Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:32:06 (2010015): wrapper (7.7.26015): starting
00:32:06 (2010015): wrapper: running run_atlas (--nthreads 4)
[2025-11-21 00:32:06] Arguments: --nthreads 4
[2025-11-21 00:32:06] Threads: 4
[2025-11-21 00:32:06] Checking for CVMFS
[2025-11-21 00:32:06] No cvmfs_config command found, will try listing directly
[2025-11-21 00:32:06] CVMFS is ok
[2025-11-21 00:32:06] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 00:32:06] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 00:32:06] Further information can be found at the LHC@home message board.
[2025-11-21 00:32:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 00:32:06] Checking for apptainer binary...
[2025-11-21 00:32:06] which: no apptainer in ((null))
[2025-11-21 00:32:06] apptainer is not installed, using version from CVMFS
[2025-11-21 00:32:06] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 00:32:06] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut03.grid.cesnet.cz
[2025-11-21 00:32:06] apptainer works
[2025-11-21 00:32:06] Set ATHENA_PROC_NUMBER=4
[2025-11-21 00:32:06] Set ATHENA_CORE_NUMBER=4
[2025-11-21 00:32:06] Starting ATLAS job with PandaID=6891599140
[2025-11-21 00:32:06] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 19:18:53]  *** The last 200 lines of the pilot log: ***
[2025-11-21 19:18:53] 2025-11-21 18:00:20,509 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-21 19:18:53] 2025-11-21 18:00:20,519 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2746.0691093749997
[2025-11-21 19:18:53] 2025-11-21 18:00:20,531 | INFO     | using path: /scratch/boinc/var/slot56/slots/0/PanDA_Pilot-6891599140/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 19:18:53] 2025-11-21 18:00:20,531 | INFO     | extracted standard info from prmon json
[2025-11-21 19:18:53] 2025-11-21 18:00:20,532 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 19:18:53] 2025-11-21 18:00:20,532 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 19:18:53] 2025-11-21 18:00:20,549 | INFO     | fitting pss+swap vs Time
[2025-11-21 19:18:53] 2025-11-21 18:00:20,551 | INFO     | sum of square deviations: 401566684010.4558
[2025-11-21 19:18:53] 2025-11-21 18:00:20,574 | INFO     | sum of deviations: 1041838751199.2329
[2025-11-21 19:18:53] 2025-11-21 18:00:20,574 | INFO     | mean x: 1763714781.506422
[2025-11-21 19:18:53] 2025-11-21 18:00:20,574 | INFO     | mean y: 2282789.1807339448
[2025-11-21 19:18:53] 2025-11-21 18:00:20,574 | INFO     | intersect: -4573560971.275337
[2025-11-21 19:18:53] 2025-11-21 18:00:20,576 | INFO     | chi2: 4.488636630655155
[2025-11-21 19:18:53] 2025-11-21 18:00:20,577 | INFO     | sum of square deviations: 396065848122.9542
[2025-11-21 19:18:53] 2025-11-21 18:00:20,599 | INFO     | sum of deviations: 1292653844994.8848
[2025-11-21 19:18:53] 2025-11-21 18:00:20,600 | INFO     | mean x: 1763714629.0064516
[2025-11-21 19:18:53] 2025-11-21 18:00:20,600 | INFO     | mean y: 2289737.873732719
[2025-11-21 19:18:53] 2025-11-21 18:00:20,600 | INFO     | intersect: -5754006866.50089
[2025-11-21 19:18:53] 2025-11-21 18:00:20,601 | INFO     | chi2: 1.9364728991974471
[2025-11-21 19:18:53] 2025-11-21 18:00:20,601 | INFO     | current chi2=1.9364728991974471 (change=56.85832785010262 %)
[2025-11-21 19:18:53] 2025-11-21 18:00:20,603 | INFO     | sum of square deviations: 390615478297.9546
[2025-11-21 19:18:53] 2025-11-21 18:00:20,625 | INFO     | sum of deviations: 1295995832778.1523
[2025-11-21 19:18:53] 2025-11-21 18:00:20,625 | INFO     | mean x: 1763714476.5064814
[2025-11-21 19:18:53] 2025-11-21 18:00:20,625 | INFO     | mean y: 2289829.6212962964
[2025-11-21 19:18:53] 2025-11-21 18:00:20,625 | INFO     | intersect: -5849415335.065901
[2025-11-21 19:18:53] 2025-11-21 18:00:20,627 | INFO     | chi2: 1.8997267954671906
[2025-11-21 19:18:53] 2025-11-21 18:00:20,627 | INFO     | current chi2=1.8997267954671906 (change=1.8975790337931207 %)
[2025-11-21 19:18:53] 2025-11-21 18:00:20,627 | INFO     | right removable region: 1079
[2025-11-21 19:18:53] 2025-11-21 18:00:20,628 | INFO     | sum of square deviations: 396065843852.9542
[2025-11-21 19:18:53] 2025-11-21 18:00:20,651 | INFO     | sum of deviations: 839824368105.696
[2025-11-21 19:18:53] 2025-11-21 18:00:20,651 | INFO     | mean x: 1763714934.0064516
[2025-11-21 19:18:53] 2025-11-21 18:00:20,651 | INFO     | mean y: 2288381.6147465436
[2025-11-21 19:18:53] 2025-11-21 18:00:20,651 | INFO     | intersect: -3737521054.0114946
[2025-11-21 19:18:53] 2025-11-21 18:00:20,652 | INFO     | chi2: 2.691752136541449
[2025-11-21 19:18:53] 2025-11-21 18:00:20,653 | INFO     | current chi2=2.691752136541449 (change=40.031854702648 %)
[2025-11-21 19:18:53] 2025-11-21 18:00:20,654 | INFO     | sum of square deviations: 390615469757.9546
[2025-11-21 19:18:53] 2025-11-21 18:00:20,676 | INFO     | sum of deviations: 804288120079.2792
[2025-11-21 19:18:53] 2025-11-21 18:00:20,676 | INFO     | mean x: 1763715086.5064814
[2025-11-21 19:18:53] 2025-11-21 18:00:20,676 | INFO     | mean y: 2289375.5314814816
[2025-11-21 19:18:53] 2025-11-21 18:00:20,677 | INFO     | intersect: -3629249058.316923
[2025-11-21 19:18:53] 2025-11-21 18:00:20,678 | INFO     | chi2: 2.6722075631549567
[2025-11-21 19:18:53] 2025-11-21 18:00:20,678 | INFO     | current chi2=2.6722075631549567 (change=0.7260911255968955 %)
[2025-11-21 19:18:53] 2025-11-21 18:00:20,678 | INFO     | left removable region: 20
[2025-11-21 19:18:53] 2025-11-21 18:00:20,679 | INFO     | sum of square deviations: 368269748884.95294
[2025-11-21 19:18:53] 2025-11-21 18:00:20,701 | INFO     | sum of deviations: 1010546772919.3046
[2025-11-21 19:18:53] 2025-11-21 18:00:20,701 | INFO     | mean x: 1763715056.00661
[2025-11-21 19:18:53] 2025-11-21 18:00:20,701 | INFO     | mean y: 2297734.0991501417
[2025-11-21 19:18:53] 2025-11-21 18:00:20,701 | INFO     | intersect: -4837406215.500751
[2025-11-21 19:18:53] 2025-11-21 18:00:20,703 | INFO     | chi2: 0.06658997742482121
[2025-11-21 19:18:53] 2025-11-21 18:00:20,703 | INFO     | current memory leak: 2.74 B/s (using 1059 data points, chi2=0.07)
[2025-11-21 19:18:53] 2025-11-21 18:00:20,704 | INFO     | could have reported an average CPU frequency of 2693 MHz (40 samples)
[2025-11-21 19:18:53] 2025-11-21 18:00:20,704 | INFO     | ..............................
[2025-11-21 19:18:53] 2025-11-21 18:00:20,704 | INFO     | . Timing measurements:
[2025-11-21 19:18:53] 2025-11-21 18:00:20,704 | INFO     | . get job = 0 s
[2025-11-21 19:18:53] 2025-11-21 18:00:20,704 | INFO     | . initial setup = 1 s
[2025-11-21 19:18:53] 2025-11-21 18:00:20,705 | INFO     | . payload setup = 6 s
[2025-11-21 19:18:53] 2025-11-21 18:00:20,705 | INFO     | . stage-in = 0 s
[2025-11-21 19:18:53] 2025-11-21 18:00:20,705 | INFO     | . payload execution = 66446 s
[2025-11-21 19:18:53] 2025-11-21 18:00:20,705 | INFO     | . stage-out = 2 s
[2025-11-21 19:18:53] 2025-11-21 18:00:20,705 | INFO     | . log creation = 0 s
[2025-11-21 19:18:53] 2025-11-21 18:00:20,705 | INFO     | ..............................
[2025-11-21 19:18:53] 2025-11-21 18:00:21,293 | INFO     | 
[2025-11-21 19:18:53] 2025-11-21 18:00:21,293 | INFO     | job summary report
[2025-11-21 19:18:53] 2025-11-21 18:00:21,293 | INFO     | --------------------------------------------------
[2025-11-21 19:18:53] 2025-11-21 18:00:21,293 | INFO     | PanDA job id: 6891599140
[2025-11-21 19:18:53] 2025-11-21 18:00:21,293 | INFO     | task id: 47493068
[2025-11-21 19:18:53] 2025-11-21 18:00:21,293 | INFO     | errors: (none)
[2025-11-21 19:18:53] 2025-11-21 18:00:21,293 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 19:18:53] 2025-11-21 18:00:21,293 | INFO     | pilot state: finished 
[2025-11-21 19:18:53] 2025-11-21 18:00:21,293 | INFO     | transexitcode: 0
[2025-11-21 19:18:53] 2025-11-21 18:00:21,293 | INFO     | exeerrorcode: 0
[2025-11-21 19:18:53] 2025-11-21 18:00:21,294 | INFO     | exeerrordiag: 
[2025-11-21 19:18:53] 2025-11-21 18:00:21,294 | INFO     | exitcode: 0
[2025-11-21 19:18:53] 2025-11-21 18:00:21,294 | INFO     | exitmsg: OK
[2025-11-21 19:18:53] 2025-11-21 18:00:21,294 | INFO     | cpuconsumptiontime: 262551 s
[2025-11-21 19:18:53] 2025-11-21 18:00:21,294 | INFO     | nevents: 1000
[2025-11-21 19:18:53] 2025-11-21 18:00:21,294 | INFO     | neventsw: 0
[2025-11-21 19:18:53] 2025-11-21 18:00:21,294 | INFO     | pid: 2020924
[2025-11-21 19:18:53] 2025-11-21 18:00:21,294 | INFO     | pgrp: 2020924
[2025-11-21 19:18:53] 2025-11-21 18:00:21,294 | INFO     | corecount: 4
[2025-11-21 19:18:53] 2025-11-21 18:00:21,294 | INFO     | event service: False
[2025-11-21 19:18:53] 2025-11-21 18:00:21,294 | INFO     | sizes: {0: 2298636, 1: 2298835, 5: 2299097, 11: 2299153, 66456: 2354291, 66459: 2363307, 66461: 2363491, 66466: 2363737}
[2025-11-21 19:18:53] 2025-11-21 18:00:21,294 | INFO     | --------------------------------------------------
[2025-11-21 19:18:53] 2025-11-21 18:00:21,294 | INFO     | 
[2025-11-21 19:18:53] 2025-11-21 18:00:21,295 | INFO     | executing command: ls -lF /scratch/boinc/var/slot56/slots/0
[2025-11-21 19:18:53] 2025-11-21 18:00:21,318 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 19:18:53] 2025-11-21 18:00:21,319 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 19:18:53] 2025-11-21 18:00:21,319 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 19:18:53] 2025-11-21 18:00:21,319 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 19:18:53] 2025-11-21 18:00:21,319 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 19:18:53] 2025-11-21 18:00:21,319 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 19:18:53] 2025-11-21 18:00:21,319 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 19:18:53] 2025-11-21 18:00:21,319 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 19:18:53] 2025-11-21 18:00:21,319 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 19:18:53] 2025-11-21 18:00:21,319 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 19:18:53] 2025-11-21 18:00:21,319 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 19:18:53] 2025-11-21 18:00:21,319 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 19:18:53] 2025-11-21 18:00:21,320 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 19:18:53] 2025-11-21 18:00:21,320 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 19:18:53] 2025-11-21 18:00:21,320 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 19:18:53] 2025-11-21 18:00:21,320 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 19:18:53] 2025-11-21 18:00:21,320 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 19:18:53] 2025-11-21 18:00:21,320 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 19:18:53] 2025-11-21 18:00:21,320 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 19:18:53] 2025-11-21 18:00:21,320 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 19:18:53] 2025-11-21 18:00:21,320 | INFO     | job 6891599140 has completed (purged errors)
[2025-11-21 19:18:53] 2025-11-21 18:00:21,321 | INFO     | overall cleanup function is called
[2025-11-21 19:18:53] 2025-11-21 18:00:22,333 | INFO     | --- collectZombieJob: --- 10, [2020924]
[2025-11-21 19:18:53] 2025-11-21 18:00:22,334 | INFO     | zombie collector waiting for pid 2020924
[2025-11-21 19:18:53] 2025-11-21 18:00:22,334 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 19:18:53] 2025-11-21 18:00:22,334 | INFO     | collected zombie processes
[2025-11-21 19:18:53] 2025-11-21 18:00:22,334 | INFO     | will attempt to kill all subprocesses of pid=2020924
[2025-11-21 19:18:53] 2025-11-21 18:00:22,754 | INFO     | process IDs to be killed: [2020924] (in reverse order)
[2025-11-21 19:18:53] 2025-11-21 18:00:22,873 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 19:18:53] 2025-11-21 18:00:22,873 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 19:18:53] 2025-11-21 18:00:22,890 | INFO     | did not find any defunct processes belonging to 2020924
[2025-11-21 19:18:53] 2025-11-21 18:00:22,906 | INFO     | did not find any defunct processes belonging to 2020924
[2025-11-21 19:18:53] 2025-11-21 18:00:22,908 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 19:18:53] 2025-11-21 18:00:22,908 | INFO     | ready for new job
[2025-11-21 19:18:53] 2025-11-21 18:00:22,908 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 19:18:53] 2025-11-21 18:00:22,914 | INFO     | ***************************************
[2025-11-21 19:18:53] 2025-11-21 18:00:22,916 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 19:18:53] 2025-11-21 18:00:22,916 | INFO     | ***************************************
[2025-11-21 19:18:53] 2025-11-21 18:00:22,916 | INFO     | 
[2025-11-21 19:18:53] 2025-11-21 18:00:22,920 | INFO     | architecture information:
[2025-11-21 19:18:53] 2025-11-21 18:00:22,921 | INFO     | executing command: cat /etc/os-release
[2025-11-21 19:18:53] 2025-11-21 18:00:22,936 | INFO     | cat /etc/os-release:
[2025-11-21 19:18:53] NAME="CentOS Linux"
[2025-11-21 19:18:53] VERSION="7 (Core)"
[2025-11-21 19:18:53] ID="centos"
[2025-11-21 19:18:53] ID_LIKE="rhel fedora"
[2025-11-21 19:18:53] VERSION_ID="7"
[2025-11-21 19:18:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 19:18:53] ANSI_COLOR="0;31"
[2025-11-21 19:18:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 19:18:53] HOME_URL="https://www.centos.org/"
[2025-11-21 19:18:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 19:18:53] 
[2025-11-21 19:18:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 19:18:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 19:18:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 19:18:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 19:18:53] 
[2025-11-21 19:18:53] 2025-11-21 18:00:22,937 | INFO     | ***************************************
[2025-11-21 19:18:53] 2025-11-21 18:00:23,439 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/0
[2025-11-21 19:18:53] 2025-11-21 18:00:23,456 | INFO     | sufficient remaining disk space (671763922944 B)
[2025-11-21 19:18:53] 2025-11-21 18:00:23,457 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 19:18:53] 2025-11-21 18:00:23,457 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 19:18:53] 2025-11-21 18:00:23,457 | INFO     | update_server=False
[2025-11-21 19:18:53] 2025-11-21 18:00:23,457 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 19:18:53] 2025-11-21 18:00:23,602 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-21 19:18:53] 2025-11-21 18:00:23,602 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-21 19:18:53] 2025-11-21 18:00:23,602 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 19:18:53] 2025-11-21 18:00:23,603 | INFO     | will abort loop
[2025-11-21 19:18:53] 2025-11-21 18:00:23,916 | INFO     | all data control threads have been joined
[2025-11-21 19:18:53] 2025-11-21 18:00:24,182 | INFO     | all payload control threads have been joined
[2025-11-21 19:18:53] 2025-11-21 18:00:24,232 | INFO     | all job control threads have been joined
[2025-11-21 19:18:53] 2025-11-21 18:00:24,237 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 19:18:53] 2025-11-21 18:00:24,463 | INFO     | [job] retrieve thread has finished
[2025-11-21 19:18:53] 2025-11-21 18:00:24,492 | INFO     | [job] validate thread has finished
[2025-11-21 19:18:53] 2025-11-21 18:00:24,608 | INFO     | [job] job monitor thread has finished
[2025-11-21 19:18:53] 2025-11-21 18:00:24,773 | INFO     | [payload] validate_post thread has finished
[2025-11-21 19:18:53] 2025-11-21 18:00:24,922 | INFO     | [data] control thread has finished
[2025-11-21 19:18:53] 2025-11-21 18:00:25,009 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 19:18:53] 2025-11-21 18:00:25,046 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 19:18:53] 2025-11-21 18:00:25,188 | INFO     | [payload] control thread has finished
[2025-11-21 19:18:53] 2025-11-21 18:00:25,238 | INFO     | [job] control thread has finished
[2025-11-21 19:18:53] 2025-11-21 18:00:25,269 | INFO     | [payload] failed_post thread has finished
[2025-11-21 19:18:53] 2025-11-21 18:00:25,367 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 19:18:53] 2025-11-21 18:00:25,451 | INFO     | [data] copytool_in thread has finished
[2025-11-21 19:18:53] 2025-11-21 18:00:25,807 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 19:18:53] 2025-11-21 18:00:26,244 | INFO     | [data] copytool_out thread has finished
[2025-11-21 19:18:53] 2025-11-21 18:00:26,665 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 19:18:53] 2025-11-21 18:00:26,812 | INFO     | [job] queue monitor thread has finished
[2025-11-21 19:18:53] 2025-11-21 18:00:30,671 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 19:18:53] 2025-11-21 18:00:33,976 | INFO     | job.realtimelogging is not enabled
[2025-11-21 19:18:53] 2025-11-21 18:00:34,977 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 19:18:53] 2025-11-21 18:00:53,391 | INFO     | PID=2014024 has CPU usage=9.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-21 19:18:53] 2025-11-21 18:00:53,392 | INFO     | .. there are 5 such processes running
[2025-11-21 19:18:53] 2025-11-21 18:00:53,393 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 19:18:53] 2025-11-21 18:00:53,393 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 19:18:53] 2025-11-21 18:00:53,393 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 19:18:53] 2025-11-21 18:01:09,417 | INFO     | [monitor] cgroup control has ended
[2025-11-21 19:18:53] 2025-11-21 18:01:10,364 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22978036455232)>', '<ExcThread(monitor, started 22977726879488)>']
[2025-11-21 19:18:53] 2025-11-21 18:01:10,461 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 19:18:53] 2025-11-21 18:01:10,462 | INFO     | [monitor] control thread has ended
[2025-11-21 19:18:53] 2025-11-21 18:01:15,389 | INFO     | all workflow threads have been joined
[2025-11-21 19:18:53] 2025-11-21 18:01:15,389 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 19:18:53] 2025-11-21 18:01:15,389 | INFO     | traces error code: 0
[2025-11-21 19:18:53] 2025-11-21 18:01:15,389 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 19:18:53] 2025-11-21 18:01:15,539 [wrapper] ==== pilot stdout END ====
[2025-11-21 19:18:53] 2025-11-21 18:01:15,542 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 19:18:53] 2025-11-21 18:01:15,545 [wrapper] pilotpid: 2014024
[2025-11-21 19:18:53] 2025-11-21 18:01:15,548 [wrapper] Pilot exit status: 0
[2025-11-21 19:18:53] 2025-11-21 18:01:15,560 [wrapper] pandaids: 6891599140
[2025-11-21 19:18:53] 2025-11-21 18:01:15,643 [wrapper] cleanup supervisor_pilot 3080479 2014025
[2025-11-21 19:18:53] 2025-11-21 18:01:15,647 [wrapper] Test setup, not cleaning
[2025-11-21 19:18:53] 2025-11-21 18:01:15,650 [wrapper] apfmon messages muted
[2025-11-21 19:18:53] 2025-11-21 18:01:15,653 [wrapper] ==== wrapper stdout END ====
[2025-11-21 19:18:53] 2025-11-21 18:01:15,656 [wrapper] ==== wrapper stderr END ====
[2025-11-21 19:18:53]  *** Error codes and diagnostics ***
[2025-11-21 19:18:53]     "exeErrorCode": 0,
[2025-11-21 19:18:53]     "exeErrorDiag": "",
[2025-11-21 19:18:53]     "pilotErrorCode": 0,
[2025-11-21 19:18:53]     "pilotErrorDiag": "",
[2025-11-21 19:18:53]  *** Listing of results directory ***
[2025-11-21 19:18:53] total 1332200
[2025-11-21 19:18:53] -rw-r--r-- 1 boinc boinc    576529 Nov 18 19:50 pilot3.tar.gz
[2025-11-21 19:18:53] -rw-r--r-- 1 boinc boinc      5112 Nov 18 20:05 queuedata.json
[2025-11-21 19:18:53] -rwx------ 1 boinc boinc     36292 Nov 18 20:05 runpilot2-wrapper.sh
[2025-11-21 19:18:53] -rw-r--r-- 1 boinc boinc       100 Nov 20 22:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 19:18:53] -rwxr-xr-x 1 boinc boinc      7986 Nov 20 22:57 run_atlas
[2025-11-21 19:18:53] -rw-r--r-- 1 boinc boinc       105 Nov 20 22:57 job.xml
[2025-11-21 19:18:53] -rw-r--r-- 2 boinc boinc 409963532 Nov 21 00:32 EVNT.47493065._000819.pool.root.1
[2025-11-21 19:18:53] -rw-r--r-- 1 boinc boinc      6635 Nov 21 00:32 init_data.xml
[2025-11-21 19:18:53] -rw-r--r-- 2 boinc boinc     15120 Nov 21 00:32 start_atlas.sh
[2025-11-21 19:18:53] drwxrwx--x 2 boinc boinc      4096 Nov 21 00:32 shared
[2025-11-21 19:18:53] -rw-r--r-- 2 boinc boinc    590090 Nov 21 00:32 input.tar.gz
[2025-11-21 19:18:53] -rw-r--r-- 1 boinc boinc         0 Nov 21 00:32 boinc_lockfile
[2025-11-21 19:18:53] -rw-r--r-- 1 boinc boinc      2773 Nov 21 00:32 pandaJob.out
[2025-11-21 19:18:53] -rw------- 1 boinc boinc    989817 Nov 21 00:32 agis_schedconf.cvmfs.json
[2025-11-21 19:18:53] drwx------ 5 boinc boinc      4096 Nov 21 00:32 pilot3
[2025-11-21 19:18:53] -rw-r--r-- 1 boinc boinc       531 Nov 21 18:53 boinc_task_state.xml
[2025-11-21 19:18:53] -rw------- 1 boinc boinc 928085501 Nov 21 18:59 HITS.47493068._006837.pool.root.1
[2025-11-21 19:18:53] -rw------- 1 boinc boinc      1043 Nov 21 19:00 memory_monitor_summary.json
[2025-11-21 19:18:53] -rw------- 1 boinc boinc   1526164 Nov 21 19:00 agis_ddmendpoints.agis.ALL.json
[2025-11-21 19:18:53] -rw------- 1 boinc boinc   1806221 Nov 21 19:00 log.47493068._006837.job.log.tgz.1
[2025-11-21 19:18:53] -rw------- 1 boinc boinc      8629 Nov 21 19:00 heartbeat.json
[2025-11-21 19:18:53] -rw------- 1 boinc boinc        95 Nov 21 19:00 pilot_heartbeat.json
[2025-11-21 19:18:53] -rw------- 1 boinc boinc      5091 Nov 21 19:01 pilotlog.txt
[2025-11-21 19:18:53] -rw------- 1 boinc boinc   9295815 Nov 21 19:01 log.47493068._006837.job.log.1
[2025-11-21 19:18:53] -rw------- 1 boinc boinc       353 Nov 21 19:01 output.list
[2025-11-21 19:18:53] -rw-r--r-- 1 boinc boinc       620 Nov 21 19:01 runtime_log
[2025-11-21 19:18:53] -rw------- 1 boinc boinc  11120640 Nov 21 19:01 result.tar.gz
[2025-11-21 19:18:53] -rw------- 1 boinc boinc       670 Nov 21 19:01 uNPKDmSCgf8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmxOGKDmqI8wmm.diag
[2025-11-21 19:18:53] -rw-r--r-- 1 boinc boinc      9070 Nov 21 19:01 runtime_log.err
[2025-11-21 19:18:53] -rw-r--r-- 1 boinc boinc        28 Nov 21 19:18 wrapper_checkpoint.txt
[2025-11-21 19:18:53] -rw-r--r-- 1 boinc boinc      8192 Nov 21 19:18 boinc_mmap_file
[2025-11-21 19:18:53] -rw-r--r-- 1 boinc boinc     21068 Nov 21 19:18 stderr.txt
[2025-11-21 19:18:53] HITS file was successfully produced:
[2025-11-21 19:18:53] -rw------- 1 boinc boinc 928085501 Nov 21 18:59 shared/HITS.pool.root.1
[2025-11-21 19:18:53]  *** Contents of shared directory: ***
[2025-11-21 19:18:53] total 1318156
[2025-11-21 19:18:53] -rw-r--r-- 2 boinc boinc 409963532 Nov 21 00:32 ATLAS.root_0
[2025-11-21 19:18:53] -rw-r--r-- 2 boinc boinc     15120 Nov 21 00:32 start_atlas.sh
[2025-11-21 19:18:53] -rw-r--r-- 2 boinc boinc    590090 Nov 21 00:32 input.tar.gz
[2025-11-21 19:18:53] -rw------- 1 boinc boinc 928085501 Nov 21 18:59 HITS.pool.root.1
[2025-11-21 19:18:53] -rw------- 1 boinc boinc  11120640 Nov 21 19:01 result.tar.gz
19:18:55 (2010015): run_atlas exited; CPU time 264957.711487
19:18:55 (2010015): called boinc_finish(0)

</stderr_txt>
]]>

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