Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:27:20 (25759): wrapper (7.7.26015): starting
01:27:20 (25759): wrapper: running run_atlas (--nthreads 8)
[2025-11-24 01:27:20] Arguments: --nthreads 8
[2025-11-24 01:27:20] Threads: 8
[2025-11-24 01:27:20] Checking for CVMFS
[2025-11-24 01:27:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-24 01:27:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-24 01:27:21] Running cvmfs_config stat atlas.cern.ch
[2025-11-24 01:27:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-24 01:27:22] 2.11.2.0 6428 281595 139516 153227 2 84 22128209 25165825 4632 130560 3 139885179 99.875 83716509 3234 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-11-24 01:27:22] CVMFS is ok
[2025-11-24 01:27:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 01:27:23] Checking for apptainer binary...
[2025-11-24 01:27:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-24 01:27:23] Running /usr/bin/apptainer --version
[2025-11-24 01:27:23] apptainer version 1.3.2-1.el7
[2025-11-24 01:27:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 01:27:47] cg-vwn335.simple-grid.lan
[2025-11-24 01:27:47] apptainer works
[2025-11-24 01:27:47] Set ATHENA_PROC_NUMBER=8
[2025-11-24 01:27:47] Set ATHENA_CORE_NUMBER=8
[2025-11-24 01:27:47] Starting ATLAS job with PandaID=6893860973
[2025-11-24 01:27:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 22:24:50]  *** The last 200 lines of the pilot log: ***
[2025-11-24 22:24:50] 2025-11-24 21:23:50,555 | INFO     | time since job start (75139s) is within the limit (172800.0s)
[2025-11-24 22:24:50] 2025-11-24 21:23:51,905 | INFO     | monitor loop #5097: job 0:6893860973 is in state 'finished'
[2025-11-24 22:24:50] 2025-11-24 21:23:51,906 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 22:24:50] 2025-11-24 21:23:52,561 | INFO     | time since job start (75141s) is within the limit (172800.0s)
[2025-11-24 22:24:50] 2025-11-24 21:23:54,413 | INFO     | monitor loop #5098: job 0:6893860973 is in state 'finished'
[2025-11-24 22:24:50] 2025-11-24 21:23:54,414 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 22:24:50] 2025-11-24 21:23:54,571 | INFO     | time since job start (75143s) is within the limit (172800.0s)
[2025-11-24 22:24:50] 2025-11-24 21:23:55,739 | INFO     | PID=29543 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 22:24:50] 2025-11-24 21:23:55,739 | INFO     | .. there are 2 such processes running
[2025-11-24 22:24:50] 2025-11-24 21:23:56,742 | INFO     | time since job start (75145s) is within the limit (172800.0s)
[2025-11-24 22:24:50] 2025-11-24 21:23:56,919 | INFO     | monitor loop #5099: job 0:6893860973 is in state 'finished'
[2025-11-24 22:24:50] 2025-11-24 21:23:56,920 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 22:24:50] 2025-11-24 21:23:58,751 | INFO     | time since job start (75147s) is within the limit (172800.0s)
[2025-11-24 22:24:50] 2025-11-24 21:23:59,426 | INFO     | monitor loop #5100: job 0:6893860973 is in state 'finished'
[2025-11-24 22:24:50] 2025-11-24 21:23:59,427 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 22:24:50] 2025-11-24 21:24:00,761 | INFO     | time since job start (75149s) is within the limit (172800.0s)
[2025-11-24 22:24:50] 2025-11-24 21:24:01,154 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 22:24:50] 2025-11-24 21:24:01,155 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-11-24 22:24:50] 2025-11-24 21:24:01,157 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6893860973/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 22:24:50] 2025-11-24 21:24:01,158 | INFO     | extracted standard info from prmon json
[2025-11-24 22:24:50] 2025-11-24 21:24:01,158 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 22:24:50] 2025-11-24 21:24:01,158 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 22:24:50] 2025-11-24 21:24:01,183 | INFO     | fitting pss+swap vs Time
[2025-11-24 22:24:50] 2025-11-24 21:24:01,185 | INFO     | sum of square deviations: 564446994153.8824
[2025-11-24 22:24:50] 2025-11-24 21:24:01,240 | INFO     | sum of deviations: 2352541743900.3223
[2025-11-24 22:24:50] 2025-11-24 21:24:01,241 | INFO     | mean x: 1763982045.009828
[2025-11-24 22:24:50] 2025-11-24 21:24:01,241 | INFO     | mean y: 2793977.972972973
[2025-11-24 22:24:50] 2025-11-24 21:24:01,241 | INFO     | intersect: -7349254025.395306
[2025-11-24 22:24:50] 2025-11-24 21:24:01,242 | INFO     | chi2: 35.94623058564468
[2025-11-24 22:24:50] 2025-11-24 21:24:01,245 | INFO     | sum of square deviations: 557541454683.7623
[2025-11-24 22:24:50] 2025-11-24 21:24:01,313 | INFO     | sum of deviations: 2759400034118.927
[2025-11-24 22:24:50] 2025-11-24 21:24:01,314 | INFO     | mean x: 1763981892.5139802
[2025-11-24 22:24:50] 2025-11-24 21:24:01,314 | INFO     | mean y: 2802962.1217105263
[2025-11-24 22:24:50] 2025-11-24 21:24:01,314 | INFO     | intersect: -8727546419.96883
[2025-11-24 22:24:50] 2025-11-24 21:24:01,316 | INFO     | chi2: 32.42889426144663
[2025-11-24 22:24:50] 2025-11-24 21:24:01,316 | INFO     | current chi2=32.42889426144663 (change=9.784993494151555 %)
[2025-11-24 22:24:50] 2025-11-24 21:24:01,316 | INFO     | right removable region: 1215
[2025-11-24 22:24:50] 2025-11-24 21:24:01,318 | INFO     | sum of square deviations: 557540702553.7625
[2025-11-24 22:24:50] 2025-11-24 21:24:01,385 | INFO     | sum of deviations: 1840242929216.1333
[2025-11-24 22:24:50] 2025-11-24 21:24:01,386 | INFO     | mean x: 1763982197.5139802
[2025-11-24 22:24:50] 2025-11-24 21:24:01,386 | INFO     | mean y: 2805290.0509868423
[2025-11-24 22:24:50] 2025-11-24 21:24:01,386 | INFO     | intersect: -5819470557.020858
[2025-11-24 22:24:50] 2025-11-24 21:24:01,387 | INFO     | chi2: 31.0346903151263
[2025-11-24 22:24:50] 2025-11-24 21:24:01,388 | INFO     | current chi2=31.0346903151263 (change=13.663575263660125 %)
[2025-11-24 22:24:50] 2025-11-24 21:24:01,388 | INFO     | left removable region: 10
[2025-11-24 22:24:50] 2025-11-24 21:24:01,390 | INFO     | sum of square deviations: 542546524525.34924
[2025-11-24 22:24:50] 2025-11-24 21:24:01,448 | INFO     | sum of deviations: 1875388119761.753
[2025-11-24 22:24:50] 2025-11-24 21:24:01,449 | INFO     | mean x: 1763982167.0232365
[2025-11-24 22:24:50] 2025-11-24 21:24:01,449 | INFO     | mean y: 2826719.2232365147
[2025-11-24 22:24:50] 2025-11-24 21:24:01,449 | INFO     | intersect: -6094624927.713642
[2025-11-24 22:24:50] 2025-11-24 21:24:01,450 | INFO     | chi2: 22.777402229042995
[2025-11-24 22:24:50] 2025-11-24 21:24:01,451 | INFO     | current memory leak: 3.46 B/s (using 1205 data points, chi2=22.78)
[2025-11-24 22:24:50] 2025-11-24 21:24:01,452 | INFO     | could have reported an average CPU frequency of 1999 MHz (41 samples)
[2025-11-24 22:24:50] 2025-11-24 21:24:01,452 | INFO     | ..............................
[2025-11-24 22:24:50] 2025-11-24 21:24:01,453 | INFO     | . Timing measurements:
[2025-11-24 22:24:50] 2025-11-24 21:24:01,453 | INFO     | . get job = 0 s
[2025-11-24 22:24:50] 2025-11-24 21:24:01,453 | INFO     | . initial setup = 8 s
[2025-11-24 22:24:50] 2025-11-24 21:24:01,453 | INFO     | . payload setup = 180 s
[2025-11-24 22:24:50] 2025-11-24 21:24:01,453 | INFO     | . stage-in = 0 s
[2025-11-24 22:24:50] 2025-11-24 21:24:01,453 | INFO     | . payload execution = 74633 s
[2025-11-24 22:24:50] 2025-11-24 21:24:01,453 | INFO     | . stage-out = 5 s
[2025-11-24 22:24:50] 2025-11-24 21:24:01,453 | INFO     | . log creation = 2 s
[2025-11-24 22:24:50] 2025-11-24 21:24:01,453 | INFO     | ..............................
[2025-11-24 22:24:50] 2025-11-24 21:24:01,617 | INFO     | 
[2025-11-24 22:24:50] 2025-11-24 21:24:01,618 | INFO     | job summary report
[2025-11-24 22:24:50] 2025-11-24 21:24:01,618 | INFO     | --------------------------------------------------
[2025-11-24 22:24:50] 2025-11-24 21:24:01,618 | INFO     | PanDA job id: 6893860973
[2025-11-24 22:24:50] 2025-11-24 21:24:01,618 | INFO     | task id: 47523449
[2025-11-24 22:24:50] 2025-11-24 21:24:01,618 | INFO     | errors: (none)
[2025-11-24 22:24:50] 2025-11-24 21:24:01,618 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 22:24:50] 2025-11-24 21:24:01,618 | INFO     | pilot state: finished 
[2025-11-24 22:24:50] 2025-11-24 21:24:01,618 | INFO     | transexitcode: 0
[2025-11-24 22:24:50] 2025-11-24 21:24:01,618 | INFO     | exeerrorcode: 0
[2025-11-24 22:24:50] 2025-11-24 21:24:01,618 | INFO     | exeerrordiag: 
[2025-11-24 22:24:50] 2025-11-24 21:24:01,618 | INFO     | exitcode: 0
[2025-11-24 22:24:50] 2025-11-24 21:24:01,619 | INFO     | exitmsg: OK
[2025-11-24 22:24:50] 2025-11-24 21:24:01,619 | INFO     | cpuconsumptiontime: 339668 s
[2025-11-24 22:24:50] 2025-11-24 21:24:01,619 | INFO     | nevents: 1000
[2025-11-24 22:24:50] 2025-11-24 21:24:01,619 | INFO     | neventsw: 0
[2025-11-24 22:24:50] 2025-11-24 21:24:01,619 | INFO     | pid: 3751
[2025-11-24 22:24:50] 2025-11-24 21:24:01,619 | INFO     | pgrp: 3751
[2025-11-24 22:24:50] 2025-11-24 21:24:01,619 | INFO     | corecount: 8
[2025-11-24 22:24:50] 2025-11-24 21:24:01,619 | INFO     | event service: False
[2025-11-24 22:24:50] 2025-11-24 21:24:01,619 | INFO     | sizes: {0: 2298636, 1: 2298835, 12: 2298835, 23: 2298863, 33: 2298891, 44: 2298947, 55: 2299103, 66: 2299131, 76: 2299159, 87: 2299215, 98: 2299243, 100: 2299813, 
[2025-11-24 22:24:50] 2025-11-24 21:24:01,619 | INFO     | --------------------------------------------------
[2025-11-24 22:24:50] 2025-11-24 21:24:01,619 | INFO     | 
[2025-11-24 22:24:50] 2025-11-24 21:24:01,620 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-11-24 22:24:50] 2025-11-24 21:24:02,464 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 22:24:50] 2025-11-24 21:24:02,464 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 22:24:50] 2025-11-24 21:24:02,464 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 22:24:50] 2025-11-24 21:24:02,464 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 22:24:50] 2025-11-24 21:24:02,464 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 22:24:50] 2025-11-24 21:24:02,464 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 22:24:50] 2025-11-24 21:24:02,464 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 22:24:50] 2025-11-24 21:24:02,465 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 22:24:50] 2025-11-24 21:24:02,465 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 22:24:50] 2025-11-24 21:24:02,465 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 22:24:50] 2025-11-24 21:24:02,465 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 22:24:50] 2025-11-24 21:24:02,465 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 22:24:50] 2025-11-24 21:24:02,465 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 22:24:50] 2025-11-24 21:24:02,465 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 22:24:50] 2025-11-24 21:24:02,465 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 22:24:50] 2025-11-24 21:24:02,465 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 22:24:50] 2025-11-24 21:24:02,465 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 22:24:50] 2025-11-24 21:24:02,466 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 22:24:50] 2025-11-24 21:24:02,466 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 22:24:50] 2025-11-24 21:24:02,466 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 22:24:50] 2025-11-24 21:24:02,466 | INFO     | job 6893860973 has completed (purged errors)
[2025-11-24 22:24:50] 2025-11-24 21:24:02,466 | INFO     | overall cleanup function is called
[2025-11-24 22:24:50] 2025-11-24 21:24:03,483 | INFO     | --- collectZombieJob: --- 10, [3751]
[2025-11-24 22:24:50] 2025-11-24 21:24:03,484 | INFO     | zombie collector waiting for pid 3751
[2025-11-24 22:24:50] 2025-11-24 21:24:03,484 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 22:24:50] 2025-11-24 21:24:03,484 | INFO     | collected zombie processes
[2025-11-24 22:24:50] 2025-11-24 21:24:03,484 | INFO     | will attempt to kill all subprocesses of pid=3751
[2025-11-24 22:24:50] 2025-11-24 21:24:03,553 | INFO     | process IDs to be killed: [3751] (in reverse order)
[2025-11-24 22:24:50] 2025-11-24 21:24:04,816 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 22:24:50] 2025-11-24 21:24:04,816 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 22:24:50] 2025-11-24 21:24:04,818 | INFO     | did not find any defunct processes belonging to 3751
[2025-11-24 22:24:50] 2025-11-24 21:24:04,820 | INFO     | did not find any defunct processes belonging to 3751
[2025-11-24 22:24:50] 2025-11-24 21:24:04,898 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 22:24:50] 2025-11-24 21:24:04,898 | INFO     | ready for new job
[2025-11-24 22:24:50] 2025-11-24 21:24:04,898 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 22:24:50] 2025-11-24 21:24:04,903 | INFO     | ***************************************
[2025-11-24 22:24:50] 2025-11-24 21:24:04,903 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 22:24:50] 2025-11-24 21:24:04,903 | INFO     | ***************************************
[2025-11-24 22:24:50] 2025-11-24 21:24:04,904 | INFO     | 
[2025-11-24 22:24:50] 2025-11-24 21:24:04,904 | INFO     | pilot is running in a VM
[2025-11-24 22:24:50] 2025-11-24 21:24:04,904 | INFO     | architecture information:
[2025-11-24 22:24:50] 2025-11-24 21:24:04,920 | INFO     | executing command: cat /etc/os-release
[2025-11-24 22:24:50] 2025-11-24 21:24:05,233 | INFO     | cat /etc/os-release:
[2025-11-24 22:24:50] NAME="CentOS Linux"
[2025-11-24 22:24:50] VERSION="7 (Core)"
[2025-11-24 22:24:50] ID="centos"
[2025-11-24 22:24:50] ID_LIKE="rhel fedora"
[2025-11-24 22:24:50] VERSION_ID="7"
[2025-11-24 22:24:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 22:24:50] ANSI_COLOR="0;31"
[2025-11-24 22:24:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 22:24:50] HOME_URL="https://www.centos.org/"
[2025-11-24 22:24:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 22:24:50] 
[2025-11-24 22:24:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 22:24:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 22:24:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 22:24:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 22:24:50] 
[2025-11-24 22:24:50] 2025-11-24 21:24:05,233 | INFO     | ***************************************
[2025-11-24 22:24:50] 2025-11-24 21:24:05,737 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-11-24 22:24:50] 2025-11-24 21:24:06,020 | INFO     | sufficient remaining disk space (493936967680 B)
[2025-11-24 22:24:50] 2025-11-24 21:24:06,020 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 22:24:50] 2025-11-24 21:24:06,020 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 22:24:50] 2025-11-24 21:24:06,021 | INFO     | update_server=False
[2025-11-24 22:24:50] 2025-11-24 21:24:06,021 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 22:24:50] 2025-11-24 21:24:06,021 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 22:24:50] 2025-11-24 21:24:06,022 | INFO     | aborting loop
[2025-11-24 22:24:50] 2025-11-24 21:24:06,024 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 22:24:50] 2025-11-24 21:24:06,209 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 22:24:50] 2025-11-24 21:24:06,580 | INFO     | all data control threads have been joined
[2025-11-24 22:24:50] 2025-11-24 21:24:06,632 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 22:24:50] 2025-11-24 21:24:06,884 | INFO     | all job control threads have been joined
[2025-11-24 22:24:50] 2025-11-24 21:24:07,027 | INFO     | [job] retrieve thread has finished
[2025-11-24 22:24:50] 2025-11-24 21:24:07,028 | INFO     | [job] job monitor thread has finished
[2025-11-24 22:24:50] 2025-11-24 21:24:07,089 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 22:24:50] 2025-11-24 21:24:07,403 | INFO     | all payload control threads have been joined
[2025-11-24 22:24:50] 2025-11-24 21:24:07,586 | INFO     | [data] control thread has finished
[2025-11-24 22:24:50] 2025-11-24 21:24:07,609 | INFO     | [job] validate thread has finished
[2025-11-24 22:24:50] 2025-11-24 21:24:07,638 | INFO     | [job] queue monitor thread has finished
[2025-11-24 22:24:50] 2025-11-24 21:24:07,806 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 22:24:50] 2025-11-24 21:24:07,890 | INFO     | [job] control thread has finished
[2025-11-24 22:24:50] 2025-11-24 21:24:08,011 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 22:24:50] 2025-11-24 21:24:08,020 | INFO     | [data] copytool_in thread has finished
[2025-11-24 22:24:50] 2025-11-24 21:24:08,031 | INFO     | [data] copytool_out thread has finished
[2025-11-24 22:24:50] 2025-11-24 21:24:08,067 | INFO     | [payload] validate_post thread has finished
[2025-11-24 22:24:50] 2025-11-24 21:24:08,267 | INFO     | [payload] failed_post thread has finished
[2025-11-24 22:24:50] 2025-11-24 21:24:08,409 | INFO     | [payload] control thread has finished
[2025-11-24 22:24:50] 2025-11-24 21:24:08,502 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 22:24:50] 2025-11-24 21:24:10,218 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 22:24:50] 2025-11-24 21:24:33,888 | INFO     | PID=29543 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-24 22:24:50] 2025-11-24 21:24:33,888 | INFO     | .. there are 2 such processes running
[2025-11-24 22:24:50] 2025-11-24 21:24:33,890 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 22:24:50] 2025-11-24 21:24:33,890 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 22:24:50] 2025-11-24 21:24:33,890 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 22:24:50] 2025-11-24 21:24:40,558 | INFO     | [monitor] cgroup control has ended
[2025-11-24 22:24:50] 2025-11-24 21:24:40,574 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139639633413952)>', '<ExcThread(monitor, started 139639335655168)>']
[2025-11-24 22:24:50] 2025-11-24 21:24:40,931 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 22:24:50] 2025-11-24 21:24:40,932 | INFO     | [monitor] control thread has ended
[2025-11-24 22:24:50] 2025-11-24 21:24:45,600 | INFO     | all workflow threads have been joined
[2025-11-24 22:24:50] 2025-11-24 21:24:45,601 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 22:24:50] 2025-11-24 21:24:45,601 | INFO     | traces error code: 0
[2025-11-24 22:24:50] 2025-11-24 21:24:45,601 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 22:24:50] 2025-11-24 21:24:45,810 [wrapper] ==== pilot stdout END ====
[2025-11-24 22:24:50] 2025-11-24 21:24:45,872 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 22:24:50] 2025-11-24 21:24:45,956 [wrapper] pilotpid: 29543
[2025-11-24 22:24:50] 2025-11-24 21:24:46,069 [wrapper] Pilot exit status: 0
[2025-11-24 22:24:50] 2025-11-24 21:24:46,576 [wrapper] pandaids: 6893860973
[2025-11-24 22:24:50] 2025-11-24 21:24:47,221 [wrapper] cleanup supervisor_pilot 12213 29544
[2025-11-24 22:24:50] 2025-11-24 21:24:47,315 [wrapper] Test setup, not cleaning
[2025-11-24 22:24:50] 2025-11-24 21:24:47,448 [wrapper] apfmon messages muted
[2025-11-24 22:24:50] 2025-11-24 21:24:47,536 [wrapper] ==== wrapper stdout END ====
[2025-11-24 22:24:50] 2025-11-24 21:24:47,650 [wrapper] ==== wrapper stderr END ====
[2025-11-24 22:24:50]  *** Error codes and diagnostics ***
[2025-11-24 22:24:50]     "exeErrorCode": 0,
[2025-11-24 22:24:50]     "exeErrorDiag": "",
[2025-11-24 22:24:50]     "pilotErrorCode": 0,
[2025-11-24 22:24:50]     "pilotErrorDiag": "",
[2025-11-24 22:24:50]  *** Listing of results directory ***
[2025-11-24 22:24:50] total 1324156
[2025-11-24 22:24:50] -rw-r--r--. 1 boinc boinc    576529 Nov 20 14:50 pilot3.tar.gz
[2025-11-24 22:24:50] -rw-r--r--. 1 boinc boinc      5112 Nov 20 14:51 queuedata.json
[2025-11-24 22:24:50] -rwx------. 1 boinc boinc     36292 Nov 20 14:52 runpilot2-wrapper.sh
[2025-11-24 22:24:50] -rw-r--r--. 1 boinc boinc       100 Nov 24 01:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 22:24:50] -rwxr-xr-x. 1 boinc boinc      7986 Nov 24 01:27 run_atlas
[2025-11-24 22:24:50] -rw-r--r--. 1 boinc boinc       105 Nov 24 01:27 job.xml
[2025-11-24 22:24:50] -rw-r--r--. 1 boinc boinc      6391 Nov 24 01:27 init_data.xml
[2025-11-24 22:24:50] -rw-r--r--. 2 boinc boinc 408769870 Nov 24 01:27 EVNT.47493127._000562.pool.root.1
[2025-11-24 22:24:50] -rw-r--r--. 2 boinc boinc     15847 Nov 24 01:27 start_atlas.sh
[2025-11-24 22:24:50] drwxrwx--x. 2 boinc boinc        68 Nov 24 01:27 shared
[2025-11-24 22:24:50] -rw-r--r--. 2 boinc boinc    590102 Nov 24 01:27 input.tar.gz
[2025-11-24 22:24:50] -rw-r--r--. 1 boinc boinc         0 Nov 24 01:27 boinc_lockfile
[2025-11-24 22:24:50] -rw-r--r--. 1 boinc boinc      2786 Nov 24 01:27 pandaJob.out
[2025-11-24 22:24:50] -rw-------. 1 boinc boinc    989786 Nov 24 01:31 agis_schedconf.cvmfs.json
[2025-11-24 22:24:50] drwx------. 5 boinc boinc      4096 Nov 24 01:31 pilot3
[2025-11-24 22:24:50] -rw-r--r--. 1 boinc boinc       533 Nov 24 21:47 boinc_task_state.xml
[2025-11-24 22:24:50] -rw-------. 1 boinc boinc 918479456 Nov 24 22:20 HITS.47523449._005612.pool.root.1
[2025-11-24 22:24:50] -rw-------. 1 boinc boinc      1033 Nov 24 22:21 memory_monitor_summary.json
[2025-11-24 22:24:50] -rw-------. 1 boinc boinc   1516227 Nov 24 22:21 agis_ddmendpoints.agis.ALL.json
[2025-11-24 22:24:50] -rw-------. 1 boinc boinc   2359612 Nov 24 22:22 log.47523449._005612.job.log.tgz.1
[2025-11-24 22:24:50] -rw-------. 1 boinc boinc      8625 Nov 24 22:24 heartbeat.json
[2025-11-24 22:24:50] -rw-r--r--. 1 boinc boinc      8192 Nov 24 22:24 boinc_mmap_file
[2025-11-24 22:24:50] -rw-r--r--. 1 boinc boinc        29 Nov 24 22:24 wrapper_checkpoint.txt
[2025-11-24 22:24:50] -rw-------. 1 boinc boinc        95 Nov 24 22:24 pilot_heartbeat.json
[2025-11-24 22:24:50] -rw-------. 1 boinc boinc      4884 Nov 24 22:24 pilotlog.txt
[2025-11-24 22:24:50] -rw-------. 1 boinc boinc  10027288 Nov 24 22:24 log.47523449._005612.job.log.1
[2025-11-24 22:24:50] -rw-------. 1 boinc boinc       353 Nov 24 22:24 output.list
[2025-11-24 22:24:50] -rw-r--r--. 1 boinc boinc       620 Nov 24 22:24 runtime_log
[2025-11-24 22:24:50] -rw-------. 1 boinc boinc  12410880 Nov 24 22:24 result.tar.gz
[2025-11-24 22:24:50] -rw-r--r--. 1 boinc boinc      8817 Nov 24 22:24 runtime_log.err
[2025-11-24 22:24:50] -rw-------. 1 boinc boinc       662 Nov 24 22:24 1yCMDmKGKg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmlkGKDmnYh4Nm.diag
[2025-11-24 22:24:50] -rw-r--r--. 1 boinc boinc     21490 Nov 24 22:24 stderr.txt
[2025-11-24 22:24:50] HITS file was successfully produced:
[2025-11-24 22:24:50] -rw-------. 1 boinc boinc 918479456 Nov 24 22:20 shared/HITS.pool.root.1
[2025-11-24 22:24:50]  *** Contents of shared directory: ***
[2025-11-24 22:24:50] total 1308864
[2025-11-24 22:24:50] -rw-r--r--. 2 boinc boinc 408769870 Nov 24 01:27 ATLAS.root_0
[2025-11-24 22:24:50] -rw-r--r--. 2 boinc boinc     15847 Nov 24 01:27 start_atlas.sh
[2025-11-24 22:24:50] -rw-r--r--. 2 boinc boinc    590102 Nov 24 01:27 input.tar.gz
[2025-11-24 22:24:50] -rw-------. 1 boinc boinc 918479456 Nov 24 22:20 HITS.pool.root.1
[2025-11-24 22:24:50] -rw-------. 1 boinc boinc  12410880 Nov 24 22:24 result.tar.gz
22:24:52 (25759): run_atlas exited; CPU time 339896.935775
22:24:52 (25759): called boinc_finish(0)

</stderr_txt>
]]>

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