Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-11-23 10:57:30 (20780): vboxwrapper version 26210
2025-11-23 10:57:30 (20780): BOINC client version: 8.0.2
2025-11-23 10:57:30 (20780): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-11-23 10:57:30 (20780): Successfully copied 'init_data.xml' to the shared directory.
2025-11-23 10:57:31 (20780): Create VM. (boinc_3320528e293a945d, slot#3)
2025-11-23 10:57:31 (20780): Setting Memory Size for VM. (4400MB)
2025-11-23 10:57:31 (20780): Setting CPU Count for VM. (4)
2025-11-23 10:57:32 (20780): Setting Chipset Options for VM.
2025-11-23 10:57:32 (20780): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-11-23 10:57:32 (20780): Setting Boot Options for VM.
2025-11-23 10:57:33 (20780): Setting Network Configuration for NAT. (Driver: virtio)
2025-11-23 10:57:33 (20780): Enabling VM Network Access.
2025-11-23 10:57:33 (20780): Disabling USB Support for VM.
2025-11-23 10:57:33 (20780): Disabling COM Port Support for VM.
2025-11-23 10:57:34 (20780): Disabling LPT Port Support for VM.
2025-11-23 10:57:34 (20780): Disabling Audio Support for VM.
2025-11-23 10:57:34 (20780): Disabling Clipboard Support for VM.
2025-11-23 10:57:34 (20780): Disabling Drag and Drop Support for VM.
2025-11-23 10:57:35 (20780): Adding storage controller(s) to VM.
2025-11-23 10:57:35 (20780): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-11-23 10:57:35 (20780): Adding VirtualBox Guest Additions to VM.
2025-11-23 10:57:36 (20780): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-11-23 10:57:36 (20780): forwarding host port 50674 to guest port 80
2025-11-23 10:57:36 (20780): Enabling remote desktop for VM.
2025-11-23 10:57:37 (20780): Enabling shared directory for VM.
2025-11-23 10:57:37 (20780): Starting VM using VBoxManage interface. (boinc_3320528e293a945d, slot#3)
2025-11-23 10:57:42 (20780): Successfully started VM. (PID = '32880')
2025-11-23 10:57:42 (20780): Reporting VM Process ID to BOINC.
2025-11-23 10:57:42 (20780): Guest Log: BIOS: VirtualBox 7.1.6
2025-11-23 10:57:42 (20780): Guest Log: CPUID EDX: 0x178bfbff
2025-11-23 10:57:42 (20780): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-11-23 10:57:42 (20780): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-11-23 10:57:42 (20780): VM state change detected. (old = 'poweredoff', new = 'running')
2025-11-23 10:57:42 (20780): Detected: Web Application Enabled (http://localhost:50674)
2025-11-23 10:57:42 (20780): Detected: Remote Desktop Enabled (localhost:50675)
2025-11-23 10:57:42 (20780): Preference change detected
2025-11-23 10:57:42 (20780): Setting CPU throttle for VM. (100%)
2025-11-23 10:57:42 (20780): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-23 10:57:44 (20780): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-11-23 10:57:44 (20780): Guest Log: BIOS: Booting from Hard Disk...
2025-11-23 10:57:46 (20780): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-11-23 10:57:46 (20780): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-11-23 10:57:46 (20780): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-11-23 10:57:46 (20780): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-11-23 10:57:46 (20780): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-11-23 10:57:46 (20780): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-11-23 10:57:46 (20780): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-11-23 10:57:46 (20780): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-11-23 10:57:46 (20780): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-11-23 10:57:46 (20780): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-11-23 10:57:46 (20780): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-11-23 10:57:46 (20780): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-11-23 10:57:46 (20780): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-11-23 10:57:46 (20780): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-11-23 10:57:46 (20780): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-11-23 10:57:46 (20780): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-11-23 10:57:46 (20780): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-11-23 10:57:46 (20780): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-11-23 10:57:46 (20780): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-11-23 10:57:46 (20780): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-11-23 10:57:46 (20780): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-11-23 10:57:46 (20780): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-11-23 10:57:46 (20780): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-11-23 10:57:46 (20780): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-11-23 10:57:46 (20780): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-11-23 10:57:46 (20780): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-11-23 10:57:46 (20780): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-11-23 10:57:46 (20780): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-11-23 10:57:46 (20780): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-11-23 10:57:46 (20780): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-11-23 10:57:46 (20780): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-11-23 10:57:46 (20780): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-11-23 10:57:50 (20780): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-11-23 10:57:50 (20780): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-11-23 10:57:53 (20780): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-11-23 10:57:53 (20780): Guest Log: 00:00:00.000084 main     Log opened 2025-11-23T10:57:51.895379000Z
2025-11-23 10:57:53 (20780): Guest Log: 00:00:00.000178 main     OS Product: Linux
2025-11-23 10:57:53 (20780): Guest Log: 00:00:00.000192 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-11-23 10:57:53 (20780): Guest Log: 00:00:00.000203 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-11-23 10:57:53 (20780): Guest Log: 00:00:00.000212 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-11-23 10:57:53 (20780): Guest Log: 00:00:00.000213 main     Process ID: 1313
2025-11-23 10:57:53 (20780): Guest Log: 00:00:00.000213 main     Package type: LINUX_64BITS_GENERIC
2025-11-23 10:57:53 (20780): Guest Log: 00:00:00.000729 main     5.2.32 r132073 started. Verbose level = 0
2025-11-23 10:57:53 (20780): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-11-23 10:57:53 (20780): Guest Log: [INFO] Mounting shared directory
2025-11-23 10:57:53 (20780): Guest Log: [INFO] Checking for init_data.xml
2025-11-23 10:57:55 (20780): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-11-23 10:57:55 (20780): Guest Log: [INFO] Detected branch: prod
2025-11-23 10:57:55 (20780): Guest Log: This is the prod version of the ATLAS job wrapper
2025-11-23 10:57:55 (20780): Guest Log: Copying input files
2025-11-23 10:57:56 (20780): Guest Log: Copied input files into RunAtlas.
2025-11-23 10:57:56 (20780): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-11-23 10:57:56 (20780): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-11-23 10:57:56 (20780): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-11-23 10:57:56 (20780): Guest Log: Further information can be found at the LHC@home message board.
2025-11-23 10:58:03 (20780): Guest Log: 00:00:10.002099 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 189 120 876 000ns (GuestNow=1 763 888 282 776 184 000 ns GuestLast=1 763 895 471 897 060 000 ns fSetTimeLastLoop=true )
2025-11-23 10:58:06 (20780): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-11-23 10:58:06 (20780): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-11-23 10:58:06 (20780): Guest Log: 2.6.3.0 1588 0 30172 153202 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-11-23 10:58:07 (20780): Guest Log: copied the webapp to /var/www
2025-11-23 10:58:07 (20780): Guest Log: ATHENA_PROC_NUMBER=4
2025-11-23 10:58:07 (20780): Guest Log: ATHENA_CORE_NUMBER=4
2025-11-23 10:58:07 (20780): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-11-23 10:58:07 (20780): Guest Log:  *** Starting ATLAS job. (PandaID=6893848644 taskID=47523449) ***
2025-11-23 12:37:44 (20780): Status Report: Elapsed Time: '6000.000000'
2025-11-23 12:37:44 (20780): Status Report: CPU Time: '22547.000000'
2025-11-23 14:17:47 (20780): Status Report: Elapsed Time: '12000.000000'
2025-11-23 14:17:47 (20780): Status Report: CPU Time: '46006.734375'
2025-11-23 15:57:49 (20780): Status Report: Elapsed Time: '18000.000000'
2025-11-23 15:57:49 (20780): Status Report: CPU Time: '69474.234375'
2025-11-23 15:59:26 (20780): Preference change detected
2025-11-23 15:59:26 (20780): Setting CPU throttle for VM. (100%)
2025-11-23 15:59:26 (20780): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 120 seconds) or (Vbox_job.xml: 900 seconds))
2025-11-23 17:37:51 (20780): Status Report: Elapsed Time: '24000.000000'
2025-11-23 17:37:51 (20780): Status Report: CPU Time: '92947.609375'
2025-11-23 19:17:54 (20780): Status Report: Elapsed Time: '30000.000000'
2025-11-23 19:17:54 (20780): Status Report: CPU Time: '116427.203125'
2025-11-23 20:57:56 (20780): Status Report: Elapsed Time: '36000.000000'
2025-11-23 20:57:56 (20780): Status Report: CPU Time: '139851.921875'
2025-11-23 22:37:58 (20780): Status Report: Elapsed Time: '42000.000000'
2025-11-23 22:37:58 (20780): Status Report: CPU Time: '163319.140625'
2025-11-23 23:02:22 (20780): Guest Log:  *** Job finished ***
2025-11-23 23:02:22 (20780): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-11-23 23:02:22 (20780): Guest Log: 2025-11-23 21:16:19,176 | INFO     | all workflow threads have been joined
2025-11-23 23:02:22 (20780): Guest Log: 2025-11-23 21:16:19,176 | INFO     | end of generic workflow (traces error code: 0)
2025-11-23 23:02:22 (20780): Guest Log: 2025-11-23 21:16:19,176 | INFO     | traces error code: 0
2025-11-23 23:02:22 (20780): Guest Log: 2025-11-23 21:16:19,176 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-11-23 23:02:22 (20780): Guest Log: 2025-11-23 21:16:31,467 | INFO     | PID=5988 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-11-23 23:02:22 (20780): Guest Log: 2025-11-23 21:16:31,467 | INFO     | found 0 job(s) in 20 queues
2025-11-23 23:02:22 (20780): Guest Log: 2025-11-23 21:16:31,467 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-11-23 23:02:22 (20780): Guest Log: 2025-11-23 21:16:31,467 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-11-23 23:02:22 (20780): Guest Log: 2025-11-23 21:16:31,467 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-11-23 23:02:22 (20780): Guest Log: 2025-11-23 21:16:31,467 | INFO     | [monitor] control thread has ended
2025-11-23 23:02:22 (20780): Guest Log: 2025-11-23 21:16:31,535 [wrapper] ==== pilot stdout END ====
2025-11-23 23:02:22 (20780): Guest Log: 2025-11-23 21:16:31,537 [wrapper] ==== wrapper stdout RESUME ====
2025-11-23 23:02:22 (20780): Guest Log: 2025-11-23 21:16:31,539 [wrapper] pilotpid: 5988
2025-11-23 23:02:22 (20780): Guest Log: 2025-11-23 21:16:31,541 [wrapper] Pilot exit status: 0
2025-11-23 23:02:22 (20780): Guest Log: 2025-11-23 21:16:31,549 [wrapper] pandaids: 6893848644
2025-11-23 23:02:22 (20780): Guest Log: 2025-11-23 21:16:31,565 [wrapper] cleanup supervisor_pilot 15718 5989
2025-11-23 23:02:22 (20780): Guest Log: 2025-11-23 21:16:31,568 [wrapper] Test setup, not cleaning
2025-11-23 23:02:22 (20780): Guest Log: 2025-11-23 21:16:31,570 [wrapper] apfmon messages muted
2025-11-23 23:02:22 (20780): Guest Log: 2025-11-23 21:16:31,572 [wrapper] ==== wrapper stdout END ====
2025-11-23 23:02:22 (20780): Guest Log: 2025-11-23 21:16:31,575 [wrapper] ==== wrapper stderr END ====
2025-11-23 23:02:22 (20780): Guest Log:  *** Error codes and diagnostics ***
2025-11-23 23:02:22 (20780): Guest Log:     "exeErrorCode": 0,
2025-11-23 23:02:22 (20780): Guest Log:     "exeErrorDiag": "",
2025-11-23 23:02:22 (20780): Guest Log:     "pilotErrorCode": 0,
2025-11-23 23:02:22 (20780): Guest Log:     "pilotErrorDiag": "",
2025-11-23 23:02:22 (20780): Guest Log:  *** Listing of results directory ***
2025-11-23 23:02:22 (20780): Guest Log: total 910180
2025-11-23 23:02:22 (20780): Guest Log: -rw-r--r--. 1 atlas atlas    576529 Nov 20 10:06 pilot3.tar.gz
2025-11-23 23:02:22 (20780): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Nov 20 10:48 queuedata.json
2025-11-23 23:02:22 (20780): Guest Log: -rwx------. 1 atlas atlas     36292 Nov 20 10:48 runpilot2-wrapper.sh
2025-11-23 23:02:22 (20780): Guest Log: -rwxr-xr-x. 1 atlas atlas     12169 Nov 23 08:57 init_data.xml
2025-11-23 23:02:22 (20780): Guest Log: -rwxr-xr-x. 1 atlas atlas    590098 Nov 23 08:57 input.tar.gz
2025-11-23 23:02:22 (20780): Guest Log: -rwxr-xr-x. 1 atlas atlas     15847 Nov 23 08:57 start_atlas.sh
2025-11-23 23:02:22 (20780): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Nov 23 08:57 EVNT.47493127._000286.pool.root.1 -> /data/./ATLAS.root_0
2025-11-23 23:02:22 (20780): Guest Log: -rw-r--r--. 1 atlas atlas      2785 Nov 23 08:58 pandaJob.out
2025-11-23 23:02:22 (20780): Guest Log: -rw-------. 1 atlas atlas    989784 Nov 23 08:58 agis_schedconf.cvmfs.json
2025-11-23 23:02:22 (20780): Guest Log: drwx------. 5 atlas atlas      4096 Nov 23 08:58 pilot3
2025-11-23 23:02:22 (20780): Guest Log: -rw-------. 1 atlas atlas 913097742 Nov 23 21:15 HITS.47523449._002856.pool.root.1
2025-11-23 23:02:22 (20780): Guest Log: -rw-------. 1 atlas atlas      1036 Nov 23 21:15 memory_monitor_summary.json
2025-11-23 23:02:22 (20780): Guest Log: -rw-------. 1 atlas atlas        95 Nov 23 21:15 pilot_heartbeat.json
2025-11-23 23:02:22 (20780): Guest Log: -rw-------. 1 atlas atlas   1526164 Nov 23 21:15 agis_ddmendpoints.agis.ALL.json
2025-11-23 23:02:22 (20780): Guest Log: -rw-------. 1 atlas atlas   1493241 Nov 23 21:15 log.47523449._002856.job.log.tgz.1
2025-11-23 23:02:22 (20780): Guest Log: -rw-------. 1 atlas atlas      8607 Nov 23 21:16 heartbeat.json
2025-11-23 23:02:22 (20780): Guest Log: -rw-------. 1 atlas atlas       744 Nov 23 21:16 pilotlog.txt
2025-11-23 23:02:22 (20780): Guest Log: -rw-------. 1 atlas atlas   6047943 Nov 23 21:16 log.47523449._002856.job.log.1
2025-11-23 23:02:22 (20780): Guest Log: -rw-------. 1 atlas atlas       353 Nov 23 21:16 output.list
2025-11-23 23:02:22 (20780): Guest Log: -rw-r--r--. 1 atlas atlas       620 Nov 23 21:16 runtime_log
2025-11-23 23:02:22 (20780): Guest Log: -rw-------. 1 atlas atlas   7557120 Nov 23 21:16 result.tar.gz
2025-11-23 23:02:22 (20780): Guest Log: -rw-r--r--. 1 atlas atlas      8749 Nov 23 21:16 runtime_log.err
2025-11-23 23:02:22 (20780): Guest Log: -rw-------. 1 atlas atlas       664 Nov 23 21:16 krSNDmjOHg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm4TGKDmngKyRn.diag
2025-11-23 23:02:22 (20780): Guest Log: Looking for outputfile HITS.47523449._002856.pool.root.1
2025-11-23 23:02:22 (20780): Guest Log: HITS file was successfully produced
2025-11-23 23:02:22 (20780): Guest Log: -rw-------. 1 atlas atlas 913097742 Nov 23 21:15 /home/atlas/RunAtlas/HITS.47523449._002856.pool.root.1
2025-11-23 23:02:24 (20780): Guest Log: Successfully finished the ATLAS job!
2025-11-23 23:02:24 (20780): Guest Log: Copying the results back to the shared directory!
2025-11-23 23:02:24 (20780): Guest Log:  *** Contents of shared directory: ***
2025-11-23 23:02:24 (20780): Guest Log: total 1300248
2025-11-23 23:02:24 (20780): Guest Log: -rwxrwxrwx. 1 root root 410170883 Nov 23 08:57 ATLAS.root_0
2025-11-23 23:02:24 (20780): Guest Log: -rwxrwxrwx. 1 root root 913097742 Nov 23 21:02 HITS.pool.root.1
2025-11-23 23:02:24 (20780): Guest Log: -rwxrwxrwx. 1 root root     12169 Nov 23 08:57 init_data.xml
2025-11-23 23:02:24 (20780): Guest Log: -rwxrwxrwx. 1 root root    590098 Nov 20 23:14 input.tar.gz
2025-11-23 23:02:24 (20780): Guest Log: -rwxrwxrwx. 1 root root   7557120 Nov 23 21:02 result.tar.gz
2025-11-23 23:02:24 (20780): Guest Log: -rwxrwxrwx. 1 root root     15847 Nov 20 23:14 start_atlas.sh
2025-11-23 23:02:24 (20780): Guest Log:  *** Success! Shutting down the machine. ***
2025-11-23 23:02:24 (20780): VM Completion File Detected.
2025-11-23 23:02:24 (20780): Powering off VM.
2025-11-23 23:02:24 (20780): Successfully stopped VM.
2025-11-23 23:02:24 (20780): Deregistering VM. (boinc_3320528e293a945d, slot#3)
2025-11-23 23:02:24 (20780): Removing network bandwidth throttle group from VM.
2025-11-23 23:02:25 (20780): Removing VM from VirtualBox.
2025-11-23 23:02:30 (20780): called boinc_finish(0)

</stderr_txt>
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