Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:20:58 (1675775): wrapper (7.7.26015): starting
05:20:58 (1675775): wrapper: running run_atlas (--nthreads 4)
[2025-11-26 05:20:58] Arguments: --nthreads 4
[2025-11-26 05:20:58] Threads: 4
[2025-11-26 05:20:58] Checking for CVMFS
[2025-11-26 05:20:58] No cvmfs_config command found, will try listing directly
[2025-11-26 05:20:58] CVMFS is ok
[2025-11-26 05:20:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-26 05:20:58] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-26 05:20:58] Further information can be found at the LHC@home message board.
[2025-11-26 05:20:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-26 05:20:58] Checking for apptainer binary...
[2025-11-26 05:20:58] which: no apptainer in ((null))
[2025-11-26 05:20:58] apptainer is not installed, using version from CVMFS
[2025-11-26 05:20:58] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-26 05:20:58] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut09.grid.cesnet.cz
[2025-11-26 05:20:58] apptainer works
[2025-11-26 05:20:58] Set ATHENA_PROC_NUMBER=4
[2025-11-26 05:20:58] Set ATHENA_CORE_NUMBER=4
[2025-11-26 05:20:58] Starting ATLAS job with PandaID=6893857691
[2025-11-26 05:20:58] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 22:30:33]  *** The last 200 lines of the pilot log: ***
[2025-11-26 22:30:33] 2025-11-26 21:29:03,619 | INFO     | monitor loop #4417: job 0:6893857691 is in state 'finished'
[2025-11-26 22:30:33] 2025-11-26 21:29:03,619 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-26 22:30:33] 2025-11-26 21:29:04,006 | INFO     | time since job start (61674s) is within the limit (172800.0s)
[2025-11-26 22:30:33] 2025-11-26 21:29:04,896 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 22:30:33] 2025-11-26 21:29:04,907 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2549.5435625
[2025-11-26 22:30:33] 2025-11-26 21:29:04,921 | INFO     | using path: /scratch/boinc/var/slot60/slots/0/PanDA_Pilot-6893857691/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 22:30:33] 2025-11-26 21:29:04,922 | INFO     | extracted standard info from prmon json
[2025-11-26 22:30:33] 2025-11-26 21:29:04,922 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 22:30:33] 2025-11-26 21:29:04,922 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 22:30:33] 2025-11-26 21:29:04,943 | INFO     | fitting pss+swap vs Time
[2025-11-26 22:30:33] 2025-11-26 21:29:04,945 | INFO     | sum of square deviations: 320428666686.9753
[2025-11-26 22:30:33] 2025-11-26 21:29:04,971 | INFO     | sum of deviations: 754884344629.4304
[2025-11-26 22:30:33] 2025-11-26 21:29:04,971 | INFO     | mean x: 1764161703.0049455
[2025-11-26 22:30:33] 2025-11-26 21:29:04,971 | INFO     | mean y: 2297242.1137487637
[2025-11-26 22:30:33] 2025-11-26 21:29:04,971 | INFO     | intersect: -4153816705.999997
[2025-11-26 22:30:33] 2025-11-26 21:29:04,973 | INFO     | chi2: 5.127827601385813
[2025-11-26 22:30:33] 2025-11-26 21:29:04,975 | INFO     | sum of square deviations: 315698002769.4752
[2025-11-26 22:30:33] 2025-11-26 21:29:04,999 | INFO     | sum of deviations: 1033671384477.6896
[2025-11-26 22:30:33] 2025-11-26 21:29:04,999 | INFO     | mean x: 1764161550.50497
[2025-11-26 22:30:33] 2025-11-26 21:29:05,000 | INFO     | mean y: 2306230.162027833
[2025-11-26 22:30:33] 2025-11-26 21:29:05,000 | INFO     | intersect: -5773984073.721706
[2025-11-26 22:30:33] 2025-11-26 21:29:05,001 | INFO     | chi2: 1.8662615829587854
[2025-11-26 22:30:33] 2025-11-26 21:29:05,001 | INFO     | current chi2=1.8662615829587854 (change=63.60521983121231 %)
[2025-11-26 22:30:33] 2025-11-26 21:29:05,003 | INFO     | sum of square deviations: 311014130426.9751
[2025-11-26 22:30:33] 2025-11-26 21:29:05,027 | INFO     | sum of deviations: 1045910175599.8931
[2025-11-26 22:30:33] 2025-11-26 21:29:05,028 | INFO     | mean x: 1764161398.004995
[2025-11-26 22:30:33] 2025-11-26 21:29:05,028 | INFO     | mean y: 2306626.221778222
[2025-11-26 22:30:33] 2025-11-26 21:29:05,028 | INFO     | intersect: -5930396029.573445
[2025-11-26 22:30:33] 2025-11-26 21:29:05,029 | INFO     | chi2: 1.8061572456133044
[2025-11-26 22:30:33] 2025-11-26 21:29:05,030 | INFO     | current chi2=1.8061572456133044 (change=3.2205741089194566 %)
[2025-11-26 22:30:33] 2025-11-26 21:29:05,030 | INFO     | right removable region: 1000
[2025-11-26 22:30:33] 2025-11-26 21:29:05,031 | INFO     | sum of square deviations: 315697999719.4752
[2025-11-26 22:30:33] 2025-11-26 21:29:05,055 | INFO     | sum of deviations: 577363533765.9811
[2025-11-26 22:30:33] 2025-11-26 21:29:05,056 | INFO     | mean x: 1764161855.50497
[2025-11-26 22:30:33] 2025-11-26 21:29:05,056 | INFO     | mean y: 2302955.003976143
[2025-11-26 22:30:33] 2025-11-26 21:29:05,056 | INFO     | intersect: -3224080246.456217
[2025-11-26 22:30:33] 2025-11-26 21:29:05,057 | INFO     | chi2: 3.445741623742527
[2025-11-26 22:30:33] 2025-11-26 21:29:05,057 | INFO     | current chi2=3.445741623742527 (change=32.80309145316618 %)
[2025-11-26 22:30:33] 2025-11-26 21:29:05,059 | INFO     | sum of square deviations: 311014124326.97504
[2025-11-26 22:30:33] 2025-11-26 21:29:05,083 | INFO     | sum of deviations: 562223263654.6272
[2025-11-26 22:30:33] 2025-11-26 21:29:05,083 | INFO     | mean x: 1764162008.004995
[2025-11-26 22:30:33] 2025-11-26 21:29:05,083 | INFO     | mean y: 2303447.4745254745
[2025-11-26 22:30:33] 2025-11-26 21:29:05,083 | INFO     | intersect: -3186789407.721064
[2025-11-26 22:30:33] 2025-11-26 21:29:05,085 | INFO     | chi2: 3.44390019682032
[2025-11-26 22:30:33] 2025-11-26 21:29:05,085 | INFO     | current chi2=3.44390019682032 (change=0.05344065583788875 %)
[2025-11-26 22:30:33] 2025-11-26 21:29:05,085 | INFO     | left removable region: 20
[2025-11-26 22:30:33] 2025-11-26 21:29:05,087 | INFO     | sum of square deviations: 291847569916.97504
[2025-11-26 22:30:33] 2025-11-26 21:29:05,110 | INFO     | sum of deviations: 837597066037.9125
[2025-11-26 22:30:33] 2025-11-26 21:29:05,110 | INFO     | mean x: 1764161977.5051022
[2025-11-26 22:30:33] 2025-11-26 21:29:05,110 | INFO     | mean y: 2313332.717346939
[2025-11-26 22:30:33] 2025-11-26 21:29:05,110 | INFO     | intersect: -5060798540.354887
[2025-11-26 22:30:33] 2025-11-26 21:29:05,112 | INFO     | chi2: 0.09919798968838087
[2025-11-26 22:30:33] 2025-11-26 21:29:05,112 | INFO     | current memory leak: 2.87 B/s (using 980 data points, chi2=0.10)
[2025-11-26 22:30:33] 2025-11-26 21:29:05,114 | INFO     | could have reported an average CPU frequency of 2629 MHz (37 samples)
[2025-11-26 22:30:33] 2025-11-26 21:29:05,115 | INFO     | ..............................
[2025-11-26 22:30:33] 2025-11-26 21:29:05,115 | INFO     | . Timing measurements:
[2025-11-26 22:30:33] 2025-11-26 21:29:05,115 | INFO     | . get job = 0 s
[2025-11-26 22:30:33] 2025-11-26 21:29:05,115 | INFO     | . initial setup = 1 s
[2025-11-26 22:30:33] 2025-11-26 21:29:05,115 | INFO     | . payload setup = 6 s
[2025-11-26 22:30:33] 2025-11-26 21:29:05,115 | INFO     | . stage-in = 0 s
[2025-11-26 22:30:33] 2025-11-26 21:29:05,115 | INFO     | . payload execution = 61637 s
[2025-11-26 22:30:33] 2025-11-26 21:29:05,115 | INFO     | . stage-out = 2 s
[2025-11-26 22:30:33] 2025-11-26 21:29:05,116 | INFO     | . log creation = 0 s
[2025-11-26 22:30:33] 2025-11-26 21:29:05,116 | INFO     | ..............................
[2025-11-26 22:30:33] 2025-11-26 21:29:05,558 | INFO     | 
[2025-11-26 22:30:33] 2025-11-26 21:29:05,558 | INFO     | job summary report
[2025-11-26 22:30:33] 2025-11-26 21:29:05,558 | INFO     | --------------------------------------------------
[2025-11-26 22:30:33] 2025-11-26 21:29:05,558 | INFO     | PanDA job id: 6893857691
[2025-11-26 22:30:33] 2025-11-26 21:29:05,558 | INFO     | task id: 47523449
[2025-11-26 22:30:33] 2025-11-26 21:29:05,558 | INFO     | errors: (none)
[2025-11-26 22:30:33] 2025-11-26 21:29:05,558 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 22:30:33] 2025-11-26 21:29:05,558 | INFO     | pilot state: finished 
[2025-11-26 22:30:33] 2025-11-26 21:29:05,559 | INFO     | transexitcode: 0
[2025-11-26 22:30:33] 2025-11-26 21:29:05,559 | INFO     | exeerrorcode: 0
[2025-11-26 22:30:33] 2025-11-26 21:29:05,559 | INFO     | exeerrordiag: 
[2025-11-26 22:30:33] 2025-11-26 21:29:05,559 | INFO     | exitcode: 0
[2025-11-26 22:30:33] 2025-11-26 21:29:05,559 | INFO     | exitmsg: OK
[2025-11-26 22:30:33] 2025-11-26 21:29:05,559 | INFO     | cpuconsumptiontime: 244395 s
[2025-11-26 22:30:33] 2025-11-26 21:29:05,559 | INFO     | nevents: 1000
[2025-11-26 22:30:33] 2025-11-26 21:29:05,559 | INFO     | neventsw: 0
[2025-11-26 22:30:33] 2025-11-26 21:29:05,559 | INFO     | pid: 1686822
[2025-11-26 22:30:33] 2025-11-26 21:29:05,559 | INFO     | pgrp: 1686822
[2025-11-26 22:30:33] 2025-11-26 21:29:05,559 | INFO     | corecount: 4
[2025-11-26 22:30:33] 2025-11-26 21:29:05,559 | INFO     | event service: False
[2025-11-26 22:30:33] 2025-11-26 21:29:05,560 | INFO     | sizes: {0: 2284104, 1: 2284303, 6: 2284565, 12: 2284593, 61647: 2337330, 61651: 2346346, 61652: 2346530, 61659: 2346776}
[2025-11-26 22:30:33] 2025-11-26 21:29:05,560 | INFO     | --------------------------------------------------
[2025-11-26 22:30:33] 2025-11-26 21:29:05,560 | INFO     | 
[2025-11-26 22:30:33] 2025-11-26 21:29:05,560 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/0
[2025-11-26 22:30:33] 2025-11-26 21:29:05,582 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 22:30:33] 2025-11-26 21:29:05,583 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 22:30:33] 2025-11-26 21:29:05,583 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 22:30:33] 2025-11-26 21:29:05,583 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 22:30:33] 2025-11-26 21:29:05,583 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 22:30:33] 2025-11-26 21:29:05,583 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 22:30:33] 2025-11-26 21:29:05,583 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 22:30:33] 2025-11-26 21:29:05,583 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 22:30:33] 2025-11-26 21:29:05,583 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 22:30:33] 2025-11-26 21:29:05,584 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 22:30:33] 2025-11-26 21:29:05,584 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 22:30:33] 2025-11-26 21:29:05,584 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 22:30:33] 2025-11-26 21:29:05,584 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 22:30:33] 2025-11-26 21:29:05,584 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 22:30:33] 2025-11-26 21:29:05,584 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 22:30:33] 2025-11-26 21:29:05,584 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 22:30:33] 2025-11-26 21:29:05,584 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 22:30:33] 2025-11-26 21:29:05,584 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 22:30:33] 2025-11-26 21:29:05,584 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 22:30:33] 2025-11-26 21:29:05,584 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 22:30:33] 2025-11-26 21:29:05,585 | INFO     | job 6893857691 has completed (purged errors)
[2025-11-26 22:30:33] 2025-11-26 21:29:05,585 | INFO     | overall cleanup function is called
[2025-11-26 22:30:33] 2025-11-26 21:29:06,598 | INFO     | --- collectZombieJob: --- 10, [1686822]
[2025-11-26 22:30:33] 2025-11-26 21:29:06,598 | INFO     | zombie collector waiting for pid 1686822
[2025-11-26 22:30:33] 2025-11-26 21:29:06,598 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 22:30:33] 2025-11-26 21:29:06,598 | INFO     | collected zombie processes
[2025-11-26 22:30:33] 2025-11-26 21:29:06,598 | INFO     | will attempt to kill all subprocesses of pid=1686822
[2025-11-26 22:30:33] 2025-11-26 21:29:06,982 | INFO     | process IDs to be killed: [1686822] (in reverse order)
[2025-11-26 22:30:33] 2025-11-26 21:29:07,098 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 22:30:33] 2025-11-26 21:29:07,099 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 22:30:33] 2025-11-26 21:29:07,112 | INFO     | did not find any defunct processes belonging to 1686822
[2025-11-26 22:30:33] 2025-11-26 21:29:07,126 | INFO     | did not find any defunct processes belonging to 1686822
[2025-11-26 22:30:33] 2025-11-26 21:29:07,128 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 22:30:33] 2025-11-26 21:29:07,128 | INFO     | ready for new job
[2025-11-26 22:30:33] 2025-11-26 21:29:07,128 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 22:30:33] 2025-11-26 21:29:07,134 | INFO     | ***************************************
[2025-11-26 22:30:33] 2025-11-26 21:29:07,134 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 22:30:33] 2025-11-26 21:29:07,134 | INFO     | ***************************************
[2025-11-26 22:30:33] 2025-11-26 21:29:07,134 | INFO     | 
[2025-11-26 22:30:33] 2025-11-26 21:29:07,138 | INFO     | architecture information:
[2025-11-26 22:30:33] 2025-11-26 21:29:07,139 | INFO     | executing command: cat /etc/os-release
[2025-11-26 22:30:33] 2025-11-26 21:29:07,157 | INFO     | cat /etc/os-release:
[2025-11-26 22:30:33] NAME="CentOS Linux"
[2025-11-26 22:30:33] VERSION="7 (Core)"
[2025-11-26 22:30:33] ID="centos"
[2025-11-26 22:30:33] ID_LIKE="rhel fedora"
[2025-11-26 22:30:33] VERSION_ID="7"
[2025-11-26 22:30:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 22:30:33] ANSI_COLOR="0;31"
[2025-11-26 22:30:33] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 22:30:33] HOME_URL="https://www.centos.org/"
[2025-11-26 22:30:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 22:30:33] 
[2025-11-26 22:30:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 22:30:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 22:30:33] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 22:30:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 22:30:33] 
[2025-11-26 22:30:33] 2025-11-26 21:29:07,157 | INFO     | ***************************************
[2025-11-26 22:30:33] 2025-11-26 21:29:07,660 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/0
[2025-11-26 22:30:33] 2025-11-26 21:29:07,679 | INFO     | sufficient remaining disk space (672752730112 B)
[2025-11-26 22:30:33] 2025-11-26 21:29:07,680 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 22:30:33] 2025-11-26 21:29:07,680 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 22:30:33] 2025-11-26 21:29:07,680 | INFO     | update_server=False
[2025-11-26 22:30:33] 2025-11-26 21:29:07,680 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 22:30:33] 2025-11-26 21:29:07,680 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 22:30:33] 2025-11-26 21:29:07,681 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 22:30:33] 2025-11-26 21:29:07,681 | INFO     | aborting loop
[2025-11-26 22:30:33] 2025-11-26 21:29:08,512 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 22:30:33] 2025-11-26 21:29:08,586 | INFO     | all data control threads have been joined
[2025-11-26 22:30:33] 2025-11-26 21:29:08,592 | INFO     | all payload control threads have been joined
[2025-11-26 22:30:33] 2025-11-26 21:29:08,686 | INFO     | [job] retrieve thread has finished
[2025-11-26 22:30:33] 2025-11-26 21:29:08,687 | INFO     | [job] job monitor thread has finished
[2025-11-26 22:30:33] 2025-11-26 21:29:08,805 | INFO     | [payload] validate_post thread has finished
[2025-11-26 22:30:33] 2025-11-26 21:29:08,966 | INFO     | all job control threads have been joined
[2025-11-26 22:30:33] 2025-11-26 21:29:09,001 | INFO     | [data] copytool_in thread has finished
[2025-11-26 22:30:33] 2025-11-26 21:29:09,112 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 22:30:33] 2025-11-26 21:29:09,229 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 22:30:33] 2025-11-26 21:29:09,322 | INFO     | [payload] failed_post thread has finished
[2025-11-26 22:30:33] 2025-11-26 21:29:09,448 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 22:30:33] 2025-11-26 21:29:09,592 | INFO     | [data] control thread has finished
[2025-11-26 22:30:33] 2025-11-26 21:29:09,597 | INFO     | [payload] control thread has finished
[2025-11-26 22:30:33] 2025-11-26 21:29:09,687 | INFO     | [data] copytool_out thread has finished
[2025-11-26 22:30:33] 2025-11-26 21:29:09,864 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 22:30:33] 2025-11-26 21:29:09,971 | INFO     | [job] control thread has finished
[2025-11-26 22:30:33] 2025-11-26 21:29:09,996 | INFO     | [job] validate thread has finished
[2025-11-26 22:30:33] 2025-11-26 21:29:10,247 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 22:30:33] 2025-11-26 21:29:11,252 | INFO     | [job] queue monitor thread has finished
[2025-11-26 22:30:33] 2025-11-26 21:29:12,518 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 22:30:33] 2025-11-26 21:29:37,601 | INFO     | PID=1679605 has CPU usage=4.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-26 22:30:33] 2025-11-26 21:29:37,601 | INFO     | .. there are 3 such processes running
[2025-11-26 22:30:33] 2025-11-26 21:29:37,602 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 22:30:33] 2025-11-26 21:29:37,602 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 22:30:33] 2025-11-26 21:29:37,602 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 22:30:33] 2025-11-26 21:29:49,390 | INFO     | [monitor] cgroup control has ended
[2025-11-26 22:30:33] 2025-11-26 21:29:50,602 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23401920206656)>', '<ExcThread(monitor, started 23401685030656)>']
[2025-11-26 22:30:33] 2025-11-26 21:29:50,661 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 22:30:33] 2025-11-26 21:29:50,662 | INFO     | [monitor] control thread has ended
[2025-11-26 22:30:33] 2025-11-26 21:29:55,627 | INFO     | all workflow threads have been joined
[2025-11-26 22:30:33] 2025-11-26 21:29:55,627 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 22:30:33] 2025-11-26 21:29:55,627 | INFO     | traces error code: 0
[2025-11-26 22:30:33] 2025-11-26 21:29:55,628 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 22:30:33] 2025-11-26 21:29:55,836 [wrapper] ==== pilot stdout END ====
[2025-11-26 22:30:33] 2025-11-26 21:29:55,839 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 22:30:33] 2025-11-26 21:29:55,842 [wrapper] pilotpid: 1679605
[2025-11-26 22:30:33] 2025-11-26 21:29:55,845 [wrapper] Pilot exit status: 0
[2025-11-26 22:30:33] 2025-11-26 21:29:55,856 [wrapper] pandaids: 6893857691
[2025-11-26 22:30:33] 2025-11-26 21:29:55,936 [wrapper] cleanup supervisor_pilot 2463802 1679606
[2025-11-26 22:30:33] 2025-11-26 21:29:55,939 [wrapper] Test setup, not cleaning
[2025-11-26 22:30:33] 2025-11-26 21:29:55,942 [wrapper] apfmon messages muted
[2025-11-26 22:30:33] 2025-11-26 21:29:55,946 [wrapper] ==== wrapper stdout END ====
[2025-11-26 22:30:33] 2025-11-26 21:29:55,949 [wrapper] ==== wrapper stderr END ====
[2025-11-26 22:30:33]  *** Error codes and diagnostics ***
[2025-11-26 22:30:33]     "exeErrorCode": 0,
[2025-11-26 22:30:33]     "exeErrorDiag": "",
[2025-11-26 22:30:33]     "pilotErrorCode": 0,
[2025-11-26 22:30:33]     "pilotErrorDiag": "",
[2025-11-26 22:30:33]  *** Listing of results directory ***
[2025-11-26 22:30:33] total 1331820
[2025-11-26 22:30:33] -rw-r--r-- 1 boinc boinc    576529 Nov 20 14:01 pilot3.tar.gz
[2025-11-26 22:30:33] -rw-r--r-- 1 boinc boinc      5112 Nov 20 14:08 queuedata.json
[2025-11-26 22:30:33] -rwx------ 1 boinc boinc     36292 Nov 20 14:09 runpilot2-wrapper.sh
[2025-11-26 22:30:33] -rw-r--r-- 1 boinc boinc       100 Nov 26 05:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 22:30:33] -rwxr-xr-x 1 boinc boinc      7986 Nov 26 05:20 run_atlas
[2025-11-26 22:30:33] -rw-r--r-- 1 boinc boinc       105 Nov 26 05:20 job.xml
[2025-11-26 22:30:33] -rw-r--r-- 2 boinc boinc 413366519 Nov 26 05:20 EVNT.47493127._000500.pool.root.1
[2025-11-26 22:30:33] -rw-r--r-- 1 boinc boinc      6635 Nov 26 05:20 init_data.xml
[2025-11-26 22:30:33] -rw-r--r-- 2 boinc boinc     15847 Nov 26 05:20 start_atlas.sh
[2025-11-26 22:30:33] drwxrwx--x 2 boinc boinc      4096 Nov 26 05:20 shared
[2025-11-26 22:30:33] -rw-r--r-- 2 boinc boinc    590096 Nov 26 05:20 input.tar.gz
[2025-11-26 22:30:33] -rw-r--r-- 1 boinc boinc         0 Nov 26 05:20 boinc_lockfile
[2025-11-26 22:30:33] -rw-r--r-- 1 boinc boinc      2785 Nov 26 05:20 pandaJob.out
[2025-11-26 22:30:33] -rw------- 1 boinc boinc    991877 Nov 26 05:21 agis_schedconf.cvmfs.json
[2025-11-26 22:30:33] drwx------ 5 boinc boinc      4096 Nov 26 05:21 pilot3
[2025-11-26 22:30:33] -rw-r--r-- 1 boinc boinc       532 Nov 26 22:22 boinc_task_state.xml
[2025-11-26 22:30:33] -rw------- 1 boinc boinc 925787359 Nov 26 22:28 HITS.47523449._004992.pool.root.1
[2025-11-26 22:30:33] -rw------- 1 boinc boinc      1046 Nov 26 22:28 memory_monitor_summary.json
[2025-11-26 22:30:33] -rw------- 1 boinc boinc   1516240 Nov 26 22:28 agis_ddmendpoints.agis.ALL.json
[2025-11-26 22:30:33] -rw------- 1 boinc boinc   1738446 Nov 26 22:28 log.47523449._004992.job.log.tgz.1
[2025-11-26 22:30:33] -rw------- 1 boinc boinc      8629 Nov 26 22:29 heartbeat.json
[2025-11-26 22:30:33] -rw------- 1 boinc boinc        95 Nov 26 22:29 pilot_heartbeat.json
[2025-11-26 22:30:33] -rw------- 1 boinc boinc      4833 Nov 26 22:29 pilotlog.txt
[2025-11-26 22:30:33] -rw------- 1 boinc boinc   8617519 Nov 26 22:29 log.47523449._004992.job.log.1
[2025-11-26 22:30:33] -rw------- 1 boinc boinc       353 Nov 26 22:29 output.list
[2025-11-26 22:30:33] -rw-r--r-- 1 boinc boinc       620 Nov 26 22:29 runtime_log
[2025-11-26 22:30:33] -rw------- 1 boinc boinc  10373120 Nov 26 22:29 result.tar.gz
[2025-11-26 22:30:33] -rw-r--r-- 1 boinc boinc      9206 Nov 26 22:29 runtime_log.err
[2025-11-26 22:30:33] -rw------- 1 boinc boinc       670 Nov 26 22:29 nsRLDmQaJg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDm4gGKDmLEpphn.diag
[2025-11-26 22:30:33] -rw-r--r-- 1 boinc boinc        28 Nov 26 22:30 wrapper_checkpoint.txt
[2025-11-26 22:30:33] -rw-r--r-- 1 boinc boinc      8192 Nov 26 22:30 boinc_mmap_file
[2025-11-26 22:30:33] -rw-r--r-- 1 boinc boinc     21109 Nov 26 22:30 stderr.txt
[2025-11-26 22:30:33] HITS file was successfully produced:
[2025-11-26 22:30:33] -rw------- 1 boinc boinc 925787359 Nov 26 22:28 shared/HITS.pool.root.1
[2025-11-26 22:30:33]  *** Contents of shared directory: ***
[2025-11-26 22:30:33] total 1318508
[2025-11-26 22:30:33] -rw-r--r-- 2 boinc boinc 413366519 Nov 26 05:20 ATLAS.root_0
[2025-11-26 22:30:33] -rw-r--r-- 2 boinc boinc     15847 Nov 26 05:20 start_atlas.sh
[2025-11-26 22:30:33] -rw-r--r-- 2 boinc boinc    590096 Nov 26 05:20 input.tar.gz
[2025-11-26 22:30:33] -rw------- 1 boinc boinc 925787359 Nov 26 22:28 HITS.pool.root.1
[2025-11-26 22:30:33] -rw------- 1 boinc boinc  10373120 Nov 26 22:29 result.tar.gz
22:30:35 (1675775): run_atlas exited; CPU time 246769.564747
22:30:35 (1675775): called boinc_finish(0)

</stderr_txt>
]]>

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