Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:10:39 (746819): wrapper (7.7.26015): starting
22:10:39 (746819): wrapper: running run_atlas (--nthreads 4)
[2025-11-26 22:10:39] Arguments: --nthreads 4
[2025-11-26 22:10:39] Threads: 4
[2025-11-26 22:10:39] Checking for CVMFS
[2025-11-26 22:10:39] No cvmfs_config command found, will try listing directly
[2025-11-26 22:10:39] CVMFS is ok
[2025-11-26 22:10:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 22:10:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 22:10:39] Further information can be found at the LHC@home message board.
[2025-11-26 22:10:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 22:10:39] Checking for apptainer binary...
[2025-11-26 22:10:39] which: no apptainer in ((null))
[2025-11-26 22:10:39] apptainer is not installed, using version from CVMFS
[2025-11-26 22:10:39] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 22:10:39] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot116/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut12.grid.cesnet.cz
[2025-11-26 22:10:39] apptainer works
[2025-11-26 22:10:39] Set ATHENA_PROC_NUMBER=4
[2025-11-26 22:10:39] Set ATHENA_CORE_NUMBER=4
[2025-11-26 22:10:39] Starting ATLAS job with PandaID=6893859980
[2025-11-26 22:10:39] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot116/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 13:06:26]  *** The last 200 lines of the pilot log: ***
[2025-11-27 13:06:26] 2025-11-27 12:05:27,553 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 13:06:26] 2025-11-27 12:05:28,507 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 13:06:26] 2025-11-27 12:05:28,526 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2724.9787500000016
[2025-11-27 13:06:26] 2025-11-27 12:05:28,550 | INFO     | using path: /scratch/boinc/var/slot116/slots/0/PanDA_Pilot-6893859980/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 13:06:26] 2025-11-27 12:05:28,550 | INFO     | extracted standard info from prmon json
[2025-11-27 13:06:26] 2025-11-27 12:05:28,550 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 13:06:26] 2025-11-27 12:05:28,550 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 13:06:26] 2025-11-27 12:05:28,564 | INFO     | fitting pss+swap vs Time
[2025-11-27 13:06:26] 2025-11-27 12:05:28,565 | INFO     | sum of square deviations: 211312836460.0
[2025-11-27 13:06:26] 2025-11-27 12:05:28,582 | INFO     | sum of deviations: 518872590257.0
[2025-11-27 13:06:26] 2025-11-27 12:05:28,582 | INFO     | mean x: 1764218295.5
[2025-11-27 13:06:26] 2025-11-27 12:05:28,582 | INFO     | mean y: 2292350.9977272726
[2025-11-27 13:06:26] 2025-11-27 12:05:28,582 | INFO     | intersect: -4329694915.370513
[2025-11-27 13:06:26] 2025-11-27 12:05:28,583 | INFO     | chi2: 4.267598352034921
[2025-11-27 13:06:26] 2025-11-27 12:05:28,584 | INFO     | sum of square deviations: 207731336750.0
[2025-11-27 13:06:26] 2025-11-27 12:05:28,602 | INFO     | sum of deviations: 715197580317.0
[2025-11-27 13:06:26] 2025-11-27 12:05:28,602 | INFO     | mean x: 1764218143.0
[2025-11-27 13:06:26] 2025-11-27 12:05:28,602 | INFO     | mean y: 2300704.0354285715
[2025-11-27 13:06:26] 2025-11-27 12:05:28,602 | INFO     | intersect: -6071720513.781392
[2025-11-27 13:06:26] 2025-11-27 12:05:28,603 | INFO     | chi2: 1.8675194300770206
[2025-11-27 13:06:26] 2025-11-27 12:05:28,603 | INFO     | current chi2=1.8675194300770206 (change=56.2395690497319 %)
[2025-11-27 13:06:26] 2025-11-27 12:05:28,604 | INFO     | sum of square deviations: 204190535477.5
[2025-11-27 13:06:26] 2025-11-27 12:05:28,620 | INFO     | sum of deviations: 722956038374.0001
[2025-11-27 13:06:26] 2025-11-27 12:05:28,620 | INFO     | mean x: 1764217990.5
[2025-11-27 13:06:26] 2025-11-27 12:05:28,621 | INFO     | mean y: 2301034.901149425
[2025-11-27 13:06:26] 2025-11-27 12:05:28,621 | INFO     | intersect: -6244080788.121999
[2025-11-27 13:06:26] 2025-11-27 12:05:28,622 | INFO     | chi2: 1.812645273844716
[2025-11-27 13:06:26] 2025-11-27 12:05:28,622 | INFO     | current chi2=1.812645273844716 (change=2.9383445948962037 %)
[2025-11-27 13:06:26] 2025-11-27 12:05:28,622 | INFO     | right removable region: 869
[2025-11-27 13:06:26] 2025-11-27 12:05:28,623 | INFO     | sum of square deviations: 207731336750.0
[2025-11-27 13:06:26] 2025-11-27 12:05:28,640 | INFO     | sum of deviations: 370381650618.0001
[2025-11-27 13:06:26] 2025-11-27 12:05:28,640 | INFO     | mean x: 1764218448.0
[2025-11-27 13:06:26] 2025-11-27 12:05:28,640 | INFO     | mean y: 2298659.4171428573
[2025-11-27 13:06:26] 2025-11-27 12:05:28,640 | INFO     | intersect: -3143274613.4654155
[2025-11-27 13:06:26] 2025-11-27 12:05:28,641 | INFO     | chi2: 2.5259856890129955
[2025-11-27 13:06:26] 2025-11-27 12:05:28,641 | INFO     | current chi2=2.5259856890129955 (change=40.81013533505259 %)
[2025-11-27 13:06:26] 2025-11-27 12:05:28,642 | INFO     | sum of square deviations: 204190535477.5
[2025-11-27 13:06:26] 2025-11-27 12:05:28,659 | INFO     | sum of deviations: 345653472539.49994
[2025-11-27 13:06:26] 2025-11-27 12:05:28,659 | INFO     | mean x: 1764218600.5
[2025-11-27 13:06:26] 2025-11-27 12:05:28,659 | INFO     | mean y: 2299723.78045977
[2025-11-27 13:06:26] 2025-11-27 12:05:28,659 | INFO     | intersect: -2984167225.608569
[2025-11-27 13:06:26] 2025-11-27 12:05:28,660 | INFO     | chi2: 2.5089402936120453
[2025-11-27 13:06:26] 2025-11-27 12:05:28,660 | INFO     | current chi2=2.5089402936120453 (change=0.6748017407656219 %)
[2025-11-27 13:06:26] 2025-11-27 12:05:28,660 | INFO     | left removable region: 20
[2025-11-27 13:06:26] 2025-11-27 12:05:28,661 | INFO     | sum of square deviations: 189758348600.0
[2025-11-27 13:06:26] 2025-11-27 12:05:28,677 | INFO     | sum of deviations: 515770912887.0
[2025-11-27 13:06:26] 2025-11-27 12:05:28,677 | INFO     | mean x: 1764218570.0
[2025-11-27 13:06:26] 2025-11-27 12:05:28,677 | INFO     | mean y: 2309879.808009423
[2025-11-27 13:06:26] 2025-11-27 12:05:28,677 | INFO     | intersect: -4792907980.66771
[2025-11-27 13:06:26] 2025-11-27 12:05:28,678 | INFO     | chi2: 0.035394175434582266
[2025-11-27 13:06:26] 2025-11-27 12:05:28,678 | INFO     | current memory leak: 2.72 B/s (using 849 data points, chi2=0.04)
[2025-11-27 13:06:26] 2025-11-27 12:05:28,679 | INFO     | could have reported an average CPU frequency of 2704 MHz (33 samples)
[2025-11-27 13:06:26] 2025-11-27 12:05:28,679 | INFO     | ..............................
[2025-11-27 13:06:26] 2025-11-27 12:05:28,679 | INFO     | . Timing measurements:
[2025-11-27 13:06:26] 2025-11-27 12:05:28,679 | INFO     | . get job = 0 s
[2025-11-27 13:06:26] 2025-11-27 12:05:28,680 | INFO     | . initial setup = 1 s
[2025-11-27 13:06:26] 2025-11-27 12:05:28,680 | INFO     | . payload setup = 8 s
[2025-11-27 13:06:26] 2025-11-27 12:05:28,680 | INFO     | . stage-in = 0 s
[2025-11-27 13:06:26] 2025-11-27 12:05:28,680 | INFO     | . payload execution = 53631 s
[2025-11-27 13:06:26] 2025-11-27 12:05:28,680 | INFO     | . stage-out = 2 s
[2025-11-27 13:06:26] 2025-11-27 12:05:28,680 | INFO     | . log creation = 0 s
[2025-11-27 13:06:26] 2025-11-27 12:05:28,680 | INFO     | ..............................
[2025-11-27 13:06:26] 2025-11-27 12:05:28,769 | INFO     | 
[2025-11-27 13:06:26] 2025-11-27 12:05:28,769 | INFO     | job summary report
[2025-11-27 13:06:26] 2025-11-27 12:05:28,769 | INFO     | --------------------------------------------------
[2025-11-27 13:06:26] 2025-11-27 12:05:28,769 | INFO     | PanDA job id: 6893859980
[2025-11-27 13:06:26] 2025-11-27 12:05:28,769 | INFO     | task id: 47523449
[2025-11-27 13:06:26] 2025-11-27 12:05:28,769 | INFO     | errors: (none)
[2025-11-27 13:06:26] 2025-11-27 12:05:28,769 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 13:06:26] 2025-11-27 12:05:28,770 | INFO     | pilot state: finished 
[2025-11-27 13:06:26] 2025-11-27 12:05:28,770 | INFO     | transexitcode: 0
[2025-11-27 13:06:26] 2025-11-27 12:05:28,770 | INFO     | exeerrorcode: 0
[2025-11-27 13:06:26] 2025-11-27 12:05:28,770 | INFO     | exeerrordiag: 
[2025-11-27 13:06:26] 2025-11-27 12:05:28,770 | INFO     | exitcode: 0
[2025-11-27 13:06:26] 2025-11-27 12:05:28,770 | INFO     | exitmsg: OK
[2025-11-27 13:06:26] 2025-11-27 12:05:28,770 | INFO     | cpuconsumptiontime: 212530 s
[2025-11-27 13:06:26] 2025-11-27 12:05:28,770 | INFO     | nevents: 1000
[2025-11-27 13:06:26] 2025-11-27 12:05:28,770 | INFO     | neventsw: 0
[2025-11-27 13:06:26] 2025-11-27 12:05:28,770 | INFO     | pid: 758937
[2025-11-27 13:06:26] 2025-11-27 12:05:28,770 | INFO     | pgrp: 758937
[2025-11-27 13:06:26] 2025-11-27 12:05:28,770 | INFO     | corecount: 4
[2025-11-27 13:06:26] 2025-11-27 12:05:28,770 | INFO     | event service: False
[2025-11-27 13:06:26] 2025-11-27 12:05:28,771 | INFO     | sizes: {0: 2284155, 1: 2284354, 7: 2284616, 11: 2284644, 53643: 2335500, 53644: 2335499, 53646: 2344701, 53649: 2344757, 53658: 2345067}
[2025-11-27 13:06:26] 2025-11-27 12:05:28,771 | INFO     | --------------------------------------------------
[2025-11-27 13:06:26] 2025-11-27 12:05:28,771 | INFO     | 
[2025-11-27 13:06:26] 2025-11-27 12:05:28,771 | INFO     | executing command: ls -lF /scratch/boinc/var/slot116/slots/0
[2025-11-27 13:06:26] 2025-11-27 12:05:28,780 | INFO     | time since job start (53676s) is within the limit (172800.0s)
[2025-11-27 13:06:26] 2025-11-27 12:05:28,804 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 13:06:26] 2025-11-27 12:05:28,804 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 13:06:26] 2025-11-27 12:05:28,804 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 13:06:26] 2025-11-27 12:05:28,804 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 13:06:26] 2025-11-27 12:05:28,804 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 13:06:26] 2025-11-27 12:05:28,804 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 13:06:26] 2025-11-27 12:05:28,805 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 13:06:26] 2025-11-27 12:05:28,805 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 13:06:26] 2025-11-27 12:05:28,805 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 13:06:26] 2025-11-27 12:05:28,805 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 13:06:26] 2025-11-27 12:05:28,805 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 13:06:26] 2025-11-27 12:05:28,805 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 13:06:26] 2025-11-27 12:05:28,805 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 13:06:26] 2025-11-27 12:05:28,805 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 13:06:26] 2025-11-27 12:05:28,805 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 13:06:26] 2025-11-27 12:05:28,805 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 13:06:26] 2025-11-27 12:05:28,805 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 13:06:26] 2025-11-27 12:05:28,806 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 13:06:26] 2025-11-27 12:05:28,806 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 13:06:26] 2025-11-27 12:05:28,806 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 13:06:26] 2025-11-27 12:05:28,806 | INFO     | job 6893859980 has completed (purged errors)
[2025-11-27 13:06:26] 2025-11-27 12:05:28,806 | INFO     | overall cleanup function is called
[2025-11-27 13:06:26] 2025-11-27 12:05:29,823 | INFO     | --- collectZombieJob: --- 10, [758937]
[2025-11-27 13:06:26] 2025-11-27 12:05:29,823 | INFO     | zombie collector waiting for pid 758937
[2025-11-27 13:06:26] 2025-11-27 12:05:29,823 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 13:06:26] 2025-11-27 12:05:29,823 | INFO     | collected zombie processes
[2025-11-27 13:06:26] 2025-11-27 12:05:29,823 | INFO     | will attempt to kill all subprocesses of pid=758937
[2025-11-27 13:06:26] 2025-11-27 12:05:30,636 | INFO     | process IDs to be killed: [758937] (in reverse order)
[2025-11-27 13:06:26] 2025-11-27 12:05:30,901 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 13:06:26] 2025-11-27 12:05:30,901 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 13:06:26] 2025-11-27 12:05:30,933 | INFO     | did not find any defunct processes belonging to 758937
[2025-11-27 13:06:26] 2025-11-27 12:05:30,963 | INFO     | did not find any defunct processes belonging to 758937
[2025-11-27 13:06:26] 2025-11-27 12:05:30,965 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 13:06:26] 2025-11-27 12:05:30,965 | INFO     | ready for new job
[2025-11-27 13:06:26] 2025-11-27 12:05:30,965 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 13:06:26] 2025-11-27 12:05:30,971 | INFO     | ***************************************
[2025-11-27 13:06:26] 2025-11-27 12:05:30,972 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 13:06:26] 2025-11-27 12:05:30,972 | INFO     | ***************************************
[2025-11-27 13:06:26] 2025-11-27 12:05:30,972 | INFO     | 
[2025-11-27 13:06:26] 2025-11-27 12:05:30,980 | INFO     | architecture information:
[2025-11-27 13:06:26] 2025-11-27 12:05:30,980 | INFO     | executing command: cat /etc/os-release
[2025-11-27 13:06:26] 2025-11-27 12:05:31,004 | INFO     | cat /etc/os-release:
[2025-11-27 13:06:26] NAME="CentOS Linux"
[2025-11-27 13:06:26] VERSION="7 (Core)"
[2025-11-27 13:06:26] ID="centos"
[2025-11-27 13:06:26] ID_LIKE="rhel fedora"
[2025-11-27 13:06:26] VERSION_ID="7"
[2025-11-27 13:06:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 13:06:26] ANSI_COLOR="0;31"
[2025-11-27 13:06:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 13:06:26] HOME_URL="https://www.centos.org/"
[2025-11-27 13:06:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 13:06:26] 
[2025-11-27 13:06:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 13:06:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 13:06:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 13:06:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 13:06:26] 
[2025-11-27 13:06:26] 2025-11-27 12:05:31,005 | INFO     | ***************************************
[2025-11-27 13:06:26] 2025-11-27 12:05:31,507 | INFO     | executing command: df -mP /scratch/boinc/var/slot116/slots/0
[2025-11-27 13:06:26] 2025-11-27 12:05:31,532 | INFO     | sufficient remaining disk space (3278516518912 B)
[2025-11-27 13:06:26] 2025-11-27 12:05:31,532 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 13:06:26] 2025-11-27 12:05:31,532 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 13:06:26] 2025-11-27 12:05:31,532 | INFO     | update_server=False
[2025-11-27 13:06:26] 2025-11-27 12:05:31,533 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 13:06:26] 2025-11-27 12:05:31,533 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 13:06:26] 2025-11-27 12:05:31,533 | INFO     | aborting loop
[2025-11-27 13:06:26] 2025-11-27 12:05:31,557 | INFO     | all payload control threads have been joined
[2025-11-27 13:06:26] 2025-11-27 12:05:32,256 | INFO     | all data control threads have been joined
[2025-11-27 13:06:26] 2025-11-27 12:05:32,416 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 13:06:26] 2025-11-27 12:05:32,538 | INFO     | [job] job monitor thread has finished
[2025-11-27 13:06:26] 2025-11-27 12:05:32,539 | INFO     | [job] retrieve thread has finished
[2025-11-27 13:06:26] 2025-11-27 12:05:32,563 | INFO     | [payload] control thread has finished
[2025-11-27 13:06:26] 2025-11-27 12:05:32,620 | INFO     | [payload] failed_post thread has finished
[2025-11-27 13:06:26] 2025-11-27 12:05:32,762 | INFO     | all job control threads have been joined
[2025-11-27 13:06:26] 2025-11-27 12:05:32,834 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 13:06:26] 2025-11-27 12:05:32,975 | INFO     | [payload] validate_post thread has finished
[2025-11-27 13:06:26] 2025-11-27 12:05:33,108 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 13:06:26] 2025-11-27 12:05:33,261 | INFO     | [data] control thread has finished
[2025-11-27 13:06:26] 2025-11-27 12:05:33,337 | INFO     | [data] copytool_in thread has finished
[2025-11-27 13:06:26] 2025-11-27 12:05:33,337 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 13:06:26] 2025-11-27 12:05:33,767 | INFO     | [job] control thread has finished
[2025-11-27 13:06:26] 2025-11-27 12:05:33,780 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 13:06:26] 2025-11-27 12:05:33,792 | INFO     | [job] validate thread has finished
[2025-11-27 13:06:26] 2025-11-27 12:05:34,348 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 13:06:26] 2025-11-27 12:05:34,421 | INFO     | [data] copytool_out thread has finished
[2025-11-27 13:06:26] 2025-11-27 12:05:34,785 | INFO     | [job] queue monitor thread has finished
[2025-11-27 13:06:26] 2025-11-27 12:05:38,354 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 13:06:26] 2025-11-27 12:05:41,974 | INFO     | job.realtimelogging is not enabled
[2025-11-27 13:06:26] 2025-11-27 12:05:42,979 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 13:06:26] 2025-11-27 12:06:02,520 | INFO     | PID=750940 has CPU usage=5.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-27 13:06:26] 2025-11-27 12:06:02,520 | INFO     | .. there are 5 such processes running
[2025-11-27 13:06:26] 2025-11-27 12:06:02,520 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 13:06:26] 2025-11-27 12:06:02,520 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 13:06:26] 2025-11-27 12:06:02,520 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 13:06:26] 2025-11-27 12:06:16,322 | INFO     | [monitor] cgroup control has ended
[2025-11-27 13:06:26] 2025-11-27 12:06:17,719 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22546450736960)>', '<ExcThread(monitor, started 22546212685568)>']
[2025-11-27 13:06:26] 2025-11-27 12:06:18,599 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 13:06:26] 2025-11-27 12:06:18,599 | INFO     | [monitor] control thread has ended
[2025-11-27 13:06:26] 2025-11-27 12:06:22,740 | INFO     | all workflow threads have been joined
[2025-11-27 13:06:26] 2025-11-27 12:06:22,740 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 13:06:26] 2025-11-27 12:06:22,740 | INFO     | traces error code: 0
[2025-11-27 13:06:26] 2025-11-27 12:06:22,740 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 13:06:26] 2025-11-27 12:06:22,896 [wrapper] ==== pilot stdout END ====
[2025-11-27 13:06:26] 2025-11-27 12:06:22,899 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 13:06:26] 2025-11-27 12:06:22,902 [wrapper] pilotpid: 750940
[2025-11-27 13:06:26] 2025-11-27 12:06:22,905 [wrapper] Pilot exit status: 0
[2025-11-27 13:06:26] 2025-11-27 12:06:22,918 [wrapper] pandaids: 6893859980
[2025-11-27 13:06:26] 2025-11-27 12:06:23,087 [wrapper] cleanup supervisor_pilot 1929911 750941
[2025-11-27 13:06:26] 2025-11-27 12:06:23,091 [wrapper] Test setup, not cleaning
[2025-11-27 13:06:26] 2025-11-27 12:06:23,095 [wrapper] apfmon messages muted
[2025-11-27 13:06:26] 2025-11-27 12:06:23,099 [wrapper] ==== wrapper stdout END ====
[2025-11-27 13:06:26] 2025-11-27 12:06:23,102 [wrapper] ==== wrapper stderr END ====
[2025-11-27 13:06:26]  *** Error codes and diagnostics ***
[2025-11-27 13:06:26]     "exeErrorCode": 0,
[2025-11-27 13:06:26]     "exeErrorDiag": "",
[2025-11-27 13:06:26]     "pilotErrorCode": 0,
[2025-11-27 13:06:26]     "pilotErrorDiag": "",
[2025-11-27 13:06:26]  *** Listing of results directory ***
[2025-11-27 13:06:26] total 1315256
[2025-11-27 13:06:26] -rw-r--r-- 1 boinc boinc    576529 Nov 20 14:12 pilot3.tar.gz
[2025-11-27 13:06:26] -rw-r--r-- 1 boinc boinc      5112 Nov 20 14:29 queuedata.json
[2025-11-27 13:06:26] -rwx------ 1 boinc boinc     36292 Nov 20 14:29 runpilot2-wrapper.sh
[2025-11-27 13:06:26] -rw-r--r-- 1 boinc boinc       100 Nov 26 22:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 13:06:26] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 22:10 run_atlas
[2025-11-27 13:06:26] -rw-r--r-- 1 boinc boinc       105 Nov 26 22:10 job.xml
[2025-11-27 13:06:26] -rw-r--r-- 1 boinc boinc      6688 Nov 26 22:10 init_data.xml
[2025-11-27 13:06:26] -rw-r--r-- 2 boinc boinc 409073866 Nov 26 22:10 EVNT.47493127._000536.pool.root.1
[2025-11-27 13:06:26] -rw-r--r-- 2 boinc boinc     15847 Nov 26 22:10 start_atlas.sh
[2025-11-27 13:06:26] drwxrwx--x 2 boinc boinc      4096 Nov 26 22:10 shared
[2025-11-27 13:06:26] -rw-r--r-- 2 boinc boinc    590100 Nov 26 22:10 input.tar.gz
[2025-11-27 13:06:26] -rw-r--r-- 1 boinc boinc         0 Nov 26 22:10 boinc_lockfile
[2025-11-27 13:06:26] -rw-r--r-- 1 boinc boinc      2785 Nov 26 22:10 pandaJob.out
[2025-11-27 13:06:26] -rw------- 1 boinc boinc    991538 Nov 26 22:10 agis_schedconf.cvmfs.json
[2025-11-27 13:06:26] drwx------ 5 boinc boinc      4096 Nov 26 22:10 pilot3
[2025-11-27 13:06:26] -rw-r--r-- 1 boinc boinc       531 Nov 27 12:58 boinc_task_state.xml
[2025-11-27 13:06:26] -rw------- 1 boinc boinc 915706527 Nov 27 13:04 HITS.47523449._005355.pool.root.1
[2025-11-27 13:06:26] -rw------- 1 boinc boinc      1044 Nov 27 13:05 memory_monitor_summary.json
[2025-11-27 13:06:26] -rw------- 1 boinc boinc   1516240 Nov 27 13:05 agis_ddmendpoints.agis.ALL.json
[2025-11-27 13:06:26] -rw------- 1 boinc boinc   1634554 Nov 27 13:05 log.47523449._005355.job.log.tgz.1
[2025-11-27 13:06:26] -rw------- 1 boinc boinc      7918 Nov 27 13:05 heartbeat.json
[2025-11-27 13:06:26] -rw------- 1 boinc boinc        95 Nov 27 13:05 pilot_heartbeat.json
[2025-11-27 13:06:26] -rw-r--r-- 1 boinc boinc        28 Nov 27 13:06 wrapper_checkpoint.txt
[2025-11-27 13:06:26] -rw------- 1 boinc boinc      4906 Nov 27 13:06 pilotlog.txt
[2025-11-27 13:06:26] -rw------- 1 boinc boinc   7425610 Nov 27 13:06 log.47523449._005355.job.log.1
[2025-11-27 13:06:26] -rw------- 1 boinc boinc       353 Nov 27 13:06 output.list
[2025-11-27 13:06:26] -rw-r--r-- 1 boinc boinc       620 Nov 27 13:06 runtime_log
[2025-11-27 13:06:26] -rw------- 1 boinc boinc   9082880 Nov 27 13:06 result.tar.gz
[2025-11-27 13:06:26] -rw------- 1 boinc boinc       670 Nov 27 13:06 yNtKDmPuJg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmMxHKDmXiXTPm.diag
[2025-11-27 13:06:26] -rw-r--r-- 1 boinc boinc      9223 Nov 27 13:06 runtime_log.err
[2025-11-27 13:06:26] -rw-r--r-- 1 boinc boinc      8192 Nov 27 13:06 boinc_mmap_file
[2025-11-27 13:06:26] -rw-r--r-- 1 boinc boinc     21042 Nov 27 13:06 stderr.txt
[2025-11-27 13:06:26] HITS file was successfully produced:
[2025-11-27 13:06:26] -rw------- 1 boinc boinc 915706527 Nov 27 13:04 shared/HITS.pool.root.1
[2025-11-27 13:06:26]  *** Contents of shared directory: ***
[2025-11-27 13:06:26] total 1303212
[2025-11-27 13:06:26] -rw-r--r-- 2 boinc boinc 409073866 Nov 26 22:10 ATLAS.root_0
[2025-11-27 13:06:26] -rw-r--r-- 2 boinc boinc     15847 Nov 26 22:10 start_atlas.sh
[2025-11-27 13:06:26] -rw-r--r-- 2 boinc boinc    590100 Nov 26 22:10 input.tar.gz
[2025-11-27 13:06:26] -rw------- 1 boinc boinc 915706527 Nov 27 13:04 HITS.pool.root.1
[2025-11-27 13:06:26] -rw------- 1 boinc boinc   9082880 Nov 27 13:06 result.tar.gz
13:06:27 (746819): run_atlas exited; CPU time 215254.732917
13:06:27 (746819): called boinc_finish(0)

</stderr_txt>
]]>

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