Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:06:52 (3113450): wrapper (7.7.26015): starting
22:06:52 (3113450): wrapper: running run_atlas (--nthreads 4)
[2025-11-24 22:06:52] Arguments: --nthreads 4
[2025-11-24 22:06:52] Threads: 4
[2025-11-24 22:06:52] Checking for CVMFS
[2025-11-24 22:06:52] No cvmfs_config command found, will try listing directly
[2025-11-24 22:06:52] CVMFS is ok
[2025-11-24 22:06:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 22:06:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 22:06:52] Further information can be found at the LHC@home message board.
[2025-11-24 22:06:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 22:06:52] Checking for apptainer binary...
[2025-11-24 22:06:52] which: no apptainer in ((null))
[2025-11-24 22:06:52] apptainer is not installed, using version from CVMFS
[2025-11-24 22:06:52] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 22:06:52] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut07.grid.cesnet.cz
[2025-11-24 22:06:52] apptainer works
[2025-11-24 22:06:52] Set ATHENA_PROC_NUMBER=4
[2025-11-24 22:06:52] Set ATHENA_CORE_NUMBER=4
[2025-11-24 22:06:52] Starting ATLAS job with PandaID=6893859511
[2025-11-24 22:06:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 16:26:48]  *** The last 200 lines of the pilot log: ***
[2025-11-25 16:26:48] 2025-11-25 15:24:14,019 | INFO     | monitor loop #4702: job 0:6893859511 is in state 'finished'
[2025-11-25 16:26:48] 2025-11-25 15:24:14,020 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 16:26:48] 2025-11-25 15:24:14,262 | INFO     | time since job start (65828s) is within the limit (172800.0s)
[2025-11-25 16:26:48] 2025-11-25 15:24:15,699 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-25 16:26:48] 2025-11-25 15:24:15,709 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2677.059093749999
[2025-11-25 16:26:48] 2025-11-25 15:24:15,721 | INFO     | using path: /scratch/boinc/var/slot60/slots/0/PanDA_Pilot-6893859511/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 16:26:48] 2025-11-25 15:24:15,722 | INFO     | extracted standard info from prmon json
[2025-11-25 16:26:48] 2025-11-25 15:24:15,722 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 16:26:48] 2025-11-25 15:24:15,723 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 16:26:48] 2025-11-25 15:24:15,741 | INFO     | fitting pss+swap vs Time
[2025-11-25 16:26:48] 2025-11-25 15:24:15,743 | INFO     | sum of square deviations: 389531321448.9989
[2025-11-25 16:26:48] 2025-11-25 15:24:15,766 | INFO     | sum of deviations: 1363756117152.4343
[2025-11-25 16:26:48] 2025-11-25 15:24:15,767 | INFO     | mean x: 1764051335.0009267
[2025-11-25 16:26:48] 2025-11-25 15:24:15,767 | INFO     | mean y: 2295234.56626506
[2025-11-25 16:26:48] 2025-11-25 15:24:15,767 | INFO     | intersect: -6173680012.121089
[2025-11-25 16:26:48] 2025-11-25 15:24:15,768 | INFO     | chi2: 4.32394965691226
[2025-11-25 16:26:48] 2025-11-25 15:24:15,770 | INFO     | sum of square deviations: 384141202086.49927
[2025-11-25 16:26:48] 2025-11-25 15:24:15,793 | INFO     | sum of deviations: 1603323118378.854
[2025-11-25 16:26:48] 2025-11-25 15:24:15,793 | INFO     | mean x: 1764051182.500931
[2025-11-25 16:26:48] 2025-11-25 15:24:15,794 | INFO     | mean y: 2302008.1452513966
[2025-11-25 16:26:48] 2025-11-25 15:24:15,794 | INFO     | intersect: -7360469877.674025
[2025-11-25 16:26:48] 2025-11-25 15:24:15,795 | INFO     | chi2: 1.9154078821936582
[2025-11-25 16:26:48] 2025-11-25 15:24:15,795 | INFO     | current chi2=1.9154078821936582 (change=55.70235469481728 %)
[2025-11-25 16:26:48] 2025-11-25 15:24:15,797 | INFO     | sum of square deviations: 378801037148.99927
[2025-11-25 16:26:48] 2025-11-25 15:24:15,820 | INFO     | sum of deviations: 1654272600949.1619
[2025-11-25 16:26:48] 2025-11-25 15:24:15,820 | INFO     | mean x: 1764051030.0009356
[2025-11-25 16:26:48] 2025-11-25 15:24:15,820 | INFO     | mean y: 2303460.8381665107
[2025-11-25 16:26:48] 2025-11-25 15:24:15,820 | INFO     | intersect: -7701533116.723341
[2025-11-25 16:26:48] 2025-11-25 15:24:15,822 | INFO     | chi2: 1.71621448439604
[2025-11-25 16:26:48] 2025-11-25 15:24:15,822 | INFO     | current chi2=1.71621448439604 (change=10.399528980192354 %)
[2025-11-25 16:26:48] 2025-11-25 15:24:15,822 | INFO     | right removable region: 1068
[2025-11-25 16:26:48] 2025-11-25 15:24:15,823 | INFO     | sum of square deviations: 384141201476.49927
[2025-11-25 16:26:48] 2025-11-25 15:24:15,847 | INFO     | sum of deviations: 1177487996021.059
[2025-11-25 16:26:48] 2025-11-25 15:24:15,847 | INFO     | mean x: 1764051487.500931
[2025-11-25 16:26:48] 2025-11-25 15:24:15,848 | INFO     | mean y: 2300495.9404096836
[2025-11-25 16:26:48] 2025-11-25 15:24:15,848 | INFO     | intersect: -5404954552.233624
[2025-11-25 16:26:48] 2025-11-25 15:24:15,849 | INFO     | chi2: 2.6977380096637065
[2025-11-25 16:26:48] 2025-11-25 15:24:15,849 | INFO     | current chi2=2.6977380096637065 (change=37.609402890454426 %)
[2025-11-25 16:26:48] 2025-11-25 15:24:15,851 | INFO     | sum of square deviations: 378801035928.9992
[2025-11-25 16:26:48] 2025-11-25 15:24:15,874 | INFO     | sum of deviations: 1144129211890.0464
[2025-11-25 16:26:48] 2025-11-25 15:24:15,875 | INFO     | mean x: 1764051640.0009356
[2025-11-25 16:26:48] 2025-11-25 15:24:15,875 | INFO     | mean y: 2301448.9550982225
[2025-11-25 16:26:48] 2025-11-25 15:24:15,875 | INFO     | intersect: -5325833432.349492
[2025-11-25 16:26:48] 2025-11-25 15:24:15,876 | INFO     | chi2: 2.68538785626934
[2025-11-25 16:26:48] 2025-11-25 15:24:15,876 | INFO     | current chi2=2.68538785626934 (change=0.4577966188757583 %)
[2025-11-25 16:26:48] 2025-11-25 15:24:15,877 | INFO     | left removable region: 20
[2025-11-25 16:26:48] 2025-11-25 15:24:15,878 | INFO     | sum of square deviations: 356912595821.999
[2025-11-25 16:26:48] 2025-11-25 15:24:15,900 | INFO     | sum of deviations: 1370504501450.613
[2025-11-25 16:26:48] 2025-11-25 15:24:15,900 | INFO     | mean x: 1764051609.5009542
[2025-11-25 16:26:48] 2025-11-25 15:24:15,900 | INFO     | mean y: 2311503.8845419846
[2025-11-25 16:26:48] 2025-11-25 15:24:15,900 | INFO     | intersect: -6771449635.153523
[2025-11-25 16:26:48] 2025-11-25 15:24:15,902 | INFO     | chi2: 0.05955338787373999
[2025-11-25 16:26:48] 2025-11-25 15:24:15,902 | INFO     | current memory leak: 3.84 B/s (using 1048 data points, chi2=0.06)
[2025-11-25 16:26:48] 2025-11-25 15:24:15,903 | INFO     | could have reported an average CPU frequency of 2527 MHz (40 samples)
[2025-11-25 16:26:48] 2025-11-25 15:24:15,903 | INFO     | ..............................
[2025-11-25 16:26:48] 2025-11-25 15:24:15,903 | INFO     | . Timing measurements:
[2025-11-25 16:26:48] 2025-11-25 15:24:15,904 | INFO     | . get job = 0 s
[2025-11-25 16:26:48] 2025-11-25 15:24:15,905 | INFO     | . initial setup = 1 s
[2025-11-25 16:26:48] 2025-11-25 15:24:15,905 | INFO     | . payload setup = 7 s
[2025-11-25 16:26:48] 2025-11-25 15:24:15,905 | INFO     | . stage-in = 0 s
[2025-11-25 16:26:48] 2025-11-25 15:24:15,905 | INFO     | . payload execution = 65791 s
[2025-11-25 16:26:48] 2025-11-25 15:24:15,905 | INFO     | . stage-out = 2 s
[2025-11-25 16:26:48] 2025-11-25 15:24:15,905 | INFO     | . log creation = 0 s
[2025-11-25 16:26:48] 2025-11-25 15:24:15,905 | INFO     | ..............................
[2025-11-25 16:26:48] 2025-11-25 15:24:16,004 | INFO     | 
[2025-11-25 16:26:48] 2025-11-25 15:24:16,004 | INFO     | job summary report
[2025-11-25 16:26:48] 2025-11-25 15:24:16,005 | INFO     | --------------------------------------------------
[2025-11-25 16:26:48] 2025-11-25 15:24:16,005 | INFO     | PanDA job id: 6893859511
[2025-11-25 16:26:48] 2025-11-25 15:24:16,005 | INFO     | task id: 47523449
[2025-11-25 16:26:48] 2025-11-25 15:24:16,005 | INFO     | errors: (none)
[2025-11-25 16:26:48] 2025-11-25 15:24:16,005 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 16:26:48] 2025-11-25 15:24:16,005 | INFO     | pilot state: finished 
[2025-11-25 16:26:48] 2025-11-25 15:24:16,005 | INFO     | transexitcode: 0
[2025-11-25 16:26:48] 2025-11-25 15:24:16,005 | INFO     | exeerrorcode: 0
[2025-11-25 16:26:48] 2025-11-25 15:24:16,005 | INFO     | exeerrordiag: 
[2025-11-25 16:26:48] 2025-11-25 15:24:16,005 | INFO     | exitcode: 0
[2025-11-25 16:26:48] 2025-11-25 15:24:16,005 | INFO     | exitmsg: OK
[2025-11-25 16:26:48] 2025-11-25 15:24:16,005 | INFO     | cpuconsumptiontime: 260543 s
[2025-11-25 16:26:48] 2025-11-25 15:24:16,005 | INFO     | nevents: 1000
[2025-11-25 16:26:48] 2025-11-25 15:24:16,006 | INFO     | neventsw: 0
[2025-11-25 16:26:48] 2025-11-25 15:24:16,006 | INFO     | pid: 3124717
[2025-11-25 16:26:48] 2025-11-25 15:24:16,006 | INFO     | pgrp: 3124717
[2025-11-25 16:26:48] 2025-11-25 15:24:16,006 | INFO     | corecount: 4
[2025-11-25 16:26:48] 2025-11-25 15:24:16,006 | INFO     | event service: False
[2025-11-25 16:26:48] 2025-11-25 15:24:16,006 | INFO     | sizes: {0: 2284150, 1: 2284349, 6: 2284611, 11: 2284639, 65802: 2339508, 65805: 2348529, 65807: 2348713, 65813: 2348959}
[2025-11-25 16:26:48] 2025-11-25 15:24:16,006 | INFO     | --------------------------------------------------
[2025-11-25 16:26:48] 2025-11-25 15:24:16,006 | INFO     | 
[2025-11-25 16:26:48] 2025-11-25 15:24:16,006 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/0
[2025-11-25 16:26:48] 2025-11-25 15:24:16,026 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 16:26:48] 2025-11-25 15:24:16,026 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 16:26:48] 2025-11-25 15:24:16,026 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 16:26:48] 2025-11-25 15:24:16,026 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 16:26:48] 2025-11-25 15:24:16,026 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 16:26:48] 2025-11-25 15:24:16,027 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 16:26:48] 2025-11-25 15:24:16,027 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 16:26:48] 2025-11-25 15:24:16,027 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 16:26:48] 2025-11-25 15:24:16,027 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 16:26:48] 2025-11-25 15:24:16,027 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 16:26:48] 2025-11-25 15:24:16,027 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 16:26:48] 2025-11-25 15:24:16,027 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 16:26:48] 2025-11-25 15:24:16,027 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 16:26:48] 2025-11-25 15:24:16,027 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 16:26:48] 2025-11-25 15:24:16,027 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 16:26:48] 2025-11-25 15:24:16,027 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 16:26:48] 2025-11-25 15:24:16,028 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 16:26:48] 2025-11-25 15:24:16,028 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 16:26:48] 2025-11-25 15:24:16,028 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 16:26:48] 2025-11-25 15:24:16,028 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 16:26:48] 2025-11-25 15:24:16,028 | INFO     | job 6893859511 has completed (purged errors)
[2025-11-25 16:26:48] 2025-11-25 15:24:16,028 | INFO     | overall cleanup function is called
[2025-11-25 16:26:48] 2025-11-25 15:24:17,041 | INFO     | --- collectZombieJob: --- 10, [3124717]
[2025-11-25 16:26:48] 2025-11-25 15:24:17,042 | INFO     | zombie collector waiting for pid 3124717
[2025-11-25 16:26:48] 2025-11-25 15:24:17,042 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 16:26:48] 2025-11-25 15:24:17,042 | INFO     | collected zombie processes
[2025-11-25 16:26:48] 2025-11-25 15:24:17,042 | INFO     | will attempt to kill all subprocesses of pid=3124717
[2025-11-25 16:26:48] 2025-11-25 15:24:17,415 | INFO     | process IDs to be killed: [3124717] (in reverse order)
[2025-11-25 16:26:48] 2025-11-25 15:24:17,528 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 16:26:48] 2025-11-25 15:24:17,529 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 16:26:48] 2025-11-25 15:24:17,542 | INFO     | did not find any defunct processes belonging to 3124717
[2025-11-25 16:26:48] 2025-11-25 15:24:17,556 | INFO     | did not find any defunct processes belonging to 3124717
[2025-11-25 16:26:48] 2025-11-25 15:24:17,557 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 16:26:48] 2025-11-25 15:24:17,557 | INFO     | ready for new job
[2025-11-25 16:26:48] 2025-11-25 15:24:17,557 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 16:26:48] 2025-11-25 15:24:17,563 | INFO     | ***************************************
[2025-11-25 16:26:48] 2025-11-25 15:24:17,563 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 16:26:48] 2025-11-25 15:24:17,563 | INFO     | ***************************************
[2025-11-25 16:26:48] 2025-11-25 15:24:17,563 | INFO     | 
[2025-11-25 16:26:48] 2025-11-25 15:24:17,567 | INFO     | architecture information:
[2025-11-25 16:26:48] 2025-11-25 15:24:17,568 | INFO     | executing command: cat /etc/os-release
[2025-11-25 16:26:48] 2025-11-25 15:24:17,584 | INFO     | cat /etc/os-release:
[2025-11-25 16:26:48] NAME="CentOS Linux"
[2025-11-25 16:26:48] VERSION="7 (Core)"
[2025-11-25 16:26:48] ID="centos"
[2025-11-25 16:26:48] ID_LIKE="rhel fedora"
[2025-11-25 16:26:48] VERSION_ID="7"
[2025-11-25 16:26:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 16:26:48] ANSI_COLOR="0;31"
[2025-11-25 16:26:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 16:26:48] HOME_URL="https://www.centos.org/"
[2025-11-25 16:26:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 16:26:48] 
[2025-11-25 16:26:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 16:26:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 16:26:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 16:26:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 16:26:48] 
[2025-11-25 16:26:48] 2025-11-25 15:24:17,584 | INFO     | ***************************************
[2025-11-25 16:26:48] 2025-11-25 15:24:18,087 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/0
[2025-11-25 16:26:48] 2025-11-25 15:24:18,104 | INFO     | sufficient remaining disk space (676828545024 B)
[2025-11-25 16:26:48] 2025-11-25 15:24:18,105 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 16:26:48] 2025-11-25 15:24:18,105 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 16:26:48] 2025-11-25 15:24:18,105 | INFO     | update_server=False
[2025-11-25 16:26:48] 2025-11-25 15:24:18,105 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 16:26:48] 2025-11-25 15:24:18,106 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 16:26:48] 2025-11-25 15:24:18,106 | INFO     | aborting loop
[2025-11-25 16:26:48] 2025-11-25 15:24:18,705 | INFO     | all job control threads have been joined
[2025-11-25 16:26:48] 2025-11-25 15:24:18,845 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 16:26:48] 2025-11-25 15:24:18,863 | INFO     | all data control threads have been joined
[2025-11-25 16:26:48] 2025-11-25 15:24:18,943 | INFO     | all payload control threads have been joined
[2025-11-25 16:26:48] 2025-11-25 15:24:19,111 | INFO     | [job] job monitor thread has finished
[2025-11-25 16:26:48] 2025-11-25 15:24:19,111 | INFO     | [job] retrieve thread has finished
[2025-11-25 16:26:48] 2025-11-25 15:24:19,185 | INFO     | [payload] validate_post thread has finished
[2025-11-25 16:26:48] 2025-11-25 15:24:19,377 | INFO     | [job] validate thread has finished
[2025-11-25 16:26:48] 2025-11-25 15:24:19,591 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 16:26:48] 2025-11-25 15:24:19,615 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 16:26:48] 2025-11-25 15:24:19,711 | INFO     | [job] control thread has finished
[2025-11-25 16:26:48] 2025-11-25 15:24:19,869 | INFO     | [data] control thread has finished
[2025-11-25 16:26:48] 2025-11-25 15:24:19,948 | INFO     | [payload] control thread has finished
[2025-11-25 16:26:48] 2025-11-25 15:24:20,059 | INFO     | [data] copytool_in thread has finished
[2025-11-25 16:26:48] 2025-11-25 15:24:20,159 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 16:26:48] 2025-11-25 15:24:20,181 | INFO     | [payload] failed_post thread has finished
[2025-11-25 16:26:48] 2025-11-25 15:24:20,382 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 16:26:48] 2025-11-25 15:24:20,446 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 16:26:48] 2025-11-25 15:24:20,850 | INFO     | [data] copytool_out thread has finished
[2025-11-25 16:26:48] 2025-11-25 15:24:21,014 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 16:26:48] 2025-11-25 15:24:22,019 | INFO     | [job] queue monitor thread has finished
[2025-11-25 16:26:48] 2025-11-25 15:24:24,165 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 16:26:48] 2025-11-25 15:24:47,874 | INFO     | PID=3117618 has CPU usage=10.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-25 16:26:48] 2025-11-25 15:24:47,875 | INFO     | .. there are 2 such processes running
[2025-11-25 16:26:48] 2025-11-25 15:24:47,876 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 16:26:48] 2025-11-25 15:24:47,876 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 16:26:48] 2025-11-25 15:24:47,876 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 16:26:48] 2025-11-25 15:24:52,974 | INFO     | [monitor] cgroup control has ended
[2025-11-25 16:26:48] 2025-11-25 15:24:54,116 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22473929398080)>', '<ExcThread(monitor, started 22473688966912)>']
[2025-11-25 16:26:48] 2025-11-25 15:24:54,909 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 16:26:48] 2025-11-25 15:24:54,910 | INFO     | [monitor] control thread has ended
[2025-11-25 16:26:48] 2025-11-25 15:24:59,141 | INFO     | all workflow threads have been joined
[2025-11-25 16:26:48] 2025-11-25 15:24:59,142 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 16:26:48] 2025-11-25 15:24:59,142 | INFO     | traces error code: 0
[2025-11-25 16:26:48] 2025-11-25 15:24:59,142 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 16:26:48] 2025-11-25 15:24:59,321 [wrapper] ==== pilot stdout END ====
[2025-11-25 16:26:48] 2025-11-25 15:24:59,324 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 16:26:48] 2025-11-25 15:24:59,327 [wrapper] pilotpid: 3117618
[2025-11-25 16:26:48] 2025-11-25 15:24:59,329 [wrapper] Pilot exit status: 0
[2025-11-25 16:26:48] 2025-11-25 15:24:59,340 [wrapper] pandaids: 6893859511
[2025-11-25 16:26:48] 2025-11-25 15:24:59,432 [wrapper] cleanup supervisor_pilot 3960556 3117619
[2025-11-25 16:26:48] 2025-11-25 15:24:59,435 [wrapper] Test setup, not cleaning
[2025-11-25 16:26:48] 2025-11-25 15:24:59,437 [wrapper] apfmon messages muted
[2025-11-25 16:26:48] 2025-11-25 15:24:59,440 [wrapper] ==== wrapper stdout END ====
[2025-11-25 16:26:48] 2025-11-25 15:24:59,443 [wrapper] ==== wrapper stderr END ====
[2025-11-25 16:26:48]  *** Error codes and diagnostics ***
[2025-11-25 16:26:48]     "exeErrorCode": 0,
[2025-11-25 16:26:48]     "exeErrorDiag": "",
[2025-11-25 16:26:48]     "pilotErrorCode": 0,
[2025-11-25 16:26:48]     "pilotErrorDiag": "",
[2025-11-25 16:26:48]  *** Listing of results directory ***
[2025-11-25 16:26:48] total 1317812
[2025-11-25 16:26:48] -rw-r--r-- 1 boinc boinc    576529 Nov 20 14:12 pilot3.tar.gz
[2025-11-25 16:26:48] -rw-r--r-- 1 boinc boinc      5112 Nov 20 14:29 queuedata.json
[2025-11-25 16:26:48] -rwx------ 1 boinc boinc     36292 Nov 20 14:29 runpilot2-wrapper.sh
[2025-11-25 16:26:48] -rw-r--r-- 1 boinc boinc       100 Nov 24 22:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 16:26:48] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 22:06 run_atlas
[2025-11-25 16:26:48] -rw-r--r-- 1 boinc boinc       105 Nov 24 22:06 job.xml
[2025-11-25 16:26:48] -rw-r--r-- 2 boinc boinc 409961969 Nov 24 22:06 EVNT.47493127._000533.pool.root.1
[2025-11-25 16:26:48] -rw-r--r-- 1 boinc boinc      6636 Nov 24 22:06 init_data.xml
[2025-11-25 16:26:48] -rw-r--r-- 2 boinc boinc    590105 Nov 24 22:06 input.tar.gz
[2025-11-25 16:26:48] -rw-r--r-- 2 boinc boinc     15847 Nov 24 22:06 start_atlas.sh
[2025-11-25 16:26:48] drwxrwx--x 2 boinc boinc      4096 Nov 24 22:06 shared
[2025-11-25 16:26:48] -rw-r--r-- 1 boinc boinc         0 Nov 24 22:06 boinc_lockfile
[2025-11-25 16:26:48] -rw-r--r-- 1 boinc boinc      2786 Nov 24 22:06 pandaJob.out
[2025-11-25 16:26:48] -rw------- 1 boinc boinc    991801 Nov 24 22:07 agis_schedconf.cvmfs.json
[2025-11-25 16:26:48] drwx------ 5 boinc boinc      4096 Nov 24 22:07 pilot3
[2025-11-25 16:26:48] -rw-r--r-- 1 boinc boinc       532 Nov 25 16:14 boinc_task_state.xml
[2025-11-25 16:26:48] -rw------- 1 boinc boinc 913560231 Nov 25 16:23 HITS.47523449._005328.pool.root.1
[2025-11-25 16:26:48] -rw------- 1 boinc boinc      1045 Nov 25 16:24 memory_monitor_summary.json
[2025-11-25 16:26:48] -rw------- 1 boinc boinc   1516240 Nov 25 16:24 agis_ddmendpoints.agis.ALL.json
[2025-11-25 16:26:48] -rw------- 1 boinc boinc   1802988 Nov 25 16:24 log.47523449._005328.job.log.tgz.1
[2025-11-25 16:26:48] -rw------- 1 boinc boinc      8629 Nov 25 16:24 heartbeat.json
[2025-11-25 16:26:48] -rw------- 1 boinc boinc        95 Nov 25 16:24 pilot_heartbeat.json
[2025-11-25 16:26:48] -rw------- 1 boinc boinc      4834 Nov 25 16:24 pilotlog.txt
[2025-11-25 16:26:48] -rw------- 1 boinc boinc   9195036 Nov 25 16:24 log.47523449._005328.job.log.1
[2025-11-25 16:26:48] -rw------- 1 boinc boinc       353 Nov 25 16:24 output.list
[2025-11-25 16:26:48] -rw-r--r-- 1 boinc boinc       620 Nov 25 16:24 runtime_log
[2025-11-25 16:26:48] -rw------- 1 boinc boinc  11018240 Nov 25 16:24 result.tar.gz
[2025-11-25 16:26:48] -rw-r--r-- 1 boinc boinc      9206 Nov 25 16:24 runtime_log.err
[2025-11-25 16:26:48] -rw------- 1 boinc boinc       670 Nov 25 16:24 27lKDmPuJg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmIxHKDmmkaFmn.diag
[2025-11-25 16:26:48] -rw-r--r-- 1 boinc boinc        28 Nov 25 16:26 wrapper_checkpoint.txt
[2025-11-25 16:26:48] -rw-r--r-- 1 boinc boinc      8192 Nov 25 16:26 boinc_mmap_file
[2025-11-25 16:26:48] -rw-r--r-- 1 boinc boinc     21119 Nov 25 16:26 stderr.txt
[2025-11-25 16:26:48] HITS file was successfully produced:
[2025-11-25 16:26:48] -rw------- 1 boinc boinc 913560231 Nov 25 16:23 shared/HITS.pool.root.1
[2025-11-25 16:26:48]  *** Contents of shared directory: ***
[2025-11-25 16:26:48] total 1303872
[2025-11-25 16:26:48] -rw-r--r-- 2 boinc boinc 409961969 Nov 24 22:06 ATLAS.root_0
[2025-11-25 16:26:48] -rw-r--r-- 2 boinc boinc    590105 Nov 24 22:06 input.tar.gz
[2025-11-25 16:26:48] -rw-r--r-- 2 boinc boinc     15847 Nov 24 22:06 start_atlas.sh
[2025-11-25 16:26:48] -rw------- 1 boinc boinc 913560231 Nov 25 16:23 HITS.pool.root.1
[2025-11-25 16:26:48] -rw------- 1 boinc boinc  11018240 Nov 25 16:24 result.tar.gz
16:26:50 (3113450): run_atlas exited; CPU time 263262.646841
16:26:50 (3113450): called boinc_finish(0)

</stderr_txt>
]]>

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