Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
21:25:17 (3140405): wrapper (7.7.26015): starting
21:25:17 (3140405): wrapper: running run_atlas (--nthreads 10)
[2025-11-20 21:25:17] Arguments: --nthreads 10
[2025-11-20 21:25:17] Threads: 10
[2025-11-20 21:25:17] Checking for CVMFS
[2025-11-20 21:25:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 21:25:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 21:25:18] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 21:25:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 21:25:18] 2.13.2.0 5664 25971 191256 153104 2 89 36238539 39288833 4964 16776704 0 16678962 99.608 12621311 27628 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-20 21:25:18] CVMFS is ok
[2025-11-20 21:25:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 21:25:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 21:25:18] Further information can be found at the LHC@home message board.
[2025-11-20 21:25:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 21:25:18] Checking for apptainer binary...
[2025-11-20 21:25:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 21:25:18] Running /usr/bin/apptainer --version
[2025-11-20 21:25:18] apptainer version 1.4.4-1.el9
[2025-11-20 21:25:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 21:25:18] c-210-30.aglt2.org
[2025-11-20 21:25:18] apptainer works
[2025-11-20 21:25:18] Set ATHENA_PROC_NUMBER=10
[2025-11-20 21:25:18] Set ATHENA_CORE_NUMBER=10
[2025-11-20 21:25:18] Starting ATLAS job with PandaID=6893857565
[2025-11-20 21:25:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 08:01:50]  *** The last 200 lines of the pilot log: ***
[2025-11-21 08:01:50] 2025-11-21 13:00:56,761 | INFO     | monitor loop #2652: job 0:6893857565 is in state 'finished'
[2025-11-21 08:01:50] 2025-11-21 13:00:56,762 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 08:01:50] 2025-11-21 13:00:57,730 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-21 08:01:50] 2025-11-21 13:00:57,736 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2599.8396000000002
[2025-11-21 08:01:50] 2025-11-21 13:00:57,743 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6893857565/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 08:01:50] 2025-11-21 13:00:57,743 | INFO     | extracted standard info from prmon json
[2025-11-21 08:01:50] 2025-11-21 13:00:57,743 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 08:01:50] 2025-11-21 13:00:57,744 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 08:01:50] 2025-11-21 13:00:57,755 | INFO     | fitting pss+swap vs Time
[2025-11-21 08:01:50] 2025-11-21 13:00:57,756 | INFO     | sum of square deviations: 75698398500.678
[2025-11-21 08:01:50] 2025-11-21 13:00:57,766 | INFO     | sum of deviations: 775507833917.5795
[2025-11-21 08:01:50] 2025-11-21 13:00:57,766 | INFO     | mean x: 1763711011.8384
[2025-11-21 08:01:50] 2025-11-21 13:00:57,767 | INFO     | mean y: 3131844.6592
[2025-11-21 08:01:50] 2025-11-21 13:00:57,767 | INFO     | intersect: -18065568861.54041
[2025-11-21 08:01:50] 2025-11-21 13:00:57,768 | INFO     | chi2: 6.021589333134683
[2025-11-21 08:01:50] 2025-11-21 13:00:57,769 | INFO     | sum of square deviations: 73896352343.64462
[2025-11-21 08:01:50] 2025-11-21 13:00:57,779 | INFO     | sum of deviations: 994379471745.9395
[2025-11-21 08:01:50] 2025-11-21 13:00:57,779 | INFO     | mean x: 1763710859.3532257
[2025-11-21 08:01:50] 2025-11-21 13:00:57,779 | INFO     | mean y: 3150351.6806451613
[2025-11-21 08:01:50] 2025-11-21 13:00:57,779 | INFO     | intersect: -23730062682.711723
[2025-11-21 08:01:50] 2025-11-21 13:00:57,780 | INFO     | chi2: 3.0153063676918075
[2025-11-21 08:01:50] 2025-11-21 13:00:57,780 | INFO     | current chi2=3.0153063676918075 (change=49.92507457956922 %)
[2025-11-21 08:01:50] 2025-11-21 13:00:57,781 | INFO     | sum of square deviations: 72123143936.33162
[2025-11-21 08:01:50] 2025-11-21 13:00:57,791 | INFO     | sum of deviations: 1068608809805.361
[2025-11-21 08:01:50] 2025-11-21 13:00:57,791 | INFO     | mean x: 1763710706.8682926
[2025-11-21 08:01:50] 2025-11-21 13:00:57,791 | INFO     | mean y: 3156720.2390243905
[2025-11-21 08:01:50] 2025-11-21 13:00:57,792 | INFO     | intersect: -26128771208.07308
[2025-11-21 08:01:50] 2025-11-21 13:00:57,792 | INFO     | chi2: 2.478935155684679
[2025-11-21 08:01:50] 2025-11-21 13:00:57,793 | INFO     | current chi2=2.478935155684679 (change=17.78828240321452 %)
[2025-11-21 08:01:50] 2025-11-21 13:00:57,793 | INFO     | right removable region: 614
[2025-11-21 08:01:50] 2025-11-21 13:00:57,794 | INFO     | sum of square deviations: 73895689337.34848
[2025-11-21 08:01:50] 2025-11-21 13:00:57,803 | INFO     | sum of deviations: 581345269648.7997
[2025-11-21 08:01:50] 2025-11-21 13:00:57,803 | INFO     | mean x: 1763711164.3516128
[2025-11-21 08:01:50] 2025-11-21 13:00:57,804 | INFO     | mean y: 3148241.4
[2025-11-21 08:01:50] 2025-11-21 13:00:57,804 | INFO     | intersect: -13872155604.02154
[2025-11-21 08:01:50] 2025-11-21 13:00:57,805 | INFO     | chi2: 3.6545709644449103
[2025-11-21 08:01:50] 2025-11-21 13:00:57,805 | INFO     | current chi2=3.6545709644449103 (change=39.30886411773226 %)
[2025-11-21 08:01:50] 2025-11-21 13:00:57,806 | INFO     | sum of square deviations: 72121969458.69281
[2025-11-21 08:01:50] 2025-11-21 13:00:57,816 | INFO     | sum of deviations: 539900563744.7708
[2025-11-21 08:01:50] 2025-11-21 13:00:57,816 | INFO     | mean x: 1763711316.8585365
[2025-11-21 08:01:50] 2025-11-21 13:00:57,816 | INFO     | mean y: 3151802.767479675
[2025-11-21 08:01:50] 2025-11-21 13:00:57,816 | INFO     | intersect: -13199881078.916876
[2025-11-21 08:01:50] 2025-11-21 13:00:57,817 | INFO     | chi2: 3.6155352096957554
[2025-11-21 08:01:50] 2025-11-21 13:00:57,817 | INFO     | current chi2=3.6155352096957554 (change=1.068135086961815 %)
[2025-11-21 08:01:50] 2025-11-21 13:00:57,817 | INFO     | left removable region: 20
[2025-11-21 08:01:50] 2025-11-21 13:00:57,818 | INFO     | sum of square deviations: 64983120475.0305
[2025-11-21 08:01:50] 2025-11-21 13:00:57,826 | INFO     | time since job start (38119s) is within the limit (172800.0s)
[2025-11-21 08:01:50] 2025-11-21 13:00:57,827 | INFO     | sum of deviations: 782165248702.3533
[2025-11-21 08:01:50] 2025-11-21 13:00:57,828 | INFO     | mean x: 1763711286.4040403
[2025-11-21 08:01:50] 2025-11-21 13:00:57,828 | INFO     | mean y: 3181070.936026936
[2025-11-21 08:01:50] 2025-11-21 13:00:57,828 | INFO     | intersect: -21225619068.0083
[2025-11-21 08:01:50] 2025-11-21 13:00:57,829 | INFO     | chi2: 0.03206263609864483
[2025-11-21 08:01:50] 2025-11-21 13:00:57,829 | INFO     | current memory leak: 12.04 B/s (using 594 data points, chi2=0.03)
[2025-11-21 08:01:50] 2025-11-21 13:00:57,830 | INFO     | could have reported an average CPU frequency of 2599 MHz (24 samples)
[2025-11-21 08:01:50] 2025-11-21 13:00:57,830 | INFO     | ..............................
[2025-11-21 08:01:50] 2025-11-21 13:00:57,830 | INFO     | . Timing measurements:
[2025-11-21 08:01:50] 2025-11-21 13:00:57,830 | INFO     | . get job = 0 s
[2025-11-21 08:01:50] 2025-11-21 13:00:57,830 | INFO     | . initial setup = 3 s
[2025-11-21 08:01:50] 2025-11-21 13:00:57,830 | INFO     | . payload setup = 11 s
[2025-11-21 08:01:50] 2025-11-21 13:00:57,831 | INFO     | . stage-in = 0 s
[2025-11-21 08:01:50] 2025-11-21 13:00:57,831 | INFO     | . payload execution = 38074 s
[2025-11-21 08:01:50] 2025-11-21 13:00:57,831 | INFO     | . stage-out = 3 s
[2025-11-21 08:01:50] 2025-11-21 13:00:57,831 | INFO     | . log creation = 0 s
[2025-11-21 08:01:50] 2025-11-21 13:00:57,831 | INFO     | ..............................
[2025-11-21 08:01:50] 2025-11-21 13:00:57,934 | INFO     | 
[2025-11-21 08:01:50] 2025-11-21 13:00:57,934 | INFO     | job summary report
[2025-11-21 08:01:50] 2025-11-21 13:00:57,934 | INFO     | --------------------------------------------------
[2025-11-21 08:01:50] 2025-11-21 13:00:57,934 | INFO     | PanDA job id: 6893857565
[2025-11-21 08:01:50] 2025-11-21 13:00:57,934 | INFO     | task id: 47523449
[2025-11-21 08:01:50] 2025-11-21 13:00:57,934 | INFO     | errors: (none)
[2025-11-21 08:01:50] 2025-11-21 13:00:57,935 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 08:01:50] 2025-11-21 13:00:57,935 | INFO     | pilot state: finished 
[2025-11-21 08:01:50] 2025-11-21 13:00:57,935 | INFO     | transexitcode: 0
[2025-11-21 08:01:50] 2025-11-21 13:00:57,935 | INFO     | exeerrorcode: 0
[2025-11-21 08:01:50] 2025-11-21 13:00:57,935 | INFO     | exeerrordiag: 
[2025-11-21 08:01:50] 2025-11-21 13:00:57,935 | INFO     | exitcode: 0
[2025-11-21 08:01:50] 2025-11-21 13:00:57,935 | INFO     | exitmsg: OK
[2025-11-21 08:01:50] 2025-11-21 13:00:57,935 | INFO     | cpuconsumptiontime: 287837 s
[2025-11-21 08:01:50] 2025-11-21 13:00:57,935 | INFO     | nevents: 1000
[2025-11-21 08:01:50] 2025-11-21 13:00:57,935 | INFO     | neventsw: 0
[2025-11-21 08:01:50] 2025-11-21 13:00:57,935 | INFO     | pid: 3151741
[2025-11-21 08:01:50] 2025-11-21 13:00:57,936 | INFO     | pgrp: 3151741
[2025-11-21 08:01:50] 2025-11-21 13:00:57,936 | INFO     | corecount: 10
[2025-11-21 08:01:50] 2025-11-21 13:00:57,936 | INFO     | event service: False
[2025-11-21 08:01:50] 2025-11-21 13:00:57,936 | INFO     | sizes: {0: 2298635, 1: 2298834, 8: 2299096, 12: 2299124, 38089: 2342320, 38094: 2351314, 38096: 2351498, 38101: 2351744}
[2025-11-21 08:01:50] 2025-11-21 13:00:57,936 | INFO     | --------------------------------------------------
[2025-11-21 08:01:50] 2025-11-21 13:00:57,936 | INFO     | 
[2025-11-21 08:01:50] 2025-11-21 13:00:57,936 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-21 08:01:50] 2025-11-21 13:00:57,950 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 08:01:50] 2025-11-21 13:00:57,951 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 08:01:50] 2025-11-21 13:00:57,951 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 08:01:50] 2025-11-21 13:00:57,951 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 08:01:50] 2025-11-21 13:00:57,951 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 08:01:50] 2025-11-21 13:00:57,951 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 08:01:50] 2025-11-21 13:00:57,951 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 08:01:50] 2025-11-21 13:00:57,951 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 08:01:50] 2025-11-21 13:00:57,951 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 08:01:50] 2025-11-21 13:00:57,951 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 08:01:50] 2025-11-21 13:00:57,952 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 08:01:50] 2025-11-21 13:00:57,952 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 08:01:50] 2025-11-21 13:00:57,952 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 08:01:50] 2025-11-21 13:00:57,952 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 08:01:50] 2025-11-21 13:00:57,952 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 08:01:50] 2025-11-21 13:00:57,952 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 08:01:50] 2025-11-21 13:00:57,952 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 08:01:50] 2025-11-21 13:00:57,952 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 08:01:50] 2025-11-21 13:00:57,952 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 08:01:50] 2025-11-21 13:00:57,952 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 08:01:50] 2025-11-21 13:00:57,953 | INFO     | job 6893857565 has completed (purged errors)
[2025-11-21 08:01:50] 2025-11-21 13:00:57,953 | INFO     | overall cleanup function is called
[2025-11-21 08:01:50] 2025-11-21 13:00:58,968 | INFO     | --- collectZombieJob: --- 10, [3151741]
[2025-11-21 08:01:50] 2025-11-21 13:00:58,968 | INFO     | zombie collector waiting for pid 3151741
[2025-11-21 08:01:50] 2025-11-21 13:00:58,969 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 08:01:50] 2025-11-21 13:00:58,969 | INFO     | collected zombie processes
[2025-11-21 08:01:50] 2025-11-21 13:00:58,969 | INFO     | will attempt to kill all subprocesses of pid=3151741
[2025-11-21 08:01:50] 2025-11-21 13:00:59,164 | INFO     | process IDs to be killed: [3151741] (in reverse order)
[2025-11-21 08:01:50] 2025-11-21 13:00:59,222 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 08:01:50] 2025-11-21 13:00:59,222 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 08:01:50] 2025-11-21 13:00:59,228 | INFO     | did not find any defunct processes belonging to 3151741
[2025-11-21 08:01:50] 2025-11-21 13:00:59,232 | INFO     | did not find any defunct processes belonging to 3151741
[2025-11-21 08:01:50] 2025-11-21 13:00:59,233 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 08:01:50] 2025-11-21 13:00:59,233 | INFO     | ready for new job
[2025-11-21 08:01:50] 2025-11-21 13:00:59,234 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 08:01:50] 2025-11-21 13:00:59,237 | INFO     | ***************************************
[2025-11-21 08:01:50] 2025-11-21 13:00:59,237 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 08:01:50] 2025-11-21 13:00:59,237 | INFO     | ***************************************
[2025-11-21 08:01:50] 2025-11-21 13:00:59,237 | INFO     | 
[2025-11-21 08:01:50] 2025-11-21 13:00:59,239 | INFO     | architecture information:
[2025-11-21 08:01:50] 2025-11-21 13:00:59,239 | INFO     | executing command: cat /etc/os-release
[2025-11-21 08:01:50] 2025-11-21 13:00:59,255 | INFO     | cat /etc/os-release:
[2025-11-21 08:01:50] NAME="CentOS Linux"
[2025-11-21 08:01:50] VERSION="7 (Core)"
[2025-11-21 08:01:50] ID="centos"
[2025-11-21 08:01:50] ID_LIKE="rhel fedora"
[2025-11-21 08:01:50] VERSION_ID="7"
[2025-11-21 08:01:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 08:01:50] ANSI_COLOR="0;31"
[2025-11-21 08:01:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 08:01:50] HOME_URL="https://www.centos.org/"
[2025-11-21 08:01:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 08:01:50] 
[2025-11-21 08:01:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 08:01:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 08:01:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 08:01:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 08:01:50] 
[2025-11-21 08:01:50] 2025-11-21 13:00:59,256 | INFO     | ***************************************
[2025-11-21 08:01:50] 2025-11-21 13:00:59,758 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-21 08:01:50] 2025-11-21 13:00:59,774 | INFO     | sufficient remaining disk space (48618274816 B)
[2025-11-21 08:01:50] 2025-11-21 13:00:59,774 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 08:01:50] 2025-11-21 13:00:59,774 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 08:01:50] 2025-11-21 13:00:59,775 | INFO     | update_server=False
[2025-11-21 08:01:50] 2025-11-21 13:00:59,775 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 08:01:50] 2025-11-21 13:00:59,775 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-21 08:01:50] 2025-11-21 13:00:59,776 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 08:01:50] 2025-11-21 13:00:59,776 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 08:01:50] 2025-11-21 13:00:59,776 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 08:01:50] 2025-11-21 13:00:59,775 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 08:01:50] 2025-11-21 13:00:59,775 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 08:01:50] 2025-11-21 13:00:59,775 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 08:01:50] 2025-11-21 13:00:59,882 | INFO     | all payload control threads have been joined
[2025-11-21 08:01:50] 2025-11-21 13:01:00,274 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 08:01:50] 2025-11-21 13:01:00,274 | INFO     | aborting loop
[2025-11-21 08:01:50] 2025-11-21 13:01:00,620 | INFO     | all job control threads have been joined
[2025-11-21 08:01:50] 2025-11-21 13:01:00,634 | INFO     | all data control threads have been joined
[2025-11-21 08:01:50] 2025-11-21 13:01:00,780 | INFO     | [job] retrieve thread has finished
[2025-11-21 08:01:50] 2025-11-21 13:01:00,781 | INFO     | [job] queue monitor thread has finished
[2025-11-21 08:01:50] 2025-11-21 13:01:00,887 | INFO     | [payload] control thread has finished
[2025-11-21 08:01:50] 2025-11-21 13:01:01,105 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 08:01:50] 2025-11-21 13:01:01,280 | INFO     | [job] job monitor thread has finished
[2025-11-21 08:01:50] 2025-11-21 13:01:01,441 | INFO     | [data] copytool_in thread has finished
[2025-11-21 08:01:50] 2025-11-21 13:01:01,488 | INFO     | [payload] failed_post thread has finished
[2025-11-21 08:01:50] 2025-11-21 13:01:01,624 | INFO     | [job] control thread has finished
[2025-11-21 08:01:50] 2025-11-21 13:01:01,637 | INFO     | [job] validate thread has finished
[2025-11-21 08:01:50] 2025-11-21 13:01:01,638 | INFO     | [data] control thread has finished
[2025-11-21 08:01:50] 2025-11-21 13:01:01,781 | INFO     | [data] copytool_out thread has finished
[2025-11-21 08:01:50] 2025-11-21 13:01:02,050 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 08:01:50] 2025-11-21 13:01:02,097 | INFO     | [payload] validate_post thread has finished
[2025-11-21 08:01:50] 2025-11-21 13:01:02,223 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 08:01:50] 2025-11-21 13:01:03,782 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 08:01:50] 2025-11-21 13:01:09,887 | INFO     | job.realtimelogging is not enabled
[2025-11-21 08:01:50] 2025-11-21 13:01:10,891 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 08:01:50] 2025-11-21 13:01:43,626 | INFO     | [monitor] cgroup control has ended
[2025-11-21 08:01:50] 2025-11-21 13:01:45,209 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140173386774336)>', '<ExcThread(monitor, started 140172599473920)>']
[2025-11-21 08:01:50] 2025-11-21 13:01:46,002 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 08:01:50] 2025-11-21 13:01:46,003 | INFO     | [monitor] control thread has ended
[2025-11-21 08:01:50] 2025-11-21 13:01:50,235 | INFO     | all workflow threads have been joined
[2025-11-21 08:01:50] 2025-11-21 13:01:50,235 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 08:01:50] 2025-11-21 13:01:50,236 | INFO     | traces error code: 0
[2025-11-21 08:01:50] 2025-11-21 13:01:50,236 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 08:01:50] 2025-11-21 13:01:50,328 [wrapper] ==== pilot stdout END ====
[2025-11-21 08:01:50] 2025-11-21 13:01:50,330 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 08:01:50] 2025-11-21 13:01:50,333 [wrapper] pilotpid: 3144072
[2025-11-21 08:01:50] 2025-11-21 13:01:50,335 [wrapper] Pilot exit status: 0
[2025-11-21 08:01:50] 2025-11-21 13:01:50,345 [wrapper] pandaids: 6893857565
[2025-11-21 08:01:50] 2025-11-21 13:01:50,391 [wrapper] cleanup supervisor_pilot 4007256 3144073
[2025-11-21 08:01:50] 2025-11-21 13:01:50,394 [wrapper] Test setup, not cleaning
[2025-11-21 08:01:50] 2025-11-21 13:01:50,396 [wrapper] apfmon messages muted
[2025-11-21 08:01:50] 2025-11-21 13:01:50,398 [wrapper] ==== wrapper stdout END ====
[2025-11-21 08:01:50] 2025-11-21 13:01:50,400 [wrapper] ==== wrapper stderr END ====
[2025-11-21 08:01:50]  *** Error codes and diagnostics ***
[2025-11-21 08:01:50]     "exeErrorCode": 0,
[2025-11-21 08:01:50]     "exeErrorDiag": "",
[2025-11-21 08:01:50]     "pilotErrorCode": 0,
[2025-11-21 08:01:50]     "pilotErrorDiag": "",
[2025-11-21 08:01:50]  *** Listing of results directory ***
[2025-11-21 08:01:50] total 1301364
[2025-11-21 08:01:50] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 08:01 pilot3.tar.gz
[2025-11-21 08:01:50] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 08:05 queuedata.json
[2025-11-21 08:01:50] -rwx------. 1 boincer umatlas     36292 Nov 20 08:05 runpilot2-wrapper.sh
[2025-11-21 08:01:50] -rw-r--r--. 1 boincer umatlas       100 Nov 20 21:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 08:01:50] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 20 21:25 run_atlas
[2025-11-21 08:01:50] -rw-r--r--. 1 boincer umatlas       105 Nov 20 21:25 job.xml
[2025-11-21 08:01:50] -rw-r--r--. 2 boincer umatlas 407871834 Nov 20 21:25 EVNT.47493127._000491.pool.root.1
[2025-11-21 08:01:50] -rw-r--r--. 2 boincer umatlas     15847 Nov 20 21:25 start_atlas.sh
[2025-11-21 08:01:50] drwxrwx--x. 2 boincer umatlas      4096 Nov 20 21:25 shared
[2025-11-21 08:01:50] -rw-r--r--. 2 boincer umatlas    590098 Nov 20 21:25 input.tar.gz
[2025-11-21 08:01:50] -rw-r--r--. 1 boincer umatlas         0 Nov 20 21:25 boinc_lockfile
[2025-11-21 08:01:50] -rw-r--r--. 1 boincer umatlas      2785 Nov 20 21:25 pandaJob.out
[2025-11-21 08:01:50] -rw-------. 1 boincer umatlas        57 Nov 20 21:25 setup.sh.local
[2025-11-21 08:01:50] -rw-------. 1 boincer umatlas    989817 Nov 20 21:25 agis_schedconf.cvmfs.json
[2025-11-21 08:01:50] drwx------. 5 boincer umatlas      4096 Nov 20 21:25 pilot3
[2025-11-21 08:01:50] -rw-r--r--. 1 boincer umatlas       533 Nov 21 07:51 boinc_task_state.xml
[2025-11-21 08:01:50] -rw-r--r--. 1 boincer umatlas      6663 Nov 21 07:57 init_data.xml
[2025-11-21 08:01:50] -rw-------. 1 boincer umatlas        95 Nov 21 08:00 pilot_heartbeat.json
[2025-11-21 08:01:50] -rw-------. 1 boincer umatlas 906011512 Nov 21 08:00 HITS.47523449._004902.pool.root.1
[2025-11-21 08:01:50] -rw-------. 1 boincer umatlas      1057 Nov 21 08:00 memory_monitor_summary.json
[2025-11-21 08:01:50] -rw-------. 1 boincer umatlas   1526164 Nov 21 08:00 agis_ddmendpoints.agis.ALL.json
[2025-11-21 08:01:50] -rw-------. 1 boincer umatlas   2120923 Nov 21 08:00 log.47523449._004902.job.log.tgz.1
[2025-11-21 08:01:50] -rw-------. 1 boincer umatlas      8632 Nov 21 08:00 heartbeat.json
[2025-11-21 08:01:50] -rw-r--r--. 1 boincer umatlas        29 Nov 21 08:01 wrapper_checkpoint.txt
[2025-11-21 08:01:50] -rw-r--r--. 1 boincer umatlas      8192 Nov 21 08:01 boinc_mmap_file
[2025-11-21 08:01:50] -rw-------. 1 boincer umatlas      4624 Nov 21 08:01 pilotlog.txt
[2025-11-21 08:01:50] -rw-------. 1 boincer umatlas   5268651 Nov 21 08:01 log.47523449._004902.job.log.1
[2025-11-21 08:01:50] -rw-------. 1 boincer umatlas       353 Nov 21 08:01 output.list
[2025-11-21 08:01:50] -rw-r--r--. 1 boincer umatlas       620 Nov 21 08:01 runtime_log
[2025-11-21 08:01:50] -rw-------. 1 boincer umatlas   7413760 Nov 21 08:01 result.tar.gz
[2025-11-21 08:01:50] -rw-r--r--. 1 boincer umatlas      9345 Nov 21 08:01 runtime_log.err
[2025-11-21 08:01:50] -rw-------. 1 boincer umatlas       661 Nov 21 08:01 qAGMDmQXJg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmzsHKDm3uR05n.diag
[2025-11-21 08:01:50] -rw-r--r--. 1 boincer umatlas     21240 Nov 21 08:01 stderr.txt
[2025-11-21 08:01:50] HITS file was successfully produced:
[2025-11-21 08:01:50] -rw-------. 1 boincer umatlas 906011512 Nov 21 08:00 shared/HITS.pool.root.1
[2025-11-21 08:01:50]  *** Contents of shared directory: ***
[2025-11-21 08:01:50] total 1290940
[2025-11-21 08:01:50] -rw-r--r--. 2 boincer umatlas 407871834 Nov 20 21:25 ATLAS.root_0
[2025-11-21 08:01:50] -rw-r--r--. 2 boincer umatlas     15847 Nov 20 21:25 start_atlas.sh
[2025-11-21 08:01:50] -rw-r--r--. 2 boincer umatlas    590098 Nov 20 21:25 input.tar.gz
[2025-11-21 08:01:50] -rw-------. 1 boincer umatlas 906011512 Nov 21 08:00 HITS.pool.root.1
[2025-11-21 08:01:50] -rw-------. 1 boincer umatlas   7413760 Nov 21 08:01 result.tar.gz
08:01:52 (3140405): run_atlas exited; CPU time 288044.893547
08:01:52 (3140405): called boinc_finish(0)

</stderr_txt>
]]>

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