Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
05:45:47 (2250816): wrapper (7.7.26015): starting
05:45:47 (2250816): wrapper: running run_atlas (--nthreads 4)
[2025-11-23 05:45:47] Arguments: --nthreads 4
[2025-11-23 05:45:47] Threads: 4
[2025-11-23 05:45:47] Checking for CVMFS
[2025-11-23 05:45:47] No cvmfs_config command found, will try listing directly
[2025-11-23 05:45:47] CVMFS is ok
[2025-11-23 05:45:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 05:45:47] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 05:45:47] Further information can be found at the LHC@home message board.
[2025-11-23 05:45:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 05:45:47] Checking for apptainer binary...
[2025-11-23 05:45:47] which: no apptainer in ((null))
[2025-11-23 05:45:47] apptainer is not installed, using version from CVMFS
[2025-11-23 05:45:47] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 05:45:47] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut09.grid.cesnet.cz
[2025-11-23 05:45:47] apptainer works
[2025-11-23 05:45:47] Set ATHENA_PROC_NUMBER=4
[2025-11-23 05:45:47] Set ATHENA_CORE_NUMBER=4
[2025-11-23 05:45:47] Starting ATLAS job with PandaID=6893857578
[2025-11-23 05:45:47] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 23:43:24]  *** The last 200 lines of the pilot log: ***
[2025-11-23 23:43:24] 2025-11-23 22:29:04,703 | INFO     | time since job start (63786s) is within the limit (172800.0s)
[2025-11-23 23:43:24] 2025-11-23 22:29:05,227 | INFO     | monitor loop #4579: job 0:6893857578 is in state 'finished'
[2025-11-23 23:43:24] 2025-11-23 22:29:05,227 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 23:43:24] 2025-11-23 22:29:06,129 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-23 23:43:24] 2025-11-23 22:29:06,140 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2486.702859375
[2025-11-23 23:43:24] 2025-11-23 22:29:06,153 | INFO     | using path: /scratch/boinc/var/slot60/slots/0/PanDA_Pilot-6893857578/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 23:43:24] 2025-11-23 22:29:06,154 | INFO     | extracted standard info from prmon json
[2025-11-23 23:43:24] 2025-11-23 22:29:06,154 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 23:43:24] 2025-11-23 22:29:06,154 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 23:43:24] 2025-11-23 22:29:06,173 | INFO     | fitting pss+swap vs Time
[2025-11-23 23:43:24] 2025-11-23 22:29:06,175 | INFO     | sum of square deviations: 353856328254.9988
[2025-11-23 23:43:24] 2025-11-23 22:29:06,199 | INFO     | sum of deviations: 1136426750043.0784
[2025-11-23 23:43:24] 2025-11-23 22:29:06,199 | INFO     | mean x: 1763905029.000957
[2025-11-23 23:43:24] 2025-11-23 22:29:06,199 | INFO     | mean y: 2280672.9224880384
[2025-11-23 23:43:24] 2025-11-23 22:29:06,200 | INFO     | intersect: -5662585826.363814
[2025-11-23 23:43:24] 2025-11-23 22:29:06,201 | INFO     | chi2: 3.6185950709237935
[2025-11-23 23:43:24] 2025-11-23 22:29:06,203 | INFO     | sum of square deviations: 348801312849.9991
[2025-11-23 23:43:24] 2025-11-23 22:29:06,226 | INFO     | sum of deviations: 1334031452351.654
[2025-11-23 23:43:24] 2025-11-23 22:29:06,226 | INFO     | mean x: 1763904876.5009615
[2025-11-23 23:43:24] 2025-11-23 22:29:06,226 | INFO     | mean y: 2286631.344230769
[2025-11-23 23:43:24] 2025-11-23 22:29:06,226 | INFO     | intersect: -6743974054.952807
[2025-11-23 23:43:24] 2025-11-23 22:29:06,228 | INFO     | chi2: 1.891786802786341
[2025-11-23 23:43:24] 2025-11-23 22:29:06,228 | INFO     | current chi2=1.891786802786341 (change=47.720406243095184 %)
[2025-11-23 23:43:24] 2025-11-23 22:29:06,229 | INFO     | sum of square deviations: 343794670444.99896
[2025-11-23 23:43:24] 2025-11-23 22:29:06,252 | INFO     | sum of deviations: 1361369852083.4504
[2025-11-23 23:43:24] 2025-11-23 22:29:06,253 | INFO     | mean x: 1763904724.000966
[2025-11-23 23:43:24] 2025-11-23 22:29:06,253 | INFO     | mean y: 2287460.5497584543
[2025-11-23 23:43:24] 2025-11-23 22:29:06,253 | INFO     | intersect: -6982482577.026097
[2025-11-23 23:43:24] 2025-11-23 22:29:06,254 | INFO     | chi2: 1.74937406070635
[2025-11-23 23:43:24] 2025-11-23 22:29:06,255 | INFO     | current chi2=1.74937406070635 (change=7.52794880851461 %)
[2025-11-23 23:43:24] 2025-11-23 22:29:06,255 | INFO     | right removable region: 1034
[2025-11-23 23:43:24] 2025-11-23 22:29:06,256 | INFO     | sum of square deviations: 348801312239.9991
[2025-11-23 23:43:24] 2025-11-23 22:29:06,279 | INFO     | sum of deviations: 964193142590.5261
[2025-11-23 23:43:24] 2025-11-23 22:29:06,279 | INFO     | mean x: 1763905181.5009615
[2025-11-23 23:43:24] 2025-11-23 22:29:06,279 | INFO     | mean y: 2285858.9778846153
[2025-11-23 23:43:24] 2025-11-23 22:29:06,279 | INFO     | intersect: -4873685705.638523
[2025-11-23 23:43:24] 2025-11-23 22:29:06,281 | INFO     | chi2: 1.955259111700969
[2025-11-23 23:43:24] 2025-11-23 22:29:06,281 | INFO     | current chi2=1.955259111700969 (change=45.96634678989353 %)
[2025-11-23 23:43:24] 2025-11-23 22:29:06,282 | INFO     | sum of square deviations: 343794669224.9989
[2025-11-23 23:43:24] 2025-11-23 22:29:06,304 | INFO     | sum of deviations: 933919562536.2847
[2025-11-23 23:43:24] 2025-11-23 22:29:06,304 | INFO     | mean x: 1763905334.000966
[2025-11-23 23:43:24] 2025-11-23 22:29:06,304 | INFO     | mean y: 2286780.7169082128
[2025-11-23 23:43:24] 2025-11-23 22:29:06,305 | INFO     | intersect: -4789368952.628636
[2025-11-23 23:43:24] 2025-11-23 22:29:06,306 | INFO     | chi2: 1.9448702796405648
[2025-11-23 23:43:24] 2025-11-23 22:29:06,306 | INFO     | current chi2=1.9448702796405648 (change=0.531327638277388 %)
[2025-11-23 23:43:24] 2025-11-23 22:29:06,306 | INFO     | left removable region: 20
[2025-11-23 23:43:24] 2025-11-23 22:29:06,308 | INFO     | sum of square deviations: 323289754593.49805
[2025-11-23 23:43:24] 2025-11-23 22:29:06,329 | INFO     | sum of deviations: 1116224447976.629
[2025-11-23 23:43:24] 2025-11-23 22:29:06,330 | INFO     | mean x: 1763905303.500986
[2025-11-23 23:43:24] 2025-11-23 22:29:06,330 | INFO     | mean y: 2294811.3727810653
[2025-11-23 23:43:24] 2025-11-23 22:29:06,330 | INFO     | intersect: -6087951463.703685
[2025-11-23 23:43:24] 2025-11-23 22:29:06,331 | INFO     | chi2: 0.06805295312471614
[2025-11-23 23:43:24] 2025-11-23 22:29:06,331 | INFO     | current memory leak: 3.45 B/s (using 1014 data points, chi2=0.07)
[2025-11-23 23:43:24] 2025-11-23 22:29:06,332 | INFO     | could have reported an average CPU frequency of 2606 MHz (39 samples)
[2025-11-23 23:43:24] 2025-11-23 22:29:06,333 | INFO     | ..............................
[2025-11-23 23:43:24] 2025-11-23 22:29:06,333 | INFO     | . Timing measurements:
[2025-11-23 23:43:24] 2025-11-23 22:29:06,333 | INFO     | . get job = 0 s
[2025-11-23 23:43:24] 2025-11-23 22:29:06,333 | INFO     | . initial setup = 1 s
[2025-11-23 23:43:24] 2025-11-23 22:29:06,333 | INFO     | . payload setup = 6 s
[2025-11-23 23:43:24] 2025-11-23 22:29:06,333 | INFO     | . stage-in = 0 s
[2025-11-23 23:43:24] 2025-11-23 22:29:06,333 | INFO     | . payload execution = 63748 s
[2025-11-23 23:43:24] 2025-11-23 22:29:06,333 | INFO     | . stage-out = 2 s
[2025-11-23 23:43:24] 2025-11-23 22:29:06,333 | INFO     | . log creation = 0 s
[2025-11-23 23:43:24] 2025-11-23 22:29:06,333 | INFO     | ..............................
[2025-11-23 23:43:24] 2025-11-23 22:29:06,434 | INFO     | 
[2025-11-23 23:43:24] 2025-11-23 22:29:06,435 | INFO     | job summary report
[2025-11-23 23:43:24] 2025-11-23 22:29:06,435 | INFO     | --------------------------------------------------
[2025-11-23 23:43:24] 2025-11-23 22:29:06,435 | INFO     | PanDA job id: 6893857578
[2025-11-23 23:43:24] 2025-11-23 22:29:06,435 | INFO     | task id: 47523449
[2025-11-23 23:43:24] 2025-11-23 22:29:06,435 | INFO     | errors: (none)
[2025-11-23 23:43:24] 2025-11-23 22:29:06,435 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 23:43:24] 2025-11-23 22:29:06,435 | INFO     | pilot state: finished 
[2025-11-23 23:43:24] 2025-11-23 22:29:06,435 | INFO     | transexitcode: 0
[2025-11-23 23:43:24] 2025-11-23 22:29:06,435 | INFO     | exeerrorcode: 0
[2025-11-23 23:43:24] 2025-11-23 22:29:06,435 | INFO     | exeerrordiag: 
[2025-11-23 23:43:24] 2025-11-23 22:29:06,435 | INFO     | exitcode: 0
[2025-11-23 23:43:24] 2025-11-23 22:29:06,435 | INFO     | exitmsg: OK
[2025-11-23 23:43:24] 2025-11-23 22:29:06,436 | INFO     | cpuconsumptiontime: 252721 s
[2025-11-23 23:43:24] 2025-11-23 22:29:06,436 | INFO     | nevents: 1000
[2025-11-23 23:43:24] 2025-11-23 22:29:06,436 | INFO     | neventsw: 0
[2025-11-23 23:43:24] 2025-11-23 22:29:06,436 | INFO     | pid: 2271934
[2025-11-23 23:43:24] 2025-11-23 22:29:06,436 | INFO     | pgrp: 2271934
[2025-11-23 23:43:24] 2025-11-23 22:29:06,436 | INFO     | corecount: 4
[2025-11-23 23:43:24] 2025-11-23 22:29:06,436 | INFO     | event service: False
[2025-11-23 23:43:24] 2025-11-23 22:29:06,436 | INFO     | sizes: {0: 2298817, 5: 2299079, 11: 2299135, 63759: 2353364, 63762: 2362380, 63764: 2362436, 63772: 2362838}
[2025-11-23 23:43:24] 2025-11-23 22:29:06,436 | INFO     | --------------------------------------------------
[2025-11-23 23:43:24] 2025-11-23 22:29:06,436 | INFO     | 
[2025-11-23 23:43:24] 2025-11-23 22:29:06,436 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/0
[2025-11-23 23:43:24] 2025-11-23 22:29:06,457 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 23:43:24] 2025-11-23 22:29:06,457 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 23:43:24] 2025-11-23 22:29:06,457 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 23:43:24] 2025-11-23 22:29:06,457 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 23:43:24] 2025-11-23 22:29:06,458 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 23:43:24] 2025-11-23 22:29:06,458 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 23:43:24] 2025-11-23 22:29:06,458 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 23:43:24] 2025-11-23 22:29:06,458 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 23:43:24] 2025-11-23 22:29:06,458 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 23:43:24] 2025-11-23 22:29:06,458 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 23:43:24] 2025-11-23 22:29:06,458 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 23:43:24] 2025-11-23 22:29:06,458 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 23:43:24] 2025-11-23 22:29:06,458 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 23:43:24] 2025-11-23 22:29:06,458 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 23:43:24] 2025-11-23 22:29:06,458 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 23:43:24] 2025-11-23 22:29:06,459 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 23:43:24] 2025-11-23 22:29:06,459 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 23:43:24] 2025-11-23 22:29:06,459 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 23:43:24] 2025-11-23 22:29:06,459 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 23:43:24] 2025-11-23 22:29:06,459 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 23:43:24] 2025-11-23 22:29:06,459 | INFO     | job 6893857578 has completed (purged errors)
[2025-11-23 23:43:24] 2025-11-23 22:29:06,459 | INFO     | overall cleanup function is called
[2025-11-23 23:43:24] 2025-11-23 22:29:07,473 | INFO     | --- collectZombieJob: --- 10, [2271934]
[2025-11-23 23:43:24] 2025-11-23 22:29:07,473 | INFO     | zombie collector waiting for pid 2271934
[2025-11-23 23:43:24] 2025-11-23 22:29:07,473 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 23:43:24] 2025-11-23 22:29:07,473 | INFO     | collected zombie processes
[2025-11-23 23:43:24] 2025-11-23 22:29:07,473 | INFO     | will attempt to kill all subprocesses of pid=2271934
[2025-11-23 23:43:24] 2025-11-23 22:29:07,883 | INFO     | process IDs to be killed: [2271934] (in reverse order)
[2025-11-23 23:43:24] 2025-11-23 22:29:08,005 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 23:43:24] 2025-11-23 22:29:08,005 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 23:43:24] 2025-11-23 22:29:08,019 | INFO     | did not find any defunct processes belonging to 2271934
[2025-11-23 23:43:24] 2025-11-23 22:29:08,033 | INFO     | did not find any defunct processes belonging to 2271934
[2025-11-23 23:43:24] 2025-11-23 22:29:08,034 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 23:43:24] 2025-11-23 22:29:08,034 | INFO     | ready for new job
[2025-11-23 23:43:24] 2025-11-23 22:29:08,035 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 23:43:24] 2025-11-23 22:29:08,040 | INFO     | ***************************************
[2025-11-23 23:43:24] 2025-11-23 22:29:08,040 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 23:43:24] 2025-11-23 22:29:08,040 | INFO     | ***************************************
[2025-11-23 23:43:24] 2025-11-23 22:29:08,040 | INFO     | 
[2025-11-23 23:43:24] 2025-11-23 22:29:08,044 | INFO     | architecture information:
[2025-11-23 23:43:24] 2025-11-23 22:29:08,045 | INFO     | executing command: cat /etc/os-release
[2025-11-23 23:43:24] 2025-11-23 22:29:08,063 | INFO     | cat /etc/os-release:
[2025-11-23 23:43:24] NAME="CentOS Linux"
[2025-11-23 23:43:24] VERSION="7 (Core)"
[2025-11-23 23:43:24] ID="centos"
[2025-11-23 23:43:24] ID_LIKE="rhel fedora"
[2025-11-23 23:43:24] VERSION_ID="7"
[2025-11-23 23:43:24] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 23:43:24] ANSI_COLOR="0;31"
[2025-11-23 23:43:24] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 23:43:24] HOME_URL="https://www.centos.org/"
[2025-11-23 23:43:24] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 23:43:24] 
[2025-11-23 23:43:24] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 23:43:24] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 23:43:24] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 23:43:24] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 23:43:24] 
[2025-11-23 23:43:24] 2025-11-23 22:29:08,064 | INFO     | ***************************************
[2025-11-23 23:43:24] 2025-11-23 22:29:08,566 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/0
[2025-11-23 23:43:24] 2025-11-23 22:29:08,582 | INFO     | sufficient remaining disk space (679494025216 B)
[2025-11-23 23:43:24] 2025-11-23 22:29:08,582 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 23:43:24] 2025-11-23 22:29:08,582 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 23:43:24] 2025-11-23 22:29:08,582 | INFO     | update_server=False
[2025-11-23 23:43:24] 2025-11-23 22:29:08,583 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 23:43:24] 2025-11-23 22:29:08,749 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 23:43:24] 2025-11-23 22:29:08,749 | INFO     | aborting loop
[2025-11-23 23:43:24] 2025-11-23 22:29:09,260 | INFO     | all payload control threads have been joined
[2025-11-23 23:43:24] 2025-11-23 22:29:09,442 | INFO     | all data control threads have been joined
[2025-11-23 23:43:24] 2025-11-23 22:29:09,588 | INFO     | [job] retrieve thread has finished
[2025-11-23 23:43:24] 2025-11-23 22:29:09,612 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 23:43:24] 2025-11-23 22:29:09,636 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 23:43:24] 2025-11-23 22:29:09,637 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 23:43:24] 2025-11-23 22:29:09,692 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 23:43:24] 2025-11-23 22:29:09,723 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 23:43:24] 2025-11-23 22:29:09,754 | INFO     | [job] job monitor thread has finished
[2025-11-23 23:43:24] 2025-11-23 22:29:09,802 | INFO     | [payload] failed_post thread has finished
[2025-11-23 23:43:24] 2025-11-23 22:29:09,933 | INFO     | [data] copytool_in thread has finished
[2025-11-23 23:43:24] 2025-11-23 22:29:10,016 | INFO     | all job control threads have been joined
[2025-11-23 23:43:24] 2025-11-23 22:29:10,265 | INFO     | [payload] control thread has finished
[2025-11-23 23:43:24] 2025-11-23 22:29:10,388 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 23:43:24] 2025-11-23 22:29:10,447 | INFO     | [data] control thread has finished
[2025-11-23 23:43:24] 2025-11-23 22:29:10,761 | INFO     | [payload] validate_post thread has finished
[2025-11-23 23:43:24] 2025-11-23 22:29:10,982 | INFO     | [job] validate thread has finished
[2025-11-23 23:43:24] 2025-11-23 22:29:11,021 | INFO     | [job] control thread has finished
[2025-11-23 23:43:24] 2025-11-23 22:29:11,444 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 23:43:24] 2025-11-23 22:29:11,617 | INFO     | [data] copytool_out thread has finished
[2025-11-23 23:43:24] 2025-11-23 22:29:12,449 | INFO     | [job] queue monitor thread has finished
[2025-11-23 23:43:24] 2025-11-23 22:29:13,728 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 23:43:24] 2025-11-23 22:29:38,317 | INFO     | PID=2257071 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 23:43:24] 2025-11-23 22:29:38,317 | INFO     | .. there are 5 such processes running
[2025-11-23 23:43:24] 2025-11-23 22:29:38,318 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 23:43:24] 2025-11-23 22:29:38,318 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 23:43:24] 2025-11-23 22:29:38,318 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 23:43:24] 2025-11-23 22:29:41,128 | INFO     | [monitor] cgroup control has ended
[2025-11-23 23:43:24] 2025-11-23 22:29:42,217 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23423884842816)>', '<ExcThread(monitor, started 23423650600704)>']
[2025-11-23 23:43:24] 2025-11-23 22:29:42,338 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 23:43:24] 2025-11-23 22:29:42,338 | INFO     | [monitor] control thread has ended
[2025-11-23 23:43:24] 2025-11-23 22:29:47,243 | INFO     | all workflow threads have been joined
[2025-11-23 23:43:24] 2025-11-23 22:29:47,244 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 23:43:24] 2025-11-23 22:29:47,245 | INFO     | traces error code: 0
[2025-11-23 23:43:24] 2025-11-23 22:29:47,245 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 23:43:24] 2025-11-23 22:29:47,394 [wrapper] ==== pilot stdout END ====
[2025-11-23 23:43:24] 2025-11-23 22:29:47,396 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 23:43:24] 2025-11-23 22:29:47,399 [wrapper] pilotpid: 2257071
[2025-11-23 23:43:24] 2025-11-23 22:29:47,401 [wrapper] Pilot exit status: 0
[2025-11-23 23:43:24] 2025-11-23 22:29:47,411 [wrapper] pandaids: 6893857578
[2025-11-23 23:43:24] 2025-11-23 22:29:47,491 [wrapper] cleanup supervisor_pilot 3246034 2257072
[2025-11-23 23:43:24] 2025-11-23 22:29:47,494 [wrapper] Test setup, not cleaning
[2025-11-23 23:43:24] 2025-11-23 22:29:47,497 [wrapper] apfmon messages muted
[2025-11-23 23:43:24] 2025-11-23 22:29:47,499 [wrapper] ==== wrapper stdout END ====
[2025-11-23 23:43:24] 2025-11-23 22:29:47,502 [wrapper] ==== wrapper stderr END ====
[2025-11-23 23:43:24]  *** Error codes and diagnostics ***
[2025-11-23 23:43:24]     "exeErrorCode": 0,
[2025-11-23 23:43:24]     "exeErrorDiag": "",
[2025-11-23 23:43:24]     "pilotErrorCode": 0,
[2025-11-23 23:43:24]     "pilotErrorDiag": "",
[2025-11-23 23:43:24]  *** Listing of results directory ***
[2025-11-23 23:43:24] total 1319940
[2025-11-23 23:43:24] -rw-r--r-- 1 boinc boinc    576529 Nov 20 14:01 pilot3.tar.gz
[2025-11-23 23:43:24] -rw-r--r-- 1 boinc boinc      5112 Nov 20 14:05 queuedata.json
[2025-11-23 23:43:24] -rwx------ 1 boinc boinc     36292 Nov 20 14:06 runpilot2-wrapper.sh
[2025-11-23 23:43:24] -rw-r--r-- 1 boinc boinc       100 Nov 23 05:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 23:43:24] -rwxr-xr-x 1 boinc boinc      7986 Nov 23 05:45 run_atlas
[2025-11-23 23:43:24] -rw-r--r-- 1 boinc boinc       105 Nov 23 05:45 job.xml
[2025-11-23 23:43:24] -rw-r--r-- 1 boinc boinc      6634 Nov 23 05:45 init_data.xml
[2025-11-23 23:43:24] -rw-r--r-- 2 boinc boinc 410451024 Nov 23 05:45 EVNT.47493127._000492.pool.root.1
[2025-11-23 23:43:24] -rw-r--r-- 2 boinc boinc     15847 Nov 23 05:45 start_atlas.sh
[2025-11-23 23:43:24] drwxrwx--x 2 boinc boinc      4096 Nov 23 05:45 shared
[2025-11-23 23:43:24] -rw-r--r-- 2 boinc boinc    590103 Nov 23 05:45 input.tar.gz
[2025-11-23 23:43:24] -rw-r--r-- 1 boinc boinc         0 Nov 23 05:45 boinc_lockfile
[2025-11-23 23:43:24] -rw-r--r-- 1 boinc boinc      2785 Nov 23 05:45 pandaJob.out
[2025-11-23 23:43:24] -rw------- 1 boinc boinc    989784 Nov 23 05:45 agis_schedconf.cvmfs.json
[2025-11-23 23:43:24] drwx------ 5 boinc boinc      4096 Nov 23 05:45 pilot3
[2025-11-23 23:43:24] -rw-r--r-- 1 boinc boinc       532 Nov 23 23:20 boinc_task_state.xml
[2025-11-23 23:43:24] -rw------- 1 boinc boinc 915843659 Nov 23 23:28 HITS.47523449._004915.pool.root.1
[2025-11-23 23:43:24] -rw------- 1 boinc boinc      1046 Nov 23 23:28 memory_monitor_summary.json
[2025-11-23 23:43:24] -rw------- 1 boinc boinc   1526164 Nov 23 23:28 agis_ddmendpoints.agis.ALL.json
[2025-11-23 23:43:24] -rw------- 1 boinc boinc   1766496 Nov 23 23:28 log.47523449._004915.job.log.tgz.1
[2025-11-23 23:43:24] -rw------- 1 boinc boinc      8634 Nov 23 23:29 heartbeat.json
[2025-11-23 23:43:24] -rw------- 1 boinc boinc        95 Nov 23 23:29 pilot_heartbeat.json
[2025-11-23 23:43:24] -rw------- 1 boinc boinc      4833 Nov 23 23:29 pilotlog.txt
[2025-11-23 23:43:24] -rw------- 1 boinc boinc   8931774 Nov 23 23:29 log.47523449._004915.job.log.1
[2025-11-23 23:43:24] -rw------- 1 boinc boinc       353 Nov 23 23:29 output.list
[2025-11-23 23:43:24] -rw-r--r-- 1 boinc boinc       620 Nov 23 23:29 runtime_log
[2025-11-23 23:43:24] -rw------- 1 boinc boinc  10721280 Nov 23 23:29 result.tar.gz
[2025-11-23 23:43:24] -rw-r--r-- 1 boinc boinc      9206 Nov 23 23:29 runtime_log.err
[2025-11-23 23:43:24] -rw------- 1 boinc boinc       670 Nov 23 23:29 DUSNDmGYJg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm3sHKDmouj4fm.diag
[2025-11-23 23:43:24] -rw-r--r-- 1 boinc boinc        28 Nov 23 23:43 wrapper_checkpoint.txt
[2025-11-23 23:43:24] -rw-r--r-- 1 boinc boinc      8192 Nov 23 23:43 boinc_mmap_file
[2025-11-23 23:43:24] -rw-r--r-- 1 boinc boinc     21101 Nov 23 23:43 stderr.txt
[2025-11-23 23:43:24] HITS file was successfully produced:
[2025-11-23 23:43:24] -rw------- 1 boinc boinc 915843659 Nov 23 23:28 shared/HITS.pool.root.1
[2025-11-23 23:43:24]  *** Contents of shared directory: ***
[2025-11-23 23:43:24] total 1306288
[2025-11-23 23:43:24] -rw-r--r-- 2 boinc boinc 410451024 Nov 23 05:45 ATLAS.root_0
[2025-11-23 23:43:24] -rw-r--r-- 2 boinc boinc     15847 Nov 23 05:45 start_atlas.sh
[2025-11-23 23:43:24] -rw-r--r-- 2 boinc boinc    590103 Nov 23 05:45 input.tar.gz
[2025-11-23 23:43:24] -rw------- 1 boinc boinc 915843659 Nov 23 23:28 HITS.pool.root.1
[2025-11-23 23:43:24] -rw------- 1 boinc boinc  10721280 Nov 23 23:29 result.tar.gz
23:43:26 (2250816): run_atlas exited; CPU time 255126.964642
23:43:26 (2250816): called boinc_finish(0)

</stderr_txt>
]]>

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