Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
17:16:23 (2495514): wrapper (7.7.26015): starting
17:16:23 (2495514): wrapper: running run_atlas (--nthreads 3)
[2025-11-23 17:16:23] Arguments: --nthreads 3
[2025-11-23 17:16:23] Threads: 3
[2025-11-23 17:16:23] Checking for CVMFS
[2025-11-23 17:16:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-23 17:16:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-23 17:16:23] Running cvmfs_config stat atlas.cern.ch
[2025-11-23 17:16:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-23 17:16:23] 2.9.2.0 1559605 6988 86740 153215 2 71 36466951 36864001 0 130560 0 2566477 99.903 415647 6355 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-11-23 17:16:23] CVMFS is ok
[2025-11-23 17:16:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 17:16:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 17:16:23] Further information can be found at the LHC@home message board.
[2025-11-23 17:16:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 17:16:23] Checking for apptainer binary...
[2025-11-23 17:16:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-23 17:16:23] Running /usr/bin/apptainer --version
[2025-11-23 17:16:23] apptainer version 1.4.1-1.1
[2025-11-23 17:16:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 17:16:23] atlasA223
[2025-11-23 17:16:23] apptainer works
[2025-11-23 17:16:23] Set ATHENA_PROC_NUMBER=3
[2025-11-23 17:16:23] Set ATHENA_CORE_NUMBER=3
[2025-11-23 17:16:23] Starting ATLAS job with PandaID=6893847580
[2025-11-23 17:16:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 01:30:10]  *** The last 200 lines of the pilot log: ***
[2025-11-24 01:30:10] 2025-11-24 00:29:23,882 | INFO     | cat /etc/os-release:
[2025-11-24 01:30:10] NAME="CentOS Linux"
[2025-11-24 01:30:10] VERSION="7 (Core)"
[2025-11-24 01:30:10] ID="centos"
[2025-11-24 01:30:10] ID_LIKE="rhel fedora"
[2025-11-24 01:30:10] VERSION_ID="7"
[2025-11-24 01:30:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 01:30:10] ANSI_COLOR="0;31"
[2025-11-24 01:30:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 01:30:10] HOME_URL="https://www.centos.org/"
[2025-11-24 01:30:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 01:30:10] 
[2025-11-24 01:30:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 01:30:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 01:30:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 01:30:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 01:30:10] 
[2025-11-24 01:30:10] 2025-11-24 00:29:23,882 | INFO     | ***************************************
[2025-11-24 01:30:10] 2025-11-24 00:29:24,385 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-11-24 01:30:10] 2025-11-24 00:29:24,398 | INFO     | sufficient remaining disk space (365347995648 B)
[2025-11-24 01:30:10] 2025-11-24 00:29:24,398 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 01:30:10] 2025-11-24 00:29:24,398 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 01:30:10] 2025-11-24 00:29:24,398 | INFO     | update_server=False
[2025-11-24 01:30:10] 2025-11-24 00:29:24,398 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 01:30:10] 2025-11-24 00:29:24,398 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 01:30:10] 2025-11-24 00:29:24,398 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 01:30:10] 2025-11-24 00:29:24,639 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 01:30:10] 2025-11-24 00:29:24,639 | INFO     | aborting loop
[2025-11-24 01:30:10] 2025-11-24 00:29:24,808 | INFO     | all data control threads have been joined
[2025-11-24 01:30:10] 2025-11-24 00:29:25,128 | INFO     | all payload control threads have been joined
[2025-11-24 01:30:10] 2025-11-24 00:29:25,401 | INFO     | [job] queue monitor thread has finished
[2025-11-24 01:30:10] 2025-11-24 00:29:25,403 | INFO     | [job] retrieve thread has finished
[2025-11-24 01:30:10] 2025-11-24 00:29:25,483 | INFO     | [data] copytool_in thread has finished
[2025-11-24 01:30:10] 2025-11-24 00:29:25,486 | INFO     | [payload] validate_post thread has finished
[2025-11-24 01:30:10] 2025-11-24 00:29:25,561 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 01:30:10] 2025-11-24 00:29:25,644 | INFO     | [job] job monitor thread has finished
[2025-11-24 01:30:10] 2025-11-24 00:29:25,814 | INFO     | [data] control thread has finished
[2025-11-24 01:30:10] 2025-11-24 00:29:25,851 | INFO     | all job control threads have been joined
[2025-11-24 01:30:10] 2025-11-24 00:29:25,924 | INFO     | [payload] failed_post thread has finished
[2025-11-24 01:30:10] 2025-11-24 00:29:26,023 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 01:30:10] 2025-11-24 00:29:26,035 | INFO     | [job] validate thread has finished
[2025-11-24 01:30:10] 2025-11-24 00:29:26,134 | INFO     | [payload] control thread has finished
[2025-11-24 01:30:10] 2025-11-24 00:29:26,282 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 01:30:10] 2025-11-24 00:29:26,459 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 01:30:10] 2025-11-24 00:29:26,856 | INFO     | [job] control thread has finished
[2025-11-24 01:30:10] 2025-11-24 00:29:27,567 | INFO     | [data] copytool_out thread has finished
[2025-11-24 01:30:10] 2025-11-24 00:29:28,405 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 01:30:10] 2025-11-24 00:29:34,701 | INFO     | job.realtimelogging is not enabled
[2025-11-24 01:30:10] 2025-11-24 00:29:35,707 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 01:30:10] 2025-11-24 00:29:53,914 | INFO     | PID=2499234 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 01:30:10] 2025-11-24 00:29:53,914 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 01:30:10] 2025-11-24 00:29:53,914 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 01:30:10] 2025-11-24 00:29:53,914 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 01:30:10] 2025-11-24 00:30:03,918 | INFO     | [monitor] cgroup control has ended
[2025-11-24 01:30:10] 2025-11-24 00:30:05,553 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140511017244480)>', '<ExcThread(monitor, started 140510744254208)>']
[2025-11-24 01:30:10] 2025-11-24 00:30:05,975 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 01:30:10] 2025-11-24 00:30:05,975 | INFO     | [monitor] control thread has ended
[2025-11-24 01:30:10] 2025-11-24 00:30:10,564 | INFO     | all workflow threads have been joined
[2025-11-24 01:30:10] 2025-11-24 00:30:10,565 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 01:30:10] 2025-11-24 00:30:10,565 | INFO     | traces error code: 0
[2025-11-24 01:30:10] 2025-11-24 00:30:10,565 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 01:30:10] 2025-11-24 00:30:10,616 [wrapper] ==== pilot stdout END ====
[2025-11-24 01:30:10] 2025-11-24 00:30:10,619 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 01:30:10] 2025-11-24 00:30:10,621 [wrapper] pilotpid: 2499234
[2025-11-24 01:30:10] 2025-11-24 00:30:10,623 [wrapper] Pilot exit status: 0
[2025-11-24 01:30:10] 2025-11-24 00:30:10,630 [wrapper] pandaids: 6893847580
[2025-11-24 01:30:10] 2025-11-24 00:30:10,648 [wrapper] cleanup supervisor_pilot 2558411 2499235
[2025-11-24 01:30:10] 2025-11-24 00:30:10,650 [wrapper] Test setup, not cleaning
[2025-11-24 01:30:10] 2025-11-24 00:30:10,652 [wrapper] apfmon messages muted
[2025-11-24 01:30:10] 2025-11-24 00:30:10,655 [wrapper] ==== wrapper stdout END ====
[2025-11-24 01:30:10] 2025-11-24 00:30:10,657 [wrapper] ==== wrapper stderr END ====
[2025-11-24 01:30:10]  *** Error codes and diagnostics ***
[2025-11-24 01:30:10]     "exeErrorCode": 0,
[2025-11-24 01:30:10]     "exeErrorDiag": "",
[2025-11-24 01:30:10]     "pilotErrorCode": 0,
[2025-11-24 01:30:10]     "pilotErrorDiag": "",
[2025-11-24 01:30:10]  *** Listing of results directory ***
[2025-11-24 01:30:10] total 1317176
[2025-11-24 01:30:10] -rw-r--r-- 1 boinc boinc    576529 Nov 20 11:06 pilot3.tar.gz
[2025-11-24 01:30:10] -rw-r--r-- 1 boinc boinc      5112 Nov 20 11:25 queuedata.json
[2025-11-24 01:30:10] -rwx------ 1 boinc boinc     36292 Nov 20 11:26 runpilot2-wrapper.sh
[2025-11-24 01:30:10] -rw-r--r-- 1 boinc boinc       100 Nov 23 17:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 01:30:10] -rwxr-xr-x 1 boinc boinc      7986 Nov 23 17:16 run_atlas
[2025-11-24 01:30:10] -rw-r--r-- 1 boinc boinc       105 Nov 23 17:16 job.xml
[2025-11-24 01:30:10] -rw-r--r-- 2 boinc boinc 410022155 Nov 23 17:16 EVNT.47493127._000240.pool.root.1
[2025-11-24 01:30:10] -rw-r--r-- 2 boinc boinc    590100 Nov 23 17:16 input.tar.gz
[2025-11-24 01:30:10] -rw-r--r-- 2 boinc boinc     15847 Nov 23 17:16 start_atlas.sh
[2025-11-24 01:30:10] drwxrwx--x 2 boinc boinc      4096 Nov 23 17:16 shared
[2025-11-24 01:30:10] -rw-r--r-- 1 boinc boinc         0 Nov 23 17:16 boinc_setup_complete
[2025-11-24 01:30:10] -rw-r--r-- 1 boinc boinc      6446 Nov 23 17:16 init_data.xml
[2025-11-24 01:30:10] -rw-r--r-- 1 boinc boinc         0 Nov 23 17:16 boinc_lockfile
[2025-11-24 01:30:10] -rw-r--r-- 1 boinc boinc      2786 Nov 23 17:16 pandaJob.out
[2025-11-24 01:30:10] -rw------- 1 boinc boinc    989785 Nov 23 17:16 agis_schedconf.cvmfs.json
[2025-11-24 01:30:10] drwx------ 5 boinc boinc      4096 Nov 23 17:16 pilot3
[2025-11-24 01:30:10] -rw-r--r-- 1 boinc boinc       531 Nov 24 01:25 boinc_task_state.xml
[2025-11-24 01:30:10] -rw------- 1 boinc boinc 924183523 Nov 24 01:28 HITS.47523449._002397.pool.root.1
[2025-11-24 01:30:10] -rw------- 1 boinc boinc        95 Nov 24 01:28 pilot_heartbeat.json
[2025-11-24 01:30:10] -rw------- 1 boinc boinc      1034 Nov 24 01:29 memory_monitor_summary.json
[2025-11-24 01:30:10] -rw------- 1 boinc boinc   1526164 Nov 24 01:29 agis_ddmendpoints.agis.ALL.json
[2025-11-24 01:30:10] -rw------- 1 boinc boinc   1168136 Nov 24 01:29 log.47523449._002397.job.log.tgz.1
[2025-11-24 01:30:10] -rw------- 1 boinc boinc      8559 Nov 24 01:29 heartbeat.json
[2025-11-24 01:30:10] -rw-r--r-- 1 boinc boinc      8192 Nov 24 01:29 boinc_mmap_file
[2025-11-24 01:30:10] -rw-r--r-- 1 boinc boinc        28 Nov 24 01:29 wrapper_checkpoint.txt
[2025-11-24 01:30:10] -rw------- 1 boinc boinc      4824 Nov 24 01:30 pilotlog.txt
[2025-11-24 01:30:10] -rw------- 1 boinc boinc   4163414 Nov 24 01:30 log.47523449._002397.job.log.1
[2025-11-24 01:30:10] -rw------- 1 boinc boinc       353 Nov 24 01:30 output.list
[2025-11-24 01:30:10] -rw-r--r-- 1 boinc boinc       620 Nov 24 01:30 runtime_log
[2025-11-24 01:30:10] -rw------- 1 boinc boinc   5355520 Nov 24 01:30 result.tar.gz
[2025-11-24 01:30:10] -rw-r--r-- 1 boinc boinc      8913 Nov 24 01:30 runtime_log.err
[2025-11-24 01:30:10] -rw------- 1 boinc boinc       668 Nov 24 01:30 62ILDme2Gg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmrSGKDmtfQhfm.diag
[2025-11-24 01:30:10] -rw-r--r-- 1 boinc boinc      8884 Nov 24 01:30 stderr.txt
[2025-11-24 01:30:10] HITS file was successfully produced:
[2025-11-24 01:30:10] -rw------- 1 boinc boinc 924183523 Nov 24 01:28 shared/HITS.pool.root.1
[2025-11-24 01:30:10]  *** Contents of shared directory: ***
[2025-11-24 01:30:10] total 1308776
[2025-11-24 01:30:10] -rw-r--r-- 2 boinc boinc 410022155 Nov 23 17:16 ATLAS.root_0
[2025-11-24 01:30:10] -rw-r--r-- 2 boinc boinc    590100 Nov 23 17:16 input.tar.gz
[2025-11-24 01:30:10] -rw-r--r-- 2 boinc boinc     15847 Nov 23 17:16 start_atlas.sh
[2025-11-24 01:30:10] -rw------- 1 boinc boinc 924183523 Nov 24 01:28 HITS.pool.root.1
[2025-11-24 01:30:10] -rw------- 1 boinc boinc   5355520 Nov 24 01:30 result.tar.gz
01:30:12 (2495514): run_atlas exited; CPU time 87345.661807
01:30:12 (2495514): called boinc_finish(0)

</stderr_txt>
]]>

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