Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:48:15 (514328): wrapper (7.7.26015): starting
18:48:15 (514328): wrapper: running run_atlas (--nthreads 4)
[2025-11-21 18:48:15] Arguments: --nthreads 4
[2025-11-21 18:48:15] Threads: 4
[2025-11-21 18:48:15] Checking for CVMFS
[2025-11-21 18:48:15] No cvmfs_config command found, will try listing directly
[2025-11-21 18:48:15] CVMFS is ok
[2025-11-21 18:48:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 18:48:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 18:48:15] Further information can be found at the LHC@home message board.
[2025-11-21 18:48:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 18:48:15] Checking for apptainer binary...
[2025-11-21 18:48:15] which: no apptainer in ((null))
[2025-11-21 18:48:15] apptainer is not installed, using version from CVMFS
[2025-11-21 18:48:15] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 18:48:15] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot60/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut09.grid.cesnet.cz
[2025-11-21 18:48:15] apptainer works
[2025-11-21 18:48:15] Set ATHENA_PROC_NUMBER=4
[2025-11-21 18:48:15] Set ATHENA_CORE_NUMBER=4
[2025-11-21 18:48:15] Starting ATLAS job with PandaID=6893858254
[2025-11-21 18:48:15] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot60/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 11:54:12]  *** The last 200 lines of the pilot log: ***
[2025-11-22 11:54:12] 2025-11-22 10:53:15,424 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 11:54:12] 2025-11-22 10:53:15,470 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-22 11:54:12] 2025-11-22 10:53:15,480 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2749.494
[2025-11-22 11:54:12] 2025-11-22 10:53:15,492 | INFO     | using path: /scratch/boinc/var/slot60/slots/0/PanDA_Pilot-6893858254/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 11:54:12] 2025-11-22 10:53:15,492 | INFO     | extracted standard info from prmon json
[2025-11-22 11:54:12] 2025-11-22 10:53:15,493 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 11:54:12] 2025-11-22 10:53:15,493 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 11:54:12] 2025-11-22 10:53:15,510 | INFO     | fitting pss+swap vs Time
[2025-11-22 11:54:12] 2025-11-22 10:53:15,512 | INFO     | sum of square deviations: 317584715532.0
[2025-11-22 11:54:12] 2025-11-22 10:53:15,532 | INFO     | sum of deviations: 1149215744112.4998
[2025-11-22 11:54:12] 2025-11-22 10:53:15,532 | INFO     | mean x: 1763778049.5
[2025-11-22 11:54:12] 2025-11-22 10:53:15,532 | INFO     | mean y: 2290406.5029761903
[2025-11-22 11:54:12] 2025-11-22 10:53:15,532 | INFO     | intersect: -6380137350.481438
[2025-11-22 11:54:12] 2025-11-22 10:53:15,533 | INFO     | chi2: 4.401136305499721
[2025-11-22 11:54:12] 2025-11-22 10:53:15,535 | INFO     | sum of square deviations: 312882152942.0
[2025-11-22 11:54:12] 2025-11-22 10:53:15,555 | INFO     | sum of deviations: 1373646205677.0002
[2025-11-22 11:54:12] 2025-11-22 10:53:15,555 | INFO     | mean x: 1763777897.0
[2025-11-22 11:54:12] 2025-11-22 10:53:15,555 | INFO     | mean y: 2297678.8015952143
[2025-11-22 11:54:12] 2025-11-22 10:53:15,555 | INFO     | intersect: -7741214672.700706
[2025-11-22 11:54:12] 2025-11-22 10:53:15,557 | INFO     | chi2: 1.9925901531101575
[2025-11-22 11:54:12] 2025-11-22 10:53:15,557 | INFO     | current chi2=1.9925901531101575 (change=54.7255523392859 %)
[2025-11-22 11:54:12] 2025-11-22 10:53:15,558 | INFO     | sum of square deviations: 308226242389.5
[2025-11-22 11:54:12] 2025-11-22 10:53:15,578 | INFO     | sum of deviations: 1363684642187.5
[2025-11-22 11:54:12] 2025-11-22 10:53:15,578 | INFO     | mean x: 1763777744.5
[2025-11-22 11:54:12] 2025-11-22 10:53:15,578 | INFO     | mean y: 2297351.748496994
[2025-11-22 11:54:12] 2025-11-22 10:53:15,579 | INFO     | intersect: -7801180391.614133
[2025-11-22 11:54:12] 2025-11-22 10:53:15,580 | INFO     | chi2: 1.984479208639129
[2025-11-22 11:54:12] 2025-11-22 10:53:15,580 | INFO     | current chi2=1.984479208639129 (change=0.40705533239580133 %)
[2025-11-22 11:54:12] 2025-11-22 10:53:15,580 | INFO     | right removable region: 997
[2025-11-22 11:54:12] 2025-11-22 10:53:15,581 | INFO     | sum of square deviations: 312882152942.0
[2025-11-22 11:54:12] 2025-11-22 10:53:15,601 | INFO     | sum of deviations: 954381270234.0
[2025-11-22 11:54:12] 2025-11-22 10:53:15,601 | INFO     | mean x: 1763778202.0
[2025-11-22 11:54:12] 2025-11-22 10:53:15,601 | INFO     | mean y: 2296715.668993021
[2025-11-22 11:54:12] 2025-11-22 10:53:15,601 | INFO     | intersect: -5377738115.361598
[2025-11-22 11:54:12] 2025-11-22 10:53:15,602 | INFO     | chi2: 2.530791773197555
[2025-11-22 11:54:12] 2025-11-22 10:53:15,602 | INFO     | current chi2=2.530791773197555 (change=42.49685541356575 %)
[2025-11-22 11:54:12] 2025-11-22 10:53:15,604 | INFO     | sum of square deviations: 308226242389.5
[2025-11-22 11:54:12] 2025-11-22 10:53:15,623 | INFO     | sum of deviations: 913101527804.9998
[2025-11-22 11:54:12] 2025-11-22 10:53:15,624 | INFO     | mean x: 1763778354.5
[2025-11-22 11:54:12] 2025-11-22 10:53:15,624 | INFO     | mean y: 2298067.336673347
[2025-11-22 11:54:12] 2025-11-22 10:53:15,624 | INFO     | intersect: -5222788212.527087
[2025-11-22 11:54:12] 2025-11-22 10:53:15,625 | INFO     | chi2: 2.500884355944228
[2025-11-22 11:54:12] 2025-11-22 10:53:15,625 | INFO     | current chi2=2.500884355944228 (change=1.1817415233470705 %)
[2025-11-22 11:54:12] 2025-11-22 10:53:15,625 | INFO     | left removable region: 20
[2025-11-22 11:54:12] 2025-11-22 10:53:15,627 | INFO     | sum of square deviations: 289175609848.0
[2025-11-22 11:54:12] 2025-11-22 10:53:15,645 | INFO     | sum of deviations: 1073272276767.9999
[2025-11-22 11:54:12] 2025-11-22 10:53:15,645 | INFO     | mean x: 1763778324.0
[2025-11-22 11:54:12] 2025-11-22 10:53:15,646 | INFO     | mean y: 2306819.6038894574
[2025-11-22 11:54:12] 2025-11-22 10:53:15,646 | INFO     | intersect: -6543938136.907333
[2025-11-22 11:54:12] 2025-11-22 10:53:15,647 | INFO     | chi2: 0.061029946633074525
[2025-11-22 11:54:12] 2025-11-22 10:53:15,647 | INFO     | current memory leak: 3.71 B/s (using 977 data points, chi2=0.06)
[2025-11-22 11:54:12] 2025-11-22 10:53:15,648 | INFO     | could have reported an average CPU frequency of 2609 MHz (37 samples)
[2025-11-22 11:54:12] 2025-11-22 10:53:15,648 | INFO     | ..............................
[2025-11-22 11:54:12] 2025-11-22 10:53:15,648 | INFO     | . Timing measurements:
[2025-11-22 11:54:12] 2025-11-22 10:53:15,649 | INFO     | . get job = 0 s
[2025-11-22 11:54:12] 2025-11-22 10:53:15,649 | INFO     | . initial setup = 1 s
[2025-11-22 11:54:12] 2025-11-22 10:53:15,649 | INFO     | . payload setup = 7 s
[2025-11-22 11:54:12] 2025-11-22 10:53:15,649 | INFO     | . stage-in = 0 s
[2025-11-22 11:54:12] 2025-11-22 10:53:15,649 | INFO     | . payload execution = 61454 s
[2025-11-22 11:54:12] 2025-11-22 10:53:15,649 | INFO     | . stage-out = 2 s
[2025-11-22 11:54:12] 2025-11-22 10:53:15,649 | INFO     | . log creation = 0 s
[2025-11-22 11:54:12] 2025-11-22 10:53:15,649 | INFO     | ..............................
[2025-11-22 11:54:12] 2025-11-22 10:53:15,747 | INFO     | 
[2025-11-22 11:54:12] 2025-11-22 10:53:15,747 | INFO     | job summary report
[2025-11-22 11:54:12] 2025-11-22 10:53:15,747 | INFO     | --------------------------------------------------
[2025-11-22 11:54:12] 2025-11-22 10:53:15,747 | INFO     | PanDA job id: 6893858254
[2025-11-22 11:54:12] 2025-11-22 10:53:15,748 | INFO     | task id: 47523449
[2025-11-22 11:54:12] 2025-11-22 10:53:15,748 | INFO     | errors: (none)
[2025-11-22 11:54:12] 2025-11-22 10:53:15,748 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 11:54:12] 2025-11-22 10:53:15,748 | INFO     | pilot state: finished 
[2025-11-22 11:54:12] 2025-11-22 10:53:15,748 | INFO     | transexitcode: 0
[2025-11-22 11:54:12] 2025-11-22 10:53:15,748 | INFO     | exeerrorcode: 0
[2025-11-22 11:54:12] 2025-11-22 10:53:15,748 | INFO     | exeerrordiag: 
[2025-11-22 11:54:12] 2025-11-22 10:53:15,748 | INFO     | exitcode: 0
[2025-11-22 11:54:12] 2025-11-22 10:53:15,748 | INFO     | exitmsg: OK
[2025-11-22 11:54:12] 2025-11-22 10:53:15,748 | INFO     | cpuconsumptiontime: 244023 s
[2025-11-22 11:54:12] 2025-11-22 10:53:15,748 | INFO     | nevents: 1000
[2025-11-22 11:54:12] 2025-11-22 10:53:15,749 | INFO     | neventsw: 0
[2025-11-22 11:54:12] 2025-11-22 10:53:15,749 | INFO     | pid: 525496
[2025-11-22 11:54:12] 2025-11-22 10:53:15,749 | INFO     | pgrp: 525496
[2025-11-22 11:54:12] 2025-11-22 10:53:15,749 | INFO     | corecount: 4
[2025-11-22 11:54:12] 2025-11-22 10:53:15,749 | INFO     | event service: False
[2025-11-22 11:54:12] 2025-11-22 10:53:15,749 | INFO     | sizes: {0: 2298540, 1: 2298795, 6: 2299057, 12: 2299085, 61464: 2351737, 61467: 2360937, 61472: 2361127}
[2025-11-22 11:54:12] 2025-11-22 10:53:15,749 | INFO     | --------------------------------------------------
[2025-11-22 11:54:12] 2025-11-22 10:53:15,749 | INFO     | 
[2025-11-22 11:54:12] 2025-11-22 10:53:15,749 | INFO     | executing command: ls -lF /scratch/boinc/var/slot60/slots/0
[2025-11-22 11:54:12] 2025-11-22 10:53:15,770 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 11:54:12] 2025-11-22 10:53:15,770 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 11:54:12] 2025-11-22 10:53:15,770 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 11:54:12] 2025-11-22 10:53:15,770 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 11:54:12] 2025-11-22 10:53:15,770 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 11:54:12] 2025-11-22 10:53:15,771 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 11:54:12] 2025-11-22 10:53:15,771 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 11:54:12] 2025-11-22 10:53:15,771 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 11:54:12] 2025-11-22 10:53:15,771 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 11:54:12] 2025-11-22 10:53:15,771 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 11:54:12] 2025-11-22 10:53:15,771 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 11:54:12] 2025-11-22 10:53:15,771 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 11:54:12] 2025-11-22 10:53:15,771 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 11:54:12] 2025-11-22 10:53:15,771 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 11:54:12] 2025-11-22 10:53:15,771 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 11:54:12] 2025-11-22 10:53:15,771 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 11:54:12] 2025-11-22 10:53:15,771 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 11:54:12] 2025-11-22 10:53:15,771 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 11:54:12] 2025-11-22 10:53:15,772 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 11:54:12] 2025-11-22 10:53:15,772 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 11:54:12] 2025-11-22 10:53:15,772 | INFO     | job 6893858254 has completed (purged errors)
[2025-11-22 11:54:12] 2025-11-22 10:53:15,772 | INFO     | overall cleanup function is called
[2025-11-22 11:54:12] 2025-11-22 10:53:16,785 | INFO     | --- collectZombieJob: --- 10, [525496]
[2025-11-22 11:54:12] 2025-11-22 10:53:16,785 | INFO     | zombie collector waiting for pid 525496
[2025-11-22 11:54:12] 2025-11-22 10:53:16,785 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 11:54:12] 2025-11-22 10:53:16,785 | INFO     | collected zombie processes
[2025-11-22 11:54:12] 2025-11-22 10:53:16,785 | INFO     | will attempt to kill all subprocesses of pid=525496
[2025-11-22 11:54:12] 2025-11-22 10:53:17,197 | INFO     | process IDs to be killed: [525496] (in reverse order)
[2025-11-22 11:54:12] 2025-11-22 10:53:17,311 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 11:54:12] 2025-11-22 10:53:17,311 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 11:54:12] 2025-11-22 10:53:17,325 | INFO     | did not find any defunct processes belonging to 525496
[2025-11-22 11:54:12] 2025-11-22 10:53:17,337 | INFO     | did not find any defunct processes belonging to 525496
[2025-11-22 11:54:12] 2025-11-22 10:53:17,339 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 11:54:12] 2025-11-22 10:53:17,339 | INFO     | ready for new job
[2025-11-22 11:54:12] 2025-11-22 10:53:17,339 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 11:54:12] 2025-11-22 10:53:17,344 | INFO     | ***************************************
[2025-11-22 11:54:12] 2025-11-22 10:53:17,345 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 11:54:12] 2025-11-22 10:53:17,345 | INFO     | ***************************************
[2025-11-22 11:54:12] 2025-11-22 10:53:17,345 | INFO     | 
[2025-11-22 11:54:12] 2025-11-22 10:53:17,349 | INFO     | architecture information:
[2025-11-22 11:54:12] 2025-11-22 10:53:17,350 | INFO     | executing command: cat /etc/os-release
[2025-11-22 11:54:12] 2025-11-22 10:53:17,365 | INFO     | cat /etc/os-release:
[2025-11-22 11:54:12] NAME="CentOS Linux"
[2025-11-22 11:54:12] VERSION="7 (Core)"
[2025-11-22 11:54:12] ID="centos"
[2025-11-22 11:54:12] ID_LIKE="rhel fedora"
[2025-11-22 11:54:12] VERSION_ID="7"
[2025-11-22 11:54:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 11:54:12] ANSI_COLOR="0;31"
[2025-11-22 11:54:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 11:54:12] HOME_URL="https://www.centos.org/"
[2025-11-22 11:54:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 11:54:12] 
[2025-11-22 11:54:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 11:54:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 11:54:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 11:54:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 11:54:12] 
[2025-11-22 11:54:12] 2025-11-22 10:53:17,365 | INFO     | ***************************************
[2025-11-22 11:54:12] 2025-11-22 10:53:17,866 | INFO     | executing command: df -mP /scratch/boinc/var/slot60/slots/0
[2025-11-22 11:54:12] 2025-11-22 10:53:17,882 | INFO     | sufficient remaining disk space (662493462528 B)
[2025-11-22 11:54:12] 2025-11-22 10:53:17,882 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 11:54:12] 2025-11-22 10:53:17,883 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 11:54:12] 2025-11-22 10:53:17,883 | INFO     | update_server=False
[2025-11-22 11:54:12] 2025-11-22 10:53:17,883 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 11:54:12] 2025-11-22 10:53:17,883 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 11:54:12] 2025-11-22 10:53:17,926 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-22 11:54:12] 2025-11-22 10:53:17,926 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-22 11:54:12] 2025-11-22 10:53:17,927 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 11:54:12] 2025-11-22 10:53:17,927 | INFO     | will abort loop
[2025-11-22 11:54:12] 2025-11-22 10:53:18,735 | INFO     | all data control threads have been joined
[2025-11-22 11:54:12] 2025-11-22 10:53:18,841 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 11:54:12] 2025-11-22 10:53:18,888 | INFO     | [job] retrieve thread has finished
[2025-11-22 11:54:12] 2025-11-22 10:53:18,901 | INFO     | all payload control threads have been joined
[2025-11-22 11:54:12] 2025-11-22 10:53:18,930 | INFO     | [job] job monitor thread has finished
[2025-11-22 11:54:12] 2025-11-22 10:53:19,058 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 11:54:12] 2025-11-22 10:53:19,192 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 11:54:12] 2025-11-22 10:53:19,268 | INFO     | all job control threads have been joined
[2025-11-22 11:54:12] 2025-11-22 10:53:19,325 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 11:54:12] 2025-11-22 10:53:19,352 | INFO     | [data] copytool_in thread has finished
[2025-11-22 11:54:12] 2025-11-22 10:53:19,581 | INFO     | [job] validate thread has finished
[2025-11-22 11:54:12] 2025-11-22 10:53:19,686 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 11:54:12] 2025-11-22 10:53:19,737 | INFO     | [data] control thread has finished
[2025-11-22 11:54:12] 2025-11-22 10:53:19,907 | INFO     | [payload] control thread has finished
[2025-11-22 11:54:12] 2025-11-22 10:53:20,273 | INFO     | [job] control thread has finished
[2025-11-22 11:54:12] 2025-11-22 10:53:20,470 | INFO     | [payload] failed_post thread has finished
[2025-11-22 11:54:12] 2025-11-22 10:53:20,474 | INFO     | [payload] validate_post thread has finished
[2025-11-22 11:54:12] 2025-11-22 10:53:20,757 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 11:54:12] 2025-11-22 10:53:20,846 | INFO     | [data] copytool_out thread has finished
[2025-11-22 11:54:12] 2025-11-22 10:53:21,762 | INFO     | [job] queue monitor thread has finished
[2025-11-22 11:54:12] 2025-11-22 10:53:21,889 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 11:54:12] 2025-11-22 10:53:48,640 | INFO     | PID=518088 has CPU usage=9.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-22 11:54:12] 2025-11-22 10:53:48,640 | INFO     | .. there are 4 such processes running
[2025-11-22 11:54:12] 2025-11-22 10:53:48,641 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 11:54:12] 2025-11-22 10:53:48,641 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 11:54:12] 2025-11-22 10:53:48,641 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 11:54:12] 2025-11-22 10:54:05,241 | INFO     | [monitor] cgroup control has ended
[2025-11-22 11:54:12] 2025-11-22 10:54:07,063 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22943268214592)>', '<ExcThread(monitor, started 22943031592704)>']
[2025-11-22 11:54:12] 2025-11-22 10:54:07,713 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 11:54:12] 2025-11-22 10:54:07,713 | INFO     | [monitor] control thread has ended
[2025-11-22 11:54:12] 2025-11-22 10:54:12,088 | INFO     | all workflow threads have been joined
[2025-11-22 11:54:12] 2025-11-22 10:54:12,088 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 11:54:12] 2025-11-22 10:54:12,088 | INFO     | traces error code: 0
[2025-11-22 11:54:12] 2025-11-22 10:54:12,088 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 11:54:12] 2025-11-22 10:54:12,244 [wrapper] ==== pilot stdout END ====
[2025-11-22 11:54:12] 2025-11-22 10:54:12,247 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 11:54:12] 2025-11-22 10:54:12,250 [wrapper] pilotpid: 518088
[2025-11-22 11:54:12] 2025-11-22 10:54:12,252 [wrapper] Pilot exit status: 0
[2025-11-22 11:54:12] 2025-11-22 10:54:12,262 [wrapper] pandaids: 6893858254
[2025-11-22 11:54:12] 2025-11-22 10:54:12,339 [wrapper] cleanup supervisor_pilot 1298931 518089
[2025-11-22 11:54:12] 2025-11-22 10:54:12,342 [wrapper] Test setup, not cleaning
[2025-11-22 11:54:12] 2025-11-22 10:54:12,346 [wrapper] apfmon messages muted
[2025-11-22 11:54:12] 2025-11-22 10:54:12,348 [wrapper] ==== wrapper stdout END ====
[2025-11-22 11:54:12] 2025-11-22 10:54:12,351 [wrapper] ==== wrapper stderr END ====
[2025-11-22 11:54:12]  *** Error codes and diagnostics ***
[2025-11-22 11:54:12]     "exeErrorCode": 0,
[2025-11-22 11:54:12]     "exeErrorDiag": "",
[2025-11-22 11:54:12]     "pilotErrorCode": 0,
[2025-11-22 11:54:12]     "pilotErrorDiag": "",
[2025-11-22 11:54:12]  *** Listing of results directory ***
[2025-11-22 11:54:12] total 1318704
[2025-11-22 11:54:12] -rw-r--r-- 1 boinc boinc    576529 Nov 20 14:12 pilot3.tar.gz
[2025-11-22 11:54:12] -rw-r--r-- 1 boinc boinc      5112 Nov 20 14:14 queuedata.json
[2025-11-22 11:54:12] -rwx------ 1 boinc boinc     36292 Nov 20 14:15 runpilot2-wrapper.sh
[2025-11-22 11:54:12] -rw-r--r-- 1 boinc boinc       100 Nov 21 18:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 11:54:12] -rwxr-xr-x 1 boinc boinc      7986 Nov 21 18:48 run_atlas
[2025-11-22 11:54:12] -rw-r--r-- 1 boinc boinc       105 Nov 21 18:48 job.xml
[2025-11-22 11:54:12] -rw-r--r-- 1 boinc boinc      6634 Nov 21 18:48 init_data.xml
[2025-11-22 11:54:12] -rw-r--r-- 2 boinc boinc 410473063 Nov 21 18:48 EVNT.47493127._000508.pool.root.1
[2025-11-22 11:54:12] -rw-r--r-- 2 boinc boinc     15847 Nov 21 18:48 start_atlas.sh
[2025-11-22 11:54:12] drwxrwx--x 2 boinc boinc      4096 Nov 21 18:48 shared
[2025-11-22 11:54:12] -rw-r--r-- 2 boinc boinc    590100 Nov 21 18:48 input.tar.gz
[2025-11-22 11:54:12] -rw-r--r-- 1 boinc boinc         0 Nov 21 18:48 boinc_lockfile
[2025-11-22 11:54:12] -rw-r--r-- 1 boinc boinc      2785 Nov 21 18:48 pandaJob.out
[2025-11-22 11:54:12] -rw------- 1 boinc boinc    989817 Nov 21 18:48 agis_schedconf.cvmfs.json
[2025-11-22 11:54:12] drwx------ 5 boinc boinc      4096 Nov 21 18:48 pilot3
[2025-11-22 11:54:12] -rw-r--r-- 1 boinc boinc       531 Nov 22 11:47 boinc_task_state.xml
[2025-11-22 11:54:12] -rw------- 1 boinc boinc 915229448 Nov 22 11:52 HITS.47523449._005073.pool.root.1
[2025-11-22 11:54:12] -rw------- 1 boinc boinc      1043 Nov 22 11:53 memory_monitor_summary.json
[2025-11-22 11:54:12] -rw------- 1 boinc boinc        95 Nov 22 11:53 pilot_heartbeat.json
[2025-11-22 11:54:12] -rw------- 1 boinc boinc   1526164 Nov 22 11:53 agis_ddmendpoints.agis.ALL.json
[2025-11-22 11:54:12] -rw------- 1 boinc boinc   1739564 Nov 22 11:53 log.47523449._005073.job.log.tgz.1
[2025-11-22 11:54:12] -rw------- 1 boinc boinc      8629 Nov 22 11:53 heartbeat.json
[2025-11-22 11:54:12] -rw-r--r-- 1 boinc boinc        28 Nov 22 11:54 wrapper_checkpoint.txt
[2025-11-22 11:54:12] -rw------- 1 boinc boinc      5018 Nov 22 11:54 pilotlog.txt
[2025-11-22 11:54:12] -rw------- 1 boinc boinc   8622202 Nov 22 11:54 log.47523449._005073.job.log.1
[2025-11-22 11:54:12] -rw------- 1 boinc boinc       353 Nov 22 11:54 output.list
[2025-11-22 11:54:12] -rw-r--r-- 1 boinc boinc       620 Nov 22 11:54 runtime_log
[2025-11-22 11:54:12] -rw------- 1 boinc boinc  10383360 Nov 22 11:54 result.tar.gz
[2025-11-22 11:54:12] -rw-r--r-- 1 boinc boinc      9206 Nov 22 11:54 runtime_log.err
[2025-11-22 11:54:12] -rw------- 1 boinc boinc       670 Nov 22 11:54 XfPLDmLgJg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmwtHKDmIkKfjm.diag
[2025-11-22 11:54:12] -rw-r--r-- 1 boinc boinc      8192 Nov 22 11:54 boinc_mmap_file
[2025-11-22 11:54:12] -rw-r--r-- 1 boinc boinc     21013 Nov 22 11:54 stderr.txt
[2025-11-22 11:54:12] HITS file was successfully produced:
[2025-11-22 11:54:12] -rw------- 1 boinc boinc 915229448 Nov 22 11:52 shared/HITS.pool.root.1
[2025-11-22 11:54:12]  *** Contents of shared directory: ***
[2025-11-22 11:54:12] total 1305380
[2025-11-22 11:54:12] -rw-r--r-- 2 boinc boinc 410473063 Nov 21 18:48 ATLAS.root_0
[2025-11-22 11:54:12] -rw-r--r-- 2 boinc boinc     15847 Nov 21 18:48 start_atlas.sh
[2025-11-22 11:54:12] -rw-r--r-- 2 boinc boinc    590100 Nov 21 18:48 input.tar.gz
[2025-11-22 11:54:12] -rw------- 1 boinc boinc 915229448 Nov 22 11:52 HITS.pool.root.1
[2025-11-22 11:54:12] -rw------- 1 boinc boinc  10383360 Nov 22 11:54 result.tar.gz
11:55:44 (514328): run_atlas exited; CPU time 246302.512445
11:55:44 (514328): called boinc_finish(0)

</stderr_txt>
]]>

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