 00:24 log.47523449._002661.job.log.1
[2025-11-27 00:24:42] -rw------- 1 boinc boinc       353 Nov 27 00:24 output.list
[2025-11-27 00:24:42] -rw-r--r-- 1 boinc boinc       620 Nov 27 00:24 runtime_log
[2025-11-27 00:24:42] -rw------- 1 boinc boinc  16189440 Nov 27 00:24 result.tar.gz
[2025-11-27 00:24:42] -rw-r--r-- 1 boinc boinc      9207 Nov 27 00:24 runtime_log.err
[2025-11-27 00:24:42] -rw------- 1 boinc boinc       675 Nov 27 00:24 NHzNDmk7Gg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmiUHKDmmUjAxm.diag
[2025-11-27 00:24:42] -rw-r--r-- 1 boinc boinc        28 Nov 27 00:24 wrapper_checkpoint.txt
[2025-11-27 00:24:42] -rw-r--r-- 1 boinc boinc      8192 Nov 27 00:24 boinc_mmap_file
[2025-11-27 00:24:42] -rw-r--r-- 1 boinc boinc     21140 Nov 27 00:24 stderr.txt
[2025-11-27 00:24:42] HITS file was successfully produced:
[2025-11-27 00:24:42] -rw------- 1 boinc boinc 927239201 Nov 27 00:22 shared/HITS.pool.root.1
[2025-11-27 00:24:42]  *** Contents of shared directory: ***
[2025-11-27 00:24:42] total 1326084
[2025-11-27 00:24:42] -rw-r--r-- 2 boinc boinc 413856517 Nov 25 20:22 ATLAS.root_0
[2025-11-27 00:24:42] -rw-r--r-- 2 boinc boinc     15847 Nov 25 20:22 start_atlas.sh
[2025-11-27 00:24:42] -rw-r--r-- 2 boinc boinc    590101 Nov 25 20:22 input.tar.gz
[2025-11-27 00:24:42] -rw------- 1 boinc boinc 927239201 Nov 27 00:22 HITS.pool.root.1
[2025-11-27 00:24:42] -rw------- 1 boinc boinc  16189440 Nov 27 00:24 result.tar.gz
00:24:44 (1818813): run_atlas exited; CPU time 342032.190500
00:24:44 (1818813): called boinc_finish(0)

</stderr_txt>
]]>

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