Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:14:05 (1904087): wrapper (7.7.26015): starting
16:14:05 (1904087): wrapper: running run_atlas (--nthreads 4)
[2025-11-21 16:14:05] Arguments: --nthreads 4
[2025-11-21 16:14:05] Threads: 4
[2025-11-21 16:14:05] Checking for CVMFS
[2025-11-21 16:14:05] No cvmfs_config command found, will try listing directly
[2025-11-21 16:14:05] CVMFS is ok
[2025-11-21 16:14:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 16:14:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 16:14:05] Further information can be found at the LHC@home message board.
[2025-11-21 16:14:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 16:14:05] Checking for apptainer binary...
[2025-11-21 16:14:05] which: no apptainer in ((null))
[2025-11-21 16:14:05] apptainer is not installed, using version from CVMFS
[2025-11-21 16:14:05] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 16:14:05] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot116/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2025-11-21 16:14:05] apptainer works
[2025-11-21 16:14:05] Set ATHENA_PROC_NUMBER=4
[2025-11-21 16:14:05] Set ATHENA_CORE_NUMBER=4
[2025-11-21 16:14:05] Starting ATLAS job with PandaID=6893860371
[2025-11-21 16:14:05] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot116/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 07:35:37]  *** The last 200 lines of the pilot log: ***
[2025-11-22 07:35:37] 2025-11-22 06:25:43,338 | INFO     | time since job start (54684s) is within the limit (172800.0s)
[2025-11-22 07:35:37] 2025-11-22 06:25:44,118 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-22 07:35:37] 2025-11-22 06:25:44,139 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2656.677757812501
[2025-11-22 07:35:37] 2025-11-22 06:25:44,165 | INFO     | using path: /scratch/boinc/var/slot116/slots/0/PanDA_Pilot-6893860371/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 07:35:37] 2025-11-22 06:25:44,166 | INFO     | extracted standard info from prmon json
[2025-11-22 07:35:37] 2025-11-22 06:25:44,166 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 07:35:37] 2025-11-22 06:25:44,166 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 07:35:37] 2025-11-22 06:25:44,180 | INFO     | fitting pss+swap vs Time
[2025-11-22 07:35:37] 2025-11-22 06:25:44,181 | INFO     | sum of square deviations: 223049792353.99905
[2025-11-22 07:35:37] 2025-11-22 06:25:44,201 | INFO     | sum of deviations: 858904394462.4707
[2025-11-22 07:35:37] 2025-11-22 06:25:44,201 | INFO     | mean x: 1763765391.501116
[2025-11-22 07:35:37] 2025-11-22 06:25:44,201 | INFO     | mean y: 2298213.0301339286
[2025-11-22 07:35:37] 2025-11-22 06:25:44,201 | INFO     | intersect: -6789485045.646224
[2025-11-22 07:35:37] 2025-11-22 06:25:44,202 | INFO     | chi2: 3.5614638959001983
[2025-11-22 07:35:37] 2025-11-22 06:25:44,203 | INFO     | sum of square deviations: 219336495128.9988
[2025-11-22 07:35:37] 2025-11-22 06:25:44,223 | INFO     | sum of deviations: 1013851317004.1155
[2025-11-22 07:35:37] 2025-11-22 06:25:44,224 | INFO     | mean x: 1763765239.0011222
[2025-11-22 07:35:37] 2025-11-22 06:25:44,224 | INFO     | mean y: 2304569.884399551
[2025-11-22 07:35:37] 2025-11-22 06:25:44,224 | INFO     | intersect: -8150445885.053211
[2025-11-22 07:35:37] 2025-11-22 06:25:44,225 | INFO     | chi2: 1.9604730702433182
[2025-11-22 07:35:37] 2025-11-22 06:25:44,225 | INFO     | current chi2=1.9604730702433182 (change=44.9531673618781 %)
[2025-11-22 07:35:37] 2025-11-22 06:25:44,226 | INFO     | sum of square deviations: 215664640541.49866
[2025-11-22 07:35:37] 2025-11-22 06:25:44,246 | INFO     | sum of deviations: 1005709613030.6467
[2025-11-22 07:35:37] 2025-11-22 06:25:44,246 | INFO     | mean x: 1763765086.5011287
[2025-11-22 07:35:37] 2025-11-22 06:25:44,246 | INFO     | mean y: 2304230.854401806
[2025-11-22 07:35:37] 2025-11-22 06:25:44,246 | INFO     | intersect: -8222667179.239549
[2025-11-22 07:35:37] 2025-11-22 06:25:44,247 | INFO     | chi2: 1.9535768939501459
[2025-11-22 07:35:37] 2025-11-22 06:25:44,247 | INFO     | current chi2=1.9535768939501459 (change=0.3517608274168437 %)
[2025-11-22 07:35:37] 2025-11-22 06:25:44,247 | INFO     | right removable region: 885
[2025-11-22 07:35:37] 2025-11-22 06:25:44,248 | INFO     | sum of square deviations: 219336494518.9988
[2025-11-22 07:35:37] 2025-11-22 06:25:44,268 | INFO     | sum of deviations: 697219784762.3657
[2025-11-22 07:35:37] 2025-11-22 06:25:44,269 | INFO     | mean x: 1763765544.0011222
[2025-11-22 07:35:37] 2025-11-22 06:25:44,269 | INFO     | mean y: 2304839.634118967
[2025-11-22 07:35:37] 2025-11-22 06:25:44,269 | INFO     | intersect: -5604296267.29303
[2025-11-22 07:35:37] 2025-11-22 06:25:44,270 | INFO     | chi2: 1.7065010021792963
[2025-11-22 07:35:37] 2025-11-22 06:25:44,270 | INFO     | current chi2=1.7065010021792963 (change=52.08428185545427 %)
[2025-11-22 07:35:37] 2025-11-22 06:25:44,271 | INFO     | sum of square deviations: 215664639321.49866
[2025-11-22 07:35:37] 2025-11-22 06:25:44,291 | INFO     | sum of deviations: 665300522148.8071
[2025-11-22 07:35:37] 2025-11-22 06:25:44,292 | INFO     | mean x: 1763765696.5011287
[2025-11-22 07:35:37] 2025-11-22 06:25:44,292 | INFO     | mean y: 2306164.6941309255
[2025-11-22 07:35:37] 2025-11-22 06:25:44,292 | INFO     | intersect: -5438707450.343041
[2025-11-22 07:35:37] 2025-11-22 06:25:44,293 | INFO     | chi2: 1.6847225850927057
[2025-11-22 07:35:37] 2025-11-22 06:25:44,293 | INFO     | current chi2=1.6847225850927057 (change=1.2762030059624008 %)
[2025-11-22 07:35:37] 2025-11-22 06:25:44,293 | INFO     | left removable region: 20
[2025-11-22 07:35:37] 2025-11-22 06:25:44,294 | INFO     | sum of square deviations: 200690153964.99872
[2025-11-22 07:35:37] 2025-11-22 06:25:44,313 | INFO     | sum of deviations: 763998278630.9579
[2025-11-22 07:35:37] 2025-11-22 06:25:44,313 | INFO     | mean x: 1763765666.001156
[2025-11-22 07:35:37] 2025-11-22 06:25:44,314 | INFO     | mean y: 2314253.040462428
[2025-11-22 07:35:37] 2025-11-22 06:25:44,314 | INFO     | intersect: -6712085562.349987
[2025-11-22 07:35:37] 2025-11-22 06:25:44,315 | INFO     | chi2: 0.05723800237270182
[2025-11-22 07:35:37] 2025-11-22 06:25:44,315 | INFO     | current memory leak: 3.81 B/s (using 865 data points, chi2=0.06)
[2025-11-22 07:35:37] 2025-11-22 06:25:44,316 | INFO     | could have reported an average CPU frequency of 2691 MHz (34 samples)
[2025-11-22 07:35:37] 2025-11-22 06:25:44,316 | INFO     | ..............................
[2025-11-22 07:35:37] 2025-11-22 06:25:44,316 | INFO     | . Timing measurements:
[2025-11-22 07:35:37] 2025-11-22 06:25:44,316 | INFO     | . get job = 0 s
[2025-11-22 07:35:37] 2025-11-22 06:25:44,316 | INFO     | . initial setup = 1 s
[2025-11-22 07:35:37] 2025-11-22 06:25:44,316 | INFO     | . payload setup = 9 s
[2025-11-22 07:35:37] 2025-11-22 06:25:44,317 | INFO     | . stage-in = 0 s
[2025-11-22 07:35:37] 2025-11-22 06:25:44,317 | INFO     | . payload execution = 54642 s
[2025-11-22 07:35:37] 2025-11-22 06:25:44,317 | INFO     | . stage-out = 2 s
[2025-11-22 07:35:37] 2025-11-22 06:25:44,317 | INFO     | . log creation = 0 s
[2025-11-22 07:35:37] 2025-11-22 06:25:44,317 | INFO     | ..............................
[2025-11-22 07:35:37] 2025-11-22 06:25:44,413 | INFO     | 
[2025-11-22 07:35:37] 2025-11-22 06:25:44,414 | INFO     | job summary report
[2025-11-22 07:35:37] 2025-11-22 06:25:44,414 | INFO     | --------------------------------------------------
[2025-11-22 07:35:37] 2025-11-22 06:25:44,414 | INFO     | PanDA job id: 6893860371
[2025-11-22 07:35:37] 2025-11-22 06:25:44,414 | INFO     | task id: 47523449
[2025-11-22 07:35:37] 2025-11-22 06:25:44,414 | INFO     | errors: (none)
[2025-11-22 07:35:37] 2025-11-22 06:25:44,414 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 07:35:37] 2025-11-22 06:25:44,414 | INFO     | pilot state: finished 
[2025-11-22 07:35:37] 2025-11-22 06:25:44,414 | INFO     | transexitcode: 0
[2025-11-22 07:35:37] 2025-11-22 06:25:44,415 | INFO     | exeerrorcode: 0
[2025-11-22 07:35:37] 2025-11-22 06:25:44,415 | INFO     | exeerrordiag: 
[2025-11-22 07:35:37] 2025-11-22 06:25:44,415 | INFO     | exitcode: 0
[2025-11-22 07:35:37] 2025-11-22 06:25:44,415 | INFO     | exitmsg: OK
[2025-11-22 07:35:37] 2025-11-22 06:25:44,415 | INFO     | cpuconsumptiontime: 216408 s
[2025-11-22 07:35:37] 2025-11-22 06:25:44,415 | INFO     | nevents: 1000
[2025-11-22 07:35:37] 2025-11-22 06:25:44,415 | INFO     | neventsw: 0
[2025-11-22 07:35:37] 2025-11-22 06:25:44,415 | INFO     | pid: 1915900
[2025-11-22 07:35:37] 2025-11-22 06:25:44,415 | INFO     | pgrp: 1915900
[2025-11-22 07:35:37] 2025-11-22 06:25:44,415 | INFO     | corecount: 4
[2025-11-22 07:35:37] 2025-11-22 06:25:44,415 | INFO     | event service: False
[2025-11-22 07:35:37] 2025-11-22 06:25:44,416 | INFO     | sizes: {0: 2298648, 1: 2298847, 8: 2299109, 12: 2299137, 54656: 2351706, 54657: 2351705, 54659: 2360963, 54667: 2361153}
[2025-11-22 07:35:37] 2025-11-22 06:25:44,416 | INFO     | --------------------------------------------------
[2025-11-22 07:35:37] 2025-11-22 06:25:44,416 | INFO     | 
[2025-11-22 07:35:37] 2025-11-22 06:25:44,416 | INFO     | executing command: ls -lF /scratch/boinc/var/slot116/slots/0
[2025-11-22 07:35:37] 2025-11-22 06:25:44,443 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 07:35:37] 2025-11-22 06:25:44,443 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 07:35:37] 2025-11-22 06:25:44,443 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 07:35:37] 2025-11-22 06:25:44,443 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 07:35:37] 2025-11-22 06:25:44,444 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 07:35:37] 2025-11-22 06:25:44,444 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 07:35:37] 2025-11-22 06:25:44,444 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 07:35:37] 2025-11-22 06:25:44,444 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 07:35:37] 2025-11-22 06:25:44,444 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 07:35:37] 2025-11-22 06:25:44,444 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 07:35:37] 2025-11-22 06:25:44,444 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 07:35:37] 2025-11-22 06:25:44,444 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 07:35:37] 2025-11-22 06:25:44,444 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 07:35:37] 2025-11-22 06:25:44,444 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 07:35:37] 2025-11-22 06:25:44,445 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 07:35:37] 2025-11-22 06:25:44,445 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 07:35:37] 2025-11-22 06:25:44,445 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 07:35:37] 2025-11-22 06:25:44,445 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 07:35:37] 2025-11-22 06:25:44,445 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 07:35:37] 2025-11-22 06:25:44,445 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 07:35:37] 2025-11-22 06:25:44,445 | INFO     | job 6893860371 has completed (purged errors)
[2025-11-22 07:35:37] 2025-11-22 06:25:44,445 | INFO     | overall cleanup function is called
[2025-11-22 07:35:37] 2025-11-22 06:25:45,462 | INFO     | --- collectZombieJob: --- 10, [1915900]
[2025-11-22 07:35:37] 2025-11-22 06:25:45,462 | INFO     | zombie collector waiting for pid 1915900
[2025-11-22 07:35:37] 2025-11-22 06:25:45,462 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 07:35:37] 2025-11-22 06:25:45,463 | INFO     | collected zombie processes
[2025-11-22 07:35:37] 2025-11-22 06:25:45,463 | INFO     | will attempt to kill all subprocesses of pid=1915900
[2025-11-22 07:35:37] 2025-11-22 06:25:46,236 | INFO     | process IDs to be killed: [1915900] (in reverse order)
[2025-11-22 07:35:37] 2025-11-22 06:25:46,488 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 07:35:37] 2025-11-22 06:25:46,488 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 07:35:37] 2025-11-22 06:25:46,518 | INFO     | did not find any defunct processes belonging to 1915900
[2025-11-22 07:35:37] 2025-11-22 06:25:46,545 | INFO     | did not find any defunct processes belonging to 1915900
[2025-11-22 07:35:37] 2025-11-22 06:25:46,547 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 07:35:37] 2025-11-22 06:25:46,547 | INFO     | ready for new job
[2025-11-22 07:35:37] 2025-11-22 06:25:46,547 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 07:35:37] 2025-11-22 06:25:46,553 | INFO     | ***************************************
[2025-11-22 07:35:37] 2025-11-22 06:25:46,553 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 07:35:37] 2025-11-22 06:25:46,553 | INFO     | ***************************************
[2025-11-22 07:35:37] 2025-11-22 06:25:46,553 | INFO     | 
[2025-11-22 07:35:37] 2025-11-22 06:25:46,561 | INFO     | architecture information:
[2025-11-22 07:35:37] 2025-11-22 06:25:46,562 | INFO     | executing command: cat /etc/os-release
[2025-11-22 07:35:37] 2025-11-22 06:25:46,581 | INFO     | cat /etc/os-release:
[2025-11-22 07:35:37] NAME="CentOS Linux"
[2025-11-22 07:35:37] VERSION="7 (Core)"
[2025-11-22 07:35:37] ID="centos"
[2025-11-22 07:35:37] ID_LIKE="rhel fedora"
[2025-11-22 07:35:37] VERSION_ID="7"
[2025-11-22 07:35:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 07:35:37] ANSI_COLOR="0;31"
[2025-11-22 07:35:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 07:35:37] HOME_URL="https://www.centos.org/"
[2025-11-22 07:35:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 07:35:37] 
[2025-11-22 07:35:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 07:35:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 07:35:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 07:35:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 07:35:37] 
[2025-11-22 07:35:37] 2025-11-22 06:25:46,581 | INFO     | ***************************************
[2025-11-22 07:35:37] 2025-11-22 06:25:47,084 | INFO     | executing command: df -mP /scratch/boinc/var/slot116/slots/0
[2025-11-22 07:35:37] 2025-11-22 06:25:47,106 | INFO     | sufficient remaining disk space (3287945314304 B)
[2025-11-22 07:35:37] 2025-11-22 06:25:47,107 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 07:35:37] 2025-11-22 06:25:47,107 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 07:35:37] 2025-11-22 06:25:47,107 | INFO     | update_server=False
[2025-11-22 07:35:37] 2025-11-22 06:25:47,107 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 07:35:37] 2025-11-22 06:25:47,174 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-22 07:35:37] 2025-11-22 06:25:47,174 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-22 07:35:37] 2025-11-22 06:25:47,174 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 07:35:37] 2025-11-22 06:25:47,174 | INFO     | will abort loop
[2025-11-22 07:35:37] 2025-11-22 06:25:47,537 | INFO     | all data control threads have been joined
[2025-11-22 07:35:37] 2025-11-22 06:25:47,567 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 07:35:37] 2025-11-22 06:25:47,659 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 07:35:37] 2025-11-22 06:25:47,748 | INFO     | [monitor] cgroup control has ended
[2025-11-22 07:35:37] 2025-11-22 06:25:47,836 | INFO     | all job control threads have been joined
[2025-11-22 07:35:37] 2025-11-22 06:25:48,112 | INFO     | [job] retrieve thread has finished
[2025-11-22 07:35:37] 2025-11-22 06:25:48,175 | INFO     | [job] job monitor thread has finished
[2025-11-22 07:35:37] 2025-11-22 06:25:48,222 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 07:35:37] 2025-11-22 06:25:48,375 | INFO     | [payload] validate_post thread has finished
[2025-11-22 07:35:37] 2025-11-22 06:25:48,389 | INFO     | [job] validate thread has finished
[2025-11-22 07:35:37] 2025-11-22 06:25:48,397 | INFO     | all payload control threads have been joined
[2025-11-22 07:35:37] 2025-11-22 06:25:48,542 | INFO     | [data] control thread has finished
[2025-11-22 07:35:37] 2025-11-22 06:25:48,750 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 07:35:37] 2025-11-22 06:25:48,837 | INFO     | [payload] failed_post thread has finished
[2025-11-22 07:35:37] 2025-11-22 06:25:48,842 | INFO     | [job] control thread has finished
[2025-11-22 07:35:37] 2025-11-22 06:25:49,221 | INFO     | [data] copytool_in thread has finished
[2025-11-22 07:35:37] 2025-11-22 06:25:49,269 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 07:35:37] 2025-11-22 06:25:49,338 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 07:35:37] 2025-11-22 06:25:49,402 | INFO     | [payload] control thread has finished
[2025-11-22 07:35:37] 2025-11-22 06:25:49,425 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 07:35:37] 2025-11-22 06:25:49,573 | INFO     | [data] copytool_out thread has finished
[2025-11-22 07:35:37] 2025-11-22 06:25:50,430 | INFO     | [job] queue monitor thread has finished
[2025-11-22 07:35:37] 2025-11-22 06:25:51,664 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 07:35:37] 2025-11-22 06:25:52,462 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23087791097664)>', '<ExcThread(monitor, started 23087546320640)>']
[2025-11-22 07:35:37] 2025-11-22 06:25:57,487 | INFO     | all workflow threads have been joined
[2025-11-22 07:35:37] 2025-11-22 06:25:57,487 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 07:35:37] 2025-11-22 06:25:57,487 | INFO     | traces error code: 0
[2025-11-22 07:35:37] 2025-11-22 06:25:57,488 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 07:35:37] 2025-11-22 06:26:17,271 | INFO     | PID=1908133 has CPU usage=15.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-22 07:35:37] 2025-11-22 06:26:17,272 | INFO     | .. there are 7 such processes running
[2025-11-22 07:35:37] 2025-11-22 06:26:17,272 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 07:35:37] 2025-11-22 06:26:17,273 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 07:35:37] 2025-11-22 06:26:17,273 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 07:35:37] 2025-11-22 06:26:17,273 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 07:35:37] 2025-11-22 06:26:17,273 | INFO     | [monitor] control thread has ended
[2025-11-22 07:35:37] 2025-11-22 06:26:17,416 [wrapper] ==== pilot stdout END ====
[2025-11-22 07:35:37] 2025-11-22 06:26:17,420 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 07:35:37] 2025-11-22 06:26:17,423 [wrapper] pilotpid: 1908133
[2025-11-22 07:35:37] 2025-11-22 06:26:17,427 [wrapper] Pilot exit status: 0
[2025-11-22 07:35:37] 2025-11-22 06:26:17,444 [wrapper] pandaids: 6893860371
[2025-11-22 07:35:37] 2025-11-22 06:26:17,602 [wrapper] cleanup supervisor_pilot 3150863 1908134
[2025-11-22 07:35:37] 2025-11-22 06:26:17,607 [wrapper] Test setup, not cleaning
[2025-11-22 07:35:37] 2025-11-22 06:26:17,611 [wrapper] apfmon messages muted
[2025-11-22 07:35:37] 2025-11-22 06:26:17,615 [wrapper] ==== wrapper stdout END ====
[2025-11-22 07:35:37] 2025-11-22 06:26:17,619 [wrapper] ==== wrapper stderr END ====
[2025-11-22 07:35:37]  *** Error codes and diagnostics ***
[2025-11-22 07:35:37]     "exeErrorCode": 0,
[2025-11-22 07:35:37]     "exeErrorDiag": "",
[2025-11-22 07:35:37]     "pilotErrorCode": 0,
[2025-11-22 07:35:37]     "pilotErrorDiag": "",
[2025-11-22 07:35:37]  *** Listing of results directory ***
[2025-11-22 07:35:37] total 1324556
[2025-11-22 07:35:37] -rw-r--r-- 1 boinc boinc    576529 Nov 20 14:12 pilot3.tar.gz
[2025-11-22 07:35:37] -rwx------ 1 boinc boinc     36292 Nov 20 14:48 runpilot2-wrapper.sh
[2025-11-22 07:35:37] -rw-r--r-- 1 boinc boinc      5112 Nov 20 14:48 queuedata.json
[2025-11-22 07:35:37] -rw-r--r-- 1 boinc boinc       100 Nov 21 16:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 07:35:37] -rwxr-xr-x 1 boinc boinc      7986 Nov 21 16:14 run_atlas
[2025-11-22 07:35:37] -rw-r--r-- 1 boinc boinc       105 Nov 21 16:14 job.xml
[2025-11-22 07:35:37] -rw-r--r-- 1 boinc boinc      6687 Nov 21 16:14 init_data.xml
[2025-11-22 07:35:37] -rw-r--r-- 2 boinc boinc 409305273 Nov 21 16:14 EVNT.47493127._000557.pool.root.1
[2025-11-22 07:35:37] -rw-r--r-- 2 boinc boinc     15847 Nov 21 16:14 start_atlas.sh
[2025-11-22 07:35:37] drwxrwx--x 2 boinc boinc      4096 Nov 21 16:14 shared
[2025-11-22 07:35:37] -rw-r--r-- 2 boinc boinc    590099 Nov 21 16:14 input.tar.gz
[2025-11-22 07:35:37] -rw-r--r-- 1 boinc boinc         0 Nov 21 16:14 boinc_lockfile
[2025-11-22 07:35:37] -rw-r--r-- 1 boinc boinc      2786 Nov 21 16:14 pandaJob.out
[2025-11-22 07:35:37] -rw------- 1 boinc boinc    989817 Nov 21 16:14 agis_schedconf.cvmfs.json
[2025-11-22 07:35:37] drwx------ 5 boinc boinc      4096 Nov 21 16:14 pilot3
[2025-11-22 07:35:37] -rw-r--r-- 1 boinc boinc       531 Nov 22 07:19 boinc_task_state.xml
[2025-11-22 07:35:37] -rw------- 1 boinc boinc 924663076 Nov 22 07:24 HITS.47523449._005565.pool.root.1
[2025-11-22 07:35:37] -rw------- 1 boinc boinc      1040 Nov 22 07:25 memory_monitor_summary.json
[2025-11-22 07:35:37] -rw------- 1 boinc boinc   1526164 Nov 22 07:25 agis_ddmendpoints.agis.ALL.json
[2025-11-22 07:35:37] -rw------- 1 boinc boinc   1647090 Nov 22 07:25 log.47523449._005565.job.log.tgz.1
[2025-11-22 07:35:37] -rw------- 1 boinc boinc      8593 Nov 22 07:25 heartbeat.json
[2025-11-22 07:35:37] -rw------- 1 boinc boinc        95 Nov 22 07:26 pilot_heartbeat.json
[2025-11-22 07:35:37] -rw------- 1 boinc boinc       823 Nov 22 07:26 pilotlog.txt
[2025-11-22 07:35:37] -rw------- 1 boinc boinc   7578835 Nov 22 07:26 log.47523449._005565.job.log.1
[2025-11-22 07:35:37] -rw------- 1 boinc boinc       353 Nov 22 07:26 output.list
[2025-11-22 07:35:37] -rw-r--r-- 1 boinc boinc       620 Nov 22 07:26 runtime_log
[2025-11-22 07:35:37] -rw------- 1 boinc boinc   9246720 Nov 22 07:26 result.tar.gz
[2025-11-22 07:35:37] -rw-r--r-- 1 boinc boinc      9223 Nov 22 07:26 runtime_log.err
[2025-11-22 07:35:37] -rw------- 1 boinc boinc       670 Nov 22 07:26 QQUMDmVCKg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmNkGKDmd9aCvn.diag
[2025-11-22 07:35:37] -rw-r--r-- 1 boinc boinc        28 Nov 22 07:35 wrapper_checkpoint.txt
[2025-11-22 07:35:37] -rw-r--r-- 1 boinc boinc      8192 Nov 22 07:35 boinc_mmap_file
[2025-11-22 07:35:37] -rw-r--r-- 1 boinc boinc     21101 Nov 22 07:35 stderr.txt
[2025-11-22 07:35:37] HITS file was successfully produced:
[2025-11-22 07:35:37] -rw------- 1 boinc boinc 924663076 Nov 22 07:24 shared/HITS.pool.root.1
[2025-11-22 07:35:37]  *** Contents of shared directory: ***
[2025-11-22 07:35:37] total 1312344
[2025-11-22 07:35:37] -rw-r--r-- 2 boinc boinc 409305273 Nov 21 16:14 ATLAS.root_0
[2025-11-22 07:35:37] -rw-r--r-- 2 boinc boinc     15847 Nov 21 16:14 start_atlas.sh
[2025-11-22 07:35:37] -rw-r--r-- 2 boinc boinc    590099 Nov 21 16:14 input.tar.gz
[2025-11-22 07:35:37] -rw------- 1 boinc boinc 924663076 Nov 22 07:24 HITS.pool.root.1
[2025-11-22 07:35:37] -rw------- 1 boinc boinc   9246720 Nov 22 07:26 result.tar.gz
07:35:38 (1904087): run_atlas exited; CPU time 219199.671424
07:35:38 (1904087): called boinc_finish(0)

</stderr_txt>
]]>

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