Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:03:59 (906915): wrapper (7.7.26015): starting
18:03:59 (906915): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 18:03:59] Arguments: --nthreads 8
[2025-11-20 18:03:59] Threads: 8
[2025-11-20 18:03:59] Checking for CVMFS
[2025-11-20 18:04:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 18:04:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 18:04:00] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 18:04:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 18:04:00] 2.13.2.0 40083 24810 198700 153098 2 120 36435667 39288832 6274 16776704 0 14117758 99.745 8287961 31464 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-20 18:04:00] CVMFS is ok
[2025-11-20 18:04:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 18:04:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 18:04:00] Further information can be found at the LHC@home message board.
[2025-11-20 18:04:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 18:04:00] Checking for apptainer binary...
[2025-11-20 18:04:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 18:04:00] Running /usr/bin/apptainer --version
[2025-11-20 18:04:00] apptainer version 1.4.4-1.el9
[2025-11-20 18:04:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 18:04:00] c-211-19.aglt2.org
[2025-11-20 18:04:00] apptainer works
[2025-11-20 18:04:00] Set ATHENA_PROC_NUMBER=8
[2025-11-20 18:04:00] Set ATHENA_CORE_NUMBER=8
[2025-11-20 18:04:00] Starting ATLAS job with PandaID=6893849974
[2025-11-20 18:04:00] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 00:16:45]  *** The last 200 lines of the pilot log: ***
[2025-11-22 00:16:45] 2025-11-22 05:16:11,990 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 00:16:45] 2025-11-22 05:16:11,990 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 00:16:45] 2025-11-22 05:16:12,035 | INFO     | fitting pss+swap vs Time
[2025-11-22 00:16:45] 2025-11-22 05:16:12,038 | INFO     | sum of square deviations: 1754967480822.592
[2025-11-22 00:16:45] 2025-11-22 05:16:12,130 | INFO     | sum of deviations: 6584053004438.662
[2025-11-22 00:16:45] 2025-11-22 05:16:12,130 | INFO     | mean x: 1763734212.540404
[2025-11-22 00:16:45] 2025-11-22 05:16:12,130 | INFO     | mean y: 3021834.5600448935
[2025-11-22 00:16:45] 2025-11-22 05:16:12,131 | INFO     | intersect: -6613921025.067679
[2025-11-22 00:16:45] 2025-11-22 05:16:12,133 | INFO     | chi2: 9.484717267179864
[2025-11-22 00:16:45] 2025-11-22 05:16:12,135 | INFO     | sum of square deviations: 1740240382688.742
[2025-11-22 00:16:45] 2025-11-22 05:16:12,227 | INFO     | sum of deviations: 7203447014296.4
[2025-11-22 00:16:45] 2025-11-22 05:16:12,227 | INFO     | mean x: 1763734060.048959
[2025-11-22 00:16:45] 2025-11-22 05:16:12,228 | INFO     | mean y: 3028247.535734384
[2025-11-22 00:16:45] 2025-11-22 05:16:12,228 | INFO     | intersect: -7297667090.451341
[2025-11-22 00:16:45] 2025-11-22 05:16:12,230 | INFO     | chi2: 6.409558433035343
[2025-11-22 00:16:45] 2025-11-22 05:16:12,230 | INFO     | current chi2=6.409558433035343 (change=32.422250948750445 %)
[2025-11-22 00:16:45] 2025-11-22 05:16:12,233 | INFO     | sum of square deviations: 1725595828997.245
[2025-11-22 00:16:45] 2025-11-22 05:16:12,322 | INFO     | sum of deviations: 7675751205709.267
[2025-11-22 00:16:45] 2025-11-22 05:16:12,323 | INFO     | mean x: 1763733907.5569978
[2025-11-22 00:16:45] 2025-11-22 05:16:12,323 | INFO     | mean y: 3033162.413092551
[2025-11-22 00:16:45] 2025-11-22 05:16:12,323 | INFO     | intersect: -7842362868.329489
[2025-11-22 00:16:45] 2025-11-22 05:16:12,325 | INFO     | chi2: 4.254203711396092
[2025-11-22 00:16:45] 2025-11-22 05:16:12,326 | INFO     | current chi2=4.254203711396092 (change=33.62719513610161 %)
[2025-11-22 00:16:45] 2025-11-22 05:16:12,328 | INFO     | sum of square deviations: 1711031751759.6711
[2025-11-22 00:16:45] 2025-11-22 05:16:12,418 | INFO     | sum of deviations: 7845096556983.217
[2025-11-22 00:16:45] 2025-11-22 05:16:12,418 | INFO     | mean x: 1763733755.0548954
[2025-11-22 00:16:45] 2025-11-22 05:16:12,418 | INFO     | mean y: 3034934.904923599
[2025-11-22 00:16:45] 2025-11-22 05:16:12,418 | INFO     | intersect: -8083700799.24276
[2025-11-22 00:16:45] 2025-11-22 05:16:12,421 | INFO     | chi2: 3.884023859898255
[2025-11-22 00:16:45] 2025-11-22 05:16:12,421 | INFO     | current chi2=3.884023859898255 (change=8.701507417385896 %)
[2025-11-22 00:16:45] 2025-11-22 05:16:12,421 | INFO     | right removable region: 1766
[2025-11-22 00:16:45] 2025-11-22 05:16:12,423 | INFO     | sum of square deviations: 1740237077708.7412
[2025-11-22 00:16:45] 2025-11-22 05:16:12,513 | INFO     | sum of deviations: 5975868118758.76
[2025-11-22 00:16:45] 2025-11-22 05:16:12,514 | INFO     | mean x: 1763734365.048959
[2025-11-22 00:16:45] 2025-11-22 05:16:12,514 | INFO     | mean y: 3028129.106359032
[2025-11-22 00:16:45] 2025-11-22 05:16:12,514 | INFO     | intersect: -6053528243.047506
[2025-11-22 00:16:45] 2025-11-22 05:16:12,516 | INFO     | chi2: 6.746083549986368
[2025-11-22 00:16:45] 2025-11-22 05:16:12,517 | INFO     | current chi2=6.746083549986368 (change=28.87417347346809 %)
[2025-11-22 00:16:45] 2025-11-22 05:16:12,519 | INFO     | sum of square deviations: 1725589435953.244
[2025-11-22 00:16:45] 2025-11-22 05:16:12,609 | INFO     | sum of deviations: 5777699211220.694
[2025-11-22 00:16:45] 2025-11-22 05:16:12,610 | INFO     | mean x: 1763734517.5569978
[2025-11-22 00:16:45] 2025-11-22 05:16:12,610 | INFO     | mean y: 3030192.3448081263
[2025-11-22 00:16:45] 2025-11-22 05:16:12,610 | INFO     | intersect: -5902388164.173162
[2025-11-22 00:16:45] 2025-11-22 05:16:12,612 | INFO     | chi2: 6.573434077241996
[2025-11-22 00:16:45] 2025-11-22 05:16:12,613 | INFO     | current chi2=6.573434077241996 (change=2.5592548841871556 %)
[2025-11-22 00:16:45] 2025-11-22 05:16:12,613 | INFO     | left removable region: 20
[2025-11-22 00:16:45] 2025-11-22 05:16:12,615 | INFO     | sum of square deviations: 1650752405479.613
[2025-11-22 00:16:45] 2025-11-22 05:16:12,702 | INFO     | sum of deviations: 6768443318880.824
[2025-11-22 00:16:45] 2025-11-22 05:16:12,702 | INFO     | mean x: 1763734334.5859106
[2025-11-22 00:16:45] 2025-11-22 05:16:12,702 | INFO     | mean y: 3046823.277777778
[2025-11-22 00:16:45] 2025-11-22 05:16:12,702 | INFO     | intersect: -7228646938.658803
[2025-11-22 00:16:45] 2025-11-22 05:16:12,705 | INFO     | chi2: 0.7801219954376841
[2025-11-22 00:16:45] 2025-11-22 05:16:12,705 | INFO     | current memory leak: 4.10 B/s (using 1746 data points, chi2=0.78)
[2025-11-22 00:16:45] 2025-11-22 05:16:12,707 | INFO     | could have reported an average CPU frequency of 2900 MHz (63 samples)
[2025-11-22 00:16:45] 2025-11-22 05:16:12,707 | INFO     | ..............................
[2025-11-22 00:16:45] 2025-11-22 05:16:12,707 | INFO     | . Timing measurements:
[2025-11-22 00:16:45] 2025-11-22 05:16:12,707 | INFO     | . get job = 0 s
[2025-11-22 00:16:45] 2025-11-22 05:16:12,707 | INFO     | . initial setup = 2 s
[2025-11-22 00:16:45] 2025-11-22 05:16:12,708 | INFO     | . payload setup = 9 s
[2025-11-22 00:16:45] 2025-11-22 05:16:12,708 | INFO     | . stage-in = 0 s
[2025-11-22 00:16:45] 2025-11-22 05:16:12,708 | INFO     | . payload execution = 108654 s
[2025-11-22 00:16:45] 2025-11-22 05:16:12,708 | INFO     | . stage-out = 18 s
[2025-11-22 00:16:45] 2025-11-22 05:16:12,708 | INFO     | . log creation = 14 s
[2025-11-22 00:16:45] 2025-11-22 05:16:12,708 | INFO     | ..............................
[2025-11-22 00:16:45] 2025-11-22 05:16:12,997 | INFO     | 
[2025-11-22 00:16:45] 2025-11-22 05:16:12,997 | INFO     | job summary report
[2025-11-22 00:16:45] 2025-11-22 05:16:12,997 | INFO     | --------------------------------------------------
[2025-11-22 00:16:45] 2025-11-22 05:16:12,997 | INFO     | PanDA job id: 6893849974
[2025-11-22 00:16:45] 2025-11-22 05:16:12,997 | INFO     | task id: 47523449
[2025-11-22 00:16:45] 2025-11-22 05:16:12,998 | INFO     | errors: (none)
[2025-11-22 00:16:45] 2025-11-22 05:16:12,998 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 00:16:45] 2025-11-22 05:16:12,998 | INFO     | pilot state: finished 
[2025-11-22 00:16:45] 2025-11-22 05:16:12,998 | INFO     | transexitcode: 0
[2025-11-22 00:16:45] 2025-11-22 05:16:12,998 | INFO     | exeerrorcode: 0
[2025-11-22 00:16:45] 2025-11-22 05:16:12,998 | INFO     | exeerrordiag: 
[2025-11-22 00:16:45] 2025-11-22 05:16:12,998 | INFO     | exitcode: 0
[2025-11-22 00:16:45] 2025-11-22 05:16:12,999 | INFO     | exitmsg: OK
[2025-11-22 00:16:45] 2025-11-22 05:16:12,999 | INFO     | cpuconsumptiontime: 485468 s
[2025-11-22 00:16:45] 2025-11-22 05:16:12,999 | INFO     | nevents: 1000
[2025-11-22 00:16:45] 2025-11-22 05:16:12,999 | INFO     | neventsw: 0
[2025-11-22 00:16:45] 2025-11-22 05:16:12,999 | INFO     | pid: 917251
[2025-11-22 00:16:45] 2025-11-22 05:16:12,999 | INFO     | pgrp: 917251
[2025-11-22 00:16:45] 2025-11-22 05:16:12,999 | INFO     | corecount: 8
[2025-11-22 00:16:45] 2025-11-22 05:16:13,000 | INFO     | event service: False
[2025-11-22 00:16:45] 2025-11-22 05:16:13,000 | INFO     | sizes: {0: 2298636, 1: 2298835, 7: 2299097, 12: 2299125, 108668: 2374898, 108686: 2384138, 108689: 2384322, 108700: 2384346}
[2025-11-22 00:16:45] 2025-11-22 05:16:13,000 | INFO     | --------------------------------------------------
[2025-11-22 00:16:45] 2025-11-22 05:16:13,000 | INFO     | 
[2025-11-22 00:16:45] 2025-11-22 05:16:13,000 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-11-22 00:16:45] 2025-11-22 05:16:13,025 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 00:16:45] 2025-11-22 05:16:13,026 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 00:16:45] 2025-11-22 05:16:13,026 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 00:16:45] 2025-11-22 05:16:13,026 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 00:16:45] 2025-11-22 05:16:13,026 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 00:16:45] 2025-11-22 05:16:13,026 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 00:16:45] 2025-11-22 05:16:13,026 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 00:16:45] 2025-11-22 05:16:13,027 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 00:16:45] 2025-11-22 05:16:13,027 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 00:16:45] 2025-11-22 05:16:13,027 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 00:16:45] 2025-11-22 05:16:13,028 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 00:16:45] 2025-11-22 05:16:13,028 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 00:16:45] 2025-11-22 05:16:13,028 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 00:16:45] 2025-11-22 05:16:13,028 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 00:16:45] 2025-11-22 05:16:13,028 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 00:16:45] 2025-11-22 05:16:13,028 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 00:16:45] 2025-11-22 05:16:13,029 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 00:16:45] 2025-11-22 05:16:13,033 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 00:16:45] 2025-11-22 05:16:13,033 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 00:16:45] 2025-11-22 05:16:13,033 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 00:16:45] 2025-11-22 05:16:13,033 | INFO     | job 6893849974 has completed (purged errors)
[2025-11-22 00:16:45] 2025-11-22 05:16:13,033 | INFO     | overall cleanup function is called
[2025-11-22 00:16:45] 2025-11-22 05:16:14,087 | INFO     | --- collectZombieJob: --- 10, [917251]
[2025-11-22 00:16:45] 2025-11-22 05:16:14,087 | INFO     | zombie collector waiting for pid 917251
[2025-11-22 00:16:45] 2025-11-22 05:16:14,087 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 00:16:45] 2025-11-22 05:16:14,087 | INFO     | collected zombie processes
[2025-11-22 00:16:45] 2025-11-22 05:16:14,087 | INFO     | will attempt to kill all subprocesses of pid=917251
[2025-11-22 00:16:45] 2025-11-22 05:16:16,092 | INFO     | process IDs to be killed: [917251] (in reverse order)
[2025-11-22 00:16:45] 2025-11-22 05:16:16,187 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 00:16:45] 2025-11-22 05:16:16,188 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 00:16:45] 2025-11-22 05:16:16,220 | INFO     | did not find any defunct processes belonging to 917251
[2025-11-22 00:16:45] 2025-11-22 05:16:16,248 | INFO     | did not find any defunct processes belonging to 917251
[2025-11-22 00:16:45] 2025-11-22 05:16:16,250 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 00:16:45] 2025-11-22 05:16:16,251 | INFO     | ready for new job
[2025-11-22 00:16:45] 2025-11-22 05:16:16,251 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 00:16:45] 2025-11-22 05:16:16,275 | INFO     | ***************************************
[2025-11-22 00:16:45] 2025-11-22 05:16:16,276 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 00:16:45] 2025-11-22 05:16:16,276 | INFO     | ***************************************
[2025-11-22 00:16:45] 2025-11-22 05:16:16,277 | INFO     | 
[2025-11-22 00:16:45] 2025-11-22 05:16:16,328 | INFO     | architecture information:
[2025-11-22 00:16:45] 2025-11-22 05:16:16,349 | INFO     | executing command: cat /etc/os-release
[2025-11-22 00:16:45] 2025-11-22 05:16:16,377 | INFO     | cat /etc/os-release:
[2025-11-22 00:16:45] NAME="CentOS Linux"
[2025-11-22 00:16:45] VERSION="7 (Core)"
[2025-11-22 00:16:45] ID="centos"
[2025-11-22 00:16:45] ID_LIKE="rhel fedora"
[2025-11-22 00:16:45] VERSION_ID="7"
[2025-11-22 00:16:45] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 00:16:45] ANSI_COLOR="0;31"
[2025-11-22 00:16:45] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 00:16:45] HOME_URL="https://www.centos.org/"
[2025-11-22 00:16:45] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 00:16:45] 
[2025-11-22 00:16:45] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 00:16:45] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 00:16:45] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 00:16:45] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 00:16:45] 
[2025-11-22 00:16:45] 2025-11-22 05:16:16,378 | INFO     | ***************************************
[2025-11-22 00:16:45] 2025-11-22 05:16:16,880 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-11-22 00:16:45] 2025-11-22 05:16:16,902 | INFO     | sufficient remaining disk space (48508174336 B)
[2025-11-22 00:16:45] 2025-11-22 05:16:16,903 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 00:16:45] 2025-11-22 05:16:16,903 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 00:16:45] 2025-11-22 05:16:16,903 | INFO     | update_server=False
[2025-11-22 00:16:45] 2025-11-22 05:16:16,904 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 00:16:45] 2025-11-22 05:16:16,904 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 00:16:45] 2025-11-22 05:16:16,904 | INFO     | aborting loop
[2025-11-22 00:16:45] 2025-11-22 05:16:16,931 | INFO     | all data control threads have been joined
[2025-11-22 00:16:45] 2025-11-22 05:16:16,944 | INFO     | all job control threads have been joined
[2025-11-22 00:16:45] 2025-11-22 05:16:17,058 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 00:16:45] 2025-11-22 05:16:17,351 | INFO     | all payload control threads have been joined
[2025-11-22 00:16:45] 2025-11-22 05:16:17,853 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 00:16:45] 2025-11-22 05:16:17,916 | INFO     | [job] retrieve thread has finished
[2025-11-22 00:16:45] 2025-11-22 05:16:17,925 | INFO     | [job] job monitor thread has finished
[2025-11-22 00:16:45] 2025-11-22 05:16:17,928 | INFO     | [payload] validate_post thread has finished
[2025-11-22 00:16:45] 2025-11-22 05:16:17,936 | INFO     | [data] control thread has finished
[2025-11-22 00:16:45] 2025-11-22 05:16:17,950 | INFO     | [job] control thread has finished
[2025-11-22 00:16:45] 2025-11-22 05:16:18,031 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 00:16:45] 2025-11-22 05:16:18,058 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 00:16:45] 2025-11-22 05:16:18,063 | INFO     | [job] validate thread has finished
[2025-11-22 00:16:45] 2025-11-22 05:16:18,357 | INFO     | [payload] control thread has finished
[2025-11-22 00:16:45] 2025-11-22 05:16:18,371 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 00:16:45] 2025-11-22 05:16:18,490 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 00:16:45] 2025-11-22 05:16:18,764 | INFO     | [data] copytool_in thread has finished
[2025-11-22 00:16:45] 2025-11-22 05:16:18,770 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 00:16:45] 2025-11-22 05:16:19,037 | INFO     | [job] queue monitor thread has finished
[2025-11-22 00:16:45] 2025-11-22 05:16:19,266 | INFO     | [payload] failed_post thread has finished
[2025-11-22 00:16:45] 2025-11-22 05:16:19,866 | INFO     | [data] copytool_out thread has finished
[2025-11-22 00:16:45] 2025-11-22 05:16:21,069 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 00:16:45] 2025-11-22 05:16:32,914 | INFO     | [monitor] cgroup control has ended
[2025-11-22 00:16:45] 2025-11-22 05:16:33,285 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139660051420992)>', '<ExcThread(monitor, started 139659535423232)>']
[2025-11-22 00:16:45] 2025-11-22 05:16:38,311 | INFO     | all workflow threads have been joined
[2025-11-22 00:16:45] 2025-11-22 05:16:38,311 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 00:16:45] 2025-11-22 05:16:38,312 | INFO     | traces error code: 0
[2025-11-22 00:16:45] 2025-11-22 05:16:38,312 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 00:16:45] 2025-11-22 05:16:45,081 | INFO     | PID=910597 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-22 00:16:45] 2025-11-22 05:16:45,081 | INFO     | .. there are 9 such processes running
[2025-11-22 00:16:45] 2025-11-22 05:16:45,083 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 00:16:45] 2025-11-22 05:16:45,083 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 00:16:45] 2025-11-22 05:16:45,083 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 00:16:45] 2025-11-22 05:16:45,083 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 00:16:45] 2025-11-22 05:16:45,083 | INFO     | [monitor] control thread has ended
[2025-11-22 00:16:45] 2025-11-22 05:16:45,292 [wrapper] ==== pilot stdout END ====
[2025-11-22 00:16:45] 2025-11-22 05:16:45,296 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 00:16:45] 2025-11-22 05:16:45,299 [wrapper] pilotpid: 910597
[2025-11-22 00:16:45] 2025-11-22 05:16:45,302 [wrapper] Pilot exit status: 0
[2025-11-22 00:16:45] 2025-11-22 05:16:45,323 [wrapper] pandaids: 6893849974
[2025-11-22 00:16:45] 2025-11-22 05:16:45,408 [wrapper] cleanup supervisor_pilot 3630980 910598
[2025-11-22 00:16:45] 2025-11-22 05:16:45,412 [wrapper] Test setup, not cleaning
[2025-11-22 00:16:45] 2025-11-22 05:16:45,423 [wrapper] apfmon messages muted
[2025-11-22 00:16:45] 2025-11-22 05:16:45,427 [wrapper] ==== wrapper stdout END ====
[2025-11-22 00:16:45] 2025-11-22 05:16:45,432 [wrapper] ==== wrapper stderr END ====
[2025-11-22 00:16:45]  *** Error codes and diagnostics ***
[2025-11-22 00:16:45]     "exeErrorCode": 0,
[2025-11-22 00:16:45]     "exeErrorDiag": "",
[2025-11-22 00:16:45]     "pilotErrorCode": 0,
[2025-11-22 00:16:45]     "pilotErrorDiag": "",
[2025-11-22 00:16:45]  *** Listing of results directory ***
[2025-11-22 00:16:45] total 1341532
[2025-11-22 00:16:45] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 06:00 pilot3.tar.gz
[2025-11-22 00:16:45] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 06:05 queuedata.json
[2025-11-22 00:16:45] -rwx------. 1 boincer umatlas     36292 Nov 20 06:06 runpilot2-wrapper.sh
[2025-11-22 00:16:45] -rw-r--r--. 1 boincer umatlas       100 Nov 20 18:03 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 00:16:45] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 20 18:03 run_atlas
[2025-11-22 00:16:45] -rw-r--r--. 1 boincer umatlas       105 Nov 20 18:03 job.xml
[2025-11-22 00:16:45] -rw-r--r--. 2 boincer umatlas 410840232 Nov 20 18:03 EVNT.47493127._000312.pool.root.1
[2025-11-22 00:16:45] -rw-r--r--. 2 boincer umatlas    590105 Nov 20 18:03 input.tar.gz
[2025-11-22 00:16:45] -rw-r--r--. 2 boincer umatlas     15847 Nov 20 18:03 start_atlas.sh
[2025-11-22 00:16:45] drwxrwx--x. 2 boincer umatlas      4096 Nov 20 18:03 shared
[2025-11-22 00:16:45] -rw-r--r--. 1 boincer umatlas         0 Nov 20 18:03 boinc_lockfile
[2025-11-22 00:16:45] -rw-r--r--. 1 boincer umatlas      2786 Nov 20 18:04 pandaJob.out
[2025-11-22 00:16:45] -rw-------. 1 boincer umatlas        57 Nov 20 18:04 setup.sh.local
[2025-11-22 00:16:45] -rw-------. 1 boincer umatlas    989825 Nov 20 18:04 agis_schedconf.cvmfs.json
[2025-11-22 00:16:45] drwx------. 5 boincer umatlas      4096 Nov 20 18:04 pilot3
[2025-11-22 00:16:45] -rw-r--r--. 1 boincer umatlas       533 Nov 21 23:55 boinc_task_state.xml
[2025-11-22 00:16:45] -rw-r--r--. 1 boincer umatlas      6525 Nov 22 00:10 init_data.xml
[2025-11-22 00:16:45] -rw-------. 1 boincer umatlas 925540562 Nov 22 00:14 HITS.47523449._003120.pool.root.1
[2025-11-22 00:16:45] -rw-------. 1 boincer umatlas      1057 Nov 22 00:15 memory_monitor_summary.json
[2025-11-22 00:16:45] -rw-------. 1 boincer umatlas   1526164 Nov 22 00:15 agis_ddmendpoints.agis.ALL.json
[2025-11-22 00:16:45] -rw-------. 1 boincer umatlas   2732823 Nov 22 00:15 log.47523449._003120.job.log.tgz.1
[2025-11-22 00:16:45] -rw-------. 1 boincer umatlas      8628 Nov 22 00:16 heartbeat.json
[2025-11-22 00:16:45] -rw-r--r--. 1 boincer umatlas      8192 Nov 22 00:16 boinc_mmap_file
[2025-11-22 00:16:45] -rw-r--r--. 1 boincer umatlas        29 Nov 22 00:16 wrapper_checkpoint.txt
[2025-11-22 00:16:45] -rw-------. 1 boincer umatlas        95 Nov 22 00:16 pilot_heartbeat.json
[2025-11-22 00:16:45] -rw-------. 1 boincer umatlas       821 Nov 22 00:16 pilotlog.txt
[2025-11-22 00:16:45] -rw-------. 1 boincer umatlas  13983629 Nov 22 00:16 log.47523449._003120.job.log.1
[2025-11-22 00:16:45] -rw-------. 1 boincer umatlas       353 Nov 22 00:16 output.list
[2025-11-22 00:16:45] -rw-r--r--. 1 boincer umatlas       620 Nov 22 00:16 runtime_log
[2025-11-22 00:16:45] -rw-------. 1 boincer umatlas  16732160 Nov 22 00:16 result.tar.gz
[2025-11-22 00:16:45] -rw-r--r--. 1 boincer umatlas      9344 Nov 22 00:16 runtime_log.err
[2025-11-22 00:16:45] -rw-------. 1 boincer umatlas       663 Nov 22 00:16 HCmKDmZfHg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmraHKDmQEfJOm.diag
[2025-11-22 00:16:45] -rw-r--r--. 1 boincer umatlas     21106 Nov 22 00:16 stderr.txt
[2025-11-22 00:16:45] HITS file was successfully produced:
[2025-11-22 00:16:45] -rw-------. 1 boincer umatlas 925540562 Nov 22 00:14 shared/HITS.pool.root.1
[2025-11-22 00:16:45]  *** Contents of shared directory: ***
[2025-11-22 00:16:45] total 1322004
[2025-11-22 00:16:45] -rw-r--r--. 2 boincer umatlas 410840232 Nov 20 18:03 ATLAS.root_0
[2025-11-22 00:16:45] -rw-r--r--. 2 boincer umatlas    590105 Nov 20 18:03 input.tar.gz
[2025-11-22 00:16:45] -rw-r--r--. 2 boincer umatlas     15847 Nov 20 18:03 start_atlas.sh
[2025-11-22 00:16:45] -rw-------. 1 boincer umatlas 925540562 Nov 22 00:14 HITS.pool.root.1
[2025-11-22 00:16:45] -rw-------. 1 boincer umatlas  16732160 Nov 22 00:16 result.tar.gz
00:16:46 (906915): run_atlas exited; CPU time 487928.410258
00:16:46 (906915): called boinc_finish(0)

</stderr_txt>
]]>

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