Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:35:58 (1965750): wrapper (7.7.26015): starting
14:35:58 (1965750): wrapper: running run_atlas (--nthreads 4)
[2025-11-23 14:35:58] Arguments: --nthreads 4
[2025-11-23 14:35:58] Threads: 4
[2025-11-23 14:35:58] Checking for CVMFS
[2025-11-23 14:35:58] No cvmfs_config command found, will try listing directly
[2025-11-23 14:35:58] CVMFS is ok
[2025-11-23 14:35:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 14:35:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 14:35:58] Further information can be found at the LHC@home message board.
[2025-11-23 14:35:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 14:35:58] Checking for apptainer binary...
[2025-11-23 14:35:58] which: no apptainer in ((null))
[2025-11-23 14:35:58] apptainer is not installed, using version from CVMFS
[2025-11-23 14:35:58] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 14:35:58] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot116/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2025-11-23 14:35:58] apptainer works
[2025-11-23 14:35:58] Set ATHENA_PROC_NUMBER=4
[2025-11-23 14:35:58] Set ATHENA_CORE_NUMBER=4
[2025-11-23 14:35:58] Starting ATLAS job with PandaID=6893848585
[2025-11-23 14:35:58] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot116/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 07:30:22]  *** The last 200 lines of the pilot log: ***
[2025-11-24 07:30:22] 2025-11-24 06:19:39,472 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 07:30:22] 2025-11-24 06:19:39,494 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2652.48415625
[2025-11-24 07:30:22] 2025-11-24 06:19:39,517 | INFO     | using path: /scratch/boinc/var/slot116/slots/0/PanDA_Pilot-6893848585/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 07:30:22] 2025-11-24 06:19:39,518 | INFO     | extracted standard info from prmon json
[2025-11-24 07:30:22] 2025-11-24 06:19:39,518 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 07:30:22] 2025-11-24 06:19:39,518 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 07:30:22] 2025-11-24 06:19:39,535 | INFO     | fitting pss+swap vs Time
[2025-11-24 07:30:22] 2025-11-24 06:19:39,537 | INFO     | sum of square deviations: 298145361295.82983
[2025-11-24 07:30:22] 2025-11-24 06:19:39,560 | INFO     | sum of deviations: 723885654345.2976
[2025-11-24 07:30:22] 2025-11-24 06:19:39,560 | INFO     | mean x: 1763935081.106383
[2025-11-24 07:30:22] 2025-11-24 06:19:39,560 | INFO     | mean y: 2270205.254305978
[2025-11-24 07:30:22] 2025-11-24 06:19:39,560 | INFO     | intersect: -4280497418.09419
[2025-11-24 07:30:22] 2025-11-24 06:19:39,561 | INFO     | chi2: 4.424760984459576
[2025-11-24 07:30:22] 2025-11-24 06:19:39,563 | INFO     | sum of square deviations: 293637206468.2728
[2025-11-24 07:30:22] 2025-11-24 06:19:39,585 | INFO     | sum of deviations: 940286519471.6726
[2025-11-24 07:30:22] 2025-11-24 06:19:39,586 | INFO     | mean x: 1763934928.6069245
[2025-11-24 07:30:22] 2025-11-24 06:19:39,586 | INFO     | mean y: 2277520.3126272913
[2025-11-24 07:30:22] 2025-11-24 06:19:39,586 | INFO     | intersect: -5646203660.0637045
[2025-11-24 07:30:22] 2025-11-24 06:19:39,587 | INFO     | chi2: 2.0594950111142234
[2025-11-24 07:30:22] 2025-11-24 06:19:39,587 | INFO     | current chi2=2.0594950111142234 (change=53.45522575462316 %)
[2025-11-24 07:30:22] 2025-11-24 06:19:39,588 | INFO     | sum of square deviations: 289174726915.7157
[2025-11-24 07:30:22] 2025-11-24 06:19:39,600 | INFO     | monitor loop #3948: job 0:6893848585 is in state 'finished'
[2025-11-24 07:30:22] 2025-11-24 06:19:39,600 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 07:30:22] 2025-11-24 06:19:39,614 | INFO     | sum of deviations: 977102198521.4218
[2025-11-24 07:30:22] 2025-11-24 06:19:39,614 | INFO     | mean x: 1763934776.107472
[2025-11-24 07:30:22] 2025-11-24 06:19:39,614 | INFO     | mean y: 2278774.8055271236
[2025-11-24 07:30:22] 2025-11-24 06:19:39,615 | INFO     | intersect: -5957939692.990781
[2025-11-24 07:30:22] 2025-11-24 06:19:39,616 | INFO     | chi2: 1.896522154141673
[2025-11-24 07:30:22] 2025-11-24 06:19:39,616 | INFO     | current chi2=1.896522154141673 (change=7.913243590931505 %)
[2025-11-24 07:30:22] 2025-11-24 06:19:39,616 | INFO     | right removable region: 976
[2025-11-24 07:30:22] 2025-11-24 06:19:39,617 | INFO     | sum of square deviations: 293637142418.2729
[2025-11-24 07:30:22] 2025-11-24 06:19:39,637 | INFO     | sum of deviations: 557612850361.2875
[2025-11-24 07:30:22] 2025-11-24 06:19:39,637 | INFO     | mean x: 1763935233.6069245
[2025-11-24 07:30:22] 2025-11-24 06:19:39,638 | INFO     | mean y: 2275818.3401221996
[2025-11-24 07:30:22] 2025-11-24 06:19:39,638 | INFO     | intersect: -3347412662.360241
[2025-11-24 07:30:22] 2025-11-24 06:19:39,639 | INFO     | chi2: 2.6370073885182066
[2025-11-24 07:30:22] 2025-11-24 06:19:39,639 | INFO     | current chi2=2.6370073885182066 (change=40.40339358939902 %)
[2025-11-24 07:30:22] 2025-11-24 06:19:39,640 | INFO     | sum of square deviations: 289174598815.7155
[2025-11-24 07:30:22] 2025-11-24 06:19:39,660 | INFO     | sum of deviations: 526711831366.9405
[2025-11-24 07:30:22] 2025-11-24 06:19:39,660 | INFO     | mean x: 1763935386.107472
[2025-11-24 07:30:22] 2025-11-24 06:19:39,660 | INFO     | mean y: 2276873.857727738
[2025-11-24 07:30:22] 2025-11-24 06:19:39,660 | INFO     | intersect: -3210611261.6652107
[2025-11-24 07:30:22] 2025-11-24 06:19:39,661 | INFO     | chi2: 2.616207065905547
[2025-11-24 07:30:22] 2025-11-24 06:19:39,661 | INFO     | current chi2=2.616207065905547 (change=0.7887851472554195 %)
[2025-11-24 07:30:22] 2025-11-24 06:19:39,661 | INFO     | left removable region: 20
[2025-11-24 07:30:22] 2025-11-24 06:19:39,663 | INFO     | sum of square deviations: 270925582127.46744
[2025-11-24 07:30:22] 2025-11-24 06:19:39,682 | INFO     | sum of deviations: 737302936846.0781
[2025-11-24 07:30:22] 2025-11-24 06:19:39,682 | INFO     | mean x: 1763935355.6098325
[2025-11-24 07:30:22] 2025-11-24 06:19:39,682 | INFO     | mean y: 2286978.608786611
[2025-11-24 07:30:22] 2025-11-24 06:19:39,682 | INFO     | intersect: -4798126138.104069
[2025-11-24 07:30:22] 2025-11-24 06:19:39,683 | INFO     | chi2: 0.06961333302006574
[2025-11-24 07:30:22] 2025-11-24 06:19:39,683 | INFO     | current memory leak: 2.72 B/s (using 956 data points, chi2=0.07)
[2025-11-24 07:30:22] 2025-11-24 06:19:39,685 | INFO     | could have reported an average CPU frequency of 2655 MHz (37 samples)
[2025-11-24 07:30:22] 2025-11-24 06:19:39,685 | INFO     | ..............................
[2025-11-24 07:30:22] 2025-11-24 06:19:39,685 | INFO     | . Timing measurements:
[2025-11-24 07:30:22] 2025-11-24 06:19:39,685 | INFO     | . get job = 0 s
[2025-11-24 07:30:22] 2025-11-24 06:19:39,685 | INFO     | . initial setup = 1 s
[2025-11-24 07:30:22] 2025-11-24 06:19:39,685 | INFO     | . payload setup = 9 s
[2025-11-24 07:30:22] 2025-11-24 06:19:39,685 | INFO     | . stage-in = 0 s
[2025-11-24 07:30:22] 2025-11-24 06:19:39,685 | INFO     | . payload execution = 60162 s
[2025-11-24 07:30:22] 2025-11-24 06:19:39,685 | INFO     | . stage-out = 3 s
[2025-11-24 07:30:22] 2025-11-24 06:19:39,685 | INFO     | . log creation = 0 s
[2025-11-24 07:30:22] 2025-11-24 06:19:39,685 | INFO     | ..............................
[2025-11-24 07:30:22] 2025-11-24 06:19:39,775 | INFO     | 
[2025-11-24 07:30:22] 2025-11-24 06:19:39,775 | INFO     | job summary report
[2025-11-24 07:30:22] 2025-11-24 06:19:39,775 | INFO     | --------------------------------------------------
[2025-11-24 07:30:22] 2025-11-24 06:19:39,775 | INFO     | PanDA job id: 6893848585
[2025-11-24 07:30:22] 2025-11-24 06:19:39,775 | INFO     | task id: 47523449
[2025-11-24 07:30:22] 2025-11-24 06:19:39,775 | INFO     | errors: (none)
[2025-11-24 07:30:22] 2025-11-24 06:19:39,776 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 07:30:22] 2025-11-24 06:19:39,776 | INFO     | pilot state: finished 
[2025-11-24 07:30:22] 2025-11-24 06:19:39,776 | INFO     | transexitcode: 0
[2025-11-24 07:30:22] 2025-11-24 06:19:39,776 | INFO     | exeerrorcode: 0
[2025-11-24 07:30:22] 2025-11-24 06:19:39,776 | INFO     | exeerrordiag: 
[2025-11-24 07:30:22] 2025-11-24 06:19:39,776 | INFO     | exitcode: 0
[2025-11-24 07:30:22] 2025-11-24 06:19:39,776 | INFO     | exitmsg: OK
[2025-11-24 07:30:22] 2025-11-24 06:19:39,776 | INFO     | cpuconsumptiontime: 233433 s
[2025-11-24 07:30:22] 2025-11-24 06:19:39,776 | INFO     | nevents: 1000
[2025-11-24 07:30:22] 2025-11-24 06:19:39,776 | INFO     | neventsw: 0
[2025-11-24 07:30:22] 2025-11-24 06:19:39,776 | INFO     | pid: 1987601
[2025-11-24 07:30:22] 2025-11-24 06:19:39,777 | INFO     | pgrp: 1987601
[2025-11-24 07:30:22] 2025-11-24 06:19:39,777 | INFO     | corecount: 4
[2025-11-24 07:30:22] 2025-11-24 06:19:39,777 | INFO     | event service: False
[2025-11-24 07:30:22] 2025-11-24 06:19:39,777 | INFO     | sizes: {0: 2298585, 1: 2298840, 8: 2299102, 12: 2299130, 60175: 2354024, 60176: 2354023, 60180: 2363225, 60182: 2363281, 60189: 2363527}
[2025-11-24 07:30:22] 2025-11-24 06:19:39,777 | INFO     | --------------------------------------------------
[2025-11-24 07:30:22] 2025-11-24 06:19:39,777 | INFO     | 
[2025-11-24 07:30:22] 2025-11-24 06:19:39,777 | INFO     | executing command: ls -lF /scratch/boinc/var/slot116/slots/0
[2025-11-24 07:30:22] 2025-11-24 06:19:39,809 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 07:30:22] 2025-11-24 06:19:39,809 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 07:30:22] 2025-11-24 06:19:39,809 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 07:30:22] 2025-11-24 06:19:39,809 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 07:30:22] 2025-11-24 06:19:39,809 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 07:30:22] 2025-11-24 06:19:39,809 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 07:30:22] 2025-11-24 06:19:39,810 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 07:30:22] 2025-11-24 06:19:39,810 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 07:30:22] 2025-11-24 06:19:39,810 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 07:30:22] 2025-11-24 06:19:39,810 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 07:30:22] 2025-11-24 06:19:39,810 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 07:30:22] 2025-11-24 06:19:39,810 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 07:30:22] 2025-11-24 06:19:39,810 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 07:30:22] 2025-11-24 06:19:39,810 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 07:30:22] 2025-11-24 06:19:39,810 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 07:30:22] 2025-11-24 06:19:39,810 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 07:30:22] 2025-11-24 06:19:39,810 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 07:30:22] 2025-11-24 06:19:39,811 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 07:30:22] 2025-11-24 06:19:39,811 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 07:30:22] 2025-11-24 06:19:39,811 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 07:30:22] 2025-11-24 06:19:39,811 | INFO     | job 6893848585 has completed (purged errors)
[2025-11-24 07:30:22] 2025-11-24 06:19:39,811 | INFO     | overall cleanup function is called
[2025-11-24 07:30:22] 2025-11-24 06:19:40,828 | INFO     | --- collectZombieJob: --- 10, [1987601]
[2025-11-24 07:30:22] 2025-11-24 06:19:40,828 | INFO     | zombie collector waiting for pid 1987601
[2025-11-24 07:30:22] 2025-11-24 06:19:40,828 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 07:30:22] 2025-11-24 06:19:40,828 | INFO     | collected zombie processes
[2025-11-24 07:30:22] 2025-11-24 06:19:40,828 | INFO     | will attempt to kill all subprocesses of pid=1987601
[2025-11-24 07:30:22] 2025-11-24 06:19:41,655 | INFO     | process IDs to be killed: [1987601] (in reverse order)
[2025-11-24 07:30:22] 2025-11-24 06:19:41,937 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 07:30:22] 2025-11-24 06:19:41,938 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 07:30:22] 2025-11-24 06:19:41,968 | INFO     | did not find any defunct processes belonging to 1987601
[2025-11-24 07:30:22] 2025-11-24 06:19:41,997 | INFO     | did not find any defunct processes belonging to 1987601
[2025-11-24 07:30:22] 2025-11-24 06:19:41,999 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 07:30:22] 2025-11-24 06:19:41,999 | INFO     | ready for new job
[2025-11-24 07:30:22] 2025-11-24 06:19:41,999 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 07:30:22] 2025-11-24 06:19:42,006 | INFO     | ***************************************
[2025-11-24 07:30:22] 2025-11-24 06:19:42,009 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 07:30:22] 2025-11-24 06:19:42,009 | INFO     | ***************************************
[2025-11-24 07:30:22] 2025-11-24 06:19:42,009 | INFO     | 
[2025-11-24 07:30:22] 2025-11-24 06:19:42,018 | INFO     | architecture information:
[2025-11-24 07:30:22] 2025-11-24 06:19:42,019 | INFO     | executing command: cat /etc/os-release
[2025-11-24 07:30:22] 2025-11-24 06:19:42,044 | INFO     | cat /etc/os-release:
[2025-11-24 07:30:22] NAME="CentOS Linux"
[2025-11-24 07:30:22] VERSION="7 (Core)"
[2025-11-24 07:30:22] ID="centos"
[2025-11-24 07:30:22] ID_LIKE="rhel fedora"
[2025-11-24 07:30:22] VERSION_ID="7"
[2025-11-24 07:30:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 07:30:22] ANSI_COLOR="0;31"
[2025-11-24 07:30:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 07:30:22] HOME_URL="https://www.centos.org/"
[2025-11-24 07:30:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 07:30:22] 
[2025-11-24 07:30:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 07:30:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 07:30:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 07:30:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 07:30:22] 
[2025-11-24 07:30:22] 2025-11-24 06:19:42,045 | INFO     | ***************************************
[2025-11-24 07:30:22] 2025-11-24 06:19:42,547 | INFO     | executing command: df -mP /scratch/boinc/var/slot116/slots/0
[2025-11-24 07:30:22] 2025-11-24 06:19:42,567 | INFO     | sufficient remaining disk space (3300009181184 B)
[2025-11-24 07:30:22] 2025-11-24 06:19:42,567 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 07:30:22] 2025-11-24 06:19:42,567 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 07:30:22] 2025-11-24 06:19:42,567 | INFO     | update_server=False
[2025-11-24 07:30:22] 2025-11-24 06:19:42,567 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 07:30:22] 2025-11-24 06:19:42,568 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 07:30:22] 2025-11-24 06:19:42,772 | INFO     | all data control threads have been joined
[2025-11-24 07:30:22] 2025-11-24 06:19:42,872 | INFO     | all payload control threads have been joined
[2025-11-24 07:30:22] 2025-11-24 06:19:43,108 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 07:30:22] 2025-11-24 06:19:43,108 | INFO     | aborting loop
[2025-11-24 07:30:22] 2025-11-24 06:19:43,238 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 07:30:22] 2025-11-24 06:19:43,572 | INFO     | [job] retrieve thread has finished
[2025-11-24 07:30:22] 2025-11-24 06:19:43,586 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 07:30:22] 2025-11-24 06:19:43,612 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 07:30:22] 2025-11-24 06:19:43,613 | INFO     | all job control threads have been joined
[2025-11-24 07:30:22] 2025-11-24 06:19:43,778 | INFO     | [data] control thread has finished
[2025-11-24 07:30:22] 2025-11-24 06:19:43,817 | INFO     | [payload] validate_post thread has finished
[2025-11-24 07:30:22] 2025-11-24 06:19:43,878 | INFO     | [payload] control thread has finished
[2025-11-24 07:30:22] 2025-11-24 06:19:44,084 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 07:30:22] 2025-11-24 06:19:44,113 | INFO     | [job] job monitor thread has finished
[2025-11-24 07:30:22] 2025-11-24 06:19:44,117 | INFO     | [data] copytool_in thread has finished
[2025-11-24 07:30:22] 2025-11-24 06:19:44,368 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 07:30:22] 2025-11-24 06:19:44,573 | INFO     | [data] copytool_out thread has finished
[2025-11-24 07:30:22] 2025-11-24 06:19:44,618 | INFO     | [job] control thread has finished
[2025-11-24 07:30:22] 2025-11-24 06:19:44,716 | INFO     | [payload] failed_post thread has finished
[2025-11-24 07:30:22] 2025-11-24 06:19:44,785 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 07:30:22] 2025-11-24 06:19:44,795 | INFO     | [job] validate thread has finished
[2025-11-24 07:30:22] 2025-11-24 06:19:45,790 | INFO     | [job] queue monitor thread has finished
[2025-11-24 07:30:22] 2025-11-24 06:19:47,249 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 07:30:22] 2025-11-24 06:19:54,214 | INFO     | [monitor] cgroup control has ended
[2025-11-24 07:30:22] 2025-11-24 06:19:56,179 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22668936132416)>', '<ExcThread(monitor, started 22668480829184)>']
[2025-11-24 07:30:22] 2025-11-24 06:20:01,204 | INFO     | all workflow threads have been joined
[2025-11-24 07:30:22] 2025-11-24 06:20:01,204 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 07:30:22] 2025-11-24 06:20:01,204 | INFO     | traces error code: 0
[2025-11-24 07:30:22] 2025-11-24 06:20:01,205 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 07:30:22] 2025-11-24 06:20:13,346 | INFO     | PID=1971589 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 07:30:22] 2025-11-24 06:20:13,347 | INFO     | .. there are 11 such processes running
[2025-11-24 07:30:22] 2025-11-24 06:20:13,347 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 07:30:22] 2025-11-24 06:20:13,348 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 07:30:22] 2025-11-24 06:20:13,348 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 07:30:22] 2025-11-24 06:20:13,348 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 07:30:22] 2025-11-24 06:20:13,348 | CRITICAL | thread 'MainThread' is not alive
[2025-11-24 07:30:22] 2025-11-24 06:20:13,348 | INFO     | [monitor] control thread has ended
[2025-11-24 07:30:22] 2025-11-24 06:20:13,503 [wrapper] ==== pilot stdout END ====
[2025-11-24 07:30:22] 2025-11-24 06:20:13,506 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 07:30:22] 2025-11-24 06:20:13,509 [wrapper] pilotpid: 1971589
[2025-11-24 07:30:22] 2025-11-24 06:20:13,512 [wrapper] Pilot exit status: 0
[2025-11-24 07:30:22] 2025-11-24 06:20:13,525 [wrapper] pandaids: 6893848585
[2025-11-24 07:30:22] 2025-11-24 06:20:13,718 [wrapper] cleanup supervisor_pilot 3720963 1971590
[2025-11-24 07:30:22] 2025-11-24 06:20:13,722 [wrapper] Test setup, not cleaning
[2025-11-24 07:30:22] 2025-11-24 06:20:13,726 [wrapper] apfmon messages muted
[2025-11-24 07:30:22] 2025-11-24 06:20:13,730 [wrapper] ==== wrapper stdout END ====
[2025-11-24 07:30:22] 2025-11-24 06:20:13,733 [wrapper] ==== wrapper stderr END ====
[2025-11-24 07:30:22]  *** Error codes and diagnostics ***
[2025-11-24 07:30:22]     "exeErrorCode": 0,
[2025-11-24 07:30:22]     "exeErrorDiag": "",
[2025-11-24 07:30:22]     "pilotErrorCode": 0,
[2025-11-24 07:30:22]     "pilotErrorDiag": "",
[2025-11-24 07:30:22]  *** Listing of results directory ***
[2025-11-24 07:30:22] total 1314636
[2025-11-24 07:30:22] -rw-r--r-- 1 boinc boinc    576529 Nov 20 11:06 pilot3.tar.gz
[2025-11-24 07:30:22] -rw-r--r-- 1 boinc boinc      5112 Nov 20 11:44 queuedata.json
[2025-11-24 07:30:22] -rwx------ 1 boinc boinc     36292 Nov 20 11:44 runpilot2-wrapper.sh
[2025-11-24 07:30:22] -rw-r--r-- 1 boinc boinc       100 Nov 23 14:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 07:30:22] -rwxr-xr-x 1 boinc boinc      7986 Nov 23 14:35 run_atlas
[2025-11-24 07:30:22] -rw-r--r-- 1 boinc boinc       105 Nov 23 14:35 job.xml
[2025-11-24 07:30:22] -rw-r--r-- 1 boinc boinc      6688 Nov 23 14:35 init_data.xml
[2025-11-24 07:30:22] -rw-r--r-- 2 boinc boinc 409024911 Nov 23 14:35 EVNT.47493127._000281.pool.root.1
[2025-11-24 07:30:22] -rw-r--r-- 2 boinc boinc     15847 Nov 23 14:35 start_atlas.sh
[2025-11-24 07:30:22] drwxrwx--x 2 boinc boinc      4096 Nov 23 14:35 shared
[2025-11-24 07:30:22] -rw-r--r-- 2 boinc boinc    590098 Nov 23 14:35 input.tar.gz
[2025-11-24 07:30:22] -rw-r--r-- 1 boinc boinc         0 Nov 23 14:35 boinc_lockfile
[2025-11-24 07:30:22] -rw-r--r-- 1 boinc boinc      2782 Nov 23 14:35 pandaJob.out
[2025-11-24 07:30:22] -rw------- 1 boinc boinc    989785 Nov 23 14:36 agis_schedconf.cvmfs.json
[2025-11-24 07:30:22] drwx------ 5 boinc boinc      4096 Nov 23 14:36 pilot3
[2025-11-24 07:30:22] -rw-r--r-- 1 boinc boinc       531 Nov 24 07:11 boinc_task_state.xml
[2025-11-24 07:30:22] -rw------- 1 boinc boinc 913504892 Nov 24 07:18 HITS.47523449._002801.pool.root.1
[2025-11-24 07:30:22] -rw------- 1 boinc boinc      1039 Nov 24 07:19 memory_monitor_summary.json
[2025-11-24 07:30:22] -rw------- 1 boinc boinc   1526164 Nov 24 07:19 agis_ddmendpoints.agis.ALL.json
[2025-11-24 07:30:22] -rw------- 1 boinc boinc   1699182 Nov 24 07:19 log.47523449._002801.job.log.tgz.1
[2025-11-24 07:30:22] -rw------- 1 boinc boinc      8600 Nov 24 07:19 heartbeat.json
[2025-11-24 07:30:22] -rw------- 1 boinc boinc        95 Nov 24 07:20 pilot_heartbeat.json
[2025-11-24 07:30:22] -rw------- 1 boinc boinc       893 Nov 24 07:20 pilotlog.txt
[2025-11-24 07:30:22] -rw------- 1 boinc boinc   8173992 Nov 24 07:20 log.47523449._002801.job.log.1
[2025-11-24 07:30:22] -rw------- 1 boinc boinc       353 Nov 24 07:20 output.list
[2025-11-24 07:30:22] -rw-r--r-- 1 boinc boinc       620 Nov 24 07:20 runtime_log
[2025-11-24 07:30:22] -rw------- 1 boinc boinc   9891840 Nov 24 07:20 result.tar.gz
[2025-11-24 07:30:22] -rw-r--r-- 1 boinc boinc      9223 Nov 24 07:20 runtime_log.err
[2025-11-24 07:30:22] -rw------- 1 boinc boinc       671 Nov 24 07:20 kYrKDmmKHg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmOXHKDm8c420m.diag
[2025-11-24 07:30:22] -rw-r--r-- 1 boinc boinc        28 Nov 24 07:30 wrapper_checkpoint.txt
[2025-11-24 07:30:22] -rw-r--r-- 1 boinc boinc      8192 Nov 24 07:30 boinc_mmap_file
[2025-11-24 07:30:22] -rw-r--r-- 1 boinc boinc     16501 Nov 24 07:30 stderr.txt
[2025-11-24 07:30:22] HITS file was successfully produced:
[2025-11-24 07:30:22] -rw------- 1 boinc boinc 913504892 Nov 24 07:18 shared/HITS.pool.root.1
[2025-11-24 07:30:22]  *** Contents of shared directory: ***
[2025-11-24 07:30:22] total 1301800
[2025-11-24 07:30:22] -rw-r--r-- 2 boinc boinc 409024911 Nov 23 14:35 ATLAS.root_0
[2025-11-24 07:30:22] -rw-r--r-- 2 boinc boinc     15847 Nov 23 14:35 start_atlas.sh
[2025-11-24 07:30:22] -rw-r--r-- 2 boinc boinc    590098 Nov 23 14:35 input.tar.gz
[2025-11-24 07:30:22] -rw------- 1 boinc boinc 913504892 Nov 24 07:18 HITS.pool.root.1
[2025-11-24 07:30:22] -rw------- 1 boinc boinc   9891840 Nov 24 07:20 result.tar.gz
07:30:24 (1965750): run_atlas exited; CPU time 236306.738938
07:30:24 (1965750): called boinc_finish(0)

</stderr_txt>
]]>

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