Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:03:26 (643742): wrapper (7.7.26015): starting
01:03:26 (643742): wrapper: running run_atlas (--nthreads 4)
[2025-11-23 01:03:26] Arguments: --nthreads 4
[2025-11-23 01:03:26] Threads: 4
[2025-11-23 01:03:26] Checking for CVMFS
[2025-11-23 01:03:26] No cvmfs_config command found, will try listing directly
[2025-11-23 01:03:26] CVMFS is ok
[2025-11-23 01:03:26] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 01:03:26] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 01:03:26] Further information can be found at the LHC@home message board.
[2025-11-23 01:03:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 01:03:26] Checking for apptainer binary...
[2025-11-23 01:03:26] which: no apptainer in ((null))
[2025-11-23 01:03:26] apptainer is not installed, using version from CVMFS
[2025-11-23 01:03:26] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 01:03:26] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot116/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut15.grid.cesnet.cz
[2025-11-23 01:03:26] apptainer works
[2025-11-23 01:03:26] Set ATHENA_PROC_NUMBER=4
[2025-11-23 01:03:26] Set ATHENA_CORE_NUMBER=4
[2025-11-23 01:03:26] Starting ATLAS job with PandaID=6893859523
[2025-11-23 01:03:26] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot116/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 18:14:06]  *** The last 200 lines of the pilot log: ***
[2025-11-23 18:14:06] 2025-11-23 16:40:27,671 | INFO     | monitor loop #3944: job 0:6893859523 is in state 'finished'
[2025-11-23 18:14:06] 2025-11-23 16:40:27,672 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 18:14:06] 2025-11-23 16:40:27,844 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-23 18:14:06] 2025-11-23 16:40:27,868 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2666.460078125
[2025-11-23 18:14:06] 2025-11-23 16:40:27,896 | INFO     | using path: /scratch/boinc/var/slot116/slots/0/PanDA_Pilot-6893859523/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 18:14:06] 2025-11-23 16:40:27,897 | INFO     | extracted standard info from prmon json
[2025-11-23 18:14:06] 2025-11-23 16:40:27,897 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 18:14:06] 2025-11-23 16:40:27,897 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 18:14:06] 2025-11-23 16:40:27,914 | INFO     | fitting pss+swap vs Time
[2025-11-23 18:14:06] 2025-11-23 16:40:27,915 | INFO     | sum of square deviations: 291849406447.26025
[2025-11-23 18:14:06] 2025-11-23 16:40:27,941 | INFO     | sum of deviations: 726229622376.8516
[2025-11-23 18:14:06] 2025-11-23 16:40:27,941 | INFO     | mean x: 1763886113.5765307
[2025-11-23 18:14:06] 2025-11-23 16:40:27,941 | INFO     | mean y: 2275121.5153061226
[2025-11-23 18:14:06] 2025-11-23 16:40:27,941 | INFO     | intersect: -4386928069.857096
[2025-11-23 18:14:06] 2025-11-23 16:40:27,942 | INFO     | chi2: 3.9346160136308193
[2025-11-23 18:14:06] 2025-11-23 16:40:27,944 | INFO     | sum of square deviations: 287405122737.2307
[2025-11-23 18:14:06] 2025-11-23 16:40:27,965 | INFO     | sum of deviations: 933230409409.1542
[2025-11-23 18:14:06] 2025-11-23 16:40:27,965 | INFO     | mean x: 1763885961.0769231
[2025-11-23 18:14:06] 2025-11-23 16:40:27,965 | INFO     | mean y: 2282220.597948718
[2025-11-23 18:14:06] 2025-11-23 16:40:27,965 | INFO     | intersect: -5725214916.298552
[2025-11-23 18:14:06] 2025-11-23 16:40:27,966 | INFO     | chi2: 1.7923048742681753
[2025-11-23 18:14:06] 2025-11-23 16:40:27,966 | INFO     | current chi2=1.7923048742681753 (change=54.447781738827 %)
[2025-11-23 18:14:06] 2025-11-23 16:40:27,967 | INFO     | sum of square deviations: 283006188714.7013
[2025-11-23 18:14:06] 2025-11-23 16:40:27,988 | INFO     | sum of deviations: 958925808665.9398
[2025-11-23 18:14:06] 2025-11-23 16:40:27,988 | INFO     | mean x: 1763885808.5773196
[2025-11-23 18:14:06] 2025-11-23 16:40:27,988 | INFO     | mean y: 2283109.660824742
[2025-11-23 18:14:06] 2025-11-23 16:40:27,988 | INFO     | intersect: -5974390520.927228
[2025-11-23 18:14:06] 2025-11-23 16:40:27,989 | INFO     | chi2: 1.7055543930760335
[2025-11-23 18:14:06] 2025-11-23 16:40:27,989 | INFO     | current chi2=1.7055543930760335 (change=4.84016321316781 %)
[2025-11-23 18:14:06] 2025-11-23 16:40:27,989 | INFO     | right removable region: 969
[2025-11-23 18:14:06] 2025-11-23 16:40:27,991 | INFO     | sum of square deviations: 287405076987.23096
[2025-11-23 18:14:06] 2025-11-23 16:40:28,012 | INFO     | sum of deviations: 571963712302.7699
[2025-11-23 18:14:06] 2025-11-23 16:40:28,012 | INFO     | mean x: 1763886266.0769231
[2025-11-23 18:14:06] 2025-11-23 16:40:28,012 | INFO     | mean y: 2280403.283076923
[2025-11-23 18:14:06] 2025-11-23 16:40:28,012 | INFO     | intersect: -3508022711.0563107
[2025-11-23 18:14:06] 2025-11-23 16:40:28,014 | INFO     | chi2: 2.3212872688339723
[2025-11-23 18:14:06] 2025-11-23 16:40:28,014 | INFO     | current chi2=2.3212872688339723 (change=41.00346105459184 %)
[2025-11-23 18:14:06] 2025-11-23 16:40:28,015 | INFO     | sum of square deviations: 283006097214.7011
[2025-11-23 18:14:06] 2025-11-23 16:40:28,035 | INFO     | sum of deviations: 563263399506.2996
[2025-11-23 18:14:06] 2025-11-23 16:40:28,035 | INFO     | mean x: 1763886418.5773196
[2025-11-23 18:14:06] 2025-11-23 16:40:28,036 | INFO     | mean y: 2280704.3226804123
[2025-11-23 18:14:06] 2025-11-23 16:40:28,036 | INFO     | intersect: -3508359773.9180207
[2025-11-23 18:14:06] 2025-11-23 16:40:28,037 | INFO     | chi2: 2.3196582500902494
[2025-11-23 18:14:06] 2025-11-23 16:40:28,037 | INFO     | current chi2=2.3196582500902494 (change=0.07017738672823491 %)
[2025-11-23 18:14:06] 2025-11-23 16:40:28,037 | INFO     | left removable region: 20
[2025-11-23 18:14:06] 2025-11-23 16:40:28,038 | INFO     | sum of square deviations: 265020452937.0729
[2025-11-23 18:14:06] 2025-11-23 16:40:28,058 | INFO     | sum of deviations: 740266718215.1028
[2025-11-23 18:14:06] 2025-11-23 16:40:28,058 | INFO     | mean x: 1763886388.0790305
[2025-11-23 18:14:06] 2025-11-23 16:40:28,059 | INFO     | mean y: 2290584.0252897786
[2025-11-23 18:14:06] 2025-11-23 16:40:28,059 | INFO     | intersect: -4924674008.090907
[2025-11-23 18:14:06] 2025-11-23 16:40:28,060 | INFO     | chi2: 0.061260962734949624
[2025-11-23 18:14:06] 2025-11-23 16:40:28,060 | INFO     | current memory leak: 2.79 B/s (using 949 data points, chi2=0.06)
[2025-11-23 18:14:06] 2025-11-23 16:40:28,061 | INFO     | could have reported an average CPU frequency of 2701 MHz (36 samples)
[2025-11-23 18:14:06] 2025-11-23 16:40:28,062 | INFO     | ..............................
[2025-11-23 18:14:06] 2025-11-23 16:40:28,062 | INFO     | . Timing measurements:
[2025-11-23 18:14:06] 2025-11-23 16:40:28,062 | INFO     | . get job = 0 s
[2025-11-23 18:14:06] 2025-11-23 16:40:28,062 | INFO     | . initial setup = 1 s
[2025-11-23 18:14:06] 2025-11-23 16:40:28,062 | INFO     | . payload setup = 9 s
[2025-11-23 18:14:06] 2025-11-23 16:40:28,062 | INFO     | . stage-in = 0 s
[2025-11-23 18:14:06] 2025-11-23 16:40:28,062 | INFO     | . payload execution = 59759 s
[2025-11-23 18:14:06] 2025-11-23 16:40:28,062 | INFO     | . stage-out = 2 s
[2025-11-23 18:14:06] 2025-11-23 16:40:28,062 | INFO     | . log creation = 1 s
[2025-11-23 18:14:06] 2025-11-23 16:40:28,062 | INFO     | ..............................
[2025-11-23 18:14:06] 2025-11-23 16:40:28,158 | INFO     | 
[2025-11-23 18:14:06] 2025-11-23 16:40:28,158 | INFO     | job summary report
[2025-11-23 18:14:06] 2025-11-23 16:40:28,158 | INFO     | --------------------------------------------------
[2025-11-23 18:14:06] 2025-11-23 16:40:28,158 | INFO     | PanDA job id: 6893859523
[2025-11-23 18:14:06] 2025-11-23 16:40:28,159 | INFO     | task id: 47523449
[2025-11-23 18:14:06] 2025-11-23 16:40:28,159 | INFO     | errors: (none)
[2025-11-23 18:14:06] 2025-11-23 16:40:28,159 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 18:14:06] 2025-11-23 16:40:28,159 | INFO     | pilot state: finished 
[2025-11-23 18:14:06] 2025-11-23 16:40:28,159 | INFO     | transexitcode: 0
[2025-11-23 18:14:06] 2025-11-23 16:40:28,159 | INFO     | exeerrorcode: 0
[2025-11-23 18:14:06] 2025-11-23 16:40:28,159 | INFO     | exeerrordiag: 
[2025-11-23 18:14:06] 2025-11-23 16:40:28,159 | INFO     | exitcode: 0
[2025-11-23 18:14:06] 2025-11-23 16:40:28,159 | INFO     | exitmsg: OK
[2025-11-23 18:14:06] 2025-11-23 16:40:28,159 | INFO     | cpuconsumptiontime: 230716 s
[2025-11-23 18:14:06] 2025-11-23 16:40:28,159 | INFO     | nevents: 1000
[2025-11-23 18:14:06] 2025-11-23 16:40:28,160 | INFO     | neventsw: 0
[2025-11-23 18:14:06] 2025-11-23 16:40:28,160 | INFO     | pid: 655438
[2025-11-23 18:14:06] 2025-11-23 16:40:28,160 | INFO     | pgrp: 655438
[2025-11-23 18:14:06] 2025-11-23 16:40:28,160 | INFO     | corecount: 4
[2025-11-23 18:14:06] 2025-11-23 16:40:28,160 | INFO     | event service: False
[2025-11-23 18:14:06] 2025-11-23 16:40:28,160 | INFO     | sizes: {0: 2298819, 7: 2299081, 11: 2299109, 59772: 2353896, 59776: 2362970, 59790: 2363160}
[2025-11-23 18:14:06] 2025-11-23 16:40:28,160 | INFO     | --------------------------------------------------
[2025-11-23 18:14:06] 2025-11-23 16:40:28,160 | INFO     | 
[2025-11-23 18:14:06] 2025-11-23 16:40:28,160 | INFO     | executing command: ls -lF /scratch/boinc/var/slot116/slots/0
[2025-11-23 18:14:06] 2025-11-23 16:40:28,193 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 18:14:06] 2025-11-23 16:40:28,194 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 18:14:06] 2025-11-23 16:40:28,194 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 18:14:06] 2025-11-23 16:40:28,194 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 18:14:06] 2025-11-23 16:40:28,194 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 18:14:06] 2025-11-23 16:40:28,194 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 18:14:06] 2025-11-23 16:40:28,194 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 18:14:06] 2025-11-23 16:40:28,194 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 18:14:06] 2025-11-23 16:40:28,194 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 18:14:06] 2025-11-23 16:40:28,195 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 18:14:06] 2025-11-23 16:40:28,195 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 18:14:06] 2025-11-23 16:40:28,195 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 18:14:06] 2025-11-23 16:40:28,195 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 18:14:06] 2025-11-23 16:40:28,195 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 18:14:06] 2025-11-23 16:40:28,195 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 18:14:06] 2025-11-23 16:40:28,195 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 18:14:06] 2025-11-23 16:40:28,195 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 18:14:06] 2025-11-23 16:40:28,195 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 18:14:06] 2025-11-23 16:40:28,195 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 18:14:06] 2025-11-23 16:40:28,196 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 18:14:06] 2025-11-23 16:40:28,196 | INFO     | job 6893859523 has completed (purged errors)
[2025-11-23 18:14:06] 2025-11-23 16:40:28,196 | INFO     | overall cleanup function is called
[2025-11-23 18:14:06] 2025-11-23 16:40:29,213 | INFO     | --- collectZombieJob: --- 10, [655438]
[2025-11-23 18:14:06] 2025-11-23 16:40:29,217 | INFO     | zombie collector waiting for pid 655438
[2025-11-23 18:14:06] 2025-11-23 16:40:29,217 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 18:14:06] 2025-11-23 16:40:29,217 | INFO     | collected zombie processes
[2025-11-23 18:14:06] 2025-11-23 16:40:29,217 | INFO     | will attempt to kill all subprocesses of pid=655438
[2025-11-23 18:14:06] 2025-11-23 16:40:30,083 | INFO     | process IDs to be killed: [655438] (in reverse order)
[2025-11-23 18:14:06] 2025-11-23 16:40:30,352 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 18:14:06] 2025-11-23 16:40:30,352 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 18:14:06] 2025-11-23 16:40:30,386 | INFO     | did not find any defunct processes belonging to 655438
[2025-11-23 18:14:06] 2025-11-23 16:40:30,419 | INFO     | did not find any defunct processes belonging to 655438
[2025-11-23 18:14:06] 2025-11-23 16:40:30,421 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 18:14:06] 2025-11-23 16:40:30,421 | INFO     | ready for new job
[2025-11-23 18:14:06] 2025-11-23 16:40:30,421 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 18:14:06] 2025-11-23 16:40:30,428 | INFO     | ***************************************
[2025-11-23 18:14:06] 2025-11-23 16:40:30,428 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 18:14:06] 2025-11-23 16:40:30,428 | INFO     | ***************************************
[2025-11-23 18:14:06] 2025-11-23 16:40:30,428 | INFO     | 
[2025-11-23 18:14:06] 2025-11-23 16:40:30,437 | INFO     | architecture information:
[2025-11-23 18:14:06] 2025-11-23 16:40:30,438 | INFO     | executing command: cat /etc/os-release
[2025-11-23 18:14:06] 2025-11-23 16:40:30,458 | INFO     | cat /etc/os-release:
[2025-11-23 18:14:06] NAME="CentOS Linux"
[2025-11-23 18:14:06] VERSION="7 (Core)"
[2025-11-23 18:14:06] ID="centos"
[2025-11-23 18:14:06] ID_LIKE="rhel fedora"
[2025-11-23 18:14:06] VERSION_ID="7"
[2025-11-23 18:14:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 18:14:06] ANSI_COLOR="0;31"
[2025-11-23 18:14:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 18:14:06] HOME_URL="https://www.centos.org/"
[2025-11-23 18:14:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 18:14:06] 
[2025-11-23 18:14:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 18:14:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 18:14:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 18:14:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 18:14:06] 
[2025-11-23 18:14:06] 2025-11-23 16:40:30,458 | INFO     | ***************************************
[2025-11-23 18:14:06] 2025-11-23 16:40:30,961 | INFO     | executing command: df -mP /scratch/boinc/var/slot116/slots/0
[2025-11-23 18:14:06] 2025-11-23 16:40:30,990 | INFO     | sufficient remaining disk space (3320323244032 B)
[2025-11-23 18:14:06] 2025-11-23 16:40:30,990 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 18:14:06] 2025-11-23 16:40:30,991 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 18:14:06] 2025-11-23 16:40:30,991 | INFO     | update_server=False
[2025-11-23 18:14:06] 2025-11-23 16:40:30,991 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 18:14:06] 2025-11-23 16:40:31,181 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 18:14:06] 2025-11-23 16:40:31,182 | INFO     | aborting loop
[2025-11-23 18:14:06] 2025-11-23 16:40:31,419 | INFO     | all data control threads have been joined
[2025-11-23 18:14:06] 2025-11-23 16:40:31,756 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 18:14:06] 2025-11-23 16:40:31,996 | INFO     | [job] retrieve thread has finished
[2025-11-23 18:14:06] 2025-11-23 16:40:32,016 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 18:14:06] 2025-11-23 16:40:32,102 | INFO     | [payload] failed_post thread has finished
[2025-11-23 18:14:06] 2025-11-23 16:40:32,187 | INFO     | [job] job monitor thread has finished
[2025-11-23 18:14:06] 2025-11-23 16:40:32,250 | INFO     | all job control threads have been joined
[2025-11-23 18:14:06] 2025-11-23 16:40:32,372 | INFO     | all payload control threads have been joined
[2025-11-23 18:14:06] 2025-11-23 16:40:32,425 | INFO     | [data] control thread has finished
[2025-11-23 18:14:06] 2025-11-23 16:40:32,792 | INFO     | [data] copytool_in thread has finished
[2025-11-23 18:14:06] 2025-11-23 16:40:32,795 | INFO     | [job] validate thread has finished
[2025-11-23 18:14:06] 2025-11-23 16:40:32,885 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 18:14:06] 2025-11-23 16:40:33,028 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 18:14:06] 2025-11-23 16:40:33,167 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 18:14:06] 2025-11-23 16:40:33,255 | INFO     | [job] control thread has finished
[2025-11-23 18:14:06] 2025-11-23 16:40:33,364 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 18:14:06] 2025-11-23 16:40:33,378 | INFO     | [payload] control thread has finished
[2025-11-23 18:14:06] 2025-11-23 16:40:33,405 | INFO     | [payload] validate_post thread has finished
[2025-11-23 18:14:06] 2025-11-23 16:40:33,761 | INFO     | [data] copytool_out thread has finished
[2025-11-23 18:14:06] 2025-11-23 16:40:34,172 | INFO     | [job] queue monitor thread has finished
[2025-11-23 18:14:06] 2025-11-23 16:40:37,369 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 18:14:06] 2025-11-23 16:40:41,096 | INFO     | job.realtimelogging is not enabled
[2025-11-23 18:14:06] 2025-11-23 16:40:42,101 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 18:14:06] 2025-11-23 16:41:00,326 | INFO     | PID=647944 has CPU usage=6.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-23 18:14:06] 2025-11-23 16:41:00,327 | INFO     | .. there are 12 such processes running
[2025-11-23 18:14:06] 2025-11-23 16:41:00,327 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 18:14:06] 2025-11-23 16:41:00,327 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 18:14:06] 2025-11-23 16:41:00,327 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 18:14:06] 2025-11-23 16:41:19,966 | INFO     | [monitor] cgroup control has ended
[2025-11-23 18:14:06] 2025-11-23 16:41:20,024 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23055129143104)>', '<ExcThread(monitor, started 23054885279488)>']
[2025-11-23 18:14:06] 2025-11-23 16:41:20,431 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 18:14:06] 2025-11-23 16:41:20,432 | INFO     | [monitor] control thread has ended
[2025-11-23 18:14:06] 2025-11-23 16:41:25,049 | INFO     | all workflow threads have been joined
[2025-11-23 18:14:06] 2025-11-23 16:41:25,050 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 18:14:06] 2025-11-23 16:41:25,050 | INFO     | traces error code: 0
[2025-11-23 18:14:06] 2025-11-23 16:41:25,050 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 18:14:06] 2025-11-23 16:41:25,203 [wrapper] ==== pilot stdout END ====
[2025-11-23 18:14:06] 2025-11-23 16:41:25,211 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 18:14:06] 2025-11-23 16:41:25,215 [wrapper] pilotpid: 647944
[2025-11-23 18:14:06] 2025-11-23 16:41:25,220 [wrapper] Pilot exit status: 0
[2025-11-23 18:14:06] 2025-11-23 16:41:25,285 [wrapper] pandaids: 6893859523
[2025-11-23 18:14:06] 2025-11-23 16:41:25,488 [wrapper] cleanup supervisor_pilot 2487262 647945
[2025-11-23 18:14:06] 2025-11-23 16:41:25,492 [wrapper] Test setup, not cleaning
[2025-11-23 18:14:06] 2025-11-23 16:41:25,495 [wrapper] apfmon messages muted
[2025-11-23 18:14:06] 2025-11-23 16:41:25,499 [wrapper] ==== wrapper stdout END ====
[2025-11-23 18:14:06] 2025-11-23 16:41:25,502 [wrapper] ==== wrapper stderr END ====
[2025-11-23 18:14:06]  *** Error codes and diagnostics ***
[2025-11-23 18:14:06]     "exeErrorCode": 0,
[2025-11-23 18:14:06]     "exeErrorDiag": "",
[2025-11-23 18:14:06]     "pilotErrorCode": 0,
[2025-11-23 18:14:06]     "pilotErrorDiag": "",
[2025-11-23 18:14:06]  *** Listing of results directory ***
[2025-11-23 18:14:06] total 1338656
[2025-11-23 18:14:06] -rw-r--r-- 1 boinc boinc    576529 Nov 20 14:12 pilot3.tar.gz
[2025-11-23 18:14:06] -rw-r--r-- 1 boinc boinc      5112 Nov 20 14:31 queuedata.json
[2025-11-23 18:14:06] -rwx------ 1 boinc boinc     36292 Nov 20 14:32 runpilot2-wrapper.sh
[2025-11-23 18:14:06] -rw-r--r-- 1 boinc boinc       100 Nov 23 01:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 18:14:06] -rwxr-xr-x 1 boinc boinc      7986 Nov 23 01:03 run_atlas
[2025-11-23 18:14:06] -rw-r--r-- 1 boinc boinc       105 Nov 23 01:03 job.xml
[2025-11-23 18:14:06] -rw-r--r-- 2 boinc boinc 409666831 Nov 23 01:03 EVNT.47493127._000534.pool.root.1
[2025-11-23 18:14:06] -rw-r--r-- 1 boinc boinc      6687 Nov 23 01:03 init_data.xml
[2025-11-23 18:14:06] -rw-r--r-- 2 boinc boinc     15847 Nov 23 01:03 start_atlas.sh
[2025-11-23 18:14:06] drwxrwx--x 2 boinc boinc      4096 Nov 23 01:03 shared
[2025-11-23 18:14:06] -rw-r--r-- 2 boinc boinc    590101 Nov 23 01:03 input.tar.gz
[2025-11-23 18:14:06] -rw-r--r-- 1 boinc boinc         0 Nov 23 01:03 boinc_lockfile
[2025-11-23 18:14:06] -rw-r--r-- 1 boinc boinc      2786 Nov 23 01:03 pandaJob.out
[2025-11-23 18:14:06] -rw------- 1 boinc boinc    989784 Nov 23 01:03 agis_schedconf.cvmfs.json
[2025-11-23 18:14:06] drwx------ 5 boinc boinc      4096 Nov 23 01:03 pilot3
[2025-11-23 18:14:06] -rw-r--r-- 1 boinc boinc       532 Nov 23 17:30 boinc_task_state.xml
[2025-11-23 18:14:06] -rw------- 1 boinc boinc 937508561 Nov 23 17:39 HITS.47523449._005340.pool.root.1
[2025-11-23 18:14:06] -rw------- 1 boinc boinc      1038 Nov 23 17:40 memory_monitor_summary.json
[2025-11-23 18:14:06] -rw------- 1 boinc boinc   1526164 Nov 23 17:40 agis_ddmendpoints.agis.ALL.json
[2025-11-23 18:14:06] -rw------- 1 boinc boinc   1705029 Nov 23 17:40 log.47523449._005340.job.log.tgz.1
[2025-11-23 18:14:06] -rw------- 1 boinc boinc        95 Nov 23 17:40 pilot_heartbeat.json
[2025-11-23 18:14:06] -rw------- 1 boinc boinc      8592 Nov 23 17:40 heartbeat.json
[2025-11-23 18:14:06] -rw------- 1 boinc boinc      4907 Nov 23 17:41 pilotlog.txt
[2025-11-23 18:14:06] -rw------- 1 boinc boinc   8135356 Nov 23 17:41 log.47523449._005340.job.log.1
[2025-11-23 18:14:06] -rw------- 1 boinc boinc       353 Nov 23 17:41 output.list
[2025-11-23 18:14:06] -rw-r--r-- 1 boinc boinc       620 Nov 23 17:41 runtime_log
[2025-11-23 18:14:06] -rw------- 1 boinc boinc   9861120 Nov 23 17:41 result.tar.gz
[2025-11-23 18:14:06] -rw------- 1 boinc boinc       671 Nov 23 17:41 t35NDmKxJg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmriGKDmF15zLn.diag
[2025-11-23 18:14:06] -rw-r--r-- 1 boinc boinc      9223 Nov 23 17:41 runtime_log.err
[2025-11-23 18:14:06] -rw-r--r-- 1 boinc boinc        28 Nov 23 18:14 wrapper_checkpoint.txt
[2025-11-23 18:14:06] -rw-r--r-- 1 boinc boinc      8192 Nov 23 18:14 boinc_mmap_file
[2025-11-23 18:14:06] -rw-r--r-- 1 boinc boinc     21061 Nov 23 18:14 stderr.txt
[2025-11-23 18:14:06] HITS file was successfully produced:
[2025-11-23 18:14:06] -rw------- 1 boinc boinc 937508561 Nov 23 17:39 shared/HITS.pool.root.1
[2025-11-23 18:14:06]  *** Contents of shared directory: ***
[2025-11-23 18:14:06] total 1325840
[2025-11-23 18:14:06] -rw-r--r-- 2 boinc boinc 409666831 Nov 23 01:03 ATLAS.root_0
[2025-11-23 18:14:06] -rw-r--r-- 2 boinc boinc     15847 Nov 23 01:03 start_atlas.sh
[2025-11-23 18:14:06] -rw-r--r-- 2 boinc boinc    590101 Nov 23 01:03 input.tar.gz
[2025-11-23 18:14:06] -rw------- 1 boinc boinc 937508561 Nov 23 17:39 HITS.pool.root.1
[2025-11-23 18:14:06] -rw------- 1 boinc boinc   9861120 Nov 23 17:41 result.tar.gz
18:14:07 (643742): run_atlas exited; CPU time 233460.009176
18:14:07 (643742): called boinc_finish(0)

</stderr_txt>
]]>

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