Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:43:04 (2615405): wrapper (7.7.26015): starting
11:43:04 (2615405): wrapper: running run_atlas (--nthreads 4)
[2025-11-26 11:43:04] Arguments: --nthreads 4
[2025-11-26 11:43:04] Threads: 4
[2025-11-26 11:43:04] Checking for CVMFS
[2025-11-26 11:43:04] No cvmfs_config command found, will try listing directly
[2025-11-26 11:43:04] CVMFS is ok
[2025-11-26 11:43:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 11:43:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 11:43:04] Further information can be found at the LHC@home message board.
[2025-11-26 11:43:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 11:43:04] Checking for apptainer binary...
[2025-11-26 11:43:04] which: no apptainer in ((null))
[2025-11-26 11:43:04] apptainer is not installed, using version from CVMFS
[2025-11-26 11:43:04] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 11:43:04] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut01.grid.cesnet.cz
[2025-11-26 11:43:04] apptainer works
[2025-11-26 11:43:04] Set ATHENA_PROC_NUMBER=4
[2025-11-26 11:43:04] Set ATHENA_CORE_NUMBER=4
[2025-11-26 11:43:04] Starting ATLAS job with PandaID=6893857889
[2025-11-26 11:43:04] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 05:20:04]  *** The last 200 lines of the pilot log: ***
[2025-11-27 05:20:04] 2025-11-27 04:14:06,789 | INFO     | time since job start (63051s) is within the limit (172800.0s)
[2025-11-27 05:20:04] 2025-11-27 04:14:07,448 | INFO     | monitor loop #4518: job 0:6893857889 is in state 'finished'
[2025-11-27 05:20:04] 2025-11-27 04:14:07,448 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 05:20:04] 2025-11-27 04:14:07,922 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-27 05:20:04] 2025-11-27 04:14:07,932 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2662.075765624999
[2025-11-27 05:20:04] 2025-11-27 04:14:07,945 | INFO     | using path: /scratch/boinc/var/slot56/slots/0/PanDA_Pilot-6893857889/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 05:20:04] 2025-11-27 04:14:07,946 | INFO     | extracted standard info from prmon json
[2025-11-27 05:20:04] 2025-11-27 04:14:07,946 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 05:20:04] 2025-11-27 04:14:07,946 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 05:20:04] 2025-11-27 04:14:07,965 | INFO     | fitting pss+swap vs Time
[2025-11-27 05:20:04] 2025-11-27 04:14:07,967 | INFO     | sum of square deviations: 341805400664.9991
[2025-11-27 05:20:04] 2025-11-27 04:14:07,989 | INFO     | sum of deviations: 793326815629.201
[2025-11-27 05:20:04] 2025-11-27 04:14:07,989 | INFO     | mean x: 1764185299.000968
[2025-11-27 05:20:04] 2025-11-27 04:14:07,989 | INFO     | mean y: 2294913.7986447243
[2025-11-27 05:20:04] 2025-11-27 04:14:07,989 | INFO     | intersect: -4092361000.6876254
[2025-11-27 05:20:04] 2025-11-27 04:14:07,991 | INFO     | chi2: 3.6916933390745204
[2025-11-27 05:20:04] 2025-11-27 04:14:07,992 | INFO     | sum of square deviations: 336866089754.9982
[2025-11-27 05:20:04] 2025-11-27 04:14:08,014 | INFO     | sum of deviations: 997598787305.3762
[2025-11-27 05:20:04] 2025-11-27 04:14:08,015 | INFO     | mean x: 1764185146.5009727
[2025-11-27 05:20:04] 2025-11-27 04:14:08,015 | INFO     | mean y: 2301218.123540856
[2025-11-27 05:20:04] 2025-11-27 04:14:08,015 | INFO     | intersect: -5222175261.570613
[2025-11-27 05:20:04] 2025-11-27 04:14:08,016 | INFO     | chi2: 1.8515129973361544
[2025-11-27 05:20:04] 2025-11-27 04:14:08,016 | INFO     | current chi2=1.8515129973361544 (change=49.84651141689048 %)
[2025-11-27 05:20:04] 2025-11-27 04:14:08,018 | INFO     | sum of square deviations: 331974593694.9991
[2025-11-27 05:20:04] 2025-11-27 04:14:08,040 | INFO     | sum of deviations: 979454082067.5609
[2025-11-27 05:20:04] 2025-11-27 04:14:08,040 | INFO     | mean x: 1764184994.0009775
[2025-11-27 05:20:04] 2025-11-27 04:14:08,040 | INFO     | mean y: 2300652.440860215
[2025-11-27 05:20:04] 2025-11-27 04:14:08,040 | INFO     | intersect: -5202730776.814032
[2025-11-27 05:20:04] 2025-11-27 04:14:08,041 | INFO     | chi2: 1.8507453410923804
[2025-11-27 05:20:04] 2025-11-27 04:14:08,042 | INFO     | current chi2=1.8507453410923804 (change=0.04146102376156195 %)
[2025-11-27 05:20:04] 2025-11-27 04:14:08,042 | INFO     | right removable region: 1022
[2025-11-27 05:20:04] 2025-11-27 04:14:08,043 | INFO     | sum of square deviations: 336866089144.9982
[2025-11-27 05:20:04] 2025-11-27 04:14:08,065 | INFO     | sum of deviations: 610919145230.4669
[2025-11-27 05:20:04] 2025-11-27 04:14:08,065 | INFO     | mean x: 1764185451.5009727
[2025-11-27 05:20:04] 2025-11-27 04:14:08,065 | INFO     | mean y: 2300536.0321011674
[2025-11-27 05:20:04] 2025-11-27 04:14:08,065 | INFO     | intersect: -3197115204.4911013
[2025-11-27 05:20:04] 2025-11-27 04:14:08,066 | INFO     | chi2: 1.9603603787358868
[2025-11-27 05:20:04] 2025-11-27 04:14:08,067 | INFO     | current chi2=1.9603603787358868 (change=46.89807092082751 %)
[2025-11-27 05:20:04] 2025-11-27 04:14:08,068 | INFO     | sum of square deviations: 331974592474.9991
[2025-11-27 05:20:04] 2025-11-27 04:14:08,088 | INFO     | sum of deviations: 597172677346.7825
[2025-11-27 05:20:04] 2025-11-27 04:14:08,089 | INFO     | mean x: 1764185604.0009775
[2025-11-27 05:20:04] 2025-11-27 04:14:08,089 | INFO     | mean y: 2300964.2170087975
[2025-11-27 05:20:04] 2025-11-27 04:14:08,089 | INFO     | intersect: -3171205274.990906
[2025-11-27 05:20:04] 2025-11-27 04:14:08,090 | INFO     | chi2: 1.9589398017598616
[2025-11-27 05:20:04] 2025-11-27 04:14:08,090 | INFO     | current chi2=1.9589398017598616 (change=0.0724650932264402 %)
[2025-11-27 05:20:04] 2025-11-27 04:14:08,090 | INFO     | left removable region: 20
[2025-11-27 05:20:04] 2025-11-27 04:14:08,092 | INFO     | sum of square deviations: 311947197494.499
[2025-11-27 05:20:04] 2025-11-27 04:14:08,112 | INFO     | sum of deviations: 774145048680.8464
[2025-11-27 05:20:04] 2025-11-27 04:14:08,113 | INFO     | mean x: 1764185573.500998
[2025-11-27 05:20:04] 2025-11-27 04:14:08,113 | INFO     | mean y: 2306892.6536926148
[2025-11-27 05:20:04] 2025-11-27 04:14:08,113 | INFO     | intersect: -4375791508.772277
[2025-11-27 05:20:04] 2025-11-27 04:14:08,114 | INFO     | chi2: 0.10236826415213253
[2025-11-27 05:20:04] 2025-11-27 04:14:08,115 | INFO     | current memory leak: 2.48 B/s (using 1002 data points, chi2=0.10)
[2025-11-27 05:20:04] 2025-11-27 04:14:08,116 | INFO     | could have reported an average CPU frequency of 2599 MHz (38 samples)
[2025-11-27 05:20:04] 2025-11-27 04:14:08,116 | INFO     | ..............................
[2025-11-27 05:20:04] 2025-11-27 04:14:08,116 | INFO     | . Timing measurements:
[2025-11-27 05:20:04] 2025-11-27 04:14:08,116 | INFO     | . get job = 0 s
[2025-11-27 05:20:04] 2025-11-27 04:14:08,116 | INFO     | . initial setup = 1 s
[2025-11-27 05:20:04] 2025-11-27 04:14:08,116 | INFO     | . payload setup = 6 s
[2025-11-27 05:20:04] 2025-11-27 04:14:08,117 | INFO     | . stage-in = 0 s
[2025-11-27 05:20:04] 2025-11-27 04:14:08,117 | INFO     | . payload execution = 63015 s
[2025-11-27 05:20:04] 2025-11-27 04:14:08,117 | INFO     | . stage-out = 2 s
[2025-11-27 05:20:04] 2025-11-27 04:14:08,117 | INFO     | . log creation = 0 s
[2025-11-27 05:20:04] 2025-11-27 04:14:08,117 | INFO     | ..............................
[2025-11-27 05:20:04] 2025-11-27 04:14:08,468 | INFO     | 
[2025-11-27 05:20:04] 2025-11-27 04:14:08,468 | INFO     | job summary report
[2025-11-27 05:20:04] 2025-11-27 04:14:08,468 | INFO     | --------------------------------------------------
[2025-11-27 05:20:04] 2025-11-27 04:14:08,468 | INFO     | PanDA job id: 6893857889
[2025-11-27 05:20:04] 2025-11-27 04:14:08,469 | INFO     | task id: 47523449
[2025-11-27 05:20:04] 2025-11-27 04:14:08,469 | INFO     | errors: (none)
[2025-11-27 05:20:04] 2025-11-27 04:14:08,469 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 05:20:04] 2025-11-27 04:14:08,469 | INFO     | pilot state: finished 
[2025-11-27 05:20:04] 2025-11-27 04:14:08,469 | INFO     | transexitcode: 0
[2025-11-27 05:20:04] 2025-11-27 04:14:08,469 | INFO     | exeerrorcode: 0
[2025-11-27 05:20:04] 2025-11-27 04:14:08,469 | INFO     | exeerrordiag: 
[2025-11-27 05:20:04] 2025-11-27 04:14:08,469 | INFO     | exitcode: 0
[2025-11-27 05:20:04] 2025-11-27 04:14:08,469 | INFO     | exitmsg: OK
[2025-11-27 05:20:04] 2025-11-27 04:14:08,469 | INFO     | cpuconsumptiontime: 250179 s
[2025-11-27 05:20:04] 2025-11-27 04:14:08,469 | INFO     | nevents: 1000
[2025-11-27 05:20:04] 2025-11-27 04:14:08,469 | INFO     | neventsw: 0
[2025-11-27 05:20:04] 2025-11-27 04:14:08,469 | INFO     | pid: 2626074
[2025-11-27 05:20:04] 2025-11-27 04:14:08,469 | INFO     | pgrp: 2626074
[2025-11-27 05:20:04] 2025-11-27 04:14:08,469 | INFO     | corecount: 4
[2025-11-27 05:20:04] 2025-11-27 04:14:08,470 | INFO     | event service: False
[2025-11-27 05:20:04] 2025-11-27 04:14:08,470 | INFO     | sizes: {0: 2284326, 5: 2284588, 11: 2284644, 63026: 2337769, 63030: 2346841, 63037: 2347031}
[2025-11-27 05:20:04] 2025-11-27 04:14:08,470 | INFO     | --------------------------------------------------
[2025-11-27 05:20:04] 2025-11-27 04:14:08,470 | INFO     | 
[2025-11-27 05:20:04] 2025-11-27 04:14:08,470 | INFO     | executing command: ls -lF /scratch/boinc/var/slot56/slots/0
[2025-11-27 05:20:04] 2025-11-27 04:14:08,491 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 05:20:04] 2025-11-27 04:14:08,491 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 05:20:04] 2025-11-27 04:14:08,492 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 05:20:04] 2025-11-27 04:14:08,492 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 05:20:04] 2025-11-27 04:14:08,492 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 05:20:04] 2025-11-27 04:14:08,492 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 05:20:04] 2025-11-27 04:14:08,492 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 05:20:04] 2025-11-27 04:14:08,492 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 05:20:04] 2025-11-27 04:14:08,492 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 05:20:04] 2025-11-27 04:14:08,492 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 05:20:04] 2025-11-27 04:14:08,492 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 05:20:04] 2025-11-27 04:14:08,494 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 05:20:04] 2025-11-27 04:14:08,494 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 05:20:04] 2025-11-27 04:14:08,494 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 05:20:04] 2025-11-27 04:14:08,494 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 05:20:04] 2025-11-27 04:14:08,494 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 05:20:04] 2025-11-27 04:14:08,494 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 05:20:04] 2025-11-27 04:14:08,494 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 05:20:04] 2025-11-27 04:14:08,494 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 05:20:04] 2025-11-27 04:14:08,494 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 05:20:04] 2025-11-27 04:14:08,495 | INFO     | job 6893857889 has completed (purged errors)
[2025-11-27 05:20:04] 2025-11-27 04:14:08,495 | INFO     | overall cleanup function is called
[2025-11-27 05:20:04] 2025-11-27 04:14:09,508 | INFO     | --- collectZombieJob: --- 10, [2626074]
[2025-11-27 05:20:04] 2025-11-27 04:14:09,509 | INFO     | zombie collector waiting for pid 2626074
[2025-11-27 05:20:04] 2025-11-27 04:14:09,509 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 05:20:04] 2025-11-27 04:14:09,509 | INFO     | collected zombie processes
[2025-11-27 05:20:04] 2025-11-27 04:14:09,509 | INFO     | will attempt to kill all subprocesses of pid=2626074
[2025-11-27 05:20:04] 2025-11-27 04:14:09,916 | INFO     | process IDs to be killed: [2626074] (in reverse order)
[2025-11-27 05:20:04] 2025-11-27 04:14:10,028 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 05:20:04] 2025-11-27 04:14:10,028 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 05:20:04] 2025-11-27 04:14:10,041 | INFO     | did not find any defunct processes belonging to 2626074
[2025-11-27 05:20:04] 2025-11-27 04:14:10,054 | INFO     | did not find any defunct processes belonging to 2626074
[2025-11-27 05:20:04] 2025-11-27 04:14:10,056 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 05:20:04] 2025-11-27 04:14:10,056 | INFO     | ready for new job
[2025-11-27 05:20:04] 2025-11-27 04:14:10,056 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 05:20:04] 2025-11-27 04:14:10,061 | INFO     | ***************************************
[2025-11-27 05:20:04] 2025-11-27 04:14:10,062 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 05:20:04] 2025-11-27 04:14:10,062 | INFO     | ***************************************
[2025-11-27 05:20:04] 2025-11-27 04:14:10,062 | INFO     | 
[2025-11-27 05:20:04] 2025-11-27 04:14:10,066 | INFO     | architecture information:
[2025-11-27 05:20:04] 2025-11-27 04:14:10,067 | INFO     | executing command: cat /etc/os-release
[2025-11-27 05:20:04] 2025-11-27 04:14:10,080 | INFO     | cat /etc/os-release:
[2025-11-27 05:20:04] NAME="CentOS Linux"
[2025-11-27 05:20:04] VERSION="7 (Core)"
[2025-11-27 05:20:04] ID="centos"
[2025-11-27 05:20:04] ID_LIKE="rhel fedora"
[2025-11-27 05:20:04] VERSION_ID="7"
[2025-11-27 05:20:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 05:20:04] ANSI_COLOR="0;31"
[2025-11-27 05:20:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 05:20:04] HOME_URL="https://www.centos.org/"
[2025-11-27 05:20:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 05:20:04] 
[2025-11-27 05:20:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 05:20:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 05:20:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 05:20:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 05:20:04] 
[2025-11-27 05:20:04] 2025-11-27 04:14:10,081 | INFO     | ***************************************
[2025-11-27 05:20:04] 2025-11-27 04:14:10,584 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/0
[2025-11-27 05:20:04] 2025-11-27 04:14:10,599 | INFO     | sufficient remaining disk space (670461591552 B)
[2025-11-27 05:20:04] 2025-11-27 04:14:10,599 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 05:20:04] 2025-11-27 04:14:10,600 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 05:20:04] 2025-11-27 04:14:10,600 | INFO     | update_server=False
[2025-11-27 05:20:04] 2025-11-27 04:14:10,600 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 05:20:04] 2025-11-27 04:14:10,896 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 05:20:04] 2025-11-27 04:14:10,954 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 05:20:04] 2025-11-27 04:14:10,954 | INFO     | aborting loop
[2025-11-27 05:20:04] 2025-11-27 04:14:10,989 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 05:20:04] 2025-11-27 04:14:11,098 | INFO     | all job control threads have been joined
[2025-11-27 05:20:04] 2025-11-27 04:14:11,229 | INFO     | all data control threads have been joined
[2025-11-27 05:20:04] 2025-11-27 04:14:11,602 | INFO     | [job] retrieve thread has finished
[2025-11-27 05:20:04] 2025-11-27 04:14:11,700 | INFO     | all payload control threads have been joined
[2025-11-27 05:20:04] 2025-11-27 04:14:11,744 | INFO     | [payload] failed_post thread has finished
[2025-11-27 05:20:04] 2025-11-27 04:14:11,887 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 05:20:04] 2025-11-27 04:14:11,960 | INFO     | [job] job monitor thread has finished
[2025-11-27 05:20:04] 2025-11-27 04:14:11,991 | INFO     | [payload] validate_post thread has finished
[2025-11-27 05:20:04] 2025-11-27 04:14:12,103 | INFO     | [job] control thread has finished
[2025-11-27 05:20:04] 2025-11-27 04:14:12,123 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 05:20:04] 2025-11-27 04:14:12,235 | INFO     | [data] control thread has finished
[2025-11-27 05:20:04] 2025-11-27 04:14:12,452 | INFO     | [data] copytool_in thread has finished
[2025-11-27 05:20:04] 2025-11-27 04:14:12,461 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 05:20:04] 2025-11-27 04:14:12,705 | INFO     | [payload] control thread has finished
[2025-11-27 05:20:04] 2025-11-27 04:14:12,756 | INFO     | [job] validate thread has finished
[2025-11-27 05:20:04] 2025-11-27 04:14:12,766 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 05:20:04] 2025-11-27 04:14:12,901 | INFO     | [data] copytool_out thread has finished
[2025-11-27 05:20:04] 2025-11-27 04:14:13,227 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 05:20:04] 2025-11-27 04:14:14,233 | INFO     | [job] queue monitor thread has finished
[2025-11-27 05:20:04] 2025-11-27 04:14:14,995 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 05:20:04] 2025-11-27 04:14:40,355 | INFO     | PID=2619161 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-27 05:20:04] 2025-11-27 04:14:40,355 | INFO     | .. there are 3 such processes running
[2025-11-27 05:20:04] 2025-11-27 04:14:40,355 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 05:20:04] 2025-11-27 04:14:40,355 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 05:20:04] 2025-11-27 04:14:40,355 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 05:20:04] 2025-11-27 04:14:56,843 | INFO     | [monitor] cgroup control has ended
[2025-11-27 05:20:04] 2025-11-27 04:14:58,322 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23151215736640)>', '<ExcThread(monitor, started 23150974691072)>']
[2025-11-27 05:20:04] 2025-11-27 04:14:58,427 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 05:20:04] 2025-11-27 04:14:58,427 | INFO     | [monitor] control thread has ended
[2025-11-27 05:20:04] 2025-11-27 04:15:03,337 | INFO     | all workflow threads have been joined
[2025-11-27 05:20:04] 2025-11-27 04:15:03,337 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 05:20:04] 2025-11-27 04:15:03,337 | INFO     | traces error code: 0
[2025-11-27 05:20:04] 2025-11-27 04:15:03,338 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 05:20:04] 2025-11-27 04:15:03,536 [wrapper] ==== pilot stdout END ====
[2025-11-27 05:20:04] 2025-11-27 04:15:03,538 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 05:20:04] 2025-11-27 04:15:03,541 [wrapper] pilotpid: 2619161
[2025-11-27 05:20:04] 2025-11-27 04:15:03,543 [wrapper] Pilot exit status: 0
[2025-11-27 05:20:04] 2025-11-27 04:15:03,553 [wrapper] pandaids: 6893857889
[2025-11-27 05:20:04] 2025-11-27 04:15:03,629 [wrapper] cleanup supervisor_pilot 3413633 2619162
[2025-11-27 05:20:04] 2025-11-27 04:15:03,632 [wrapper] Test setup, not cleaning
[2025-11-27 05:20:04] 2025-11-27 04:15:03,635 [wrapper] apfmon messages muted
[2025-11-27 05:20:04] 2025-11-27 04:15:03,637 [wrapper] ==== wrapper stdout END ====
[2025-11-27 05:20:04] 2025-11-27 04:15:03,640 [wrapper] ==== wrapper stderr END ====
[2025-11-27 05:20:04]  *** Error codes and diagnostics ***
[2025-11-27 05:20:04]     "exeErrorCode": 0,
[2025-11-27 05:20:04]     "exeErrorDiag": "",
[2025-11-27 05:20:04]     "pilotErrorCode": 0,
[2025-11-27 05:20:04]     "pilotErrorDiag": "",
[2025-11-27 05:20:04]  *** Listing of results directory ***
[2025-11-27 05:20:04] total 1329568
[2025-11-27 05:20:04] -rw-r--r-- 1 boinc boinc    576529 Nov 20 14:12 pilot3.tar.gz
[2025-11-27 05:20:04] -rwx------ 1 boinc boinc     36292 Nov 20 14:16 runpilot2-wrapper.sh
[2025-11-27 05:20:04] -rw-r--r-- 1 boinc boinc      5112 Nov 20 14:16 queuedata.json
[2025-11-27 05:20:04] -rw-r--r-- 1 boinc boinc       100 Nov 26 11:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 05:20:04] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 11:42 run_atlas
[2025-11-27 05:20:04] -rw-r--r-- 1 boinc boinc       105 Nov 26 11:42 job.xml
[2025-11-27 05:20:04] -rw-r--r-- 1 boinc boinc      6634 Nov 26 11:43 init_data.xml
[2025-11-27 05:20:04] -rw-r--r-- 2 boinc boinc 410063261 Nov 26 11:43 EVNT.47493127._000503.pool.root.1
[2025-11-27 05:20:04] -rw-r--r-- 2 boinc boinc     15847 Nov 26 11:43 start_atlas.sh
[2025-11-27 05:20:04] drwxrwx--x 2 boinc boinc      4096 Nov 26 11:43 shared
[2025-11-27 05:20:04] -rw-r--r-- 2 boinc boinc    590096 Nov 26 11:43 input.tar.gz
[2025-11-27 05:20:04] -rw-r--r-- 1 boinc boinc         0 Nov 26 11:43 boinc_lockfile
[2025-11-27 05:20:04] -rw-r--r-- 1 boinc boinc      2786 Nov 26 11:43 pandaJob.out
[2025-11-27 05:20:04] -rw------- 1 boinc boinc    991827 Nov 26 11:43 agis_schedconf.cvmfs.json
[2025-11-27 05:20:04] drwx------ 5 boinc boinc      4096 Nov 26 11:43 pilot3
[2025-11-27 05:20:04] -rw-r--r-- 1 boinc boinc       532 Nov 27 05:08 boinc_task_state.xml
[2025-11-27 05:20:04] -rw------- 1 boinc boinc 926338912 Nov 27 05:13 HITS.47523449._005022.pool.root.1
[2025-11-27 05:20:04] -rw------- 1 boinc boinc      1046 Nov 27 05:13 memory_monitor_summary.json
[2025-11-27 05:20:04] -rw------- 1 boinc boinc   1516240 Nov 27 05:13 agis_ddmendpoints.agis.ALL.json
[2025-11-27 05:20:04] -rw------- 1 boinc boinc   1764572 Nov 27 05:14 log.47523449._005022.job.log.tgz.1
[2025-11-27 05:20:04] -rw------- 1 boinc boinc        95 Nov 27 05:14 pilot_heartbeat.json
[2025-11-27 05:20:04] -rw------- 1 boinc boinc      8627 Nov 27 05:14 heartbeat.json
[2025-11-27 05:20:04] -rw------- 1 boinc boinc      4833 Nov 27 05:15 pilotlog.txt
[2025-11-27 05:20:04] -rw------- 1 boinc boinc   8814189 Nov 27 05:15 log.47523449._005022.job.log.1
[2025-11-27 05:20:04] -rw------- 1 boinc boinc       353 Nov 27 05:15 output.list
[2025-11-27 05:20:04] -rw-r--r-- 1 boinc boinc       620 Nov 27 05:15 runtime_log
[2025-11-27 05:20:04] -rw------- 1 boinc boinc  10598400 Nov 27 05:15 result.tar.gz
[2025-11-27 05:20:04] -rw-r--r-- 1 boinc boinc      9206 Nov 27 05:15 runtime_log.err
[2025-11-27 05:20:04] -rw------- 1 boinc boinc       670 Nov 27 05:15 KvaMDmKhJg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmQhGKDmvxwnum.diag
[2025-11-27 05:20:04] -rw-r--r-- 1 boinc boinc        28 Nov 27 05:20 wrapper_checkpoint.txt
[2025-11-27 05:20:04] -rw-r--r-- 1 boinc boinc      8192 Nov 27 05:20 boinc_mmap_file
[2025-11-27 05:20:04] -rw-r--r-- 1 boinc boinc     21096 Nov 27 05:20 stderr.txt
[2025-11-27 05:20:04] HITS file was successfully produced:
[2025-11-27 05:20:04] -rw------- 1 boinc boinc 926338912 Nov 27 05:13 shared/HITS.pool.root.1
[2025-11-27 05:20:04]  *** Contents of shared directory: ***
[2025-11-27 05:20:04] total 1316040
[2025-11-27 05:20:04] -rw-r--r-- 2 boinc boinc 410063261 Nov 26 11:43 ATLAS.root_0
[2025-11-27 05:20:04] -rw-r--r-- 2 boinc boinc     15847 Nov 26 11:43 start_atlas.sh
[2025-11-27 05:20:04] -rw-r--r-- 2 boinc boinc    590096 Nov 26 11:43 input.tar.gz
[2025-11-27 05:20:04] -rw------- 1 boinc boinc 926338912 Nov 27 05:13 HITS.pool.root.1
[2025-11-27 05:20:04] -rw------- 1 boinc boinc  10598400 Nov 27 05:15 result.tar.gz
05:20:06 (2615405): run_atlas exited; CPU time 252637.214670
05:20:06 (2615405): called boinc_finish(0)

</stderr_txt>
]]>

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