Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:07:00 (1916176): wrapper (7.7.26015): starting
17:07:00 (1916176): wrapper: running run_atlas (--nthreads 4)
[2025-11-21 17:07:00] Arguments: --nthreads 4
[2025-11-21 17:07:00] Threads: 4
[2025-11-21 17:07:00] Checking for CVMFS
[2025-11-21 17:07:00] No cvmfs_config command found, will try listing directly
[2025-11-21 17:07:00] CVMFS is ok
[2025-11-21 17:07:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 17:07:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 17:07:00] Further information can be found at the LHC@home message board.
[2025-11-21 17:07:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 17:07:00] Checking for apptainer binary...
[2025-11-21 17:07:00] which: no apptainer in ((null))
[2025-11-21 17:07:00] apptainer is not installed, using version from CVMFS
[2025-11-21 17:07:00] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 17:07:00] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot116/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2025-11-21 17:07:00] apptainer works
[2025-11-21 17:07:00] Set ATHENA_PROC_NUMBER=4
[2025-11-21 17:07:00] Set ATHENA_CORE_NUMBER=4
[2025-11-21 17:07:00] Starting ATLAS job with PandaID=6893859998
[2025-11-21 17:07:00] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot116/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 09:26:00]  *** The last 200 lines of the pilot log: ***
[2025-11-22 09:26:00] 2025-11-22 08:24:10,604 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-22 09:26:00] 2025-11-22 08:24:10,623 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2683.5994531250003
[2025-11-22 09:26:00] 2025-11-22 08:24:10,646 | INFO     | using path: /scratch/boinc/var/slot116/slots/0/PanDA_Pilot-6893859998/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 09:26:00] 2025-11-22 08:24:10,647 | INFO     | extracted standard info from prmon json
[2025-11-22 09:26:00] 2025-11-22 08:24:10,647 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 09:26:00] 2025-11-22 08:24:10,647 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 09:26:00] 2025-11-22 08:24:10,661 | INFO     | fitting pss+swap vs Time
[2025-11-22 09:26:00] 2025-11-22 08:24:10,662 | INFO     | sum of square deviations: 273481066819.81653
[2025-11-22 09:26:00] 2025-11-22 08:24:10,683 | INFO     | sum of deviations: 939098372436.5542
[2025-11-22 09:26:00] 2025-11-22 08:24:10,683 | INFO     | mean x: 1763770568.0865486
[2025-11-22 09:26:00] 2025-11-22 08:24:10,683 | INFO     | mean y: 2286197.5234619393
[2025-11-22 09:26:00] 2025-11-22 08:24:10,683 | INFO     | intersect: -6054272265.929023
[2025-11-22 09:26:00] 2025-11-22 08:24:10,684 | INFO     | chi2: 4.501467143144872
[2025-11-22 09:26:00] 2025-11-22 08:24:10,685 | INFO     | sum of square deviations: 269225691417.2788
[2025-11-22 09:26:00] 2025-11-22 08:24:10,707 | INFO     | sum of deviations: 1145193638553.526
[2025-11-22 09:26:00] 2025-11-22 08:24:10,707 | INFO     | mean x: 1763770415.587002
[2025-11-22 09:26:00] 2025-11-22 08:24:10,707 | INFO     | mean y: 2293580.397274633
[2025-11-22 09:26:00] 2025-11-22 08:24:10,707 | INFO     | intersect: -7500180084.601212
[2025-11-22 09:26:00] 2025-11-22 08:24:10,708 | INFO     | chi2: 2.147231640282241
[2025-11-22 09:26:00] 2025-11-22 08:24:10,708 | INFO     | current chi2=2.147231640282241 (change=52.299293274811845 %)
[2025-11-22 09:26:00] 2025-11-22 08:24:10,709 | INFO     | sum of square deviations: 265014688939.7409
[2025-11-22 09:26:00] 2025-11-22 08:24:10,731 | INFO     | sum of deviations: 1142820202443.8765
[2025-11-22 09:26:00] 2025-11-22 08:24:10,732 | INFO     | mean x: 1763770263.0874605
[2025-11-22 09:26:00] 2025-11-22 08:24:10,732 | INFO     | mean y: 2293493.073761855
[2025-11-22 09:26:00] 2025-11-22 08:24:10,732 | INFO     | intersect: -7603595437.801405
[2025-11-22 09:26:00] 2025-11-22 08:24:10,733 | INFO     | chi2: 2.1303222479668262
[2025-11-22 09:26:00] 2025-11-22 08:24:10,733 | INFO     | current chi2=2.1303222479668262 (change=0.7874973523206952 %)
[2025-11-22 09:26:00] 2025-11-22 08:24:10,733 | INFO     | right removable region: 948
[2025-11-22 09:26:00] 2025-11-22 08:24:10,734 | INFO     | sum of square deviations: 269225640787.27878
[2025-11-22 09:26:00] 2025-11-22 08:24:10,755 | INFO     | sum of deviations: 744435716313.6526
[2025-11-22 09:26:00] 2025-11-22 08:24:10,755 | INFO     | mean x: 1763770720.587002
[2025-11-22 09:26:00] 2025-11-22 08:24:10,755 | INFO     | mean y: 2293164.004192872
[2025-11-22 09:26:00] 2025-11-22 08:24:10,755 | INFO     | intersect: -4874708580.531254
[2025-11-22 09:26:00] 2025-11-22 08:24:10,756 | INFO     | chi2: 2.4869350820479266
[2025-11-22 09:26:00] 2025-11-22 08:24:10,756 | INFO     | current chi2=2.4869350820479266 (change=44.752788302916 %)
[2025-11-22 09:26:00] 2025-11-22 08:24:10,757 | INFO     | sum of square deviations: 265014704066.08643
[2025-11-22 09:26:00] 2025-11-22 08:24:10,765 | INFO     | time since job start (58596s) is within the limit (172800.0s)
[2025-11-22 09:26:00] 2025-11-22 08:24:10,771 | INFO     | 58597s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-11-22 09:26:00] 2025-11-22 08:24:10,780 | INFO     | sum of deviations: 702851624407.3595
[2025-11-22 09:26:00] 2025-11-22 08:24:10,780 | INFO     | mean x: 1763770873.085353
[2025-11-22 09:26:00] 2025-11-22 08:24:10,780 | INFO     | mean y: 2294669.551106428
[2025-11-22 09:26:00] 2025-11-22 08:24:10,780 | INFO     | intersect: -4675442845.425769
[2025-11-22 09:26:00] 2025-11-22 08:24:10,781 | INFO     | chi2: 2.4467299586434805
[2025-11-22 09:26:00] 2025-11-22 08:24:10,781 | INFO     | current chi2=2.4467299586434805 (change=1.6166535143867997 %)
[2025-11-22 09:26:00] 2025-11-22 08:24:10,781 | INFO     | left removable region: 20
[2025-11-22 09:26:00] 2025-11-22 08:24:10,782 | INFO     | sum of square deviations: 247807981929.7761
[2025-11-22 09:26:00] 2025-11-22 08:24:10,801 | INFO     | sum of deviations: 849511740616.0181
[2025-11-22 09:26:00] 2025-11-22 08:24:10,801 | INFO     | mean x: 1763770842.5818965
[2025-11-22 09:26:00] 2025-11-22 08:24:10,802 | INFO     | mean y: 2304100.2629310344
[2025-11-22 09:26:00] 2025-11-22 08:24:10,802 | INFO     | intersect: -6044087250.255105
[2025-11-22 09:26:00] 2025-11-22 08:24:10,803 | INFO     | chi2: 0.042976776693618546
[2025-11-22 09:26:00] 2025-11-22 08:24:10,803 | INFO     | current memory leak: 3.43 B/s (using 928 data points, chi2=0.04)
[2025-11-22 09:26:00] 2025-11-22 08:24:10,804 | INFO     | could have reported an average CPU frequency of 2676 MHz (36 samples)
[2025-11-22 09:26:00] 2025-11-22 08:24:10,804 | INFO     | ..............................
[2025-11-22 09:26:00] 2025-11-22 08:24:10,804 | INFO     | . Timing measurements:
[2025-11-22 09:26:00] 2025-11-22 08:24:10,804 | INFO     | . get job = 0 s
[2025-11-22 09:26:00] 2025-11-22 08:24:10,804 | INFO     | . initial setup = 1 s
[2025-11-22 09:26:00] 2025-11-22 08:24:10,805 | INFO     | . payload setup = 25 s
[2025-11-22 09:26:00] 2025-11-22 08:24:10,805 | INFO     | . stage-in = 0 s
[2025-11-22 09:26:00] 2025-11-22 08:24:10,805 | INFO     | . payload execution = 58508 s
[2025-11-22 09:26:00] 2025-11-22 08:24:10,805 | INFO     | . stage-out = 2 s
[2025-11-22 09:26:00] 2025-11-22 08:24:10,805 | INFO     | . log creation = 0 s
[2025-11-22 09:26:00] 2025-11-22 08:24:10,805 | INFO     | ..............................
[2025-11-22 09:26:00] 2025-11-22 08:24:10,897 | INFO     | 
[2025-11-22 09:26:00] 2025-11-22 08:24:10,897 | INFO     | job summary report
[2025-11-22 09:26:00] 2025-11-22 08:24:10,897 | INFO     | --------------------------------------------------
[2025-11-22 09:26:00] 2025-11-22 08:24:10,897 | INFO     | PanDA job id: 6893859998
[2025-11-22 09:26:00] 2025-11-22 08:24:10,898 | INFO     | task id: 47523449
[2025-11-22 09:26:00] 2025-11-22 08:24:10,898 | INFO     | errors: (none)
[2025-11-22 09:26:00] 2025-11-22 08:24:10,898 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 09:26:00] 2025-11-22 08:24:10,898 | INFO     | pilot state: finished 
[2025-11-22 09:26:00] 2025-11-22 08:24:10,898 | INFO     | transexitcode: 0
[2025-11-22 09:26:00] 2025-11-22 08:24:10,898 | INFO     | exeerrorcode: 0
[2025-11-22 09:26:00] 2025-11-22 08:24:10,898 | INFO     | exeerrordiag: 
[2025-11-22 09:26:00] 2025-11-22 08:24:10,898 | INFO     | exitcode: 0
[2025-11-22 09:26:00] 2025-11-22 08:24:10,898 | INFO     | exitmsg: OK
[2025-11-22 09:26:00] 2025-11-22 08:24:10,898 | INFO     | cpuconsumptiontime: 227498 s
[2025-11-22 09:26:00] 2025-11-22 08:24:10,898 | INFO     | nevents: 1000
[2025-11-22 09:26:00] 2025-11-22 08:24:10,898 | INFO     | neventsw: 0
[2025-11-22 09:26:00] 2025-11-22 08:24:10,898 | INFO     | pid: 1928973
[2025-11-22 09:26:00] 2025-11-22 08:24:10,899 | INFO     | pgrp: 1928973
[2025-11-22 09:26:00] 2025-11-22 08:24:10,899 | INFO     | corecount: 4
[2025-11-22 09:26:00] 2025-11-22 08:24:10,899 | INFO     | event service: False
[2025-11-22 09:26:00] 2025-11-22 08:24:10,899 | INFO     | sizes: {0: 2298597, 1: 2298796, 2: 2298796, 12: 2298824, 18: 2299114, 23: 2299142, 58538: 2353806, 58542: 2362824, 58544: 2362880, 58552: 2363126}
[2025-11-22 09:26:00] 2025-11-22 08:24:10,899 | INFO     | --------------------------------------------------
[2025-11-22 09:26:00] 2025-11-22 08:24:10,899 | INFO     | 
[2025-11-22 09:26:00] 2025-11-22 08:24:10,899 | INFO     | executing command: ls -lF /scratch/boinc/var/slot116/slots/0
[2025-11-22 09:26:00] 2025-11-22 08:24:10,927 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 09:26:00] 2025-11-22 08:24:10,927 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 09:26:00] 2025-11-22 08:24:10,927 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 09:26:00] 2025-11-22 08:24:10,927 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 09:26:00] 2025-11-22 08:24:10,927 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 09:26:00] 2025-11-22 08:24:10,927 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 09:26:00] 2025-11-22 08:24:10,927 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 09:26:00] 2025-11-22 08:24:10,928 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 09:26:00] 2025-11-22 08:24:10,928 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 09:26:00] 2025-11-22 08:24:10,928 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 09:26:00] 2025-11-22 08:24:10,928 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 09:26:00] 2025-11-22 08:24:10,928 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 09:26:00] 2025-11-22 08:24:10,928 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 09:26:00] 2025-11-22 08:24:10,928 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 09:26:00] 2025-11-22 08:24:10,928 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 09:26:00] 2025-11-22 08:24:10,928 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 09:26:00] 2025-11-22 08:24:10,928 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 09:26:00] 2025-11-22 08:24:10,928 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 09:26:00] 2025-11-22 08:24:10,928 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 09:26:00] 2025-11-22 08:24:10,929 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 09:26:00] 2025-11-22 08:24:10,929 | INFO     | job 6893859998 has completed (purged errors)
[2025-11-22 09:26:00] 2025-11-22 08:24:10,929 | INFO     | overall cleanup function is called
[2025-11-22 09:26:00] 2025-11-22 08:24:11,945 | INFO     | --- collectZombieJob: --- 10, [1928973]
[2025-11-22 09:26:00] 2025-11-22 08:24:11,946 | INFO     | zombie collector waiting for pid 1928973
[2025-11-22 09:26:00] 2025-11-22 08:24:11,946 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 09:26:00] 2025-11-22 08:24:11,946 | INFO     | collected zombie processes
[2025-11-22 09:26:00] 2025-11-22 08:24:11,946 | INFO     | will attempt to kill all subprocesses of pid=1928973
[2025-11-22 09:26:00] 2025-11-22 08:24:12,756 | INFO     | process IDs to be killed: [1928973] (in reverse order)
[2025-11-22 09:26:00] 2025-11-22 08:24:13,002 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 09:26:00] 2025-11-22 08:24:13,002 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 09:26:00] 2025-11-22 08:24:13,037 | INFO     | did not find any defunct processes belonging to 1928973
[2025-11-22 09:26:00] 2025-11-22 08:24:13,071 | INFO     | did not find any defunct processes belonging to 1928973
[2025-11-22 09:26:00] 2025-11-22 08:24:13,072 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 09:26:00] 2025-11-22 08:24:13,072 | INFO     | ready for new job
[2025-11-22 09:26:00] 2025-11-22 08:24:13,072 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 09:26:00] 2025-11-22 08:24:13,078 | INFO     | ***************************************
[2025-11-22 09:26:00] 2025-11-22 08:24:13,078 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 09:26:00] 2025-11-22 08:24:13,079 | INFO     | ***************************************
[2025-11-22 09:26:00] 2025-11-22 08:24:13,079 | INFO     | 
[2025-11-22 09:26:00] 2025-11-22 08:24:13,087 | INFO     | architecture information:
[2025-11-22 09:26:00] 2025-11-22 08:24:13,088 | INFO     | executing command: cat /etc/os-release
[2025-11-22 09:26:00] 2025-11-22 08:24:13,114 | INFO     | cat /etc/os-release:
[2025-11-22 09:26:00] NAME="CentOS Linux"
[2025-11-22 09:26:00] VERSION="7 (Core)"
[2025-11-22 09:26:00] ID="centos"
[2025-11-22 09:26:00] ID_LIKE="rhel fedora"
[2025-11-22 09:26:00] VERSION_ID="7"
[2025-11-22 09:26:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 09:26:00] ANSI_COLOR="0;31"
[2025-11-22 09:26:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 09:26:00] HOME_URL="https://www.centos.org/"
[2025-11-22 09:26:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 09:26:00] 
[2025-11-22 09:26:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 09:26:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 09:26:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 09:26:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 09:26:00] 
[2025-11-22 09:26:00] 2025-11-22 08:24:13,115 | INFO     | ***************************************
[2025-11-22 09:26:00] 2025-11-22 08:24:13,618 | INFO     | executing command: df -mP /scratch/boinc/var/slot116/slots/0
[2025-11-22 09:26:00] 2025-11-22 08:24:13,643 | INFO     | sufficient remaining disk space (3302220627968 B)
[2025-11-22 09:26:00] 2025-11-22 08:24:13,644 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 09:26:00] 2025-11-22 08:24:13,644 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 09:26:00] 2025-11-22 08:24:13,644 | INFO     | update_server=False
[2025-11-22 09:26:00] 2025-11-22 08:24:13,644 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 09:26:00] 2025-11-22 08:24:13,644 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 09:26:00] 2025-11-22 08:24:13,645 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 09:26:00] 2025-11-22 08:24:13,645 | INFO     | aborting loop
[2025-11-22 09:26:00] 2025-11-22 08:24:13,648 | INFO     | all payload control threads have been joined
[2025-11-22 09:26:00] 2025-11-22 08:24:13,702 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 09:26:00] 2025-11-22 08:24:14,542 | INFO     | all data control threads have been joined
[2025-11-22 09:26:00] 2025-11-22 08:24:14,647 | INFO     | [job] retrieve thread has finished
[2025-11-22 09:26:00] 2025-11-22 08:24:14,651 | INFO     | [job] job monitor thread has finished
[2025-11-22 09:26:00] 2025-11-22 08:24:14,654 | INFO     | [payload] control thread has finished
[2025-11-22 09:26:00] 2025-11-22 08:24:14,853 | INFO     | all job control threads have been joined
[2025-11-22 09:26:00] 2025-11-22 08:24:14,936 | INFO     | [job] validate thread has finished
[2025-11-22 09:26:00] 2025-11-22 08:24:15,423 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 09:26:00] 2025-11-22 08:24:15,541 | INFO     | [payload] failed_post thread has finished
[2025-11-22 09:26:00] 2025-11-22 08:24:15,547 | INFO     | [data] control thread has finished
[2025-11-22 09:26:00] 2025-11-22 08:24:15,684 | INFO     | [data] copytool_in thread has finished
[2025-11-22 09:26:00] 2025-11-22 08:24:15,708 | INFO     | [data] copytool_out thread has finished
[2025-11-22 09:26:00] 2025-11-22 08:24:15,795 | INFO     | [payload] validate_post thread has finished
[2025-11-22 09:26:00] 2025-11-22 08:24:15,857 | INFO     | [job] control thread has finished
[2025-11-22 09:26:00] 2025-11-22 08:24:15,911 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 09:26:00] 2025-11-22 08:24:15,989 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 09:26:00] 2025-11-22 08:24:16,076 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 09:26:00] 2025-11-22 08:24:16,912 | INFO     | [job] queue monitor thread has finished
[2025-11-22 09:26:00] 2025-11-22 08:24:17,651 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 09:26:00] 2025-11-22 08:24:24,396 | INFO     | job.realtimelogging is not enabled
[2025-11-22 09:26:00] 2025-11-22 08:24:25,401 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 09:26:00] 2025-11-22 08:24:44,837 | INFO     | PID=1921102 has CPU usage=5.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 09:26:00] 2025-11-22 08:24:44,838 | INFO     | .. there are 9 such processes running
[2025-11-22 09:26:00] 2025-11-22 08:24:44,839 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 09:26:00] 2025-11-22 08:24:44,839 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 09:26:00] 2025-11-22 08:24:44,839 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 09:26:00] 2025-11-22 08:25:11,190 | INFO     | [monitor] cgroup control has ended
[2025-11-22 09:26:00] 2025-11-22 08:25:12,071 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22587007760192)>', '<ExcThread(monitor, started 22586767402752)>']
[2025-11-22 09:26:00] 2025-11-22 08:25:12,973 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 09:26:00] 2025-11-22 08:25:12,974 | INFO     | [monitor] control thread has ended
[2025-11-22 09:26:00] 2025-11-22 08:25:17,096 | INFO     | all workflow threads have been joined
[2025-11-22 09:26:00] 2025-11-22 08:25:17,097 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 09:26:00] 2025-11-22 08:25:17,097 | INFO     | traces error code: 0
[2025-11-22 09:26:00] 2025-11-22 08:25:17,097 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 09:26:00] 2025-11-22 08:25:17,247 [wrapper] ==== pilot stdout END ====
[2025-11-22 09:26:00] 2025-11-22 08:25:17,250 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 09:26:00] 2025-11-22 08:25:17,255 [wrapper] pilotpid: 1921102
[2025-11-22 09:26:00] 2025-11-22 08:25:17,259 [wrapper] Pilot exit status: 0
[2025-11-22 09:26:00] 2025-11-22 08:25:17,273 [wrapper] pandaids: 6893859998
[2025-11-22 09:26:00] 2025-11-22 08:25:17,461 [wrapper] cleanup supervisor_pilot 3401578 1921103
[2025-11-22 09:26:00] 2025-11-22 08:25:17,465 [wrapper] Test setup, not cleaning
[2025-11-22 09:26:00] 2025-11-22 08:25:17,469 [wrapper] apfmon messages muted
[2025-11-22 09:26:00] 2025-11-22 08:25:17,472 [wrapper] ==== wrapper stdout END ====
[2025-11-22 09:26:00] 2025-11-22 08:25:17,475 [wrapper] ==== wrapper stderr END ====
[2025-11-22 09:26:00]  *** Error codes and diagnostics ***
[2025-11-22 09:26:00]     "exeErrorCode": 0,
[2025-11-22 09:26:00]     "exeErrorDiag": "",
[2025-11-22 09:26:00]     "pilotErrorCode": 0,
[2025-11-22 09:26:00]     "pilotErrorDiag": "",
[2025-11-22 09:26:00]  *** Listing of results directory ***
[2025-11-22 09:26:00] total 1330792
[2025-11-22 09:26:00] -rw-r--r-- 1 boinc boinc    576529 Nov 20 14:12 pilot3.tar.gz
[2025-11-22 09:26:00] -rwx------ 1 boinc boinc     36292 Nov 20 14:33 runpilot2-wrapper.sh
[2025-11-22 09:26:00] -rw-r--r-- 1 boinc boinc      5112 Nov 20 14:33 queuedata.json
[2025-11-22 09:26:00] -rw-r--r-- 1 boinc boinc       100 Nov 21 17:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 09:26:00] -rwxr-xr-x 1 boinc boinc      7986 Nov 21 17:06 run_atlas
[2025-11-22 09:26:00] -rw-r--r-- 1 boinc boinc       105 Nov 21 17:06 job.xml
[2025-11-22 09:26:00] -rw-r--r-- 2 boinc boinc 411364982 Nov 21 17:07 EVNT.47493127._000538.pool.root.1
[2025-11-22 09:26:00] -rw-r--r-- 1 boinc boinc      6686 Nov 21 17:07 init_data.xml
[2025-11-22 09:26:00] -rw-r--r-- 2 boinc boinc     15847 Nov 21 17:07 start_atlas.sh
[2025-11-22 09:26:00] drwxrwx--x 2 boinc boinc      4096 Nov 21 17:07 shared
[2025-11-22 09:26:00] -rw-r--r-- 2 boinc boinc    590094 Nov 21 17:07 input.tar.gz
[2025-11-22 09:26:00] -rw-r--r-- 1 boinc boinc         0 Nov 21 17:07 boinc_lockfile
[2025-11-22 09:26:00] -rw-r--r-- 1 boinc boinc      2785 Nov 21 17:07 pandaJob.out
[2025-11-22 09:26:00] -rw------- 1 boinc boinc    989817 Nov 21 17:07 agis_schedconf.cvmfs.json
[2025-11-22 09:26:00] drwx------ 5 boinc boinc      4096 Nov 21 17:07 pilot3
[2025-11-22 09:26:00] -rw-r--r-- 1 boinc boinc       532 Nov 22 09:16 boinc_task_state.xml
[2025-11-22 09:26:00] -rw------- 1 boinc boinc 928004459 Nov 22 09:23 HITS.47523449._005373.pool.root.1
[2025-11-22 09:26:00] -rw------- 1 boinc boinc      1040 Nov 22 09:23 memory_monitor_summary.json
[2025-11-22 09:26:00] -rw------- 1 boinc boinc   1526164 Nov 22 09:23 agis_ddmendpoints.agis.ALL.json
[2025-11-22 09:26:00] -rw------- 1 boinc boinc   1694939 Nov 22 09:24 log.47523449._005373.job.log.tgz.1
[2025-11-22 09:26:00] -rw------- 1 boinc boinc      8593 Nov 22 09:24 heartbeat.json
[2025-11-22 09:26:00] -rw------- 1 boinc boinc        95 Nov 22 09:24 pilot_heartbeat.json
[2025-11-22 09:26:00] -rw------- 1 boinc boinc      4907 Nov 22 09:25 pilotlog.txt
[2025-11-22 09:26:00] -rw------- 1 boinc boinc   8026679 Nov 22 09:25 log.47523449._005373.job.log.1
[2025-11-22 09:26:00] -rw------- 1 boinc boinc       353 Nov 22 09:25 output.list
[2025-11-22 09:26:00] -rw-r--r-- 1 boinc boinc       620 Nov 22 09:25 runtime_log
[2025-11-22 09:26:00] -rw------- 1 boinc boinc   9738240 Nov 22 09:25 result.tar.gz
[2025-11-22 09:26:00] -rw-r--r-- 1 boinc boinc      9223 Nov 22 09:25 runtime_log.err
[2025-11-22 09:26:00] -rw------- 1 boinc boinc       670 Nov 22 09:25 CeHLDmKyJg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmlxHKDmZJIhSo.diag
[2025-11-22 09:26:00] -rw-r--r-- 1 boinc boinc        28 Nov 22 09:25 wrapper_checkpoint.txt
[2025-11-22 09:26:00] -rw-r--r-- 1 boinc boinc      8192 Nov 22 09:26 boinc_mmap_file
[2025-11-22 09:26:00] -rw-r--r-- 1 boinc boinc     21127 Nov 22 09:26 stderr.txt
[2025-11-22 09:26:00] HITS file was successfully produced:
[2025-11-22 09:26:00] -rw------- 1 boinc boinc 928004459 Nov 22 09:23 shared/HITS.pool.root.1
[2025-11-22 09:26:00]  *** Contents of shared directory: ***
[2025-11-22 09:26:00] total 1318096
[2025-11-22 09:26:00] -rw-r--r-- 2 boinc boinc 411364982 Nov 21 17:07 ATLAS.root_0
[2025-11-22 09:26:00] -rw-r--r-- 2 boinc boinc     15847 Nov 21 17:07 start_atlas.sh
[2025-11-22 09:26:00] -rw-r--r-- 2 boinc boinc    590094 Nov 21 17:07 input.tar.gz
[2025-11-22 09:26:00] -rw------- 1 boinc boinc 928004459 Nov 22 09:23 HITS.pool.root.1
[2025-11-22 09:26:00] -rw------- 1 boinc boinc   9738240 Nov 22 09:25 result.tar.gz
09:26:01 (1916176): run_atlas exited; CPU time 230527.311596
09:26:01 (1916176): called boinc_finish(0)

</stderr_txt>
]]>

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