Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
19:04:04 (922581): wrapper (7.7.26015): starting
19:04:04 (922581): wrapper: running run_atlas (--nthreads 4)
[2025-11-21 19:04:04] Arguments: --nthreads 4
[2025-11-21 19:04:04] Threads: 4
[2025-11-21 19:04:04] Checking for CVMFS
[2025-11-21 19:04:04] No cvmfs_config command found, will try listing directly
[2025-11-21 19:04:04] CVMFS is ok
[2025-11-21 19:04:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 19:04:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 19:04:04] Further information can be found at the LHC@home message board.
[2025-11-21 19:04:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 19:04:04] Checking for apptainer binary...
[2025-11-21 19:04:04] which: no apptainer in ((null))
[2025-11-21 19:04:04] apptainer is not installed, using version from CVMFS
[2025-11-21 19:04:04] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 19:04:05] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut01.grid.cesnet.cz
[2025-11-21 19:04:05] apptainer works
[2025-11-21 19:04:05] Set ATHENA_PROC_NUMBER=4
[2025-11-21 19:04:05] Set ATHENA_CORE_NUMBER=4
[2025-11-21 19:04:05] Starting ATLAS job with PandaID=6893858950
[2025-11-21 19:04:05] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 11:45:43]  *** The last 200 lines of the pilot log: ***
[2025-11-22 11:45:43] 2025-11-22 10:41:05,926 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 11:45:43] 2025-11-22 10:41:07,217 | INFO     | time since job start (59811s) is within the limit (172800.0s)
[2025-11-22 11:45:43] 2025-11-22 10:41:07,906 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-22 11:45:43] 2025-11-22 10:41:07,916 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2753.038734374999
[2025-11-22 11:45:43] 2025-11-22 10:41:07,929 | INFO     | using path: /scratch/boinc/var/slot56/slots/0/PanDA_Pilot-6893858950/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 11:45:43] 2025-11-22 10:41:07,930 | INFO     | extracted standard info from prmon json
[2025-11-22 11:45:43] 2025-11-22 10:41:07,930 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 11:45:43] 2025-11-22 10:41:07,930 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 11:45:43] 2025-11-22 10:41:07,947 | INFO     | fitting pss+swap vs Time
[2025-11-22 11:45:43] 2025-11-22 10:41:07,948 | INFO     | sum of square deviations: 291847648785.0
[2025-11-22 11:45:43] 2025-11-22 10:41:07,968 | INFO     | sum of deviations: 938352085574.9995
[2025-11-22 11:45:43] 2025-11-22 10:41:07,968 | INFO     | mean x: 1763778144.5
[2025-11-22 11:45:43] 2025-11-22 10:41:07,968 | INFO     | mean y: 2308969.369387755
[2025-11-22 11:45:43] 2025-11-22 10:41:07,968 | INFO     | intersect: -5668611825.344383
[2025-11-22 11:45:43] 2025-11-22 10:41:07,970 | INFO     | chi2: 3.7280910866945893
[2025-11-22 11:45:43] 2025-11-22 10:41:07,971 | INFO     | sum of square deviations: 287403342200.0
[2025-11-22 11:45:43] 2025-11-22 10:41:07,990 | INFO     | sum of deviations: 1130791687833.0
[2025-11-22 11:45:43] 2025-11-22 10:41:07,990 | INFO     | mean x: 1763777992.0
[2025-11-22 11:45:43] 2025-11-22 10:41:07,990 | INFO     | mean y: 2315569.6892307694
[2025-11-22 11:45:43] 2025-11-22 10:41:07,990 | INFO     | intersect: -6937288810.932268
[2025-11-22 11:45:43] 2025-11-22 10:41:07,991 | INFO     | chi2: 1.9153411067575592
[2025-11-22 11:45:43] 2025-11-22 10:41:07,991 | INFO     | current chi2=1.9153411067575592 (change=48.624079663897255 %)
[2025-11-22 11:45:43] 2025-11-22 10:41:07,993 | INFO     | sum of square deviations: 283004385302.5
[2025-11-22 11:45:43] 2025-11-22 10:41:08,012 | INFO     | sum of deviations: 1133289371262.9998
[2025-11-22 11:45:43] 2025-11-22 10:41:08,012 | INFO     | mean x: 1763777839.5
[2025-11-22 11:45:43] 2025-11-22 10:41:08,012 | INFO     | mean y: 2315654.148453608
[2025-11-22 11:45:43] 2025-11-22 10:41:08,012 | INFO     | intersect: -7060722173.473893
[2025-11-22 11:45:43] 2025-11-22 10:41:08,013 | INFO     | chi2: 1.8801526710693444
[2025-11-22 11:45:43] 2025-11-22 10:41:08,014 | INFO     | current chi2=1.8801526710693444 (change=1.8371889771522005 %)
[2025-11-22 11:45:43] 2025-11-22 10:41:08,014 | INFO     | right removable region: 969
[2025-11-22 11:45:43] 2025-11-22 10:41:08,015 | INFO     | sum of square deviations: 287403342200.0
[2025-11-22 11:45:43] 2025-11-22 10:41:08,034 | INFO     | sum of deviations: 763070215860.9994
[2025-11-22 11:45:43] 2025-11-22 10:41:08,034 | INFO     | mean x: 1763778297.0
[2025-11-22 11:45:43] 2025-11-22 10:41:08,034 | INFO     | mean y: 2314973.533333333
[2025-11-22 11:45:43] 2025-11-22 10:41:08,034 | INFO     | intersect: -4680604423.02035
[2025-11-22 11:45:43] 2025-11-22 10:41:08,036 | INFO     | chi2: 2.021589835916933
[2025-11-22 11:45:43] 2025-11-22 10:41:08,036 | INFO     | current chi2=2.021589835916933 (change=45.77412973808747 %)
[2025-11-22 11:45:43] 2025-11-22 10:41:08,037 | INFO     | sum of square deviations: 283004385302.5
[2025-11-22 11:45:43] 2025-11-22 10:41:08,056 | INFO     | sum of deviations: 745324951264.0
[2025-11-22 11:45:43] 2025-11-22 10:41:08,056 | INFO     | mean x: 1763778449.5
[2025-11-22 11:45:43] 2025-11-22 10:41:08,056 | INFO     | mean y: 2315588.1463917526
[2025-11-22 11:45:43] 2025-11-22 10:41:08,056 | INFO     | intersect: -4642800018.486112
[2025-11-22 11:45:43] 2025-11-22 10:41:08,057 | INFO     | chi2: 2.019055106104434
[2025-11-22 11:45:43] 2025-11-22 10:41:08,058 | INFO     | current chi2=2.019055106104434 (change=0.1253829915181315 %)
[2025-11-22 11:45:43] 2025-11-22 10:41:08,058 | INFO     | left removable region: 20
[2025-11-22 11:45:43] 2025-11-22 10:41:08,059 | INFO     | sum of square deviations: 265018736450.0
[2025-11-22 11:45:43] 2025-11-22 10:41:08,077 | INFO     | sum of deviations: 919106117277.9999
[2025-11-22 11:45:43] 2025-11-22 10:41:08,077 | INFO     | mean x: 1763778419.0
[2025-11-22 11:45:43] 2025-11-22 10:41:08,077 | INFO     | mean y: 2322967.9315068494
[2025-11-22 11:45:43] 2025-11-22 10:41:08,077 | INFO     | intersect: -6114601277.278097
[2025-11-22 11:45:43] 2025-11-22 10:41:08,079 | INFO     | chi2: 0.15628639378604
[2025-11-22 11:45:43] 2025-11-22 10:41:08,079 | INFO     | current memory leak: 3.47 B/s (using 949 data points, chi2=0.16)
[2025-11-22 11:45:43] 2025-11-22 10:41:08,080 | INFO     | could have reported an average CPU frequency of 2719 MHz (37 samples)
[2025-11-22 11:45:43] 2025-11-22 10:41:08,080 | INFO     | ..............................
[2025-11-22 11:45:43] 2025-11-22 10:41:08,080 | INFO     | . Timing measurements:
[2025-11-22 11:45:43] 2025-11-22 10:41:08,080 | INFO     | . get job = 0 s
[2025-11-22 11:45:43] 2025-11-22 10:41:08,080 | INFO     | . initial setup = 1 s
[2025-11-22 11:45:43] 2025-11-22 10:41:08,081 | INFO     | . payload setup = 6 s
[2025-11-22 11:45:43] 2025-11-22 10:41:08,081 | INFO     | . stage-in = 0 s
[2025-11-22 11:45:43] 2025-11-22 10:41:08,081 | INFO     | . payload execution = 59776 s
[2025-11-22 11:45:43] 2025-11-22 10:41:08,081 | INFO     | . stage-out = 2 s
[2025-11-22 11:45:43] 2025-11-22 10:41:08,081 | INFO     | . log creation = 0 s
[2025-11-22 11:45:43] 2025-11-22 10:41:08,081 | INFO     | ..............................
[2025-11-22 11:45:43] 2025-11-22 10:41:08,178 | INFO     | 
[2025-11-22 11:45:43] 2025-11-22 10:41:08,178 | INFO     | job summary report
[2025-11-22 11:45:43] 2025-11-22 10:41:08,178 | INFO     | --------------------------------------------------
[2025-11-22 11:45:43] 2025-11-22 10:41:08,178 | INFO     | PanDA job id: 6893858950
[2025-11-22 11:45:43] 2025-11-22 10:41:08,178 | INFO     | task id: 47523449
[2025-11-22 11:45:43] 2025-11-22 10:41:08,178 | INFO     | errors: (none)
[2025-11-22 11:45:43] 2025-11-22 10:41:08,178 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 11:45:43] 2025-11-22 10:41:08,178 | INFO     | pilot state: finished 
[2025-11-22 11:45:43] 2025-11-22 10:41:08,178 | INFO     | transexitcode: 0
[2025-11-22 11:45:43] 2025-11-22 10:41:08,179 | INFO     | exeerrorcode: 0
[2025-11-22 11:45:43] 2025-11-22 10:41:08,179 | INFO     | exeerrordiag: 
[2025-11-22 11:45:43] 2025-11-22 10:41:08,179 | INFO     | exitcode: 0
[2025-11-22 11:45:43] 2025-11-22 10:41:08,179 | INFO     | exitmsg: OK
[2025-11-22 11:45:43] 2025-11-22 10:41:08,179 | INFO     | cpuconsumptiontime: 237065 s
[2025-11-22 11:45:43] 2025-11-22 10:41:08,179 | INFO     | nevents: 1000
[2025-11-22 11:45:43] 2025-11-22 10:41:08,179 | INFO     | neventsw: 0
[2025-11-22 11:45:43] 2025-11-22 10:41:08,179 | INFO     | pid: 933598
[2025-11-22 11:45:43] 2025-11-22 10:41:08,179 | INFO     | pgrp: 933598
[2025-11-22 11:45:43] 2025-11-22 10:41:08,179 | INFO     | corecount: 4
[2025-11-22 11:45:43] 2025-11-22 10:41:08,179 | INFO     | event service: False
[2025-11-22 11:45:43] 2025-11-22 10:41:08,179 | INFO     | sizes: {0: 2298698, 1: 2298840, 5: 2299102, 11: 2299158, 59786: 2351248, 59787: 2351247, 59789: 2360447, 59791: 2360503, 59795: 2360749}
[2025-11-22 11:45:43] 2025-11-22 10:41:08,179 | INFO     | --------------------------------------------------
[2025-11-22 11:45:43] 2025-11-22 10:41:08,180 | INFO     | 
[2025-11-22 11:45:43] 2025-11-22 10:41:08,180 | INFO     | executing command: ls -lF /scratch/boinc/var/slot56/slots/0
[2025-11-22 11:45:43] 2025-11-22 10:41:08,200 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 11:45:43] 2025-11-22 10:41:08,200 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 11:45:43] 2025-11-22 10:41:08,200 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 11:45:43] 2025-11-22 10:41:08,201 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 11:45:43] 2025-11-22 10:41:08,201 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 11:45:43] 2025-11-22 10:41:08,201 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 11:45:43] 2025-11-22 10:41:08,201 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 11:45:43] 2025-11-22 10:41:08,201 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 11:45:43] 2025-11-22 10:41:08,201 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 11:45:43] 2025-11-22 10:41:08,201 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 11:45:43] 2025-11-22 10:41:08,201 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 11:45:43] 2025-11-22 10:41:08,201 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 11:45:43] 2025-11-22 10:41:08,201 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 11:45:43] 2025-11-22 10:41:08,201 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 11:45:43] 2025-11-22 10:41:08,201 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 11:45:43] 2025-11-22 10:41:08,202 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 11:45:43] 2025-11-22 10:41:08,202 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 11:45:43] 2025-11-22 10:41:08,202 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 11:45:43] 2025-11-22 10:41:08,202 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 11:45:43] 2025-11-22 10:41:08,202 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 11:45:43] 2025-11-22 10:41:08,202 | INFO     | job 6893858950 has completed (purged errors)
[2025-11-22 11:45:43] 2025-11-22 10:41:08,202 | INFO     | overall cleanup function is called
[2025-11-22 11:45:43] 2025-11-22 10:41:09,214 | INFO     | --- collectZombieJob: --- 10, [933598]
[2025-11-22 11:45:43] 2025-11-22 10:41:09,215 | INFO     | zombie collector waiting for pid 933598
[2025-11-22 11:45:43] 2025-11-22 10:41:09,215 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 11:45:43] 2025-11-22 10:41:09,215 | INFO     | collected zombie processes
[2025-11-22 11:45:43] 2025-11-22 10:41:09,215 | INFO     | will attempt to kill all subprocesses of pid=933598
[2025-11-22 11:45:43] 2025-11-22 10:41:09,611 | INFO     | process IDs to be killed: [933598] (in reverse order)
[2025-11-22 11:45:43] 2025-11-22 10:41:09,725 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 11:45:43] 2025-11-22 10:41:09,726 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 11:45:43] 2025-11-22 10:41:09,739 | INFO     | did not find any defunct processes belonging to 933598
[2025-11-22 11:45:43] 2025-11-22 10:41:09,753 | INFO     | did not find any defunct processes belonging to 933598
[2025-11-22 11:45:43] 2025-11-22 10:41:09,754 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 11:45:43] 2025-11-22 10:41:09,754 | INFO     | ready for new job
[2025-11-22 11:45:43] 2025-11-22 10:41:09,754 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 11:45:43] 2025-11-22 10:41:09,759 | INFO     | ***************************************
[2025-11-22 11:45:43] 2025-11-22 10:41:09,759 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 11:45:43] 2025-11-22 10:41:09,759 | INFO     | ***************************************
[2025-11-22 11:45:43] 2025-11-22 10:41:09,760 | INFO     | 
[2025-11-22 11:45:43] 2025-11-22 10:41:09,763 | INFO     | architecture information:
[2025-11-22 11:45:43] 2025-11-22 10:41:09,764 | INFO     | executing command: cat /etc/os-release
[2025-11-22 11:45:43] 2025-11-22 10:41:09,781 | INFO     | cat /etc/os-release:
[2025-11-22 11:45:43] NAME="CentOS Linux"
[2025-11-22 11:45:43] VERSION="7 (Core)"
[2025-11-22 11:45:43] ID="centos"
[2025-11-22 11:45:43] ID_LIKE="rhel fedora"
[2025-11-22 11:45:43] VERSION_ID="7"
[2025-11-22 11:45:43] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 11:45:43] ANSI_COLOR="0;31"
[2025-11-22 11:45:43] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 11:45:43] HOME_URL="https://www.centos.org/"
[2025-11-22 11:45:43] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 11:45:43] 
[2025-11-22 11:45:43] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 11:45:43] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 11:45:43] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 11:45:43] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 11:45:43] 
[2025-11-22 11:45:43] 2025-11-22 10:41:09,781 | INFO     | ***************************************
[2025-11-22 11:45:43] 2025-11-22 10:41:10,284 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/0
[2025-11-22 11:45:43] 2025-11-22 10:41:10,302 | INFO     | sufficient remaining disk space (659837419520 B)
[2025-11-22 11:45:43] 2025-11-22 10:41:10,303 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 11:45:43] 2025-11-22 10:41:10,303 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 11:45:43] 2025-11-22 10:41:10,303 | INFO     | update_server=False
[2025-11-22 11:45:43] 2025-11-22 10:41:10,303 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 11:45:43] 2025-11-22 10:41:10,304 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 11:45:43] 2025-11-22 10:41:10,304 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 11:45:43] 2025-11-22 10:41:10,304 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 11:45:43] 2025-11-22 10:41:10,305 | INFO     | aborting loop
[2025-11-22 11:45:43] 2025-11-22 10:41:10,427 | INFO     | all data control threads have been joined
[2025-11-22 11:45:43] 2025-11-22 10:41:11,047 | INFO     | all job control threads have been joined
[2025-11-22 11:45:43] 2025-11-22 10:41:11,275 | INFO     | all payload control threads have been joined
[2025-11-22 11:45:43] 2025-11-22 10:41:11,305 | INFO     | [job] retrieve thread has finished
[2025-11-22 11:45:43] 2025-11-22 10:41:11,310 | INFO     | [job] job monitor thread has finished
[2025-11-22 11:45:43] 2025-11-22 10:41:11,409 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 11:45:43] 2025-11-22 10:41:11,433 | INFO     | [data] control thread has finished
[2025-11-22 11:45:43] 2025-11-22 10:41:11,664 | INFO     | [payload] validate_post thread has finished
[2025-11-22 11:45:43] 2025-11-22 10:41:11,743 | INFO     | [data] copytool_in thread has finished
[2025-11-22 11:45:43] 2025-11-22 10:41:12,051 | INFO     | [job] control thread has finished
[2025-11-22 11:45:43] 2025-11-22 10:41:12,172 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 11:45:43] 2025-11-22 10:41:12,268 | INFO     | [payload] failed_post thread has finished
[2025-11-22 11:45:43] 2025-11-22 10:41:12,280 | INFO     | [payload] control thread has finished
[2025-11-22 11:45:43] 2025-11-22 10:41:12,310 | INFO     | [data] copytool_out thread has finished
[2025-11-22 11:45:43] 2025-11-22 10:41:12,365 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 11:45:43] 2025-11-22 10:41:12,445 | INFO     | [job] validate thread has finished
[2025-11-22 11:45:43] 2025-11-22 10:41:13,188 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 11:45:43] 2025-11-22 10:41:14,193 | INFO     | [job] queue monitor thread has finished
[2025-11-22 11:45:43] 2025-11-22 10:41:14,309 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 11:45:43] 2025-11-22 10:41:21,313 | INFO     | job.realtimelogging is not enabled
[2025-11-22 11:45:43] 2025-11-22 10:41:22,315 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 11:45:43] 2025-11-22 10:41:40,796 | INFO     | PID=926404 has CPU usage=8.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-22 11:45:43] 2025-11-22 10:41:40,796 | INFO     | .. there are 4 such processes running
[2025-11-22 11:45:43] 2025-11-22 10:41:40,797 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 11:45:43] 2025-11-22 10:41:40,797 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 11:45:43] 2025-11-22 10:41:40,797 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 11:45:43] 2025-11-22 10:41:53,685 | INFO     | [monitor] cgroup control has ended
[2025-11-22 11:45:43] 2025-11-22 10:41:54,282 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23385857378112)>', '<ExcThread(monitor, started 23385551648512)>']
[2025-11-22 11:45:43] 2025-11-22 10:41:54,867 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 11:45:43] 2025-11-22 10:41:54,867 | INFO     | [monitor] control thread has ended
[2025-11-22 11:45:43] 2025-11-22 10:41:59,299 | INFO     | all workflow threads have been joined
[2025-11-22 11:45:43] 2025-11-22 10:41:59,299 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 11:45:43] 2025-11-22 10:41:59,300 | INFO     | traces error code: 0
[2025-11-22 11:45:43] 2025-11-22 10:41:59,300 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 11:45:43] 2025-11-22 10:41:59,457 [wrapper] ==== pilot stdout END ====
[2025-11-22 11:45:43] 2025-11-22 10:41:59,460 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 11:45:43] 2025-11-22 10:41:59,463 [wrapper] pilotpid: 926404
[2025-11-22 11:45:43] 2025-11-22 10:41:59,465 [wrapper] Pilot exit status: 0
[2025-11-22 11:45:43] 2025-11-22 10:41:59,476 [wrapper] pandaids: 6893858950
[2025-11-22 11:45:43] 2025-11-22 10:41:59,554 [wrapper] cleanup supervisor_pilot 1712542 926405
[2025-11-22 11:45:43] 2025-11-22 10:41:59,558 [wrapper] Test setup, not cleaning
[2025-11-22 11:45:43] 2025-11-22 10:41:59,560 [wrapper] apfmon messages muted
[2025-11-22 11:45:43] 2025-11-22 10:41:59,563 [wrapper] ==== wrapper stdout END ====
[2025-11-22 11:45:43] 2025-11-22 10:41:59,565 [wrapper] ==== wrapper stderr END ====
[2025-11-22 11:45:43]  *** Error codes and diagnostics ***
[2025-11-22 11:45:43]     "exeErrorCode": 0,
[2025-11-22 11:45:43]     "exeErrorDiag": "",
[2025-11-22 11:45:43]     "pilotErrorCode": 0,
[2025-11-22 11:45:43]     "pilotErrorDiag": "",
[2025-11-22 11:45:43]  *** Listing of results directory ***
[2025-11-22 11:45:43] total 1324736
[2025-11-22 11:45:43] -rw-r--r-- 1 boinc boinc    576529 Nov 20 14:12 pilot3.tar.gz
[2025-11-22 11:45:43] -rw-r--r-- 1 boinc boinc      5112 Nov 20 14:20 queuedata.json
[2025-11-22 11:45:43] -rwx------ 1 boinc boinc     36292 Nov 20 14:21 runpilot2-wrapper.sh
[2025-11-22 11:45:43] -rw-r--r-- 1 boinc boinc       100 Nov 21 19:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 11:45:43] -rwxr-xr-x 1 boinc boinc      7986 Nov 21 19:04 run_atlas
[2025-11-22 11:45:43] -rw-r--r-- 1 boinc boinc       105 Nov 21 19:04 job.xml
[2025-11-22 11:45:43] -rw-r--r-- 1 boinc boinc      6633 Nov 21 19:04 init_data.xml
[2025-11-22 11:45:43] -rw-r--r-- 2 boinc boinc 410078541 Nov 21 19:04 EVNT.47493127._000521.pool.root.1
[2025-11-22 11:45:43] -rw-r--r-- 2 boinc boinc     15847 Nov 21 19:04 start_atlas.sh
[2025-11-22 11:45:43] drwxrwx--x 2 boinc boinc      4096 Nov 21 19:04 shared
[2025-11-22 11:45:43] -rw-r--r-- 2 boinc boinc    590098 Nov 21 19:04 input.tar.gz
[2025-11-22 11:45:43] -rw-r--r-- 1 boinc boinc         0 Nov 21 19:04 boinc_lockfile
[2025-11-22 11:45:43] -rw-r--r-- 1 boinc boinc      2783 Nov 21 19:04 pandaJob.out
[2025-11-22 11:45:43] -rw------- 1 boinc boinc    989817 Nov 21 19:04 agis_schedconf.cvmfs.json
[2025-11-22 11:45:43] drwx------ 5 boinc boinc      4096 Nov 21 19:04 pilot3
[2025-11-22 11:45:43] -rw-r--r-- 1 boinc boinc       531 Nov 22 11:33 boinc_task_state.xml
[2025-11-22 11:45:43] -rw------- 1 boinc boinc 922335938 Nov 22 11:40 HITS.47523449._005201.pool.root.1
[2025-11-22 11:45:43] -rw------- 1 boinc boinc      1045 Nov 22 11:40 memory_monitor_summary.json
[2025-11-22 11:45:43] -rw------- 1 boinc boinc   1526164 Nov 22 11:41 agis_ddmendpoints.agis.ALL.json
[2025-11-22 11:45:43] -rw------- 1 boinc boinc   1721749 Nov 22 11:41 log.47523449._005201.job.log.tgz.1
[2025-11-22 11:45:43] -rw------- 1 boinc boinc      8629 Nov 22 11:41 heartbeat.json
[2025-11-22 11:45:43] -rw------- 1 boinc boinc        95 Nov 22 11:41 pilot_heartbeat.json
[2025-11-22 11:45:43] -rw------- 1 boinc boinc      4904 Nov 22 11:41 pilotlog.txt
[2025-11-22 11:45:43] -rw------- 1 boinc boinc   8375619 Nov 22 11:41 log.47523449._005201.job.log.1
[2025-11-22 11:45:43] -rw------- 1 boinc boinc       353 Nov 22 11:41 output.list
[2025-11-22 11:45:43] -rw-r--r-- 1 boinc boinc       620 Nov 22 11:41 runtime_log
[2025-11-22 11:45:43] -rw------- 1 boinc boinc  10117120 Nov 22 11:41 result.tar.gz
[2025-11-22 11:45:43] -rw------- 1 boinc boinc       670 Nov 22 11:41 uD0LDmPmJg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmqhGKDmDJFTrn.diag
[2025-11-22 11:45:43] -rw-r--r-- 1 boinc boinc      9206 Nov 22 11:41 runtime_log.err
[2025-11-22 11:45:43] -rw-r--r-- 1 boinc boinc        28 Nov 22 11:45 wrapper_checkpoint.txt
[2025-11-22 11:45:43] -rw-r--r-- 1 boinc boinc      8192 Nov 22 11:45 boinc_mmap_file
[2025-11-22 11:45:43] -rw-r--r-- 1 boinc boinc     21036 Nov 22 11:45 stderr.txt
[2025-11-22 11:45:43] HITS file was successfully produced:
[2025-11-22 11:45:43] -rw------- 1 boinc boinc 922335938 Nov 22 11:40 shared/HITS.pool.root.1
[2025-11-22 11:45:43]  *** Contents of shared directory: ***
[2025-11-22 11:45:43] total 1311672
[2025-11-22 11:45:43] -rw-r--r-- 2 boinc boinc 410078541 Nov 21 19:04 ATLAS.root_0
[2025-11-22 11:45:43] -rw-r--r-- 2 boinc boinc     15847 Nov 21 19:04 start_atlas.sh
[2025-11-22 11:45:43] -rw-r--r-- 2 boinc boinc    590098 Nov 21 19:04 input.tar.gz
[2025-11-22 11:45:43] -rw------- 1 boinc boinc 922335938 Nov 22 11:40 HITS.pool.root.1
[2025-11-22 11:45:43] -rw------- 1 boinc boinc  10117120 Nov 22 11:41 result.tar.gz
11:45:45 (922581): run_atlas exited; CPU time 239339.653685
11:45:45 (922581): called boinc_finish(0)

</stderr_txt>
]]>

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