Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:43:56 (3636921): wrapper (7.7.26015): starting
09:43:56 (3636921): wrapper: running run_atlas (--nthreads 4)
[2025-11-27 09:43:56] Arguments: --nthreads 4
[2025-11-27 09:43:56] Threads: 4
[2025-11-27 09:43:56] Checking for CVMFS
[2025-11-27 09:43:56] No cvmfs_config command found, will try listing directly
[2025-11-27 09:43:56] CVMFS is ok
[2025-11-27 09:43:56] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 09:43:56] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 09:43:56] Further information can be found at the LHC@home message board.
[2025-11-27 09:43:56] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 09:43:56] Checking for apptainer binary...
[2025-11-27 09:43:56] which: no apptainer in ((null))
[2025-11-27 09:43:56] apptainer is not installed, using version from CVMFS
[2025-11-27 09:43:56] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 09:43:56] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut01.grid.cesnet.cz
[2025-11-27 09:43:56] apptainer works
[2025-11-27 09:43:56] Set ATHENA_PROC_NUMBER=4
[2025-11-27 09:43:56] Set ATHENA_CORE_NUMBER=4
[2025-11-27 09:43:56] Starting ATLAS job with PandaID=6893843607
[2025-11-27 09:43:56] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-28 04:36:39]  *** The last 200 lines of the pilot log: ***
[2025-11-28 04:36:39] 2025-11-28 03:32:24,798 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-28 04:36:39] 2025-11-28 03:32:25,004 | INFO     | time since job start (67695s) is within the limit (172800.0s)
[2025-11-28 04:36:39] 2025-11-28 03:32:25,180 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-28 04:36:39] 2025-11-28 03:32:25,190 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2704.73090625
[2025-11-28 04:36:39] 2025-11-28 03:32:25,202 | INFO     | using path: /scratch/boinc/var/slot56/slots/0/PanDA_Pilot-6893843607/memory_monitor_summary.json (trf name=prmon)
[2025-11-28 04:36:39] 2025-11-28 03:32:25,203 | INFO     | extracted standard info from prmon json
[2025-11-28 04:36:39] 2025-11-28 03:32:25,203 | INFO     | extracted standard memory fields from prmon json
[2025-11-28 04:36:39] 2025-11-28 03:32:25,203 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-28 04:36:39] 2025-11-28 03:32:25,222 | INFO     | fitting pss+swap vs Time
[2025-11-28 04:36:39] 2025-11-28 03:32:25,223 | INFO     | sum of square deviations: 424076608868.9557
[2025-11-28 04:36:39] 2025-11-28 03:32:25,248 | INFO     | sum of deviations: 1036079350924.2109
[2025-11-28 04:36:39] 2025-11-28 03:32:25,248 | INFO     | mean x: 1764266902.6063063
[2025-11-28 04:36:39] 2025-11-28 03:32:25,248 | INFO     | mean y: 2286999.998198198
[2025-11-28 04:36:39] 2025-11-28 03:32:25,248 | INFO     | intersect: -4308067471.531396
[2025-11-28 04:36:39] 2025-11-28 03:32:25,250 | INFO     | chi2: 4.30062719593033
[2025-11-28 04:36:39] 2025-11-28 03:32:25,251 | INFO     | sum of square deviations: 418371616961.3989
[2025-11-28 04:36:39] 2025-11-28 03:32:25,275 | INFO     | sum of deviations: 1279360047083.95
[2025-11-28 04:36:39] 2025-11-28 03:32:25,276 | INFO     | mean x: 1764266750.1067874
[2025-11-28 04:36:39] 2025-11-28 03:32:25,276 | INFO     | mean y: 2293498.686877828
[2025-11-28 04:36:39] 2025-11-28 03:32:25,276 | INFO     | intersect: -5392748375.517321
[2025-11-28 04:36:39] 2025-11-28 03:32:25,277 | INFO     | chi2: 1.9716415142265478
[2025-11-28 04:36:39] 2025-11-28 03:32:25,277 | INFO     | current chi2=1.9716415142265478 (change=54.15455875616688 %)
[2025-11-28 04:36:39] 2025-11-28 03:32:25,279 | INFO     | sum of square deviations: 412718021366.34143
[2025-11-28 04:36:39] 2025-11-28 03:32:25,302 | INFO     | sum of deviations: 1318490702316.7808
[2025-11-28 04:36:39] 2025-11-28 03:32:25,302 | INFO     | mean x: 1764266597.6072726
[2025-11-28 04:36:39] 2025-11-28 03:32:25,302 | INFO     | mean y: 2294551.5272727273
[2025-11-28 04:36:39] 2025-11-28 03:32:25,303 | INFO     | intersect: -5633924331.409437
[2025-11-28 04:36:39] 2025-11-28 03:32:25,304 | INFO     | chi2: 1.824224776991632
[2025-11-28 04:36:39] 2025-11-28 03:32:25,304 | INFO     | current chi2=1.824224776991632 (change=7.476852976122572 %)
[2025-11-28 04:36:39] 2025-11-28 03:32:25,304 | INFO     | right removable region: 1099
[2025-11-28 04:36:39] 2025-11-28 03:32:25,306 | INFO     | sum of square deviations: 418371544981.3989
[2025-11-28 04:36:39] 2025-11-28 03:32:25,329 | INFO     | sum of deviations: 842223605335.5122
[2025-11-28 04:36:39] 2025-11-28 03:32:25,329 | INFO     | mean x: 1764267055.1067874
[2025-11-28 04:36:39] 2025-11-28 03:32:25,329 | INFO     | mean y: 2292173.8515837104
[2025-11-28 04:36:39] 2025-11-28 03:32:25,329 | INFO     | intersect: -3549353194.36477
[2025-11-28 04:36:39] 2025-11-28 03:32:25,330 | INFO     | chi2: 2.621692230033746
[2025-11-28 04:36:39] 2025-11-28 03:32:25,331 | INFO     | current chi2=2.621692230033746 (change=39.039304952667244 %)
[2025-11-28 04:36:39] 2025-11-28 03:32:25,332 | INFO     | sum of square deviations: 412717877406.34155
[2025-11-28 04:36:39] 2025-11-28 03:32:25,356 | INFO     | sum of deviations: 822261056985.5013
[2025-11-28 04:36:39] 2025-11-28 03:32:25,356 | INFO     | mean x: 1764267207.6072726
[2025-11-28 04:36:39] 2025-11-28 03:32:25,356 | INFO     | mean y: 2292711.9872727273
[2025-11-28 04:36:39] 2025-11-28 03:32:25,356 | INFO     | intersect: -3512670652.4509954
[2025-11-28 04:36:39] 2025-11-28 03:32:25,358 | INFO     | chi2: 2.619208675817314
[2025-11-28 04:36:39] 2025-11-28 03:32:25,358 | INFO     | current chi2=2.619208675817314 (change=0.09473095994948749 %)
[2025-11-28 04:36:39] 2025-11-28 03:32:25,358 | INFO     | left removable region: 20
[2025-11-28 04:36:39] 2025-11-28 03:32:25,359 | INFO     | sum of square deviations: 389528631209.09564
[2025-11-28 04:36:39] 2025-11-28 03:32:25,382 | INFO     | sum of deviations: 1091574437633.5071
[2025-11-28 04:36:39] 2025-11-28 03:32:25,382 | INFO     | mean x: 1764267177.1093605
[2025-11-28 04:36:39] 2025-11-28 03:32:25,382 | INFO     | mean y: 2300583.4448563484
[2025-11-28 04:36:39] 2025-11-28 03:32:25,382 | INFO     | intersect: -4941697873.640668
[2025-11-28 04:36:39] 2025-11-28 03:32:25,384 | INFO     | chi2: 0.1247712129167403
[2025-11-28 04:36:39] 2025-11-28 03:32:25,384 | INFO     | current memory leak: 2.80 B/s (using 1079 data points, chi2=0.12)
[2025-11-28 04:36:39] 2025-11-28 03:32:25,385 | INFO     | could have reported an average CPU frequency of 2613 MHz (41 samples)
[2025-11-28 04:36:39] 2025-11-28 03:32:25,385 | INFO     | ..............................
[2025-11-28 04:36:39] 2025-11-28 03:32:25,385 | INFO     | . Timing measurements:
[2025-11-28 04:36:39] 2025-11-28 03:32:25,386 | INFO     | . get job = 0 s
[2025-11-28 04:36:39] 2025-11-28 03:32:25,386 | INFO     | . initial setup = 1 s
[2025-11-28 04:36:39] 2025-11-28 03:32:25,386 | INFO     | . payload setup = 6 s
[2025-11-28 04:36:39] 2025-11-28 03:32:25,386 | INFO     | . stage-in = 0 s
[2025-11-28 04:36:39] 2025-11-28 03:32:25,386 | INFO     | . payload execution = 67656 s
[2025-11-28 04:36:39] 2025-11-28 03:32:25,386 | INFO     | . stage-out = 2 s
[2025-11-28 04:36:39] 2025-11-28 03:32:25,386 | INFO     | . log creation = 0 s
[2025-11-28 04:36:39] 2025-11-28 03:32:25,386 | INFO     | ..............................
[2025-11-28 04:36:39] 2025-11-28 03:32:25,638 | INFO     | 
[2025-11-28 04:36:39] 2025-11-28 03:32:25,638 | INFO     | job summary report
[2025-11-28 04:36:39] 2025-11-28 03:32:25,638 | INFO     | --------------------------------------------------
[2025-11-28 04:36:39] 2025-11-28 03:32:25,638 | INFO     | PanDA job id: 6893843607
[2025-11-28 04:36:39] 2025-11-28 03:32:25,638 | INFO     | task id: 47523449
[2025-11-28 04:36:39] 2025-11-28 03:32:25,639 | INFO     | errors: (none)
[2025-11-28 04:36:39] 2025-11-28 03:32:25,639 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-28 04:36:39] 2025-11-28 03:32:25,639 | INFO     | pilot state: finished 
[2025-11-28 04:36:39] 2025-11-28 03:32:25,639 | INFO     | transexitcode: 0
[2025-11-28 04:36:39] 2025-11-28 03:32:25,639 | INFO     | exeerrorcode: 0
[2025-11-28 04:36:39] 2025-11-28 03:32:25,639 | INFO     | exeerrordiag: 
[2025-11-28 04:36:39] 2025-11-28 03:32:25,639 | INFO     | exitcode: 0
[2025-11-28 04:36:39] 2025-11-28 03:32:25,639 | INFO     | exitmsg: OK
[2025-11-28 04:36:39] 2025-11-28 03:32:25,639 | INFO     | cpuconsumptiontime: 262127 s
[2025-11-28 04:36:39] 2025-11-28 03:32:25,639 | INFO     | nevents: 1000
[2025-11-28 04:36:39] 2025-11-28 03:32:25,639 | INFO     | neventsw: 0
[2025-11-28 04:36:39] 2025-11-28 03:32:25,639 | INFO     | pid: 3649148
[2025-11-28 04:36:39] 2025-11-28 03:32:25,640 | INFO     | pgrp: 3649148
[2025-11-28 04:36:39] 2025-11-28 03:32:25,640 | INFO     | corecount: 4
[2025-11-28 04:36:39] 2025-11-28 03:32:25,640 | INFO     | event service: False
[2025-11-28 04:36:39] 2025-11-28 03:32:25,640 | INFO     | sizes: {0: 2284099, 1: 2284354, 6: 2284616, 12: 2284644, 67667: 2340909, 67671: 2349925, 67674: 2350109, 67680: 2350451}
[2025-11-28 04:36:39] 2025-11-28 03:32:25,640 | INFO     | --------------------------------------------------
[2025-11-28 04:36:39] 2025-11-28 03:32:25,640 | INFO     | 
[2025-11-28 04:36:39] 2025-11-28 03:32:25,640 | INFO     | executing command: ls -lF /scratch/boinc/var/slot56/slots/0
[2025-11-28 04:36:39] 2025-11-28 03:32:25,664 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-28 04:36:39] 2025-11-28 03:32:25,664 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-28 04:36:39] 2025-11-28 03:32:25,664 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-28 04:36:39] 2025-11-28 03:32:25,664 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-28 04:36:39] 2025-11-28 03:32:25,664 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-28 04:36:39] 2025-11-28 03:32:25,665 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-28 04:36:39] 2025-11-28 03:32:25,665 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-28 04:36:39] 2025-11-28 03:32:25,665 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-28 04:36:39] 2025-11-28 03:32:25,665 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-28 04:36:39] 2025-11-28 03:32:25,665 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-28 04:36:39] 2025-11-28 03:32:25,665 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-28 04:36:39] 2025-11-28 03:32:25,665 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-28 04:36:39] 2025-11-28 03:32:25,665 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-28 04:36:39] 2025-11-28 03:32:25,665 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-28 04:36:39] 2025-11-28 03:32:25,665 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-28 04:36:39] 2025-11-28 03:32:25,665 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-28 04:36:39] 2025-11-28 03:32:25,666 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-28 04:36:39] 2025-11-28 03:32:25,666 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-28 04:36:39] 2025-11-28 03:32:25,666 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-28 04:36:39] 2025-11-28 03:32:25,666 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-28 04:36:39] 2025-11-28 03:32:25,666 | INFO     | job 6893843607 has completed (purged errors)
[2025-11-28 04:36:39] 2025-11-28 03:32:25,666 | INFO     | overall cleanup function is called
[2025-11-28 04:36:39] 2025-11-28 03:32:26,680 | INFO     | --- collectZombieJob: --- 10, [3649148]
[2025-11-28 04:36:39] 2025-11-28 03:32:26,680 | INFO     | zombie collector waiting for pid 3649148
[2025-11-28 04:36:39] 2025-11-28 03:32:26,680 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-28 04:36:39] 2025-11-28 03:32:26,680 | INFO     | collected zombie processes
[2025-11-28 04:36:39] 2025-11-28 03:32:26,680 | INFO     | will attempt to kill all subprocesses of pid=3649148
[2025-11-28 04:36:39] 2025-11-28 03:32:27,079 | INFO     | process IDs to be killed: [3649148] (in reverse order)
[2025-11-28 04:36:39] 2025-11-28 03:32:27,196 | WARNING  | found no corresponding commands to process id(s)
[2025-11-28 04:36:39] 2025-11-28 03:32:27,197 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-28 04:36:39] 2025-11-28 03:32:27,210 | INFO     | did not find any defunct processes belonging to 3649148
[2025-11-28 04:36:39] 2025-11-28 03:32:27,223 | INFO     | did not find any defunct processes belonging to 3649148
[2025-11-28 04:36:39] 2025-11-28 03:32:27,224 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-28 04:36:39] 2025-11-28 03:32:27,225 | INFO     | ready for new job
[2025-11-28 04:36:39] 2025-11-28 03:32:27,225 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-28 04:36:39] 2025-11-28 03:32:27,231 | INFO     | ***************************************
[2025-11-28 04:36:39] 2025-11-28 03:32:27,231 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-28 04:36:39] 2025-11-28 03:32:27,231 | INFO     | ***************************************
[2025-11-28 04:36:39] 2025-11-28 03:32:27,231 | INFO     | 
[2025-11-28 04:36:39] 2025-11-28 03:32:27,235 | INFO     | architecture information:
[2025-11-28 04:36:39] 2025-11-28 03:32:27,236 | INFO     | executing command: cat /etc/os-release
[2025-11-28 04:36:39] 2025-11-28 03:32:27,250 | INFO     | cat /etc/os-release:
[2025-11-28 04:36:39] NAME="CentOS Linux"
[2025-11-28 04:36:39] VERSION="7 (Core)"
[2025-11-28 04:36:39] ID="centos"
[2025-11-28 04:36:39] ID_LIKE="rhel fedora"
[2025-11-28 04:36:39] VERSION_ID="7"
[2025-11-28 04:36:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-28 04:36:39] ANSI_COLOR="0;31"
[2025-11-28 04:36:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-28 04:36:39] HOME_URL="https://www.centos.org/"
[2025-11-28 04:36:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-28 04:36:39] 
[2025-11-28 04:36:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-28 04:36:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-28 04:36:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-28 04:36:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-28 04:36:39] 
[2025-11-28 04:36:39] 2025-11-28 03:32:27,251 | INFO     | ***************************************
[2025-11-28 04:36:39] 2025-11-28 03:32:27,752 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/0
[2025-11-28 04:36:39] 2025-11-28 03:32:27,771 | INFO     | sufficient remaining disk space (673229832192 B)
[2025-11-28 04:36:39] 2025-11-28 03:32:27,771 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-28 04:36:39] 2025-11-28 03:32:27,772 | INFO     | current server update state: UPDATING_FINAL
[2025-11-28 04:36:39] 2025-11-28 03:32:27,772 | INFO     | update_server=False
[2025-11-28 04:36:39] 2025-11-28 03:32:27,772 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-28 04:36:39] 2025-11-28 03:32:27,772 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-28 04:36:39] 2025-11-28 03:32:27,776 | INFO     | all data control threads have been joined
[2025-11-28 04:36:39] 2025-11-28 03:32:28,175 | INFO     | all payload control threads have been joined
[2025-11-28 04:36:39] 2025-11-28 03:32:28,306 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-28 04:36:39] 2025-11-28 03:32:28,306 | INFO     | aborting loop
[2025-11-28 04:36:39] 2025-11-28 03:32:28,772 | INFO     | all job control threads have been joined
[2025-11-28 04:36:39] 2025-11-28 03:32:28,776 | INFO     | [payload] validate_post thread has finished
[2025-11-28 04:36:39] 2025-11-28 03:32:28,777 | INFO     | [job] retrieve thread has finished
[2025-11-28 04:36:39] 2025-11-28 03:32:28,778 | INFO     | [payload] failed_post thread has finished
[2025-11-28 04:36:39] 2025-11-28 03:32:28,781 | INFO     | [data] control thread has finished
[2025-11-28 04:36:39] 2025-11-28 03:32:28,951 | INFO     | [payload] execute_payloads thread has finished
[2025-11-28 04:36:39] 2025-11-28 03:32:29,117 | INFO     | [payload] validate_pre thread has finished
[2025-11-28 04:36:39] 2025-11-28 03:32:29,176 | INFO     | [payload] control thread has finished
[2025-11-28 04:36:39] 2025-11-28 03:32:29,312 | INFO     | [job] job monitor thread has finished
[2025-11-28 04:36:39] 2025-11-28 03:32:29,452 | INFO     | [job] create_data_payload thread has finished
[2025-11-28 04:36:39] 2025-11-28 03:32:29,452 | INFO     | [data] copytool_in thread has finished
[2025-11-28 04:36:39] 2025-11-28 03:32:29,777 | INFO     | [job] control thread has finished
[2025-11-28 04:36:39] 2025-11-28 03:32:29,778 | INFO     | [data] copytool_out thread has finished
[2025-11-28 04:36:39] 2025-11-28 03:32:29,905 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-28 04:36:39] 2025-11-28 03:32:30,239 | INFO     | [job] validate thread has finished
[2025-11-28 04:36:39] 2025-11-28 03:32:30,492 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-28 04:36:39] 2025-11-28 03:32:31,497 | INFO     | [job] queue monitor thread has finished
[2025-11-28 04:36:39] 2025-11-28 03:32:33,911 | INFO     | [data] queue_monitor thread has finished
[2025-11-28 04:36:39] 2025-11-28 03:32:38,499 | INFO     | job.realtimelogging is not enabled
[2025-11-28 04:36:39] 2025-11-28 03:32:39,504 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-28 04:36:39] 2025-11-28 03:32:58,579 | INFO     | PID=3641059 has CPU usage=8.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-28 04:36:39] 2025-11-28 03:32:58,580 | INFO     | .. there are 4 such processes running
[2025-11-28 04:36:39] 2025-11-28 03:32:58,580 | INFO     | found 0 job(s) in 20 queues
[2025-11-28 04:36:39] 2025-11-28 03:32:58,580 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-28 04:36:39] 2025-11-28 03:32:58,580 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-28 04:36:39] 2025-11-28 03:33:03,309 | INFO     | [monitor] cgroup control has ended
[2025-11-28 04:36:39] 2025-11-28 03:33:04,334 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23021273286464)>', '<ExcThread(monitor, started 23021030958848)>']
[2025-11-28 04:36:39] 2025-11-28 03:33:04,605 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-28 04:36:39] 2025-11-28 03:33:04,605 | INFO     | [monitor] control thread has ended
[2025-11-28 04:36:39] 2025-11-28 03:33:09,359 | INFO     | all workflow threads have been joined
[2025-11-28 04:36:39] 2025-11-28 03:33:09,359 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-28 04:36:39] 2025-11-28 03:33:09,359 | INFO     | traces error code: 0
[2025-11-28 04:36:39] 2025-11-28 03:33:09,360 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-28 04:36:39] 2025-11-28 03:33:09,512 [wrapper] ==== pilot stdout END ====
[2025-11-28 04:36:39] 2025-11-28 03:33:09,515 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-28 04:36:39] 2025-11-28 03:33:09,518 [wrapper] pilotpid: 3641059
[2025-11-28 04:36:39] 2025-11-28 03:33:09,521 [wrapper] Pilot exit status: 0
[2025-11-28 04:36:39] 2025-11-28 03:33:09,533 [wrapper] pandaids: 6893843607
[2025-11-28 04:36:39] 2025-11-28 03:33:09,618 [wrapper] cleanup supervisor_pilot  380493 3641060
[2025-11-28 04:36:39] 2025-11-28 03:33:09,621 [wrapper] Test setup, not cleaning
[2025-11-28 04:36:39] 2025-11-28 03:33:09,625 [wrapper] apfmon messages muted
[2025-11-28 04:36:39] 2025-11-28 03:33:09,628 [wrapper] ==== wrapper stdout END ====
[2025-11-28 04:36:39] 2025-11-28 03:33:09,631 [wrapper] ==== wrapper stderr END ====
[2025-11-28 04:36:39]  *** Error codes and diagnostics ***
[2025-11-28 04:36:39]     "exeErrorCode": 0,
[2025-11-28 04:36:39]     "exeErrorDiag": "",
[2025-11-28 04:36:39]     "pilotErrorCode": 0,
[2025-11-28 04:36:39]     "pilotErrorDiag": "",
[2025-11-28 04:36:39]  *** Listing of results directory ***
[2025-11-28 04:36:39] total 1333740
[2025-11-28 04:36:39] -rw-r--r-- 1 boinc boinc    576529 Nov 20 11:06 pilot3.tar.gz
[2025-11-28 04:36:39] -rwx------ 1 boinc boinc     36292 Nov 20 11:22 runpilot2-wrapper.sh
[2025-11-28 04:36:39] -rw-r--r-- 1 boinc boinc      5112 Nov 20 11:23 queuedata.json
[2025-11-28 04:36:39] -rw-r--r-- 1 boinc boinc       100 Nov 27 09:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-28 04:36:39] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 09:43 run_atlas
[2025-11-28 04:36:39] -rw-r--r-- 1 boinc boinc       105 Nov 27 09:43 job.xml
[2025-11-28 04:36:39] -rw-r--r-- 2 boinc boinc 412828339 Nov 27 09:43 EVNT.47493127._000202.pool.root.1
[2025-11-28 04:36:39] drwxrwx--x 2 boinc boinc      4096 Nov 27 09:43 shared
[2025-11-28 04:36:39] -rw-r--r-- 2 boinc boinc    590104 Nov 27 09:43 input.tar.gz
[2025-11-28 04:36:39] -rw-r--r-- 2 boinc boinc     15847 Nov 27 09:43 start_atlas.sh
[2025-11-28 04:36:39] -rw-r--r-- 1 boinc boinc         0 Nov 27 09:43 boinc_lockfile
[2025-11-28 04:36:39] -rw-r--r-- 1 boinc boinc      2786 Nov 27 09:43 pandaJob.out
[2025-11-28 04:36:39] -rw------- 1 boinc boinc    991573 Nov 27 09:44 agis_schedconf.cvmfs.json
[2025-11-28 04:36:39] drwx------ 5 boinc boinc      4096 Nov 27 09:44 pilot3
[2025-11-28 04:36:39] -rw-r--r-- 1 boinc boinc      6636 Nov 27 09:45 init_data.xml
[2025-11-28 04:36:39] -rw-r--r-- 1 boinc boinc       532 Nov 28 04:23 boinc_task_state.xml
[2025-11-28 04:36:39] -rw------- 1 boinc boinc 926572781 Nov 28 04:31 HITS.47523449._002019.pool.root.1
[2025-11-28 04:36:39] -rw------- 1 boinc boinc        95 Nov 28 04:32 pilot_heartbeat.json
[2025-11-28 04:36:39] -rw------- 1 boinc boinc      1045 Nov 28 04:32 memory_monitor_summary.json
[2025-11-28 04:36:39] -rw------- 1 boinc boinc   1516240 Nov 28 04:32 agis_ddmendpoints.agis.ALL.json
[2025-11-28 04:36:39] -rw------- 1 boinc boinc   1813941 Nov 28 04:32 log.47523449._002019.job.log.tgz.1
[2025-11-28 04:36:39] -rw------- 1 boinc boinc      8629 Nov 28 04:32 heartbeat.json
[2025-11-28 04:36:39] -rw------- 1 boinc boinc      4905 Nov 28 04:33 pilotlog.txt
[2025-11-28 04:36:39] -rw------- 1 boinc boinc   9397883 Nov 28 04:33 log.47523449._002019.job.log.1
[2025-11-28 04:36:39] -rw------- 1 boinc boinc       353 Nov 28 04:33 output.list
[2025-11-28 04:36:39] -rw-r--r-- 1 boinc boinc       620 Nov 28 04:33 runtime_log
[2025-11-28 04:36:39] -rw------- 1 boinc boinc  11233280 Nov 28 04:33 result.tar.gz
[2025-11-28 04:36:39] -rw-r--r-- 1 boinc boinc      9206 Nov 28 04:33 runtime_log.err
[2025-11-28 04:36:39] -rw------- 1 boinc boinc       670 Nov 28 04:33 932LDmqyGg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmPRGKDmO1rk4m.diag
[2025-11-28 04:36:39] -rw-r--r-- 1 boinc boinc        28 Nov 28 04:36 wrapper_checkpoint.txt
[2025-11-28 04:36:39] -rw-r--r-- 1 boinc boinc      8192 Nov 28 04:36 boinc_mmap_file
[2025-11-28 04:36:39] -rw-r--r-- 1 boinc boinc     21093 Nov 28 04:36 stderr.txt
[2025-11-28 04:36:39] HITS file was successfully produced:
[2025-11-28 04:36:39] -rw------- 1 boinc boinc 926572781 Nov 28 04:31 shared/HITS.pool.root.1
[2025-11-28 04:36:39]  *** Contents of shared directory: ***
[2025-11-28 04:36:39] total 1319592
[2025-11-28 04:36:39] -rw-r--r-- 2 boinc boinc 412828339 Nov 27 09:43 ATLAS.root_0
[2025-11-28 04:36:39] -rw-r--r-- 2 boinc boinc    590104 Nov 27 09:43 input.tar.gz
[2025-11-28 04:36:39] -rw-r--r-- 2 boinc boinc     15847 Nov 27 09:43 start_atlas.sh
[2025-11-28 04:36:39] -rw------- 1 boinc boinc 926572781 Nov 28 04:31 HITS.pool.root.1
[2025-11-28 04:36:39] -rw------- 1 boinc boinc  11233280 Nov 28 04:33 result.tar.gz
04:36:41 (3636921): run_atlas exited; CPU time 264787.995777
04:36:41 (3636921): called boinc_finish(0)

</stderr_txt>
]]>

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