Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:07:16 (2745696): wrapper (7.7.26015): starting
16:07:16 (2745696): wrapper: running run_atlas (--nthreads 4)
[2025-11-24 16:07:16] Arguments: --nthreads 4
[2025-11-24 16:07:16] Threads: 4
[2025-11-24 16:07:16] Checking for CVMFS
[2025-11-24 16:07:16] No cvmfs_config command found, will try listing directly
[2025-11-24 16:07:16] CVMFS is ok
[2025-11-24 16:07:16] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 16:07:16] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 16:07:16] Further information can be found at the LHC@home message board.
[2025-11-24 16:07:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 16:07:16] Checking for apptainer binary...
[2025-11-24 16:07:16] which: no apptainer in ((null))
[2025-11-24 16:07:16] apptainer is not installed, using version from CVMFS
[2025-11-24 16:07:16] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 16:07:16] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut03.grid.cesnet.cz
[2025-11-24 16:07:16] apptainer works
[2025-11-24 16:07:16] Set ATHENA_PROC_NUMBER=4
[2025-11-24 16:07:16] Set ATHENA_CORE_NUMBER=4
[2025-11-24 16:07:16] Starting ATLAS job with PandaID=6893874694
[2025-11-24 16:07:16] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 09:56:06]  *** The last 200 lines of the pilot log: ***
[2025-11-25 09:56:06] 2025-11-25 08:45:21,792 | INFO     | time since job start (63473s) is within the limit (172800.0s)
[2025-11-25 09:56:06] 2025-11-25 08:45:22,266 | INFO     | monitor loop #4539: job 0:6893874694 is in state 'finished'
[2025-11-25 09:56:06] 2025-11-25 08:45:22,266 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-25 09:56:06] 2025-11-25 08:45:22,516 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-25 09:56:06] 2025-11-25 08:45:22,526 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2777.5982031249996
[2025-11-25 09:56:06] 2025-11-25 08:45:22,538 | INFO     | using path: /scratch/boinc/var/slot56/slots/0/PanDA_Pilot-6893874694/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 09:56:06] 2025-11-25 08:45:22,539 | INFO     | extracted standard info from prmon json
[2025-11-25 09:56:06] 2025-11-25 08:45:22,539 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 09:56:06] 2025-11-25 08:45:22,540 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 09:56:06] 2025-11-25 08:45:22,556 | INFO     | fitting pss+swap vs Time
[2025-11-25 09:56:06] 2025-11-25 08:45:22,558 | INFO     | sum of square deviations: 348800592453.7835
[2025-11-25 09:56:06] 2025-11-25 08:45:22,578 | INFO     | sum of deviations: 1296221461392.1104
[2025-11-25 09:56:06] 2025-11-25 08:45:22,578 | INFO     | mean x: 1764028564.5144231
[2025-11-25 09:56:06] 2025-11-25 08:45:22,578 | INFO     | mean y: 2297051.8259615386
[2025-11-25 09:56:06] 2025-11-25 08:45:22,578 | INFO     | intersect: -6553229897.673947
[2025-11-25 09:56:06] 2025-11-25 08:45:22,580 | INFO     | chi2: 4.005611835845201
[2025-11-25 09:56:06] 2025-11-25 08:45:22,581 | INFO     | sum of square deviations: 343793954318.7826
[2025-11-25 09:56:06] 2025-11-25 08:45:22,601 | INFO     | sum of deviations: 1514770449893.29
[2025-11-25 09:56:06] 2025-11-25 08:45:22,602 | INFO     | mean x: 1764028412.0144928
[2025-11-25 09:56:06] 2025-11-25 08:45:22,602 | INFO     | mean y: 2303705.7140096617
[2025-11-25 09:56:06] 2025-11-25 08:45:22,602 | INFO     | intersect: -7770078785.96308
[2025-11-25 09:56:06] 2025-11-25 08:45:22,603 | INFO     | chi2: 1.8958265205114517
[2025-11-25 09:56:06] 2025-11-25 08:45:22,603 | INFO     | current chi2=1.8958265205114517 (change=52.670737999469075 %)
[2025-11-25 09:56:06] 2025-11-25 08:45:22,604 | INFO     | sum of square deviations: 338835456621.2812
[2025-11-25 09:56:06] 2025-11-25 08:45:22,625 | INFO     | sum of deviations: 1517512824438.331
[2025-11-25 09:56:06] 2025-11-25 08:45:22,625 | INFO     | mean x: 1764028259.514563
[2025-11-25 09:56:06] 2025-11-25 08:45:22,625 | INFO     | mean y: 2303788.0446601943
[2025-11-25 09:56:06] 2025-11-25 08:45:22,625 | INFO     | intersect: -7898095813.5147705
[2025-11-25 09:56:06] 2025-11-25 08:45:22,627 | INFO     | chi2: 1.8522284132977784
[2025-11-25 09:56:06] 2025-11-25 08:45:22,627 | INFO     | current chi2=1.8522284132977784 (change=2.2996886446082367 %)
[2025-11-25 09:56:06] 2025-11-25 08:45:22,627 | INFO     | right removable region: 1029
[2025-11-25 09:56:06] 2025-11-25 08:45:22,628 | INFO     | sum of square deviations: 343793945168.7826
[2025-11-25 09:56:06] 2025-11-25 08:45:22,649 | INFO     | sum of deviations: 1103039403959.8684
[2025-11-25 09:56:06] 2025-11-25 08:45:22,649 | INFO     | mean x: 1764028717.0144928
[2025-11-25 09:56:06] 2025-11-25 08:45:22,649 | INFO     | mean y: 2302927.3420289857
[2025-11-25 09:56:06] 2025-11-25 08:45:22,649 | INFO     | intersect: -5657462789.673399
[2025-11-25 09:56:06] 2025-11-25 08:45:22,651 | INFO     | chi2: 2.256169241956199
[2025-11-25 09:56:06] 2025-11-25 08:45:22,651 | INFO     | current chi2=2.256169241956199 (change=43.67479090793785 %)
[2025-11-25 09:56:06] 2025-11-25 08:45:22,652 | INFO     | sum of square deviations: 338835438321.2812
[2025-11-25 09:56:06] 2025-11-25 08:45:22,672 | INFO     | sum of deviations: 1064006974199.8745
[2025-11-25 09:56:06] 2025-11-25 08:45:22,673 | INFO     | mean x: 1764028869.514563
[2025-11-25 09:56:06] 2025-11-25 08:45:22,673 | INFO     | mean y: 2304127.8417475726
[2025-11-25 09:56:06] 2025-11-25 08:45:22,673 | INFO     | intersect: -5537078143.24678
[2025-11-25 09:56:06] 2025-11-25 08:45:22,674 | INFO     | chi2: 2.2357803299376227
[2025-11-25 09:56:06] 2025-11-25 08:45:22,674 | INFO     | current chi2=2.2357803299376227 (change=0.9036960366013232 %)
[2025-11-25 09:56:06] 2025-11-25 08:45:22,674 | INFO     | left removable region: 20
[2025-11-25 09:56:06] 2025-11-25 08:45:22,675 | INFO     | sum of square deviations: 318530237017.805
[2025-11-25 09:56:06] 2025-11-25 08:45:22,694 | INFO     | sum of deviations: 1221188893934.369
[2025-11-25 09:56:06] 2025-11-25 08:45:22,694 | INFO     | mean x: 1764028839.013875
[2025-11-25 09:56:06] 2025-11-25 08:45:22,694 | INFO     | mean y: 2312825.473736373
[2025-11-25 09:56:06] 2025-11-25 08:45:22,695 | INFO     | intersect: -6760663421.152634
[2025-11-25 09:56:06] 2025-11-25 08:45:22,696 | INFO     | chi2: 0.0616858676117156
[2025-11-25 09:56:06] 2025-11-25 08:45:22,696 | INFO     | current memory leak: 3.83 B/s (using 1009 data points, chi2=0.06)
[2025-11-25 09:56:06] 2025-11-25 08:45:22,697 | INFO     | could have reported an average CPU frequency of 2675 MHz (38 samples)
[2025-11-25 09:56:06] 2025-11-25 08:45:22,697 | INFO     | ..............................
[2025-11-25 09:56:06] 2025-11-25 08:45:22,698 | INFO     | . Timing measurements:
[2025-11-25 09:56:06] 2025-11-25 08:45:22,698 | INFO     | . get job = 0 s
[2025-11-25 09:56:06] 2025-11-25 08:45:22,698 | INFO     | . initial setup = 1 s
[2025-11-25 09:56:06] 2025-11-25 08:45:22,698 | INFO     | . payload setup = 6 s
[2025-11-25 09:56:06] 2025-11-25 08:45:22,698 | INFO     | . stage-in = 0 s
[2025-11-25 09:56:06] 2025-11-25 08:45:22,698 | INFO     | . payload execution = 63439 s
[2025-11-25 09:56:06] 2025-11-25 08:45:22,698 | INFO     | . stage-out = 2 s
[2025-11-25 09:56:06] 2025-11-25 08:45:22,698 | INFO     | . log creation = 0 s
[2025-11-25 09:56:06] 2025-11-25 08:45:22,698 | INFO     | ..............................
[2025-11-25 09:56:06] 2025-11-25 08:45:22,792 | INFO     | 
[2025-11-25 09:56:06] 2025-11-25 08:45:22,792 | INFO     | job summary report
[2025-11-25 09:56:06] 2025-11-25 08:45:22,792 | INFO     | --------------------------------------------------
[2025-11-25 09:56:06] 2025-11-25 08:45:22,792 | INFO     | PanDA job id: 6893874694
[2025-11-25 09:56:06] 2025-11-25 08:45:22,793 | INFO     | task id: 47523449
[2025-11-25 09:56:06] 2025-11-25 08:45:22,793 | INFO     | errors: (none)
[2025-11-25 09:56:06] 2025-11-25 08:45:22,793 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 09:56:06] 2025-11-25 08:45:22,793 | INFO     | pilot state: finished 
[2025-11-25 09:56:06] 2025-11-25 08:45:22,793 | INFO     | transexitcode: 0
[2025-11-25 09:56:06] 2025-11-25 08:45:22,793 | INFO     | exeerrorcode: 0
[2025-11-25 09:56:06] 2025-11-25 08:45:22,793 | INFO     | exeerrordiag: 
[2025-11-25 09:56:06] 2025-11-25 08:45:22,793 | INFO     | exitcode: 0
[2025-11-25 09:56:06] 2025-11-25 08:45:22,793 | INFO     | exitmsg: OK
[2025-11-25 09:56:06] 2025-11-25 08:45:22,793 | INFO     | cpuconsumptiontime: 250487 s
[2025-11-25 09:56:06] 2025-11-25 08:45:22,793 | INFO     | nevents: 1000
[2025-11-25 09:56:06] 2025-11-25 08:45:22,793 | INFO     | neventsw: 0
[2025-11-25 09:56:06] 2025-11-25 08:45:22,794 | INFO     | pid: 2756764
[2025-11-25 09:56:06] 2025-11-25 08:45:22,794 | INFO     | pgrp: 2756764
[2025-11-25 09:56:06] 2025-11-25 08:45:22,794 | INFO     | corecount: 4
[2025-11-25 09:56:06] 2025-11-25 08:45:22,794 | INFO     | event service: False
[2025-11-25 09:56:06] 2025-11-25 08:45:22,794 | INFO     | sizes: {0: 2283475, 1: 2284342, 5: 2284604, 12: 2284660, 63449: 2338918, 63453: 2347939, 63454: 2348123, 63459: 2348369}
[2025-11-25 09:56:06] 2025-11-25 08:45:22,794 | INFO     | --------------------------------------------------
[2025-11-25 09:56:06] 2025-11-25 08:45:22,794 | INFO     | 
[2025-11-25 09:56:06] 2025-11-25 08:45:22,794 | INFO     | executing command: ls -lF /scratch/boinc/var/slot56/slots/0
[2025-11-25 09:56:06] 2025-11-25 08:45:22,817 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 09:56:06] 2025-11-25 08:45:22,817 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 09:56:06] 2025-11-25 08:45:22,817 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 09:56:06] 2025-11-25 08:45:22,817 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 09:56:06] 2025-11-25 08:45:22,818 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 09:56:06] 2025-11-25 08:45:22,818 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 09:56:06] 2025-11-25 08:45:22,818 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 09:56:06] 2025-11-25 08:45:22,818 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 09:56:06] 2025-11-25 08:45:22,818 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 09:56:06] 2025-11-25 08:45:22,818 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 09:56:06] 2025-11-25 08:45:22,818 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 09:56:06] 2025-11-25 08:45:22,818 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 09:56:06] 2025-11-25 08:45:22,818 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 09:56:06] 2025-11-25 08:45:22,818 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 09:56:06] 2025-11-25 08:45:22,818 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 09:56:06] 2025-11-25 08:45:22,818 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 09:56:06] 2025-11-25 08:45:22,818 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 09:56:06] 2025-11-25 08:45:22,819 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 09:56:06] 2025-11-25 08:45:22,819 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 09:56:06] 2025-11-25 08:45:22,819 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 09:56:06] 2025-11-25 08:45:22,819 | INFO     | job 6893874694 has completed (purged errors)
[2025-11-25 09:56:06] 2025-11-25 08:45:22,819 | INFO     | overall cleanup function is called
[2025-11-25 09:56:06] 2025-11-25 08:45:23,832 | INFO     | --- collectZombieJob: --- 10, [2756764]
[2025-11-25 09:56:06] 2025-11-25 08:45:23,833 | INFO     | zombie collector waiting for pid 2756764
[2025-11-25 09:56:06] 2025-11-25 08:45:23,833 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 09:56:06] 2025-11-25 08:45:23,833 | INFO     | collected zombie processes
[2025-11-25 09:56:06] 2025-11-25 08:45:23,833 | INFO     | will attempt to kill all subprocesses of pid=2756764
[2025-11-25 09:56:06] 2025-11-25 08:45:24,218 | INFO     | process IDs to be killed: [2756764] (in reverse order)
[2025-11-25 09:56:06] 2025-11-25 08:45:24,331 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 09:56:06] 2025-11-25 08:45:24,332 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 09:56:06] 2025-11-25 08:45:24,345 | INFO     | did not find any defunct processes belonging to 2756764
[2025-11-25 09:56:06] 2025-11-25 08:45:24,358 | INFO     | did not find any defunct processes belonging to 2756764
[2025-11-25 09:56:06] 2025-11-25 08:45:24,360 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 09:56:06] 2025-11-25 08:45:24,360 | INFO     | ready for new job
[2025-11-25 09:56:06] 2025-11-25 08:45:24,360 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 09:56:06] 2025-11-25 08:45:24,366 | INFO     | ***************************************
[2025-11-25 09:56:06] 2025-11-25 08:45:24,367 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 09:56:06] 2025-11-25 08:45:24,367 | INFO     | ***************************************
[2025-11-25 09:56:06] 2025-11-25 08:45:24,367 | INFO     | 
[2025-11-25 09:56:06] 2025-11-25 08:45:24,371 | INFO     | architecture information:
[2025-11-25 09:56:06] 2025-11-25 08:45:24,371 | INFO     | executing command: cat /etc/os-release
[2025-11-25 09:56:06] 2025-11-25 08:45:24,390 | INFO     | cat /etc/os-release:
[2025-11-25 09:56:06] NAME="CentOS Linux"
[2025-11-25 09:56:06] VERSION="7 (Core)"
[2025-11-25 09:56:06] ID="centos"
[2025-11-25 09:56:06] ID_LIKE="rhel fedora"
[2025-11-25 09:56:06] VERSION_ID="7"
[2025-11-25 09:56:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 09:56:06] ANSI_COLOR="0;31"
[2025-11-25 09:56:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 09:56:06] HOME_URL="https://www.centos.org/"
[2025-11-25 09:56:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 09:56:06] 
[2025-11-25 09:56:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 09:56:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 09:56:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 09:56:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 09:56:06] 
[2025-11-25 09:56:06] 2025-11-25 08:45:24,390 | INFO     | ***************************************
[2025-11-25 09:56:06] 2025-11-25 08:45:24,893 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/0
[2025-11-25 09:56:06] 2025-11-25 08:45:24,912 | INFO     | sufficient remaining disk space (646785794048 B)
[2025-11-25 09:56:06] 2025-11-25 08:45:24,912 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 09:56:06] 2025-11-25 08:45:24,912 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 09:56:06] 2025-11-25 08:45:24,913 | INFO     | update_server=False
[2025-11-25 09:56:06] 2025-11-25 08:45:24,913 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 09:56:06] 2025-11-25 08:45:25,092 | INFO     | all data control threads have been joined
[2025-11-25 09:56:06] 2025-11-25 08:45:25,288 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 09:56:06] 2025-11-25 08:45:25,691 | INFO     | all job control threads have been joined
[2025-11-25 09:56:06] 2025-11-25 08:45:25,774 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 09:56:06] 2025-11-25 08:45:25,774 | INFO     | aborting loop
[2025-11-25 09:56:06] 2025-11-25 08:45:25,918 | INFO     | [job] retrieve thread has finished
[2025-11-25 09:56:06] 2025-11-25 08:45:26,080 | INFO     | all payload control threads have been joined
[2025-11-25 09:56:06] 2025-11-25 08:45:26,096 | INFO     | [data] control thread has finished
[2025-11-25 09:56:06] 2025-11-25 08:45:26,263 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 09:56:06] 2025-11-25 08:45:26,264 | INFO     | [payload] failed_post thread has finished
[2025-11-25 09:56:06] 2025-11-25 08:45:26,486 | INFO     | [data] copytool_in thread has finished
[2025-11-25 09:56:06] 2025-11-25 08:45:26,658 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 09:56:06] 2025-11-25 08:45:26,697 | INFO     | [job] control thread has finished
[2025-11-25 09:56:06] 2025-11-25 08:45:26,779 | INFO     | [job] job monitor thread has finished
[2025-11-25 09:56:06] 2025-11-25 08:45:27,043 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 09:56:06] 2025-11-25 08:45:27,085 | INFO     | [payload] control thread has finished
[2025-11-25 09:56:06] 2025-11-25 08:45:27,098 | INFO     | [payload] validate_post thread has finished
[2025-11-25 09:56:06] 2025-11-25 08:45:27,260 | INFO     | [job] validate thread has finished
[2025-11-25 09:56:06] 2025-11-25 08:45:27,293 | INFO     | [data] copytool_out thread has finished
[2025-11-25 09:56:06] 2025-11-25 08:45:27,305 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 09:56:06] 2025-11-25 08:45:27,803 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 09:56:06] 2025-11-25 08:45:28,019 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 09:56:06] 2025-11-25 08:45:28,808 | INFO     | [job] queue monitor thread has finished
[2025-11-25 09:56:06] 2025-11-25 08:45:32,023 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 09:56:06] 2025-11-25 08:45:55,438 | INFO     | PID=2749718 has CPU usage=10.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-25 09:56:06] 2025-11-25 08:45:55,438 | INFO     | .. there are 3 such processes running
[2025-11-25 09:56:06] 2025-11-25 08:45:55,439 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 09:56:06] 2025-11-25 08:45:55,439 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 09:56:06] 2025-11-25 08:45:55,439 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 09:56:06] 2025-11-25 08:46:12,311 | INFO     | [monitor] cgroup control has ended
[2025-11-25 09:56:06] 2025-11-25 08:46:13,042 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23041477871424)>', '<ExcThread(monitor, started 23041228613376)>']
[2025-11-25 09:56:06] 2025-11-25 08:46:13,527 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 09:56:06] 2025-11-25 08:46:13,528 | INFO     | [monitor] control thread has ended
[2025-11-25 09:56:06] 2025-11-25 08:46:18,067 | INFO     | all workflow threads have been joined
[2025-11-25 09:56:06] 2025-11-25 08:46:18,068 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 09:56:06] 2025-11-25 08:46:18,068 | INFO     | traces error code: 0
[2025-11-25 09:56:06] 2025-11-25 08:46:18,068 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 09:56:06] 2025-11-25 08:46:18,220 [wrapper] ==== pilot stdout END ====
[2025-11-25 09:56:06] 2025-11-25 08:46:18,222 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 09:56:06] 2025-11-25 08:46:18,225 [wrapper] pilotpid: 2749718
[2025-11-25 09:56:06] 2025-11-25 08:46:18,228 [wrapper] Pilot exit status: 0
[2025-11-25 09:56:06] 2025-11-25 08:46:18,236 [wrapper] pandaids: 6893874694
[2025-11-25 09:56:06] 2025-11-25 08:46:18,312 [wrapper] cleanup supervisor_pilot 3628698 2749719
[2025-11-25 09:56:06] 2025-11-25 08:46:18,315 [wrapper] Test setup, not cleaning
[2025-11-25 09:56:06] 2025-11-25 08:46:18,317 [wrapper] apfmon messages muted
[2025-11-25 09:56:06] 2025-11-25 08:46:18,320 [wrapper] ==== wrapper stdout END ====
[2025-11-25 09:56:06] 2025-11-25 08:46:18,322 [wrapper] ==== wrapper stderr END ====
[2025-11-25 09:56:06]  *** Error codes and diagnostics ***
[2025-11-25 09:56:06]     "exeErrorCode": 0,
[2025-11-25 09:56:06]     "exeErrorDiag": "",
[2025-11-25 09:56:06]     "pilotErrorCode": 0,
[2025-11-25 09:56:06]     "pilotErrorDiag": "",
[2025-11-25 09:56:06]  *** Listing of results directory ***
[2025-11-25 09:56:06] total 1319336
[2025-11-25 09:56:06] -rw-r--r-- 1 boinc boinc    576529 Nov 20 17:08 pilot3.tar.gz
[2025-11-25 09:56:06] -rw-r--r-- 1 boinc boinc      5112 Nov 20 17:16 queuedata.json
[2025-11-25 09:56:06] -rwx------ 1 boinc boinc     36292 Nov 20 17:16 runpilot2-wrapper.sh
[2025-11-25 09:56:06] -rw-r--r-- 1 boinc boinc       100 Nov 24 16:07 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 09:56:06] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 16:07 run_atlas
[2025-11-25 09:56:06] -rw-r--r-- 1 boinc boinc       105 Nov 24 16:07 job.xml
[2025-11-25 09:56:06] -rw-r--r-- 2 boinc boinc 408437318 Nov 24 16:07 EVNT.47493127._000732.pool.root.1
[2025-11-25 09:56:06] -rw-r--r-- 1 boinc boinc      6636 Nov 24 16:07 init_data.xml
[2025-11-25 09:56:06] -rw-r--r-- 2 boinc boinc     15847 Nov 24 16:07 start_atlas.sh
[2025-11-25 09:56:06] drwxrwx--x 2 boinc boinc      4096 Nov 24 16:07 shared
[2025-11-25 09:56:06] -rw-r--r-- 2 boinc boinc    590097 Nov 24 16:07 input.tar.gz
[2025-11-25 09:56:06] -rw-r--r-- 1 boinc boinc         0 Nov 24 16:07 boinc_lockfile
[2025-11-25 09:56:06] -rw-r--r-- 1 boinc boinc      2782 Nov 24 16:07 pandaJob.out
[2025-11-25 09:56:06] -rw------- 1 boinc boinc    988283 Nov 24 16:07 agis_schedconf.cvmfs.json
[2025-11-25 09:56:06] drwx------ 5 boinc boinc      4096 Nov 24 16:07 pilot3
[2025-11-25 09:56:06] -rw-r--r-- 1 boinc boinc       532 Nov 25 09:37 boinc_task_state.xml
[2025-11-25 09:56:06] -rw------- 1 boinc boinc 917302607 Nov 25 09:44 HITS.47523449._007311.pool.root.1
[2025-11-25 09:56:06] -rw------- 1 boinc boinc      1047 Nov 25 09:45 memory_monitor_summary.json
[2025-11-25 09:56:06] -rw------- 1 boinc boinc   1516240 Nov 25 09:45 agis_ddmendpoints.agis.ALL.json
[2025-11-25 09:56:06] -rw------- 1 boinc boinc   1775603 Nov 25 09:45 log.47523449._007311.job.log.tgz.1
[2025-11-25 09:56:06] -rw------- 1 boinc boinc      8622 Nov 25 09:45 heartbeat.json
[2025-11-25 09:56:06] -rw------- 1 boinc boinc        95 Nov 25 09:45 pilot_heartbeat.json
[2025-11-25 09:56:06] -rw------- 1 boinc boinc      4834 Nov 25 09:46 pilotlog.txt
[2025-11-25 09:56:06] -rw------- 1 boinc boinc   8898893 Nov 25 09:46 log.47523449._007311.job.log.1
[2025-11-25 09:56:06] -rw------- 1 boinc boinc       353 Nov 25 09:46 output.list
[2025-11-25 09:56:06] -rw-r--r-- 1 boinc boinc       620 Nov 25 09:46 runtime_log
[2025-11-25 09:56:06] -rw------- 1 boinc boinc  10690560 Nov 25 09:46 result.tar.gz
[2025-11-25 09:56:06] -rw-r--r-- 1 boinc boinc      9206 Nov 25 09:46 runtime_log.err
[2025-11-25 09:56:06] -rw------- 1 boinc boinc       670 Nov 25 09:46 FGZLDm4VMg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmatGKDmfLC8Vm.diag
[2025-11-25 09:56:06] -rw-r--r-- 1 boinc boinc        28 Nov 25 09:55 wrapper_checkpoint.txt
[2025-11-25 09:56:06] -rw-r--r-- 1 boinc boinc      8192 Nov 25 09:56 boinc_mmap_file
[2025-11-25 09:56:06] -rw-r--r-- 1 boinc boinc     21121 Nov 25 09:56 stderr.txt
[2025-11-25 09:56:06] HITS file was successfully produced:
[2025-11-25 09:56:06] -rw------- 1 boinc boinc 917302607 Nov 25 09:44 shared/HITS.pool.root.1
[2025-11-25 09:56:06]  *** Contents of shared directory: ***
[2025-11-25 09:56:06] total 1305716
[2025-11-25 09:56:06] -rw-r--r-- 2 boinc boinc 408437318 Nov 24 16:07 ATLAS.root_0
[2025-11-25 09:56:06] -rw-r--r-- 2 boinc boinc     15847 Nov 24 16:07 start_atlas.sh
[2025-11-25 09:56:06] -rw-r--r-- 2 boinc boinc    590097 Nov 24 16:07 input.tar.gz
[2025-11-25 09:56:06] -rw------- 1 boinc boinc 917302607 Nov 25 09:44 HITS.pool.root.1
[2025-11-25 09:56:06] -rw------- 1 boinc boinc  10690560 Nov 25 09:46 result.tar.gz
09:56:08 (2745696): run_atlas exited; CPU time 252819.921690
09:56:08 (2745696): called boinc_finish(0)

</stderr_txt>
]]>

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