Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:53:02 (21894): wrapper (7.7.26015): starting
17:53:02 (21894): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 17:53:02] Arguments: --nthreads 8
[2025-11-20 17:53:02] Threads: 8
[2025-11-20 17:53:02] Checking for CVMFS
[2025-11-20 17:53:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 17:53:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 17:53:02] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 17:53:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 17:53:02] 2.11.2.0 2790 62426 80904 153098 1 81 11708135 20275200 1 130560 0 16489444 99.933 2973521 27603 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-20 17:53:02] CVMFS is ok
[2025-11-20 17:53:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 17:53:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 17:53:02] Further information can be found at the LHC@home message board.
[2025-11-20 17:53:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 17:53:02] Checking for apptainer binary...
[2025-11-20 17:53:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 17:53:02] Running /usr/bin/apptainer --version
[2025-11-20 17:53:02] apptainer version 1.3.2-1.el7
[2025-11-20 17:53:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 17:53:04] c-204-12.aglt2.org
[2025-11-20 17:53:04] apptainer works
[2025-11-20 17:53:04] Set ATHENA_PROC_NUMBER=8
[2025-11-20 17:53:04] Set ATHENA_CORE_NUMBER=8
[2025-11-20 17:53:04] Starting ATLAS job with PandaID=6893860352
[2025-11-20 17:53:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 06:29:44]  *** The last 200 lines of the pilot log: ***
[2025-11-21 06:29:44] 2025-11-21 11:29:01,852 | INFO     | time since job start (45340s) is within the limit (172800.0s)
[2025-11-21 06:29:44] 2025-11-21 11:29:03,536 | INFO     | monitor loop #3342: job 0:6893860352 is in state 'finished'
[2025-11-21 06:29:44] 2025-11-21 11:29:03,536 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 06:29:44] 2025-11-21 11:29:03,855 | INFO     | time since job start (45342s) is within the limit (172800.0s)
[2025-11-21 06:29:44] 2025-11-21 11:29:04,930 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-21 06:29:44] 2025-11-21 11:29:04,934 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1679.25
[2025-11-21 06:29:44] 2025-11-21 11:29:04,936 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6893860352/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 06:29:44] 2025-11-21 11:29:04,937 | INFO     | extracted standard info from prmon json
[2025-11-21 06:29:44] 2025-11-21 11:29:04,937 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 06:29:44] 2025-11-21 11:29:04,937 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 06:29:44] 2025-11-21 11:29:04,949 | INFO     | fitting pss+swap vs Time
[2025-11-21 06:29:44] 2025-11-21 11:29:04,950 | INFO     | sum of square deviations: 127186850803.57188
[2025-11-21 06:29:44] 2025-11-21 11:29:04,961 | INFO     | sum of deviations: 932409784929.913
[2025-11-21 06:29:44] 2025-11-21 11:29:04,961 | INFO     | mean x: 1763701865.515478
[2025-11-21 06:29:44] 2025-11-21 11:29:04,961 | INFO     | mean y: 2865291.4858681024
[2025-11-21 06:29:44] 2025-11-21 11:29:04,962 | INFO     | intersect: -12926874431.730783
[2025-11-21 06:29:44] 2025-11-21 11:29:04,962 | INFO     | chi2: 4.956504362221562
[2025-11-21 06:29:44] 2025-11-21 11:29:04,963 | INFO     | sum of square deviations: 124636491889.7343
[2025-11-21 06:29:44] 2025-11-21 11:29:04,974 | INFO     | sum of deviations: 1147991116726.9739
[2025-11-21 06:29:44] 2025-11-21 11:29:04,975 | INFO     | mean x: 1763701713.0189703
[2025-11-21 06:29:44] 2025-11-21 11:29:04,975 | INFO     | mean y: 2878176.3590785908
[2025-11-21 06:29:44] 2025-11-21 11:29:04,975 | INFO     | intersect: -16242074392.533709
[2025-11-21 06:29:44] 2025-11-21 11:29:04,976 | INFO     | chi2: 2.4832004466036866
[2025-11-21 06:29:44] 2025-11-21 11:29:04,976 | INFO     | current chi2=2.4832004466036866 (change=49.900166223384744 %)
[2025-11-21 06:29:44] 2025-11-21 11:29:04,977 | INFO     | sum of square deviations: 122120414426.92227
[2025-11-21 06:29:44] 2025-11-21 11:29:04,987 | INFO     | sum of deviations: 1204981240051.9678
[2025-11-21 06:29:44] 2025-11-21 11:29:04,988 | INFO     | mean x: 1763701560.521146
[2025-11-21 06:29:44] 2025-11-21 11:29:04,988 | INFO     | mean y: 2881621.2278308324
[2025-11-21 06:29:44] 2025-11-21 11:29:04,988 | INFO     | intersect: -17399837682.10464
[2025-11-21 06:29:44] 2025-11-21 11:29:04,989 | INFO     | chi2: 2.143973806959895
[2025-11-21 06:29:44] 2025-11-21 11:29:04,989 | INFO     | current chi2=2.143973806959895 (change=13.660864152459279 %)
[2025-11-21 06:29:44] 2025-11-21 11:29:04,989 | INFO     | right removable region: 732
[2025-11-21 06:29:44] 2025-11-21 11:29:04,990 | INFO     | sum of square deviations: 124636258259.73433
[2025-11-21 06:29:44] 2025-11-21 11:29:05,001 | INFO     | sum of deviations: 742670393407.3046
[2025-11-21 06:29:44] 2025-11-21 11:29:05,001 | INFO     | mean x: 1763702018.0189703
[2025-11-21 06:29:44] 2025-11-21 11:29:05,001 | INFO     | mean y: 2876616.978319783
[2025-11-21 06:29:44] 2025-11-21 11:29:05,001 | INFO     | intersect: -10506499144.654062
[2025-11-21 06:29:44] 2025-11-21 11:29:05,002 | INFO     | chi2: 2.9925307101071947
[2025-11-21 06:29:44] 2025-11-21 11:29:05,002 | INFO     | current chi2=2.9925307101071947 (change=39.624168740448596 %)
[2025-11-21 06:29:44] 2025-11-21 11:29:05,003 | INFO     | sum of square deviations: 122119991940.87862
[2025-11-21 06:29:44] 2025-11-21 11:29:05,014 | INFO     | sum of deviations: 702344648552.6165
[2025-11-21 06:29:44] 2025-11-21 11:29:05,014 | INFO     | mean x: 1763702170.5225103
[2025-11-21 06:29:44] 2025-11-21 11:29:05,014 | INFO     | mean y: 2879059.4474761253
[2025-11-21 06:29:44] 2025-11-21 11:29:05,014 | INFO     | intersect: -10140642582.011677
[2025-11-21 06:29:44] 2025-11-21 11:29:05,015 | INFO     | chi2: 2.9622106318490604
[2025-11-21 06:29:44] 2025-11-21 11:29:05,015 | INFO     | current chi2=2.9622106318490604 (change=1.0131918832354516 %)
[2025-11-21 06:29:44] 2025-11-21 11:29:05,015 | INFO     | left removable region: 20
[2025-11-21 06:29:44] 2025-11-21 11:29:05,016 | INFO     | sum of square deviations: 111921957828.49297
[2025-11-21 06:29:44] 2025-11-21 11:29:05,026 | INFO     | sum of deviations: 913857763697.8137
[2025-11-21 06:29:44] 2025-11-21 11:29:05,026 | INFO     | mean x: 1763702140.0266855
[2025-11-21 06:29:44] 2025-11-21 11:29:05,027 | INFO     | mean y: 2899319.0098314607
[2025-11-21 06:29:44] 2025-11-21 11:29:05,027 | INFO     | intersect: -14397964682.8841
[2025-11-21 06:29:44] 2025-11-21 11:29:05,028 | INFO     | chi2: 0.12419641847950232
[2025-11-21 06:29:44] 2025-11-21 11:29:05,028 | INFO     | current memory leak: 8.17 B/s (using 712 data points, chi2=0.12)
[2025-11-21 06:29:44] 2025-11-21 11:29:05,028 | INFO     | could have reported an average CPU frequency of 2173 MHz (28 samples)
[2025-11-21 06:29:44] 2025-11-21 11:29:05,028 | INFO     | ..............................
[2025-11-21 06:29:44] 2025-11-21 11:29:05,029 | INFO     | . Timing measurements:
[2025-11-21 06:29:44] 2025-11-21 11:29:05,029 | INFO     | . get job = 0 s
[2025-11-21 06:29:44] 2025-11-21 11:29:05,029 | INFO     | . initial setup = 2 s
[2025-11-21 06:29:44] 2025-11-21 11:29:05,029 | INFO     | . payload setup = 9 s
[2025-11-21 06:29:44] 2025-11-21 11:29:05,029 | INFO     | . stage-in = 0 s
[2025-11-21 06:29:44] 2025-11-21 11:29:05,029 | INFO     | . payload execution = 45302 s
[2025-11-21 06:29:44] 2025-11-21 11:29:05,029 | INFO     | . stage-out = 3 s
[2025-11-21 06:29:44] 2025-11-21 11:29:05,029 | INFO     | . log creation = 0 s
[2025-11-21 06:29:44] 2025-11-21 11:29:05,029 | INFO     | ..............................
[2025-11-21 06:29:44] 2025-11-21 11:29:05,122 | INFO     | 
[2025-11-21 06:29:44] 2025-11-21 11:29:05,122 | INFO     | job summary report
[2025-11-21 06:29:44] 2025-11-21 11:29:05,122 | INFO     | --------------------------------------------------
[2025-11-21 06:29:44] 2025-11-21 11:29:05,122 | INFO     | PanDA job id: 6893860352
[2025-11-21 06:29:44] 2025-11-21 11:29:05,122 | INFO     | task id: 47523449
[2025-11-21 06:29:44] 2025-11-21 11:29:05,123 | INFO     | errors: (none)
[2025-11-21 06:29:44] 2025-11-21 11:29:05,123 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 06:29:44] 2025-11-21 11:29:05,123 | INFO     | pilot state: finished 
[2025-11-21 06:29:44] 2025-11-21 11:29:05,123 | INFO     | transexitcode: 0
[2025-11-21 06:29:44] 2025-11-21 11:29:05,123 | INFO     | exeerrorcode: 0
[2025-11-21 06:29:44] 2025-11-21 11:29:05,124 | INFO     | exeerrordiag: 
[2025-11-21 06:29:44] 2025-11-21 11:29:05,124 | INFO     | exitcode: 0
[2025-11-21 06:29:44] 2025-11-21 11:29:05,124 | INFO     | exitmsg: OK
[2025-11-21 06:29:44] 2025-11-21 11:29:05,124 | INFO     | cpuconsumptiontime: 351084 s
[2025-11-21 06:29:44] 2025-11-21 11:29:05,124 | INFO     | nevents: 1000
[2025-11-21 06:29:44] 2025-11-21 11:29:05,124 | INFO     | neventsw: 0
[2025-11-21 06:29:44] 2025-11-21 11:29:05,125 | INFO     | pid: 31932
[2025-11-21 06:29:44] 2025-11-21 11:29:05,125 | INFO     | pgrp: 31932
[2025-11-21 06:29:44] 2025-11-21 11:29:05,125 | INFO     | corecount: 8
[2025-11-21 06:29:44] 2025-11-21 11:29:05,125 | INFO     | event service: False
[2025-11-21 06:29:44] 2025-11-21 11:29:05,125 | INFO     | sizes: {0: 2298636, 1: 2298835, 6: 2299097, 11: 2299125, 45315: 2345191, 45319: 2354185, 45320: 2354397, 45326: 2354643}
[2025-11-21 06:29:44] 2025-11-21 11:29:05,125 | INFO     | --------------------------------------------------
[2025-11-21 06:29:44] 2025-11-21 11:29:05,125 | INFO     | 
[2025-11-21 06:29:44] 2025-11-21 11:29:05,126 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-21 06:29:44] 2025-11-21 11:29:05,153 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 06:29:44] 2025-11-21 11:29:05,154 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 06:29:44] 2025-11-21 11:29:05,154 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 06:29:44] 2025-11-21 11:29:05,154 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 06:29:44] 2025-11-21 11:29:05,154 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 06:29:44] 2025-11-21 11:29:05,154 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 06:29:44] 2025-11-21 11:29:05,155 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 06:29:44] 2025-11-21 11:29:05,155 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 06:29:44] 2025-11-21 11:29:05,155 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 06:29:44] 2025-11-21 11:29:05,155 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 06:29:44] 2025-11-21 11:29:05,155 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 06:29:44] 2025-11-21 11:29:05,155 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 06:29:44] 2025-11-21 11:29:05,156 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 06:29:44] 2025-11-21 11:29:05,156 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 06:29:44] 2025-11-21 11:29:05,156 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 06:29:44] 2025-11-21 11:29:05,156 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 06:29:44] 2025-11-21 11:29:05,156 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 06:29:44] 2025-11-21 11:29:05,156 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 06:29:44] 2025-11-21 11:29:05,157 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 06:29:44] 2025-11-21 11:29:05,157 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 06:29:44] 2025-11-21 11:29:05,157 | INFO     | job 6893860352 has completed (purged errors)
[2025-11-21 06:29:44] 2025-11-21 11:29:05,157 | INFO     | overall cleanup function is called
[2025-11-21 06:29:44] 2025-11-21 11:29:06,171 | INFO     | --- collectZombieJob: --- 10, [31932]
[2025-11-21 06:29:44] 2025-11-21 11:29:06,171 | INFO     | zombie collector waiting for pid 31932
[2025-11-21 06:29:44] 2025-11-21 11:29:06,172 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 06:29:44] 2025-11-21 11:29:06,172 | INFO     | collected zombie processes
[2025-11-21 06:29:44] 2025-11-21 11:29:06,172 | INFO     | will attempt to kill all subprocesses of pid=31932
[2025-11-21 06:29:44] 2025-11-21 11:29:06,263 | INFO     | process IDs to be killed: [31932] (in reverse order)
[2025-11-21 06:29:44] 2025-11-21 11:29:06,323 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 06:29:44] 2025-11-21 11:29:06,324 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 06:29:44] 2025-11-21 11:29:06,328 | INFO     | did not find any defunct processes belonging to 31932
[2025-11-21 06:29:44] 2025-11-21 11:29:06,331 | INFO     | did not find any defunct processes belonging to 31932
[2025-11-21 06:29:44] 2025-11-21 11:29:06,333 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 06:29:44] 2025-11-21 11:29:06,334 | INFO     | ready for new job
[2025-11-21 06:29:44] 2025-11-21 11:29:06,334 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 06:29:44] 2025-11-21 11:29:06,338 | INFO     | ***************************************
[2025-11-21 06:29:44] 2025-11-21 11:29:06,338 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 06:29:44] 2025-11-21 11:29:06,338 | INFO     | ***************************************
[2025-11-21 06:29:44] 2025-11-21 11:29:06,338 | INFO     | 
[2025-11-21 06:29:44] 2025-11-21 11:29:06,339 | INFO     | architecture information:
[2025-11-21 06:29:44] 2025-11-21 11:29:06,340 | INFO     | executing command: cat /etc/os-release
[2025-11-21 06:29:44] 2025-11-21 11:29:06,357 | INFO     | cat /etc/os-release:
[2025-11-21 06:29:44] NAME="CentOS Linux"
[2025-11-21 06:29:44] VERSION="7 (Core)"
[2025-11-21 06:29:44] ID="centos"
[2025-11-21 06:29:44] ID_LIKE="rhel fedora"
[2025-11-21 06:29:44] VERSION_ID="7"
[2025-11-21 06:29:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 06:29:44] ANSI_COLOR="0;31"
[2025-11-21 06:29:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 06:29:44] HOME_URL="https://www.centos.org/"
[2025-11-21 06:29:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 06:29:44] 
[2025-11-21 06:29:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 06:29:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 06:29:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 06:29:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 06:29:44] 
[2025-11-21 06:29:44] 2025-11-21 11:29:06,358 | INFO     | ***************************************
[2025-11-21 06:29:44] 2025-11-21 11:29:06,861 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-21 06:29:44] 2025-11-21 11:29:06,881 | INFO     | sufficient remaining disk space (17475567616 B)
[2025-11-21 06:29:44] 2025-11-21 11:29:06,882 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 06:29:44] 2025-11-21 11:29:06,882 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 06:29:44] 2025-11-21 11:29:06,882 | INFO     | update_server=False
[2025-11-21 06:29:44] 2025-11-21 11:29:06,883 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 06:29:44] 2025-11-21 11:29:06,883 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 06:29:44] 2025-11-21 11:29:06,883 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 06:29:44] 2025-11-21 11:29:07,042 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 06:29:44] 2025-11-21 11:29:07,042 | INFO     | aborting loop
[2025-11-21 06:29:44] 2025-11-21 11:29:07,750 | INFO     | all payload control threads have been joined
[2025-11-21 06:29:44] 2025-11-21 11:29:07,888 | INFO     | [job] retrieve thread has finished
[2025-11-21 06:29:44] 2025-11-21 11:29:07,889 | INFO     | [job] queue monitor thread has finished
[2025-11-21 06:29:44] 2025-11-21 11:29:07,904 | INFO     | all data control threads have been joined
[2025-11-21 06:29:44] 2025-11-21 11:29:07,942 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 06:29:44] 2025-11-21 11:29:08,015 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 06:29:44] 2025-11-21 11:29:08,048 | INFO     | [job] job monitor thread has finished
[2025-11-21 06:29:44] 2025-11-21 11:29:08,095 | INFO     | [payload] validate_post thread has finished
[2025-11-21 06:29:44] 2025-11-21 11:29:08,097 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 06:29:44] 2025-11-21 11:29:08,235 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 06:29:44] 2025-11-21 11:29:08,487 | INFO     | all job control threads have been joined
[2025-11-21 06:29:44] 2025-11-21 11:29:08,609 | INFO     | [job] validate thread has finished
[2025-11-21 06:29:44] 2025-11-21 11:29:08,754 | INFO     | [payload] control thread has finished
[2025-11-21 06:29:44] 2025-11-21 11:29:08,889 | INFO     | [data] copytool_out thread has finished
[2025-11-21 06:29:44] 2025-11-21 11:29:08,908 | INFO     | [data] control thread has finished
[2025-11-21 06:29:44] 2025-11-21 11:29:08,986 | INFO     | [data] copytool_in thread has finished
[2025-11-21 06:29:44] 2025-11-21 11:29:09,014 | INFO     | [payload] failed_post thread has finished
[2025-11-21 06:29:44] 2025-11-21 11:29:09,147 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 06:29:44] 2025-11-21 11:29:09,492 | INFO     | [job] control thread has finished
[2025-11-21 06:29:44] 2025-11-21 11:29:13,153 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 06:29:44] 2025-11-21 11:29:36,758 | INFO     | [monitor] cgroup control has ended
[2025-11-21 06:29:44] 2025-11-21 11:29:37,070 | INFO     | PID=25568 has CPU usage=7.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-21 06:29:44] 2025-11-21 11:29:37,071 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 06:29:44] 2025-11-21 11:29:37,071 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 06:29:44] 2025-11-21 11:29:37,071 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 06:29:44] 2025-11-21 11:29:38,697 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139675993405248)>', '<ExcThread(monitor, started 139675381507840)>']
[2025-11-21 06:29:44] 2025-11-21 11:29:39,081 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 06:29:44] 2025-11-21 11:29:39,082 | INFO     | [monitor] control thread has ended
[2025-11-21 06:29:44] 2025-11-21 11:29:43,723 | INFO     | all workflow threads have been joined
[2025-11-21 06:29:44] 2025-11-21 11:29:43,723 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 06:29:44] 2025-11-21 11:29:43,723 | INFO     | traces error code: 0
[2025-11-21 06:29:44] 2025-11-21 11:29:43,724 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 06:29:44] 2025-11-21 11:29:43,828 [wrapper] ==== pilot stdout END ====
[2025-11-21 06:29:44] 2025-11-21 11:29:43,833 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 06:29:44] 2025-11-21 11:29:43,838 [wrapper] pilotpid: 25568
[2025-11-21 06:29:44] 2025-11-21 11:29:43,842 [wrapper] Pilot exit status: 0
[2025-11-21 06:29:44] 2025-11-21 11:29:43,859 [wrapper] pandaids: 6893860352
[2025-11-21 06:29:44] 2025-11-21 11:29:43,905 [wrapper] cleanup supervisor_pilot 27232 25569
[2025-11-21 06:29:44] 2025-11-21 11:29:43,909 [wrapper] Test setup, not cleaning
[2025-11-21 06:29:44] 2025-11-21 11:29:43,914 [wrapper] apfmon messages muted
[2025-11-21 06:29:44] 2025-11-21 11:29:43,918 [wrapper] ==== wrapper stdout END ====
[2025-11-21 06:29:44] 2025-11-21 11:29:43,923 [wrapper] ==== wrapper stderr END ====
[2025-11-21 06:29:44]  *** Error codes and diagnostics ***
[2025-11-21 06:29:44]     "exeErrorCode": 0,
[2025-11-21 06:29:44]     "exeErrorDiag": "",
[2025-11-21 06:29:44]     "pilotErrorCode": 0,
[2025-11-21 06:29:44]     "pilotErrorDiag": "",
[2025-11-21 06:29:44]  *** Listing of results directory ***
[2025-11-21 06:29:44] total 1314552
[2025-11-21 06:29:44] -rw-r--r-- 1 boincer umatlas    576529 Nov 20 08:12 pilot3.tar.gz
[2025-11-21 06:29:44] -rw-r--r-- 1 boincer umatlas      5112 Nov 20 08:45 queuedata.json
[2025-11-21 06:29:44] -rwx------ 1 boincer umatlas     36292 Nov 20 08:45 runpilot2-wrapper.sh
[2025-11-21 06:29:44] -rw-r--r-- 1 boincer umatlas       100 Nov 20 17:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 06:29:44] -rwxr-xr-x 1 boincer umatlas      7986 Nov 20 17:52 run_atlas
[2025-11-21 06:29:44] -rw-r--r-- 1 boincer umatlas       105 Nov 20 17:52 job.xml
[2025-11-21 06:29:44] -rw-r--r-- 2 boincer umatlas 409397647 Nov 20 17:53 EVNT.47493127._000555.pool.root.1
[2025-11-21 06:29:44] -rw-r--r-- 2 boincer umatlas     15847 Nov 20 17:53 start_atlas.sh
[2025-11-21 06:29:44] drwxrwx--x 2 boincer umatlas      4096 Nov 20 17:53 shared
[2025-11-21 06:29:44] -rw-r--r-- 2 boincer umatlas    590102 Nov 20 17:53 input.tar.gz
[2025-11-21 06:29:44] -rw-r--r-- 1 boincer umatlas         0 Nov 20 17:53 boinc_lockfile
[2025-11-21 06:29:44] -rw-r--r-- 1 boincer umatlas      2786 Nov 20 17:53 pandaJob.out
[2025-11-21 06:29:44] -rw------- 1 boincer umatlas        57 Nov 20 17:53 setup.sh.local
[2025-11-21 06:29:44] -rw------- 1 boincer umatlas    989825 Nov 20 17:53 agis_schedconf.cvmfs.json
[2025-11-21 06:29:44] drwx------ 5 boincer umatlas      4096 Nov 20 17:53 pilot3
[2025-11-21 06:29:44] -rw-r--r-- 1 boincer umatlas       532 Nov 21 06:19 boinc_task_state.xml
[2025-11-21 06:29:44] -rw-r--r-- 1 boincer umatlas      5910 Nov 21 06:27 init_data.xml
[2025-11-21 06:29:44] -rw------- 1 boincer umatlas 916308162 Nov 21 06:28 HITS.47523449._005546.pool.root.1
[2025-11-21 06:29:44] -rw------- 1 boincer umatlas      1061 Nov 21 06:28 memory_monitor_summary.json
[2025-11-21 06:29:44] -rw------- 1 boincer umatlas   1526164 Nov 21 06:28 agis_ddmendpoints.agis.ALL.json
[2025-11-21 06:29:44] -rw------- 1 boincer umatlas   1990103 Nov 21 06:28 log.47523449._005546.job.log.tgz.1
[2025-11-21 06:29:44] -rw------- 1 boincer umatlas      8657 Nov 21 06:29 heartbeat.json
[2025-11-21 06:29:44] -rw-r--r-- 1 boincer umatlas        29 Nov 21 06:29 wrapper_checkpoint.txt
[2025-11-21 06:29:44] -rw-r--r-- 1 boincer umatlas      8192 Nov 21 06:29 boinc_mmap_file
[2025-11-21 06:29:44] -rw------- 1 boincer umatlas        95 Nov 21 06:29 pilot_heartbeat.json
[2025-11-21 06:29:44] -rw------- 1 boincer umatlas      4746 Nov 21 06:29 pilotlog.txt
[2025-11-21 06:29:44] -rw------- 1 boincer umatlas   6246305 Nov 21 06:29 log.47523449._005546.job.log.1
[2025-11-21 06:29:44] -rw------- 1 boincer umatlas       353 Nov 21 06:29 output.list
[2025-11-21 06:29:44] -rw-r--r-- 1 boincer umatlas       620 Nov 21 06:29 runtime_log
[2025-11-21 06:29:44] -rw------- 1 boincer umatlas   8253440 Nov 21 06:29 result.tar.gz
[2025-11-21 06:29:44] -rw-r--r-- 1 boincer umatlas      9343 Nov 21 06:29 runtime_log.err
[2025-11-21 06:29:44] -rw------- 1 boincer umatlas       668 Nov 21 06:29 8HTNDmX9Jg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmxjGKDm1tN7lm.diag
[2025-11-21 06:29:44] -rw-r--r-- 1 boincer umatlas     21321 Nov 21 06:29 stderr.txt
[2025-11-21 06:29:44] HITS file was successfully produced:
[2025-11-21 06:29:44] -rw------- 1 boincer umatlas 916308162 Nov 21 06:28 shared/HITS.pool.root.1
[2025-11-21 06:29:44]  *** Contents of shared directory: ***
[2025-11-21 06:29:44] total 1303304
[2025-11-21 06:29:44] -rw-r--r-- 2 boincer umatlas 409397647 Nov 20 17:53 ATLAS.root_0
[2025-11-21 06:29:44] -rw-r--r-- 2 boincer umatlas     15847 Nov 20 17:53 start_atlas.sh
[2025-11-21 06:29:44] -rw-r--r-- 2 boincer umatlas    590102 Nov 20 17:53 input.tar.gz
[2025-11-21 06:29:44] -rw------- 1 boincer umatlas 916308162 Nov 21 06:28 HITS.pool.root.1
[2025-11-21 06:29:44] -rw------- 1 boincer umatlas   8253440 Nov 21 06:29 result.tar.gz
06:29:45 (21894): run_atlas exited; CPU time 347044.293833
06:29:45 (21894): called boinc_finish(0)

</stderr_txt>
]]>

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