Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:23:53 (4068545): wrapper (7.7.26015): starting
19:23:53 (4068545): wrapper: running run_atlas (--nthreads 4)
[2025-11-25 19:23:53] Arguments: --nthreads 4
[2025-11-25 19:23:53] Threads: 4
[2025-11-25 19:23:53] Checking for CVMFS
[2025-11-25 19:23:53] No cvmfs_config command found, will try listing directly
[2025-11-25 19:23:53] CVMFS is ok
[2025-11-25 19:23:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 19:23:53] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 19:23:53] Further information can be found at the LHC@home message board.
[2025-11-25 19:23:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 19:23:53] Checking for apptainer binary...
[2025-11-25 19:23:53] which: no apptainer in ((null))
[2025-11-25 19:23:53] apptainer is not installed, using version from CVMFS
[2025-11-25 19:23:53] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 19:23:53] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut03.grid.cesnet.cz
[2025-11-25 19:23:53] apptainer works
[2025-11-25 19:23:53] Set ATHENA_PROC_NUMBER=4
[2025-11-25 19:23:53] Set ATHENA_CORE_NUMBER=4
[2025-11-25 19:23:53] Starting ATLAS job with PandaID=6893874645
[2025-11-25 19:23:53] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 14:02:44]  *** The last 200 lines of the pilot log: ***
[2025-11-26 14:02:44] 2025-11-26 12:59:32,844 | INFO     | time since job start (66926s) is within the limit (172800.0s)
[2025-11-26 14:02:44] 2025-11-26 12:59:34,530 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 14:02:44] 2025-11-26 12:59:34,540 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2769.7066875
[2025-11-26 14:02:44] 2025-11-26 12:59:34,551 | INFO     | using path: /scratch/boinc/var/slot56/slots/0/PanDA_Pilot-6893874645/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 14:02:44] 2025-11-26 12:59:34,552 | INFO     | extracted standard info from prmon json
[2025-11-26 14:02:44] 2025-11-26 12:59:34,552 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 14:02:44] 2025-11-26 12:59:34,552 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 14:02:44] 2025-11-26 12:59:34,570 | INFO     | fitting pss+swap vs Time
[2025-11-26 14:02:44] 2025-11-26 12:59:34,572 | INFO     | sum of square deviations: 409352203082.9704
[2025-11-26 14:02:44] 2025-11-26 12:59:34,595 | INFO     | sum of deviations: 1101899846699.0422
[2025-11-26 14:02:44] 2025-11-26 12:59:34,595 | INFO     | mean x: 1764128503.1002734
[2025-11-26 14:02:44] 2025-11-26 12:59:34,595 | INFO     | mean y: 2290492.517775752
[2025-11-26 14:02:44] 2025-11-26 12:59:34,595 | INFO     | intersect: -4746414687.235709
[2025-11-26 14:02:44] 2025-11-26 12:59:34,597 | INFO     | chi2: 4.261382615037814
[2025-11-26 14:02:44] 2025-11-26 12:59:34,598 | INFO     | sum of square deviations: 403780355417.9194
[2025-11-26 14:02:44] 2025-11-26 12:59:34,621 | INFO     | sum of deviations: 1345850000478.06
[2025-11-26 14:02:44] 2025-11-26 12:59:34,621 | INFO     | mean x: 1764128350.6007326
[2025-11-26 14:02:44] 2025-11-26 12:59:34,622 | INFO     | mean y: 2297165.176739927
[2025-11-26 14:02:44] 2025-11-26 12:59:34,622 | INFO     | intersect: -5877761410.337576
[2025-11-26 14:02:44] 2025-11-26 12:59:34,623 | INFO     | chi2: 1.8624654228513453
[2025-11-26 14:02:44] 2025-11-26 12:59:34,623 | INFO     | current chi2=1.8624654228513453 (change=56.29433939400397 %)
[2025-11-26 14:02:44] 2025-11-26 12:59:34,624 | INFO     | sum of square deviations: 398259299402.8686
[2025-11-26 14:02:44] 2025-11-26 12:59:34,647 | INFO     | sum of deviations: 1325803775435.9734
[2025-11-26 14:02:44] 2025-11-26 12:59:34,647 | INFO     | mean x: 1764128198.101196
[2025-11-26 14:02:44] 2025-11-26 12:59:34,648 | INFO     | mean y: 2296611.4820607174
[2025-11-26 14:02:44] 2025-11-26 12:59:34,648 | INFO     | intersect: -5870479815.590568
[2025-11-26 14:02:44] 2025-11-26 12:59:34,649 | INFO     | chi2: 1.8622655608239158
[2025-11-26 14:02:44] 2025-11-26 12:59:34,649 | INFO     | current chi2=1.8622655608239158 (change=0.01073104633123975 %)
[2025-11-26 14:02:44] 2025-11-26 12:59:34,649 | INFO     | right removable region: 1086
[2025-11-26 14:02:44] 2025-11-26 12:59:34,651 | INFO     | sum of square deviations: 403780288317.9193
[2025-11-26 14:02:44] 2025-11-26 12:59:34,673 | INFO     | sum of deviations: 904176040376.9568
[2025-11-26 14:02:44] 2025-11-26 12:59:34,674 | INFO     | mean x: 1764128655.6007326
[2025-11-26 14:02:44] 2025-11-26 12:59:34,674 | INFO     | mean y: 2295895.804945055
[2025-11-26 14:02:44] 2025-11-26 12:59:34,674 | INFO     | intersect: -3948077385.618576
[2025-11-26 14:02:44] 2025-11-26 12:59:34,675 | INFO     | chi2: 2.5011404171700304
[2025-11-26 14:02:44] 2025-11-26 12:59:34,675 | INFO     | current chi2=2.5011404171700304 (change=41.30683294328321 %)
[2025-11-26 14:02:44] 2025-11-26 12:59:34,677 | INFO     | sum of square deviations: 398259165202.86865
[2025-11-26 14:02:44] 2025-11-26 12:59:34,699 | INFO     | sum of deviations: 885395280512.3789
[2025-11-26 14:02:44] 2025-11-26 12:59:34,700 | INFO     | mean x: 1764128808.101196
[2025-11-26 14:02:44] 2025-11-26 12:59:34,700 | INFO     | mean y: 2296414.169273229
[2025-11-26 14:02:44] 2025-11-26 12:59:34,700 | INFO     | intersect: -3919650542.438962
[2025-11-26 14:02:44] 2025-11-26 12:59:34,701 | INFO     | chi2: 2.4993199574398774
[2025-11-26 14:02:44] 2025-11-26 12:59:34,701 | INFO     | current chi2=2.4993199574398774 (change=0.07278518701532115 %)
[2025-11-26 14:02:44] 2025-11-26 12:59:34,701 | INFO     | left removable region: 20
[2025-11-26 14:02:44] 2025-11-26 12:59:34,703 | INFO     | sum of square deviations: 375620187955.7593
[2025-11-26 14:02:44] 2025-11-26 12:59:34,724 | INFO     | sum of deviations: 1071849744651.3716
[2025-11-26 14:02:44] 2025-11-26 12:59:34,725 | INFO     | mean x: 1764128777.6003752
[2025-11-26 14:02:44] 2025-11-26 12:59:34,725 | INFO     | mean y: 2303495.571294559
[2025-11-26 14:02:44] 2025-11-26 12:59:34,725 | INFO     | intersect: -5031720341.363175
[2025-11-26 14:02:44] 2025-11-26 12:59:34,726 | INFO     | chi2: 0.08696400285538963
[2025-11-26 14:02:44] 2025-11-26 12:59:34,726 | INFO     | current memory leak: 2.85 B/s (using 1066 data points, chi2=0.09)
[2025-11-26 14:02:44] 2025-11-26 12:59:34,728 | INFO     | could have reported an average CPU frequency of 2658 MHz (40 samples)
[2025-11-26 14:02:44] 2025-11-26 12:59:34,728 | INFO     | ..............................
[2025-11-26 14:02:44] 2025-11-26 12:59:34,728 | INFO     | . Timing measurements:
[2025-11-26 14:02:44] 2025-11-26 12:59:34,728 | INFO     | . get job = 0 s
[2025-11-26 14:02:44] 2025-11-26 12:59:34,728 | INFO     | . initial setup = 1 s
[2025-11-26 14:02:44] 2025-11-26 12:59:34,728 | INFO     | . payload setup = 6 s
[2025-11-26 14:02:44] 2025-11-26 12:59:34,728 | INFO     | . stage-in = 0 s
[2025-11-26 14:02:44] 2025-11-26 12:59:34,728 | INFO     | . payload execution = 66891 s
[2025-11-26 14:02:44] 2025-11-26 12:59:34,728 | INFO     | . stage-out = 2 s
[2025-11-26 14:02:44] 2025-11-26 12:59:34,728 | INFO     | . log creation = 0 s
[2025-11-26 14:02:44] 2025-11-26 12:59:34,728 | INFO     | ..............................
[2025-11-26 14:02:44] 2025-11-26 12:59:34,849 | INFO     | time since job start (66928s) is within the limit (172800.0s)
[2025-11-26 14:02:44] 2025-11-26 12:59:35,159 | INFO     | 
[2025-11-26 14:02:44] 2025-11-26 12:59:35,160 | INFO     | job summary report
[2025-11-26 14:02:44] 2025-11-26 12:59:35,160 | INFO     | --------------------------------------------------
[2025-11-26 14:02:44] 2025-11-26 12:59:35,160 | INFO     | PanDA job id: 6893874645
[2025-11-26 14:02:44] 2025-11-26 12:59:35,160 | INFO     | task id: 47523449
[2025-11-26 14:02:44] 2025-11-26 12:59:35,160 | INFO     | errors: (none)
[2025-11-26 14:02:44] 2025-11-26 12:59:35,160 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 14:02:44] 2025-11-26 12:59:35,160 | INFO     | pilot state: finished 
[2025-11-26 14:02:44] 2025-11-26 12:59:35,160 | INFO     | transexitcode: 0
[2025-11-26 14:02:44] 2025-11-26 12:59:35,160 | INFO     | exeerrorcode: 0
[2025-11-26 14:02:44] 2025-11-26 12:59:35,160 | INFO     | exeerrordiag: 
[2025-11-26 14:02:44] 2025-11-26 12:59:35,160 | INFO     | exitcode: 0
[2025-11-26 14:02:44] 2025-11-26 12:59:35,160 | INFO     | exitmsg: OK
[2025-11-26 14:02:44] 2025-11-26 12:59:35,160 | INFO     | cpuconsumptiontime: 260402 s
[2025-11-26 14:02:44] 2025-11-26 12:59:35,161 | INFO     | nevents: 1000
[2025-11-26 14:02:44] 2025-11-26 12:59:35,161 | INFO     | neventsw: 0
[2025-11-26 14:02:44] 2025-11-26 12:59:35,161 | INFO     | pid: 4079765
[2025-11-26 14:02:44] 2025-11-26 12:59:35,161 | INFO     | pgrp: 4079765
[2025-11-26 14:02:44] 2025-11-26 12:59:35,161 | INFO     | corecount: 4
[2025-11-26 14:02:44] 2025-11-26 12:59:35,161 | INFO     | event service: False
[2025-11-26 14:02:44] 2025-11-26 12:59:35,161 | INFO     | sizes: {0: 2284153, 1: 2284352, 5: 2284614, 11: 2284670, 66901: 2340716, 66902: 2340715, 66905: 2349915, 66907: 2349971, 66912: 2350217}
[2025-11-26 14:02:44] 2025-11-26 12:59:35,161 | INFO     | --------------------------------------------------
[2025-11-26 14:02:44] 2025-11-26 12:59:35,161 | INFO     | 
[2025-11-26 14:02:44] 2025-11-26 12:59:35,161 | INFO     | executing command: ls -lF /scratch/boinc/var/slot56/slots/0
[2025-11-26 14:02:44] 2025-11-26 12:59:35,180 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 14:02:44] 2025-11-26 12:59:35,181 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 14:02:44] 2025-11-26 12:59:35,181 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 14:02:44] 2025-11-26 12:59:35,181 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 14:02:44] 2025-11-26 12:59:35,181 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 14:02:44] 2025-11-26 12:59:35,181 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 14:02:44] 2025-11-26 12:59:35,181 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 14:02:44] 2025-11-26 12:59:35,181 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 14:02:44] 2025-11-26 12:59:35,181 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 14:02:44] 2025-11-26 12:59:35,181 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 14:02:44] 2025-11-26 12:59:35,181 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 14:02:44] 2025-11-26 12:59:35,182 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 14:02:44] 2025-11-26 12:59:35,182 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 14:02:44] 2025-11-26 12:59:35,182 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 14:02:44] 2025-11-26 12:59:35,182 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 14:02:44] 2025-11-26 12:59:35,182 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 14:02:44] 2025-11-26 12:59:35,182 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 14:02:44] 2025-11-26 12:59:35,182 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 14:02:44] 2025-11-26 12:59:35,182 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 14:02:44] 2025-11-26 12:59:35,182 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 14:02:44] 2025-11-26 12:59:35,182 | INFO     | job 6893874645 has completed (purged errors)
[2025-11-26 14:02:44] 2025-11-26 12:59:35,183 | INFO     | overall cleanup function is called
[2025-11-26 14:02:44] 2025-11-26 12:59:36,196 | INFO     | --- collectZombieJob: --- 10, [4079765]
[2025-11-26 14:02:44] 2025-11-26 12:59:36,196 | INFO     | zombie collector waiting for pid 4079765
[2025-11-26 14:02:44] 2025-11-26 12:59:36,196 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 14:02:44] 2025-11-26 12:59:36,196 | INFO     | collected zombie processes
[2025-11-26 14:02:44] 2025-11-26 12:59:36,196 | INFO     | will attempt to kill all subprocesses of pid=4079765
[2025-11-26 14:02:44] 2025-11-26 12:59:36,512 | INFO     | PID=4072801 has CPU usage=21.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-26 14:02:44] 2025-11-26 12:59:36,512 | INFO     | .. there are 3 such processes running
[2025-11-26 14:02:44] 2025-11-26 12:59:36,760 | INFO     | process IDs to be killed: [4079765] (in reverse order)
[2025-11-26 14:02:44] 2025-11-26 12:59:36,880 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 14:02:44] 2025-11-26 12:59:36,881 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 14:02:44] 2025-11-26 12:59:36,893 | INFO     | did not find any defunct processes belonging to 4079765
[2025-11-26 14:02:44] 2025-11-26 12:59:36,905 | INFO     | did not find any defunct processes belonging to 4079765
[2025-11-26 14:02:44] 2025-11-26 12:59:36,907 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 14:02:44] 2025-11-26 12:59:36,908 | INFO     | ready for new job
[2025-11-26 14:02:44] 2025-11-26 12:59:36,908 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 14:02:44] 2025-11-26 12:59:36,913 | INFO     | ***************************************
[2025-11-26 14:02:44] 2025-11-26 12:59:36,913 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 14:02:44] 2025-11-26 12:59:36,913 | INFO     | ***************************************
[2025-11-26 14:02:44] 2025-11-26 12:59:36,913 | INFO     | 
[2025-11-26 14:02:44] 2025-11-26 12:59:36,917 | INFO     | architecture information:
[2025-11-26 14:02:44] 2025-11-26 12:59:36,917 | INFO     | executing command: cat /etc/os-release
[2025-11-26 14:02:44] 2025-11-26 12:59:36,932 | INFO     | cat /etc/os-release:
[2025-11-26 14:02:44] NAME="CentOS Linux"
[2025-11-26 14:02:44] VERSION="7 (Core)"
[2025-11-26 14:02:44] ID="centos"
[2025-11-26 14:02:44] ID_LIKE="rhel fedora"
[2025-11-26 14:02:44] VERSION_ID="7"
[2025-11-26 14:02:44] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 14:02:44] ANSI_COLOR="0;31"
[2025-11-26 14:02:44] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 14:02:44] HOME_URL="https://www.centos.org/"
[2025-11-26 14:02:44] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 14:02:44] 
[2025-11-26 14:02:44] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 14:02:44] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 14:02:44] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 14:02:44] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 14:02:44] 
[2025-11-26 14:02:44] 2025-11-26 12:59:36,932 | INFO     | ***************************************
[2025-11-26 14:02:44] 2025-11-26 12:59:37,435 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/0
[2025-11-26 14:02:44] 2025-11-26 12:59:37,449 | INFO     | sufficient remaining disk space (669469638656 B)
[2025-11-26 14:02:44] 2025-11-26 12:59:37,450 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 14:02:44] 2025-11-26 12:59:37,450 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 14:02:44] 2025-11-26 12:59:37,450 | INFO     | update_server=False
[2025-11-26 14:02:44] 2025-11-26 12:59:37,450 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 14:02:44] 2025-11-26 12:59:37,450 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-26 14:02:44] 2025-11-26 12:59:37,451 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 14:02:44] 2025-11-26 12:59:37,451 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 14:02:44] 2025-11-26 12:59:37,451 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 14:02:44] 2025-11-26 12:59:38,131 | INFO     | all data control threads have been joined
[2025-11-26 14:02:44] 2025-11-26 12:59:38,335 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 14:02:44] 2025-11-26 12:59:38,399 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 14:02:44] 2025-11-26 12:59:38,399 | INFO     | aborting loop
[2025-11-26 14:02:44] 2025-11-26 12:59:38,455 | INFO     | [job] retrieve thread has finished
[2025-11-26 14:02:44] 2025-11-26 12:59:38,508 | INFO     | [payload] validate_post thread has finished
[2025-11-26 14:02:44] 2025-11-26 12:59:38,535 | INFO     | [job] validate thread has finished
[2025-11-26 14:02:44] 2025-11-26 12:59:38,590 | INFO     | all job control threads have been joined
[2025-11-26 14:02:44] 2025-11-26 12:59:38,620 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 14:02:44] 2025-11-26 12:59:38,654 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 14:02:44] 2025-11-26 12:59:38,840 | INFO     | all payload control threads have been joined
[2025-11-26 14:02:44] 2025-11-26 12:59:38,871 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 14:02:44] 2025-11-26 12:59:39,134 | INFO     | [data] control thread has finished
[2025-11-26 14:02:44] 2025-11-26 12:59:39,152 | INFO     | [data] copytool_in thread has finished
[2025-11-26 14:02:44] 2025-11-26 12:59:39,404 | INFO     | [job] job monitor thread has finished
[2025-11-26 14:02:44] 2025-11-26 12:59:39,596 | INFO     | [job] control thread has finished
[2025-11-26 14:02:44] 2025-11-26 12:59:39,679 | INFO     | [payload] failed_post thread has finished
[2025-11-26 14:02:44] 2025-11-26 12:59:39,832 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 14:02:44] 2025-11-26 12:59:39,845 | INFO     | [payload] control thread has finished
[2025-11-26 14:02:44] 2025-11-26 12:59:39,922 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 14:02:44] 2025-11-26 12:59:40,340 | INFO     | [data] copytool_out thread has finished
[2025-11-26 14:02:44] 2025-11-26 12:59:40,555 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 14:02:44] 2025-11-26 12:59:40,837 | INFO     | [job] queue monitor thread has finished
[2025-11-26 14:02:44] 2025-11-26 12:59:44,561 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 14:02:44] 2025-11-26 12:59:58,208 | INFO     | [monitor] cgroup control has ended
[2025-11-26 14:02:44] 2025-11-26 12:59:58,454 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23371964749632)>', '<ExcThread(monitor, started 23371655911168)>']
[2025-11-26 14:02:44] 2025-11-26 12:59:58,544 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 14:02:44] 2025-11-26 12:59:58,544 | INFO     | [monitor] control thread has ended
[2025-11-26 14:02:44] 2025-11-26 13:00:03,479 | INFO     | all workflow threads have been joined
[2025-11-26 14:02:44] 2025-11-26 13:00:03,479 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 14:02:44] 2025-11-26 13:00:03,480 | INFO     | traces error code: 0
[2025-11-26 14:02:44] 2025-11-26 13:00:03,480 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 14:02:44] 2025-11-26 13:00:03,633 [wrapper] ==== pilot stdout END ====
[2025-11-26 14:02:44] 2025-11-26 13:00:03,635 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 14:02:44] 2025-11-26 13:00:03,638 [wrapper] pilotpid: 4072801
[2025-11-26 14:02:44] 2025-11-26 13:00:03,641 [wrapper] Pilot exit status: 0
[2025-11-26 14:02:44] 2025-11-26 13:00:03,651 [wrapper] pandaids: 6893874645
[2025-11-26 14:02:44] 2025-11-26 13:00:03,731 [wrapper] cleanup supervisor_pilot  768314 4072802
[2025-11-26 14:02:44] 2025-11-26 13:00:03,734 [wrapper] Test setup, not cleaning
[2025-11-26 14:02:44] 2025-11-26 13:00:03,737 [wrapper] apfmon messages muted
[2025-11-26 14:02:44] 2025-11-26 13:00:03,740 [wrapper] ==== wrapper stdout END ====
[2025-11-26 14:02:44] 2025-11-26 13:00:03,742 [wrapper] ==== wrapper stderr END ====
[2025-11-26 14:02:44]  *** Error codes and diagnostics ***
[2025-11-26 14:02:44]     "exeErrorCode": 0,
[2025-11-26 14:02:44]     "exeErrorDiag": "",
[2025-11-26 14:02:44]     "pilotErrorCode": 0,
[2025-11-26 14:02:44]     "pilotErrorDiag": "",
[2025-11-26 14:02:44]  *** Listing of results directory ***
[2025-11-26 14:02:44] total 1341768
[2025-11-26 14:02:44] -rw-r--r-- 1 boinc boinc    576529 Nov 20 17:08 pilot3.tar.gz
[2025-11-26 14:02:44] -rw-r--r-- 1 boinc boinc      5112 Nov 20 17:16 queuedata.json
[2025-11-26 14:02:44] -rwx------ 1 boinc boinc     36292 Nov 20 17:18 runpilot2-wrapper.sh
[2025-11-26 14:02:44] -rw-r--r-- 1 boinc boinc       100 Nov 25 19:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 14:02:44] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 19:23 run_atlas
[2025-11-26 14:02:44] -rw-r--r-- 1 boinc boinc       105 Nov 25 19:23 job.xml
[2025-11-26 14:02:44] -rw-r--r-- 2 boinc boinc 411694605 Nov 25 19:23 EVNT.47493127._000730.pool.root.1
[2025-11-26 14:02:44] -rw-r--r-- 2 boinc boinc     15847 Nov 25 19:23 start_atlas.sh
[2025-11-26 14:02:44] drwxrwx--x 2 boinc boinc      4096 Nov 25 19:23 shared
[2025-11-26 14:02:44] -rw-r--r-- 2 boinc boinc    590103 Nov 25 19:23 input.tar.gz
[2025-11-26 14:02:44] -rw-r--r-- 1 boinc boinc         0 Nov 25 19:23 boinc_lockfile
[2025-11-26 14:02:44] -rw-r--r-- 1 boinc boinc      2784 Nov 25 19:23 pandaJob.out
[2025-11-26 14:02:44] -rw------- 1 boinc boinc    991543 Nov 25 19:24 agis_schedconf.cvmfs.json
[2025-11-26 14:02:44] drwx------ 5 boinc boinc      4096 Nov 25 19:24 pilot3
[2025-11-26 14:02:44] -rw-r--r-- 1 boinc boinc      6641 Nov 25 20:25 init_data.xml
[2025-11-26 14:02:44] -rw-r--r-- 1 boinc boinc       532 Nov 26 13:54 boinc_task_state.xml
[2025-11-26 14:02:44] -rw------- 1 boinc boinc 936089690 Nov 26 13:58 HITS.47523449._007298.pool.root.1
[2025-11-26 14:02:44] -rw------- 1 boinc boinc        95 Nov 26 13:59 pilot_heartbeat.json
[2025-11-26 14:02:44] -rw------- 1 boinc boinc      1046 Nov 26 13:59 memory_monitor_summary.json
[2025-11-26 14:02:44] -rw------- 1 boinc boinc   1516240 Nov 26 13:59 agis_ddmendpoints.agis.ALL.json
[2025-11-26 14:02:44] -rw------- 1 boinc boinc   1814255 Nov 26 13:59 log.47523449._007298.job.log.tgz.1
[2025-11-26 14:02:44] -rw------- 1 boinc boinc      8629 Nov 26 13:59 heartbeat.json
[2025-11-26 14:02:44] -rw------- 1 boinc boinc      4562 Nov 26 14:00 pilotlog.txt
[2025-11-26 14:02:44] -rw------- 1 boinc boinc   9320093 Nov 26 14:00 log.47523449._007298.job.log.1
[2025-11-26 14:02:44] -rw------- 1 boinc boinc       353 Nov 26 14:00 output.list
[2025-11-26 14:02:44] -rw-r--r-- 1 boinc boinc       620 Nov 26 14:00 runtime_log
[2025-11-26 14:02:44] -rw------- 1 boinc boinc  11151360 Nov 26 14:00 result.tar.gz
[2025-11-26 14:02:44] -rw------- 1 boinc boinc       670 Nov 26 14:00 tNEODmYXMg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmctGKDmsJeFNo.diag
[2025-11-26 14:02:44] -rw-r--r-- 1 boinc boinc      9206 Nov 26 14:00 runtime_log.err
[2025-11-26 14:02:44] -rw-r--r-- 1 boinc boinc        28 Nov 26 14:02 wrapper_checkpoint.txt
[2025-11-26 14:02:44] -rw-r--r-- 1 boinc boinc      8192 Nov 26 14:02 boinc_mmap_file
[2025-11-26 14:02:44] -rw-r--r-- 1 boinc boinc     21143 Nov 26 14:02 stderr.txt
[2025-11-26 14:02:44] HITS file was successfully produced:
[2025-11-26 14:02:44] -rw------- 1 boinc boinc 936089690 Nov 26 13:58 shared/HITS.pool.root.1
[2025-11-26 14:02:44]  *** Contents of shared directory: ***
[2025-11-26 14:02:44] total 1327696
[2025-11-26 14:02:44] -rw-r--r-- 2 boinc boinc 411694605 Nov 25 19:23 ATLAS.root_0
[2025-11-26 14:02:44] -rw-r--r-- 2 boinc boinc     15847 Nov 25 19:23 start_atlas.sh
[2025-11-26 14:02:44] -rw-r--r-- 2 boinc boinc    590103 Nov 25 19:23 input.tar.gz
[2025-11-26 14:02:44] -rw------- 1 boinc boinc 936089690 Nov 26 13:58 HITS.pool.root.1
[2025-11-26 14:02:44] -rw------- 1 boinc boinc  11151360 Nov 26 14:00 result.tar.gz
14:02:46 (4068545): run_atlas exited; CPU time 262854.565002
14:02:46 (4068545): called boinc_finish(0)

</stderr_txt>
]]>

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