Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
18:26:53 (3006247): wrapper (7.7.26015): starting
18:26:53 (3006247): wrapper: running run_atlas (--nthreads 12)
[2025-11-20 18:26:53] Arguments: --nthreads 12
[2025-11-20 18:26:53] Threads: 12
[2025-11-20 18:26:53] Checking for CVMFS
[2025-11-20 18:26:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 18:26:56] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 18:26:56] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 18:26:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 18:26:56] 2.8.1.0 3006491 0 30228 153101 3 1 3372626 4096001 0 130560 0 0 0.000 1292 1051 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-20 18:26:56] CVMFS is ok
[2025-11-20 18:26:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 18:26:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 18:26:56] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-20 18:26:56] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-20 18:26:56] Further information can be found at the LHC@home message board.
[2025-11-20 18:26:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 18:26:56] Checking for apptainer binary...
[2025-11-20 18:26:56] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-11-20 18:26:56] apptainer is not installed, using version from CVMFS
[2025-11-20 18:26:56] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 18:26:57] farmville.blisteringsheep.pec
[2025-11-20 18:26:57] apptainer works
[2025-11-20 18:26:57] Set ATHENA_PROC_NUMBER=12
[2025-11-20 18:26:57] Set ATHENA_CORE_NUMBER=12
[2025-11-20 18:26:57] Starting ATLAS job with PandaID=6893860175
[2025-11-20 18:26:57] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 22:10:38]  *** The last 200 lines of the pilot log: ***
[2025-11-20 22:10:38] 2025-11-21 03:09:35,948 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-20 22:10:38] 2025-11-21 03:09:37,442 | INFO     | monitor loop #991: job 0:6893860175 is in state 'finished'
[2025-11-20 22:10:38] 2025-11-21 03:09:37,442 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-20 22:10:38] 2025-11-21 03:09:37,890 | INFO     | time since job start (13344s) is within the limit (172800.0s)
[2025-11-20 22:10:38] 2025-11-21 03:09:39,517 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-20 22:10:38] 2025-11-21 03:09:39,521 | INFO     | found 24 cores (12 cores per socket, 2 sockets) HT, CPU MHz: 2512.4380833333335
[2025-11-20 22:10:38] 2025-11-21 03:09:39,525 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6893860175/memory_monitor_summary.json (trf name=prmon)
[2025-11-20 22:10:38] 2025-11-21 03:09:39,526 | INFO     | extracted standard info from prmon json
[2025-11-20 22:10:38] 2025-11-21 03:09:39,526 | INFO     | extracted standard memory fields from prmon json
[2025-11-20 22:10:38] 2025-11-21 03:09:39,526 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 22:10:38] 2025-11-21 03:09:39,528 | INFO     | fitting pss+swap vs Time
[2025-11-20 22:10:38] 2025-11-21 03:09:39,529 | INFO     | sum of square deviations: 3256791028.009126
[2025-11-20 22:10:38] 2025-11-21 03:09:39,529 | INFO     | sum of deviations: 120420745110.21921
[2025-11-20 22:10:38] 2025-11-21 03:09:39,529 | INFO     | mean x: 1763687903.6118722
[2025-11-20 22:10:38] 2025-11-21 03:09:39,529 | INFO     | mean y: 3574246.684931507
[2025-11-20 22:10:38] 2025-11-21 03:09:39,530 | INFO     | intersect: -65209271670.743385
[2025-11-20 22:10:38] 2025-11-21 03:09:39,530 | INFO     | chi2: 4.642641935180934
[2025-11-20 22:10:38] 2025-11-21 03:09:39,530 | INFO     | sum of square deviations: 3038809203.593462
[2025-11-20 22:10:38] 2025-11-21 03:09:39,531 | INFO     | sum of deviations: 197168921666.7105
[2025-11-20 22:10:38] 2025-11-21 03:09:39,531 | INFO     | mean x: 1763687751.1261683
[2025-11-20 22:10:38] 2025-11-21 03:09:39,531 | INFO     | mean y: 3627694.1588785048
[2025-11-20 22:10:38] 2025-11-21 03:09:39,531 | INFO     | intersect: -114430806568.81377
[2025-11-20 22:10:38] 2025-11-21 03:09:39,531 | INFO     | chi2: 2.0409790299572124
[2025-11-20 22:10:38] 2025-11-21 03:09:39,531 | INFO     | current chi2=2.0409790299572124 (change=56.03841393644606 %)
[2025-11-20 22:10:38] 2025-11-21 03:09:39,531 | INFO     | sum of square deviations: 2830741892.889947
[2025-11-20 22:10:38] 2025-11-21 03:09:39,532 | INFO     | sum of deviations: 192648717410.3539
[2025-11-20 22:10:38] 2025-11-21 03:09:39,532 | INFO     | mean x: 1763687598.6267943
[2025-11-20 22:10:38] 2025-11-21 03:09:39,532 | INFO     | mean y: 3624312.7224880382
[2025-11-20 22:10:38] 2025-11-21 03:09:39,532 | INFO     | intersect: -120025741360.4299
[2025-11-20 22:10:38] 2025-11-21 03:09:39,532 | INFO     | chi2: 1.996742937070561
[2025-11-20 22:10:38] 2025-11-21 03:09:39,532 | INFO     | current chi2=1.996742937070561 (change=2.1673957565148916 %)
[2025-11-20 22:10:38] 2025-11-21 03:09:39,533 | INFO     | right removable region: 208
[2025-11-20 22:10:38] 2025-11-21 03:09:39,533 | INFO     | sum of square deviations: 3038727463.593462
[2025-11-20 22:10:38] 2025-11-21 03:09:39,533 | INFO     | sum of deviations: 53834165496.14484
[2025-11-20 22:10:38] 2025-11-21 03:09:39,534 | INFO     | mean x: 1763688056.1261683
[2025-11-20 22:10:38] 2025-11-21 03:09:39,534 | INFO     | mean y: 3620501.920560748
[2025-11-20 22:10:38] 2025-11-21 03:09:39,534 | INFO     | intersect: -31241917584.206608
[2025-11-20 22:10:38] 2025-11-21 03:09:39,534 | INFO     | chi2: 2.745262974814639
[2025-11-20 22:10:38] 2025-11-21 03:09:39,534 | INFO     | current chi2=2.745262974814639 (change=40.86851811655705 %)
[2025-11-20 22:10:38] 2025-11-21 03:09:39,534 | INFO     | sum of square deviations: 2830656492.889947
[2025-11-20 22:10:38] 2025-11-21 03:09:39,535 | INFO     | sum of deviations: 38932417650.13399
[2025-11-20 22:10:38] 2025-11-21 03:09:39,535 | INFO     | mean x: 1763688208.6267943
[2025-11-20 22:10:38] 2025-11-21 03:09:39,535 | INFO     | mean y: 3631396.976076555
[2025-11-20 22:10:38] 2025-11-21 03:09:39,535 | INFO     | intersect: -24253867213.45126
[2025-11-20 22:10:38] 2025-11-21 03:09:39,535 | INFO     | chi2: 2.7131182443935202
[2025-11-20 22:10:38] 2025-11-21 03:09:39,535 | INFO     | current chi2=2.7131182443935202 (change=1.1709162552374164 %)
[2025-11-20 22:10:38] 2025-11-21 03:09:39,535 | INFO     | left removable region: 20
[2025-11-20 22:10:38] 2025-11-21 03:09:39,536 | INFO     | sum of square deviations: 2060258024.4042509
[2025-11-20 22:10:38] 2025-11-21 03:09:39,536 | INFO     | sum of deviations: 89260631562.39363
[2025-11-20 22:10:38] 2025-11-21 03:09:39,536 | INFO     | mean x: 1763688178.1382978
[2025-11-20 22:10:38] 2025-11-21 03:09:39,536 | INFO     | mean y: 3704178.2925531915
[2025-11-20 22:10:38] 2025-11-21 03:09:39,536 | INFO     | intersect: -76408045609.83124
[2025-11-20 22:10:38] 2025-11-21 03:09:39,536 | INFO     | chi2: 0.010747738631191607
[2025-11-20 22:10:38] 2025-11-21 03:09:39,537 | INFO     | current memory leak: 43.32 B/s (using 188 data points, chi2=0.01)
[2025-11-20 22:10:38] 2025-11-21 03:09:39,537 | INFO     | could have reported an average CPU frequency of 2680 MHz (11 samples)
[2025-11-20 22:10:38] 2025-11-21 03:09:39,537 | INFO     | ..............................
[2025-11-20 22:10:38] 2025-11-21 03:09:39,537 | INFO     | . Timing measurements:
[2025-11-20 22:10:38] 2025-11-21 03:09:39,537 | INFO     | . get job = 0 s
[2025-11-20 22:10:38] 2025-11-21 03:09:39,537 | INFO     | . initial setup = 3 s
[2025-11-20 22:10:38] 2025-11-21 03:09:39,537 | INFO     | . payload setup = 3 s
[2025-11-20 22:10:38] 2025-11-21 03:09:39,537 | INFO     | . stage-in = 0 s
[2025-11-20 22:10:38] 2025-11-21 03:09:39,537 | INFO     | . payload execution = 13315 s
[2025-11-20 22:10:38] 2025-11-21 03:09:39,537 | INFO     | . stage-out = 3 s
[2025-11-20 22:10:38] 2025-11-21 03:09:39,537 | INFO     | . log creation = 0 s
[2025-11-20 22:10:38] 2025-11-21 03:09:39,537 | INFO     | ..............................
[2025-11-20 22:10:38] 2025-11-21 03:09:39,587 | INFO     | 
[2025-11-20 22:10:38] 2025-11-21 03:09:39,587 | INFO     | job summary report
[2025-11-20 22:10:38] 2025-11-21 03:09:39,587 | INFO     | --------------------------------------------------
[2025-11-20 22:10:38] 2025-11-21 03:09:39,587 | INFO     | PanDA job id: 6893860175
[2025-11-20 22:10:38] 2025-11-21 03:09:39,587 | INFO     | task id: 47523449
[2025-11-20 22:10:38] 2025-11-21 03:09:39,587 | INFO     | errors: (none)
[2025-11-20 22:10:38] 2025-11-21 03:09:39,587 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 22:10:38] 2025-11-21 03:09:39,588 | INFO     | pilot state: finished 
[2025-11-20 22:10:38] 2025-11-21 03:09:39,588 | INFO     | transexitcode: 0
[2025-11-20 22:10:38] 2025-11-21 03:09:39,588 | INFO     | exeerrorcode: 0
[2025-11-20 22:10:38] 2025-11-21 03:09:39,588 | INFO     | exeerrordiag: 
[2025-11-20 22:10:38] 2025-11-21 03:09:39,588 | INFO     | exitcode: 0
[2025-11-20 22:10:38] 2025-11-21 03:09:39,588 | INFO     | exitmsg: OK
[2025-11-20 22:10:38] 2025-11-21 03:09:39,588 | INFO     | cpuconsumptiontime: 155155 s
[2025-11-20 22:10:38] 2025-11-21 03:09:39,588 | INFO     | nevents: 1000
[2025-11-20 22:10:38] 2025-11-21 03:09:39,588 | INFO     | neventsw: 0
[2025-11-20 22:10:38] 2025-11-21 03:09:39,588 | INFO     | pid: 3018178
[2025-11-20 22:10:38] 2025-11-21 03:09:39,589 | INFO     | pgrp: 3018178
[2025-11-20 22:10:38] 2025-11-21 03:09:39,589 | INFO     | corecount: 12
[2025-11-20 22:10:38] 2025-11-21 03:09:39,589 | INFO     | event service: False
[2025-11-20 22:10:38] 2025-11-21 03:09:39,589 | INFO     | sizes: {0: 2298636, 1: 2298835, 3: 2299097, 11: 2299125, 13322: 2330290, 13326: 2339468, 13332: 2339658}
[2025-11-20 22:10:38] 2025-11-21 03:09:39,589 | INFO     | --------------------------------------------------
[2025-11-20 22:10:38] 2025-11-21 03:09:39,589 | INFO     | 
[2025-11-20 22:10:38] 2025-11-21 03:09:39,589 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-11-20 22:10:38] 2025-11-21 03:09:39,602 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 22:10:38] 2025-11-21 03:09:39,603 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 22:10:38] 2025-11-21 03:09:39,603 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 22:10:38] 2025-11-21 03:09:39,603 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 22:10:38] 2025-11-21 03:09:39,603 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 22:10:38] 2025-11-21 03:09:39,603 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 22:10:38] 2025-11-21 03:09:39,603 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 22:10:38] 2025-11-21 03:09:39,603 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 22:10:38] 2025-11-21 03:09:39,604 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 22:10:38] 2025-11-21 03:09:39,604 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 22:10:38] 2025-11-21 03:09:39,604 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 22:10:38] 2025-11-21 03:09:39,604 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 22:10:38] 2025-11-21 03:09:39,604 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 22:10:38] 2025-11-21 03:09:39,604 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 22:10:38] 2025-11-21 03:09:39,604 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 22:10:38] 2025-11-21 03:09:39,604 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 22:10:38] 2025-11-21 03:09:39,604 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 22:10:38] 2025-11-21 03:09:39,604 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 22:10:38] 2025-11-21 03:09:39,605 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 22:10:38] 2025-11-21 03:09:39,605 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 22:10:38] 2025-11-21 03:09:39,605 | INFO     | job 6893860175 has completed (purged errors)
[2025-11-20 22:10:38] 2025-11-21 03:09:39,605 | INFO     | overall cleanup function is called
[2025-11-20 22:10:38] 2025-11-21 03:09:40,622 | INFO     | --- collectZombieJob: --- 10, [3018178]
[2025-11-20 22:10:38] 2025-11-21 03:09:40,623 | INFO     | zombie collector waiting for pid 3018178
[2025-11-20 22:10:38] 2025-11-21 03:09:40,623 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 22:10:38] 2025-11-21 03:09:40,623 | INFO     | collected zombie processes
[2025-11-20 22:10:38] 2025-11-21 03:09:40,623 | INFO     | will attempt to kill all subprocesses of pid=3018178
[2025-11-20 22:10:38] 2025-11-21 03:09:40,797 | INFO     | process IDs to be killed: [3018178] (in reverse order)
[2025-11-20 22:10:38] 2025-11-21 03:09:40,837 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 22:10:38] 2025-11-21 03:09:40,837 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 22:10:38] 2025-11-21 03:09:40,841 | INFO     | did not find any defunct processes belonging to 3018178
[2025-11-20 22:10:38] 2025-11-21 03:09:40,844 | INFO     | did not find any defunct processes belonging to 3018178
[2025-11-20 22:10:38] 2025-11-21 03:09:40,845 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 22:10:38] 2025-11-21 03:09:40,845 | INFO     | ready for new job
[2025-11-20 22:10:38] 2025-11-21 03:09:40,845 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 22:10:38] 2025-11-21 03:09:40,847 | INFO     | ***************************************
[2025-11-20 22:10:38] 2025-11-21 03:09:40,847 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 22:10:38] 2025-11-21 03:09:40,847 | INFO     | ***************************************
[2025-11-20 22:10:38] 2025-11-21 03:09:40,847 | INFO     | 
[2025-11-20 22:10:38] 2025-11-21 03:09:40,848 | INFO     | architecture information:
[2025-11-20 22:10:38] 2025-11-21 03:09:40,848 | INFO     | executing command: cat /etc/os-release
[2025-11-20 22:10:38] 2025-11-21 03:09:40,858 | INFO     | cat /etc/os-release:
[2025-11-20 22:10:38] NAME="CentOS Linux"
[2025-11-20 22:10:38] VERSION="7 (Core)"
[2025-11-20 22:10:38] ID="centos"
[2025-11-20 22:10:38] ID_LIKE="rhel fedora"
[2025-11-20 22:10:38] VERSION_ID="7"
[2025-11-20 22:10:38] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 22:10:38] ANSI_COLOR="0;31"
[2025-11-20 22:10:38] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 22:10:38] HOME_URL="https://www.centos.org/"
[2025-11-20 22:10:38] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 22:10:38] 
[2025-11-20 22:10:38] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 22:10:38] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 22:10:38] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 22:10:38] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 22:10:38] 
[2025-11-20 22:10:38] 2025-11-21 03:09:40,858 | INFO     | ***************************************
[2025-11-20 22:10:38] 2025-11-21 03:09:41,361 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-11-20 22:10:38] 2025-11-21 03:09:41,371 | INFO     | sufficient remaining disk space (342920003584 B)
[2025-11-20 22:10:38] 2025-11-21 03:09:41,371 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 22:10:38] 2025-11-21 03:09:41,371 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 22:10:38] 2025-11-21 03:09:41,371 | INFO     | update_server=False
[2025-11-20 22:10:38] 2025-11-21 03:09:41,371 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 22:10:38] 2025-11-21 03:09:41,372 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 22:10:38] 2025-11-21 03:09:41,372 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 22:10:38] 2025-11-21 03:09:41,372 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 22:10:38] 2025-11-21 03:09:41,372 | INFO     | aborting loop
[2025-11-20 22:10:38] 2025-11-21 03:09:41,656 | INFO     | all payload control threads have been joined
[2025-11-20 22:10:38] 2025-11-21 03:09:42,207 | INFO     | all data control threads have been joined
[2025-11-20 22:10:38] 2025-11-21 03:09:42,377 | INFO     | [job] retrieve thread has finished
[2025-11-20 22:10:38] 2025-11-21 03:09:42,377 | INFO     | [job] queue monitor thread has finished
[2025-11-20 22:10:38] 2025-11-21 03:09:42,378 | INFO     | [job] job monitor thread has finished
[2025-11-20 22:10:38] 2025-11-21 03:09:42,661 | INFO     | [payload] control thread has finished
[2025-11-20 22:10:38] 2025-11-21 03:09:42,801 | INFO     | [payload] failed_post thread has finished
[2025-11-20 22:10:38] 2025-11-21 03:09:42,924 | INFO     | [job] validate thread has finished
[2025-11-20 22:10:38] 2025-11-21 03:09:43,052 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 22:10:38] 2025-11-21 03:09:43,056 | INFO     | all job control threads have been joined
[2025-11-20 22:10:38] 2025-11-21 03:09:43,152 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 22:10:38] 2025-11-21 03:09:43,213 | INFO     | [data] control thread has finished
[2025-11-20 22:10:38] 2025-11-21 03:09:43,281 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 22:10:38] 2025-11-21 03:09:43,299 | INFO     | [payload] validate_post thread has finished
[2025-11-20 22:10:38] 2025-11-21 03:09:43,377 | INFO     | [data] copytool_out thread has finished
[2025-11-20 22:10:38] 2025-11-21 03:09:43,468 | INFO     | [data] copytool_in thread has finished
[2025-11-20 22:10:38] 2025-11-21 03:09:43,719 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 22:10:38] 2025-11-21 03:09:43,763 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 22:10:38] 2025-11-21 03:09:44,062 | INFO     | [job] control thread has finished
[2025-11-20 22:10:38] 2025-11-21 03:09:47,768 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 22:10:38] 2025-11-21 03:10:11,139 | INFO     | PID=3010996 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-20 22:10:38] 2025-11-21 03:10:11,139 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 22:10:38] 2025-11-21 03:10:11,139 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 22:10:38] 2025-11-21 03:10:11,139 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 22:10:38] 2025-11-21 03:10:32,778 | INFO     | [monitor] cgroup control has ended
[2025-11-20 22:10:38] 2025-11-21 03:10:33,782 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140333989209920)>', '<ExcThread(monitor, started 140333157447424)>']
[2025-11-20 22:10:38] 2025-11-21 03:10:34,254 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 22:10:38] 2025-11-21 03:10:34,254 | INFO     | [monitor] control thread has ended
[2025-11-20 22:10:38] 2025-11-21 03:10:38,792 | INFO     | all workflow threads have been joined
[2025-11-20 22:10:38] 2025-11-21 03:10:38,792 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 22:10:38] 2025-11-21 03:10:38,792 | INFO     | traces error code: 0
[2025-11-20 22:10:38] 2025-11-21 03:10:38,793 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 22:10:38] 2025-11-21 03:10:38,860 [wrapper] ==== pilot stdout END ====
[2025-11-20 22:10:38] 2025-11-21 03:10:38,861 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 22:10:38] 2025-11-21 03:10:38,862 [wrapper] pilotpid: 3010996
[2025-11-20 22:10:38] 2025-11-21 03:10:38,864 [wrapper] Pilot exit status: 0
[2025-11-20 22:10:38] 2025-11-21 03:10:38,869 [wrapper] pandaids: 6893860175
[2025-11-20 22:10:38] 2025-11-21 03:10:38,894 [wrapper] cleanup supervisor_pilot 3288486 3010997
[2025-11-20 22:10:38] 2025-11-21 03:10:38,896 [wrapper] Test setup, not cleaning
[2025-11-20 22:10:38] 2025-11-21 03:10:38,898 [wrapper] apfmon messages muted
[2025-11-20 22:10:38] 2025-11-21 03:10:38,899 [wrapper] ==== wrapper stdout END ====
[2025-11-20 22:10:38] 2025-11-21 03:10:38,900 [wrapper] ==== wrapper stderr END ====
[2025-11-20 22:10:38]  *** Error codes and diagnostics ***
[2025-11-20 22:10:38]     "exeErrorCode": 0,
[2025-11-20 22:10:38]     "exeErrorDiag": "",
[2025-11-20 22:10:38]     "pilotErrorCode": 0,
[2025-11-20 22:10:38]     "pilotErrorDiag": "",
[2025-11-20 22:10:38]  *** Listing of results directory ***
[2025-11-20 22:10:38] total 1320104
[2025-11-20 22:10:38] -rw-r--r-- 1 boinc boinc    576529 Nov 20 08:12 pilot3.tar.gz
[2025-11-20 22:10:38] -rw-r--r-- 1 boinc boinc      5112 Nov 20 08:39 queuedata.json
[2025-11-20 22:10:38] -rwx------ 1 boinc boinc     36292 Nov 20 08:40 runpilot2-wrapper.sh
[2025-11-20 22:10:38] -rw-r--r-- 1 boinc boinc       100 Nov 20 18:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 22:10:38] -rwxr-xr-x 1 boinc boinc      7986 Nov 20 18:26 run_atlas
[2025-11-20 22:10:38] -rw-r--r-- 1 boinc boinc       105 Nov 20 18:26 job.xml
[2025-11-20 22:10:38] -rw-r--r-- 2 boinc boinc 410536363 Nov 20 18:26 EVNT.47493127._000547.pool.root.1
[2025-11-20 22:10:38] -rw-r--r-- 2 boinc boinc    590101 Nov 20 18:26 input.tar.gz
[2025-11-20 22:10:38] -rw-r--r-- 2 boinc boinc     15847 Nov 20 18:26 start_atlas.sh
[2025-11-20 22:10:38] drwxrwx--x 1 boinc boinc        76 Nov 20 18:26 shared
[2025-11-20 22:10:38] -rw-r--r-- 1 boinc boinc         0 Nov 20 18:26 boinc_setup_complete
[2025-11-20 22:10:38] -rw-r--r-- 1 boinc boinc      9256 Nov 20 18:26 init_data.xml
[2025-11-20 22:10:38] -rw-r--r-- 1 boinc boinc         0 Nov 20 18:26 boinc_lockfile
[2025-11-20 22:10:38] -rw-r--r-- 1 boinc boinc      2786 Nov 20 18:26 pandaJob.out
[2025-11-20 22:10:38] -rw------- 1 boinc boinc    989817 Nov 20 18:27 agis_schedconf.cvmfs.json
[2025-11-20 22:10:38] drwx------ 1 boinc boinc       414 Nov 20 18:27 pilot3
[2025-11-20 22:10:38] -rw-r--r-- 1 boinc boinc       532 Nov 20 22:03 boinc_task_state.xml
[2025-11-20 22:10:38] -rw------- 1 boinc boinc 929562323 Nov 20 22:09 HITS.47523449._005467.pool.root.1
[2025-11-20 22:10:38] -rw------- 1 boinc boinc      1050 Nov 20 22:09 memory_monitor_summary.json
[2025-11-20 22:10:38] -rw------- 1 boinc boinc   1526164 Nov 20 22:09 agis_ddmendpoints.agis.ALL.json
[2025-11-20 22:10:38] -rw------- 1 boinc boinc   2019282 Nov 20 22:09 log.47523449._005467.job.log.tgz.1
[2025-11-20 22:10:38] -rw------- 1 boinc boinc        95 Nov 20 22:09 pilot_heartbeat.json
[2025-11-20 22:10:38] -rw------- 1 boinc boinc      8639 Nov 20 22:09 heartbeat.json
[2025-11-20 22:10:38] -rw-r--r-- 1 boinc boinc      8192 Nov 20 22:10 boinc_mmap_file
[2025-11-20 22:10:38] -rw-r--r-- 1 boinc boinc        29 Nov 20 22:10 wrapper_checkpoint.txt
[2025-11-20 22:10:38] -rw------- 1 boinc boinc      4749 Nov 20 22:10 pilotlog.txt
[2025-11-20 22:10:38] -rw------- 1 boinc boinc   1873966 Nov 20 22:10 log.47523449._005467.job.log.1
[2025-11-20 22:10:38] -rw------- 1 boinc boinc       353 Nov 20 22:10 output.list
[2025-11-20 22:10:38] -rw-r--r-- 1 boinc boinc       620 Nov 20 22:10 runtime_log
[2025-11-20 22:10:38] -rw------- 1 boinc boinc   3911680 Nov 20 22:10 result.tar.gz
[2025-11-20 22:10:38] -rw-r--r-- 1 boinc boinc      8905 Nov 20 22:10 runtime_log.err
[2025-11-20 22:10:38] -rw------- 1 boinc boinc       679 Nov 20 22:10 9QWKDmR4Jg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmvyHKDm0Y6r8n.diag
[2025-11-20 22:10:38] -rw-r--r-- 1 boinc boinc     21748 Nov 20 22:10 stderr.txt
[2025-11-20 22:10:38] HITS file was successfully produced:
[2025-11-20 22:10:38] -rw------- 1 boinc boinc 929562323 Nov 20 22:09 shared/HITS.pool.root.1
[2025-11-20 22:10:38]  *** Contents of shared directory: ***
[2025-11-20 22:10:38] total 1313108
[2025-11-20 22:10:38] -rw-r--r-- 2 boinc boinc 410536363 Nov 20 18:26 ATLAS.root_0
[2025-11-20 22:10:38] -rw-r--r-- 2 boinc boinc    590101 Nov 20 18:26 input.tar.gz
[2025-11-20 22:10:38] -rw-r--r-- 2 boinc boinc     15847 Nov 20 18:26 start_atlas.sh
[2025-11-20 22:10:38] -rw------- 1 boinc boinc 929562323 Nov 20 22:09 HITS.pool.root.1
[2025-11-20 22:10:38] -rw------- 1 boinc boinc   3911680 Nov 20 22:10 result.tar.gz
22:10:40 (3006247): run_atlas exited; CPU time 155167.057556
22:10:40 (3006247): called boinc_finish(0)

</stderr_txt>
]]>

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