Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
17:34:55 (5689): wrapper (7.7.26015): starting
17:34:55 (5689): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 17:34:55] Arguments: --nthreads 8
[2025-11-20 17:34:55] Threads: 8
[2025-11-20 17:34:55] Checking for CVMFS
[2025-11-20 17:34:55] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 17:34:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 17:34:55] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 17:34:56] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 17:34:56] 2.11.2.0 2831 35020 79512 153098 3 80 16329510 20275200 1 130560 0 3144067 99.378 2485801 24220 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-20 17:34:56] CVMFS is ok
[2025-11-20 17:34:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 17:34:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 17:34:56] Further information can be found at the LHC@home message board.
[2025-11-20 17:34:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 17:34:56] Checking for apptainer binary...
[2025-11-20 17:34:56] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 17:34:56] Running /usr/bin/apptainer --version
[2025-11-20 17:34:56] apptainer version 1.3.2-1.el7
[2025-11-20 17:34:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 17:34:57] c-204-31.aglt2.org
[2025-11-20 17:34:57] apptainer works
[2025-11-20 17:34:57] Set ATHENA_PROC_NUMBER=8
[2025-11-20 17:34:57] Set ATHENA_CORE_NUMBER=8
[2025-11-20 17:34:57] Starting ATLAS job with PandaID=6893859006
[2025-11-20 17:34:57] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 05:41:33]  *** The last 200 lines of the pilot log: ***
[2025-11-21 05:41:33] 2025-11-21 10:40:38,457 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 05:41:33] 2025-11-21 10:40:38,565 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-21 05:41:33] 2025-11-21 10:40:38,569 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1695.875
[2025-11-21 05:41:33] 2025-11-21 10:40:38,571 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6893859006/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 05:41:33] 2025-11-21 10:40:38,572 | INFO     | extracted standard info from prmon json
[2025-11-21 05:41:33] 2025-11-21 10:40:38,572 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 05:41:33] 2025-11-21 10:40:38,572 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 05:41:33] 2025-11-21 10:40:38,585 | INFO     | fitting pss+swap vs Time
[2025-11-21 05:41:33] 2025-11-21 10:40:38,586 | INFO     | sum of square deviations: 112394456802.50784
[2025-11-21 05:41:33] 2025-11-21 10:40:38,597 | INFO     | sum of deviations: 725198733059.6139
[2025-11-21 05:41:33] 2025-11-21 10:40:38,597 | INFO     | mean x: 1763699864.628331
[2025-11-21 05:41:33] 2025-11-21 10:40:38,597 | INFO     | mean y: 3143293.5834502103
[2025-11-21 05:41:33] 2025-11-21 10:40:38,597 | INFO     | intersect: -11376714252.000944
[2025-11-21 05:41:33] 2025-11-21 10:40:38,598 | INFO     | chi2: 5.827720554291444
[2025-11-21 05:41:33] 2025-11-21 10:40:38,599 | INFO     | sum of square deviations: 110046586625.51987
[2025-11-21 05:41:33] 2025-11-21 10:40:38,610 | INFO     | sum of deviations: 963073178868.748
[2025-11-21 05:41:33] 2025-11-21 10:40:38,610 | INFO     | mean x: 1763699712.1327684
[2025-11-21 05:41:33] 2025-11-21 10:40:38,610 | INFO     | mean y: 3158736.20480226
[2025-11-21 05:41:33] 2025-11-21 10:40:38,610 | INFO     | intersect: -15431866923.552475
[2025-11-21 05:41:33] 2025-11-21 10:40:38,611 | INFO     | chi2: 3.118055864837606
[2025-11-21 05:41:33] 2025-11-21 10:40:38,611 | INFO     | current chi2=3.118055864837606 (change=46.49613282260905 %)
[2025-11-21 05:41:33] 2025-11-21 10:40:38,612 | INFO     | sum of square deviations: 107731647298.50352
[2025-11-21 05:41:33] 2025-11-21 10:40:38,622 | INFO     | sum of deviations: 1060077259272.0525
[2025-11-21 05:41:33] 2025-11-21 10:40:38,622 | INFO     | mean x: 1763699559.6372688
[2025-11-21 05:41:33] 2025-11-21 10:40:38,623 | INFO     | mean y: 3165118.6315789474
[2025-11-21 05:41:33] 2025-11-21 10:40:38,623 | INFO     | intersect: -17351603347.67751
[2025-11-21 05:41:33] 2025-11-21 10:40:38,623 | INFO     | chi2: 2.549016995509201
[2025-11-21 05:41:33] 2025-11-21 10:40:38,624 | INFO     | current chi2=2.549016995509201 (change=18.24979711702637 %)
[2025-11-21 05:41:33] 2025-11-21 10:40:38,624 | INFO     | right removable region: 702
[2025-11-21 05:41:33] 2025-11-21 10:40:38,625 | INFO     | sum of square deviations: 110046356594.784
[2025-11-21 05:41:33] 2025-11-21 10:40:38,636 | INFO     | sum of deviations: 506668890341.2116
[2025-11-21 05:41:33] 2025-11-21 10:40:38,636 | INFO     | mean x: 1763700017.131356
[2025-11-21 05:41:33] 2025-11-21 10:40:38,637 | INFO     | mean y: 3157461.34180791
[2025-11-21 05:41:33] 2025-11-21 10:40:38,637 | INFO     | intersect: -8117165266.517367
[2025-11-21 05:41:33] 2025-11-21 10:40:38,638 | INFO     | chi2: 3.422414192775157
[2025-11-21 05:41:33] 2025-11-21 10:40:38,638 | INFO     | current chi2=3.422414192775157 (change=41.27353635282077 %)
[2025-11-21 05:41:33] 2025-11-21 10:40:38,638 | INFO     | sum of square deviations: 107731316801.84091
[2025-11-21 05:41:33] 2025-11-21 10:40:38,650 | INFO     | sum of deviations: 464178149602.348
[2025-11-21 05:41:33] 2025-11-21 10:40:38,650 | INFO     | mean x: 1763700169.6301565
[2025-11-21 05:41:33] 2025-11-21 10:40:38,650 | INFO     | mean y: 3160258.559032717
[2025-11-21 05:41:33] 2025-11-21 10:40:38,650 | INFO     | intersect: -7596032859.057107
[2025-11-21 05:41:33] 2025-11-21 10:40:38,651 | INFO     | chi2: 3.3814963928313584
[2025-11-21 05:41:33] 2025-11-21 10:40:38,651 | INFO     | current chi2=3.3814963928313584 (change=1.1955829317847506 %)
[2025-11-21 05:41:33] 2025-11-21 10:40:38,651 | INFO     | left removable region: 20
[2025-11-21 05:41:33] 2025-11-21 10:40:38,652 | INFO     | sum of square deviations: 98362718873.0439
[2025-11-21 05:41:33] 2025-11-21 10:40:38,662 | INFO     | sum of deviations: 746747021913.6676
[2025-11-21 05:41:33] 2025-11-21 10:40:38,662 | INFO     | mean x: 1763700139.13783
[2025-11-21 05:41:33] 2025-11-21 10:40:38,662 | INFO     | mean y: 3185882.1950146626
[2025-11-21 05:41:33] 2025-11-21 10:40:38,662 | INFO     | intersect: -13386417836.972076
[2025-11-21 05:41:33] 2025-11-21 10:40:38,663 | INFO     | chi2: 0.07002154757747761
[2025-11-21 05:41:33] 2025-11-21 10:40:38,663 | INFO     | current memory leak: 7.59 B/s (using 682 data points, chi2=0.07)
[2025-11-21 05:41:33] 2025-11-21 10:40:38,664 | INFO     | could have reported an average CPU frequency of 2173 MHz (27 samples)
[2025-11-21 05:41:33] 2025-11-21 10:40:38,664 | INFO     | ..............................
[2025-11-21 05:41:33] 2025-11-21 10:40:38,664 | INFO     | . Timing measurements:
[2025-11-21 05:41:33] 2025-11-21 10:40:38,664 | INFO     | . get job = 0 s
[2025-11-21 05:41:33] 2025-11-21 10:40:38,664 | INFO     | . initial setup = 2 s
[2025-11-21 05:41:33] 2025-11-21 10:40:38,664 | INFO     | . payload setup = 9 s
[2025-11-21 05:41:33] 2025-11-21 10:40:38,664 | INFO     | . stage-in = 0 s
[2025-11-21 05:41:33] 2025-11-21 10:40:38,664 | INFO     | . payload execution = 43478 s
[2025-11-21 05:41:33] 2025-11-21 10:40:38,665 | INFO     | . stage-out = 3 s
[2025-11-21 05:41:33] 2025-11-21 10:40:38,665 | INFO     | . log creation = 0 s
[2025-11-21 05:41:33] 2025-11-21 10:40:38,665 | INFO     | ..............................
[2025-11-21 05:41:33] 2025-11-21 10:40:38,758 | INFO     | 
[2025-11-21 05:41:33] 2025-11-21 10:40:38,758 | INFO     | job summary report
[2025-11-21 05:41:33] 2025-11-21 10:40:38,758 | INFO     | --------------------------------------------------
[2025-11-21 05:41:33] 2025-11-21 10:40:38,758 | INFO     | PanDA job id: 6893859006
[2025-11-21 05:41:33] 2025-11-21 10:40:38,759 | INFO     | task id: 47523449
[2025-11-21 05:41:33] 2025-11-21 10:40:38,759 | INFO     | errors: (none)
[2025-11-21 05:41:33] 2025-11-21 10:40:38,759 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 05:41:33] 2025-11-21 10:40:38,759 | INFO     | pilot state: finished 
[2025-11-21 05:41:33] 2025-11-21 10:40:38,759 | INFO     | transexitcode: 0
[2025-11-21 05:41:33] 2025-11-21 10:40:38,760 | INFO     | exeerrorcode: 0
[2025-11-21 05:41:33] 2025-11-21 10:40:38,760 | INFO     | exeerrordiag: 
[2025-11-21 05:41:33] 2025-11-21 10:40:38,760 | INFO     | exitcode: 0
[2025-11-21 05:41:33] 2025-11-21 10:40:38,760 | INFO     | exitmsg: OK
[2025-11-21 05:41:33] 2025-11-21 10:40:38,760 | INFO     | cpuconsumptiontime: 337224 s
[2025-11-21 05:41:33] 2025-11-21 10:40:38,760 | INFO     | nevents: 1000
[2025-11-21 05:41:33] 2025-11-21 10:40:38,760 | INFO     | neventsw: 0
[2025-11-21 05:41:33] 2025-11-21 10:40:38,761 | INFO     | pid: 16898
[2025-11-21 05:41:33] 2025-11-21 10:40:38,761 | INFO     | pgrp: 16898
[2025-11-21 05:41:33] 2025-11-21 10:40:38,761 | INFO     | corecount: 8
[2025-11-21 05:41:33] 2025-11-21 10:40:38,761 | INFO     | event service: False
[2025-11-21 05:41:33] 2025-11-21 10:40:38,761 | INFO     | sizes: {0: 2298642, 1: 2298784, 7: 2299046, 11: 2299074, 43491: 2344444, 43496: 2353438, 43499: 2353622, 43506: 2353868}
[2025-11-21 05:41:33] 2025-11-21 10:40:38,761 | INFO     | --------------------------------------------------
[2025-11-21 05:41:33] 2025-11-21 10:40:38,762 | INFO     | 
[2025-11-21 05:41:33] 2025-11-21 10:40:38,762 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-21 05:41:33] 2025-11-21 10:40:38,791 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 05:41:33] 2025-11-21 10:40:38,792 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 05:41:33] 2025-11-21 10:40:38,792 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 05:41:33] 2025-11-21 10:40:38,792 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 05:41:33] 2025-11-21 10:40:38,792 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 05:41:33] 2025-11-21 10:40:38,792 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 05:41:33] 2025-11-21 10:40:38,793 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 05:41:33] 2025-11-21 10:40:38,793 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 05:41:33] 2025-11-21 10:40:38,793 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 05:41:33] 2025-11-21 10:40:38,793 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 05:41:33] 2025-11-21 10:40:38,793 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 05:41:33] 2025-11-21 10:40:38,794 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 05:41:33] 2025-11-21 10:40:38,794 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 05:41:33] 2025-11-21 10:40:38,794 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 05:41:33] 2025-11-21 10:40:38,794 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 05:41:33] 2025-11-21 10:40:38,794 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 05:41:33] 2025-11-21 10:40:38,794 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 05:41:33] 2025-11-21 10:40:38,795 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 05:41:33] 2025-11-21 10:40:38,795 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 05:41:33] 2025-11-21 10:40:38,795 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 05:41:33] 2025-11-21 10:40:38,795 | INFO     | job 6893859006 has completed (purged errors)
[2025-11-21 05:41:33] 2025-11-21 10:40:38,796 | INFO     | overall cleanup function is called
[2025-11-21 05:41:33] 2025-11-21 10:40:39,809 | INFO     | --- collectZombieJob: --- 10, [16898]
[2025-11-21 05:41:33] 2025-11-21 10:40:39,809 | INFO     | zombie collector waiting for pid 16898
[2025-11-21 05:41:33] 2025-11-21 10:40:39,810 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 05:41:33] 2025-11-21 10:40:39,810 | INFO     | collected zombie processes
[2025-11-21 05:41:33] 2025-11-21 10:40:39,810 | INFO     | will attempt to kill all subprocesses of pid=16898
[2025-11-21 05:41:33] 2025-11-21 10:40:39,902 | INFO     | process IDs to be killed: [16898] (in reverse order)
[2025-11-21 05:41:33] 2025-11-21 10:40:39,963 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 05:41:33] 2025-11-21 10:40:39,963 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 05:41:33] 2025-11-21 10:40:39,968 | INFO     | did not find any defunct processes belonging to 16898
[2025-11-21 05:41:33] 2025-11-21 10:40:39,971 | INFO     | did not find any defunct processes belonging to 16898
[2025-11-21 05:41:33] 2025-11-21 10:40:39,974 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 05:41:33] 2025-11-21 10:40:39,974 | INFO     | ready for new job
[2025-11-21 05:41:33] 2025-11-21 10:40:39,974 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 05:41:33] 2025-11-21 10:40:39,978 | INFO     | ***************************************
[2025-11-21 05:41:33] 2025-11-21 10:40:39,978 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 05:41:33] 2025-11-21 10:40:39,978 | INFO     | ***************************************
[2025-11-21 05:41:33] 2025-11-21 10:40:39,978 | INFO     | 
[2025-11-21 05:41:33] 2025-11-21 10:40:39,978 | INFO     | architecture information:
[2025-11-21 05:41:33] 2025-11-21 10:40:39,979 | INFO     | executing command: cat /etc/os-release
[2025-11-21 05:41:33] 2025-11-21 10:40:40,000 | INFO     | cat /etc/os-release:
[2025-11-21 05:41:33] NAME="CentOS Linux"
[2025-11-21 05:41:33] VERSION="7 (Core)"
[2025-11-21 05:41:33] ID="centos"
[2025-11-21 05:41:33] ID_LIKE="rhel fedora"
[2025-11-21 05:41:33] VERSION_ID="7"
[2025-11-21 05:41:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 05:41:33] ANSI_COLOR="0;31"
[2025-11-21 05:41:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 05:41:33] HOME_URL="https://www.centos.org/"
[2025-11-21 05:41:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 05:41:33] 
[2025-11-21 05:41:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 05:41:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 05:41:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 05:41:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 05:41:33] 
[2025-11-21 05:41:33] 2025-11-21 10:40:40,001 | INFO     | ***************************************
[2025-11-21 05:41:33] 2025-11-21 10:40:40,504 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-21 05:41:33] 2025-11-21 10:40:40,527 | INFO     | sufficient remaining disk space (17448304640 B)
[2025-11-21 05:41:33] 2025-11-21 10:40:40,527 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 05:41:33] 2025-11-21 10:40:40,527 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 05:41:33] 2025-11-21 10:40:40,528 | INFO     | update_server=False
[2025-11-21 05:41:33] 2025-11-21 10:40:40,528 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 05:41:33] 2025-11-21 10:40:40,528 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 05:41:33] 2025-11-21 10:40:40,529 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 05:41:33] 2025-11-21 10:40:40,624 | INFO     | all data control threads have been joined
[2025-11-21 05:41:33] 2025-11-21 10:40:40,750 | INFO     | all payload control threads have been joined
[2025-11-21 05:41:33] 2025-11-21 10:40:40,961 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-21 05:41:33] 2025-11-21 10:40:40,961 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-21 05:41:33] 2025-11-21 10:40:40,961 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 05:41:33] 2025-11-21 10:40:40,961 | INFO     | will abort loop
[2025-11-21 05:41:33] 2025-11-21 10:40:41,533 | INFO     | [job] queue monitor thread has finished
[2025-11-21 05:41:33] 2025-11-21 10:40:41,534 | INFO     | [job] retrieve thread has finished
[2025-11-21 05:41:33] 2025-11-21 10:40:41,552 | INFO     | all job control threads have been joined
[2025-11-21 05:41:33] 2025-11-21 10:40:41,629 | INFO     | [data] control thread has finished
[2025-11-21 05:41:33] 2025-11-21 10:40:41,756 | INFO     | [payload] control thread has finished
[2025-11-21 05:41:33] 2025-11-21 10:40:41,967 | INFO     | [job] job monitor thread has finished
[2025-11-21 05:41:33] 2025-11-21 10:40:42,046 | INFO     | [payload] failed_post thread has finished
[2025-11-21 05:41:33] 2025-11-21 10:40:42,070 | INFO     | [job] validate thread has finished
[2025-11-21 05:41:33] 2025-11-21 10:40:42,183 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 05:41:33] 2025-11-21 10:40:42,492 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 05:41:33] 2025-11-21 10:40:42,531 | INFO     | [data] copytool_out thread has finished
[2025-11-21 05:41:33] 2025-11-21 10:40:42,557 | INFO     | [job] control thread has finished
[2025-11-21 05:41:33] 2025-11-21 10:40:42,662 | INFO     | [payload] validate_post thread has finished
[2025-11-21 05:41:33] 2025-11-21 10:40:42,918 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 05:41:33] 2025-11-21 10:40:42,971 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 05:41:33] 2025-11-21 10:40:42,989 | INFO     | [data] copytool_in thread has finished
[2025-11-21 05:41:33] 2025-11-21 10:40:46,186 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 05:41:33] 2025-11-21 10:40:51,196 | INFO     | job.realtimelogging is not enabled
[2025-11-21 05:41:33] 2025-11-21 10:40:52,201 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 05:41:33] 2025-11-21 10:41:11,482 | INFO     | PID=10394 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-21 05:41:33] 2025-11-21 10:41:11,483 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 05:41:33] 2025-11-21 10:41:11,483 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 05:41:33] 2025-11-21 10:41:11,483 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 05:41:33] 2025-11-21 10:41:27,138 | INFO     | [monitor] cgroup control has ended
[2025-11-21 05:41:33] 2025-11-21 10:41:28,122 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140063069972288)>', '<ExcThread(monitor, started 140061953742592)>']
[2025-11-21 05:41:33] 2025-11-21 10:41:28,564 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 05:41:33] 2025-11-21 10:41:28,564 | INFO     | [monitor] control thread has ended
[2025-11-21 05:41:33] 2025-11-21 10:41:33,133 | INFO     | all workflow threads have been joined
[2025-11-21 05:41:33] 2025-11-21 10:41:33,134 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 05:41:33] 2025-11-21 10:41:33,134 | INFO     | traces error code: 0
[2025-11-21 05:41:33] 2025-11-21 10:41:33,134 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 05:41:33] 2025-11-21 10:41:33,246 [wrapper] ==== pilot stdout END ====
[2025-11-21 05:41:33] 2025-11-21 10:41:33,251 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 05:41:33] 2025-11-21 10:41:33,256 [wrapper] pilotpid: 10394
[2025-11-21 05:41:33] 2025-11-21 10:41:33,261 [wrapper] Pilot exit status: 0
[2025-11-21 05:41:33] 2025-11-21 10:41:33,277 [wrapper] pandaids: 6893859006
[2025-11-21 05:41:33] 2025-11-21 10:41:33,332 [wrapper] cleanup supervisor_pilot 24636 10395
[2025-11-21 05:41:33] 2025-11-21 10:41:33,336 [wrapper] Test setup, not cleaning
[2025-11-21 05:41:33] 2025-11-21 10:41:33,341 [wrapper] apfmon messages muted
[2025-11-21 05:41:33] 2025-11-21 10:41:33,346 [wrapper] ==== wrapper stdout END ====
[2025-11-21 05:41:33] 2025-11-21 10:41:33,351 [wrapper] ==== wrapper stderr END ====
[2025-11-21 05:41:33]  *** Error codes and diagnostics ***
[2025-11-21 05:41:33]     "exeErrorCode": 0,
[2025-11-21 05:41:33]     "exeErrorDiag": "",
[2025-11-21 05:41:33]     "pilotErrorCode": 0,
[2025-11-21 05:41:33]     "pilotErrorDiag": "",
[2025-11-21 05:41:33]  *** Listing of results directory ***
[2025-11-21 05:41:33] total 1307128
[2025-11-21 05:41:33] -rw-r--r-- 1 boincer umatlas    576529 Nov 20 08:12 pilot3.tar.gz
[2025-11-21 05:41:33] -rw-r--r-- 1 boincer umatlas      5112 Nov 20 08:26 queuedata.json
[2025-11-21 05:41:33] -rwx------ 1 boincer umatlas     36292 Nov 20 08:27 runpilot2-wrapper.sh
[2025-11-21 05:41:33] -rw-r--r-- 1 boincer umatlas       100 Nov 20 17:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 05:41:33] -rwxr-xr-x 1 boincer umatlas      7986 Nov 20 17:34 run_atlas
[2025-11-21 05:41:33] -rw-r--r-- 1 boincer umatlas       105 Nov 20 17:34 job.xml
[2025-11-21 05:41:33] -rw-r--r-- 2 boincer umatlas 408357753 Nov 20 17:34 EVNT.47493127._000525.pool.root.1
[2025-11-21 05:41:33] -rw-r--r-- 2 boincer umatlas     15847 Nov 20 17:34 start_atlas.sh
[2025-11-21 05:41:33] drwxrwx--x 2 boincer umatlas      4096 Nov 20 17:34 shared
[2025-11-21 05:41:33] -rw-r--r-- 2 boincer umatlas    590101 Nov 20 17:34 input.tar.gz
[2025-11-21 05:41:33] -rw-r--r-- 1 boincer umatlas         0 Nov 20 17:34 boinc_lockfile
[2025-11-21 05:41:33] -rw-r--r-- 1 boincer umatlas      2785 Nov 20 17:34 pandaJob.out
[2025-11-21 05:41:33] -rw------- 1 boincer umatlas        57 Nov 20 17:34 setup.sh.local
[2025-11-21 05:41:33] -rw------- 1 boincer umatlas    989825 Nov 20 17:35 agis_schedconf.cvmfs.json
[2025-11-21 05:41:33] drwx------ 5 boincer umatlas      4096 Nov 20 17:35 pilot3
[2025-11-21 05:41:33] -rw-r--r-- 1 boincer umatlas       532 Nov 21 05:29 boinc_task_state.xml
[2025-11-21 05:41:33] -rw------- 1 boincer umatlas 910337799 Nov 21 05:39 HITS.47523449._005248.pool.root.1
[2025-11-21 05:41:33] -rw-r--r-- 1 boincer umatlas      5911 Nov 21 05:40 init_data.xml
[2025-11-21 05:41:33] -rw------- 1 boincer umatlas      1064 Nov 21 05:40 memory_monitor_summary.json
[2025-11-21 05:41:33] -rw------- 1 boincer umatlas   1526164 Nov 21 05:40 agis_ddmendpoints.agis.ALL.json
[2025-11-21 05:41:33] -rw------- 1 boincer umatlas   1956767 Nov 21 05:40 log.47523449._005248.job.log.tgz.1
[2025-11-21 05:41:33] -rw------- 1 boincer umatlas      8660 Nov 21 05:40 heartbeat.json
[2025-11-21 05:41:33] -rw------- 1 boincer umatlas        95 Nov 21 05:41 pilot_heartbeat.json
[2025-11-21 05:41:33] -rw-r--r-- 1 boincer umatlas      8192 Nov 21 05:41 boinc_mmap_file
[2025-11-21 05:41:33] -rw-r--r-- 1 boincer umatlas        29 Nov 21 05:41 wrapper_checkpoint.txt
[2025-11-21 05:41:33] -rw------- 1 boincer umatlas      5004 Nov 21 05:41 pilotlog.txt
[2025-11-21 05:41:33] -rw------- 1 boincer umatlas   5983912 Nov 21 05:41 log.47523449._005248.job.log.1
[2025-11-21 05:41:33] -rw------- 1 boincer umatlas       353 Nov 21 05:41 output.list
[2025-11-21 05:41:33] -rw-r--r-- 1 boincer umatlas       620 Nov 21 05:41 runtime_log
[2025-11-21 05:41:33] -rw------- 1 boincer umatlas   7956480 Nov 21 05:41 result.tar.gz
[2025-11-21 05:41:33] -rw-r--r-- 1 boincer umatlas      9343 Nov 21 05:41 runtime_log.err
[2025-11-21 05:41:33] -rw------- 1 boincer umatlas       668 Nov 21 05:41 pbbNDmDsJg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmEwHKDm4Ii87m.diag
[2025-11-21 05:41:33] -rw-r--r-- 1 boincer umatlas     21264 Nov 21 05:41 stderr.txt
[2025-11-21 05:41:33] HITS file was successfully produced:
[2025-11-21 05:41:33] -rw------- 1 boincer umatlas 910337799 Nov 21 05:39 shared/HITS.pool.root.1
[2025-11-21 05:41:33]  *** Contents of shared directory: ***
[2025-11-21 05:41:33] total 1296168
[2025-11-21 05:41:33] -rw-r--r-- 2 boincer umatlas 408357753 Nov 20 17:34 ATLAS.root_0
[2025-11-21 05:41:33] -rw-r--r-- 2 boincer umatlas     15847 Nov 20 17:34 start_atlas.sh
[2025-11-21 05:41:33] -rw-r--r-- 2 boincer umatlas    590101 Nov 20 17:34 input.tar.gz
[2025-11-21 05:41:33] -rw------- 1 boincer umatlas 910337799 Nov 21 05:39 HITS.pool.root.1
[2025-11-21 05:41:33] -rw------- 1 boincer umatlas   7956480 Nov 21 05:41 result.tar.gz
05:41:35 (5689): run_atlas exited; CPU time 334869.507655
05:41:35 (5689): called boinc_finish(0)

</stderr_txt>
]]>

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