Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
10:14:30 (1231771): wrapper (7.7.26015): starting
10:14:30 (1231771): wrapper: running run_atlas (--nthreads 4)
[2025-11-25 10:14:30] Arguments: --nthreads 4
[2025-11-25 10:14:30] Threads: 4
[2025-11-25 10:14:30] Checking for CVMFS
[2025-11-25 10:14:30] No cvmfs_config command found, will try listing directly
[2025-11-25 10:14:30] CVMFS is ok
[2025-11-25 10:14:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 10:14:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 10:14:30] Further information can be found at the LHC@home message board.
[2025-11-25 10:14:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 10:14:30] Checking for apptainer binary...
[2025-11-25 10:14:30] which: no apptainer in ((null))
[2025-11-25 10:14:30] apptainer is not installed, using version from CVMFS
[2025-11-25 10:14:30] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 10:14:31] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut01.grid.cesnet.cz
[2025-11-25 10:14:31] apptainer works
[2025-11-25 10:14:31] Set ATHENA_PROC_NUMBER=4
[2025-11-25 10:14:31] Set ATHENA_CORE_NUMBER=4
[2025-11-25 10:14:31] Starting ATLAS job with PandaID=6893857670
[2025-11-25 10:14:31] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
17:47:23 (1673531): wrapper (7.7.26015): starting
17:47:23 (1673531): wrapper: running run_atlas (--nthreads 4)
[2025-11-25 17:47:23] Arguments: --nthreads 4
[2025-11-25 17:47:23] Threads: 4
[2025-11-25 17:47:23] This job has been restarted, cleaning up previous attempt
[2025-11-25 17:47:23] Checking for CVMFS
[2025-11-25 17:47:23] No cvmfs_config command found, will try listing directly
[2025-11-25 17:47:23] CVMFS is ok
[2025-11-25 17:47:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 17:47:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 17:47:23] Further information can be found at the LHC@home message board.
[2025-11-25 17:47:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 17:47:23] Checking for apptainer binary...
[2025-11-25 17:47:23] which: no apptainer in ((null))
[2025-11-25 17:47:23] apptainer is not installed, using version from CVMFS
[2025-11-25 17:47:23] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 17:47:23] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut01.grid.cesnet.cz
[2025-11-25 17:47:23] apptainer works
[2025-11-25 17:47:23] Set ATHENA_PROC_NUMBER=4
[2025-11-25 17:47:23] Set ATHENA_CORE_NUMBER=4
[2025-11-25 17:47:23] Starting ATLAS job with PandaID=6893857670
[2025-11-25 17:47:23] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
18:39:30 (1738904): wrapper (7.7.26015): starting
18:39:30 (1738904): wrapper: running run_atlas (--nthreads 4)
[2025-11-25 18:39:30] Arguments: --nthreads 4
[2025-11-25 18:39:30] Threads: 4
[2025-11-25 18:39:30] This job has been restarted, cleaning up previous attempt
[2025-11-25 18:39:30] Checking for CVMFS
[2025-11-25 18:39:30] No cvmfs_config command found, will try listing directly
[2025-11-25 18:39:30] CVMFS is ok
[2025-11-25 18:39:30] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-25 18:39:30] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-25 18:39:30] Further information can be found at the LHC@home message board.
[2025-11-25 18:39:30] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-25 18:39:30] Checking for apptainer binary...
[2025-11-25 18:39:30] which: no apptainer in ((null))
[2025-11-25 18:39:30] apptainer is not installed, using version from CVMFS
[2025-11-25 18:39:30] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-25 18:39:30] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot56/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut01.grid.cesnet.cz
[2025-11-25 18:39:30] apptainer works
[2025-11-25 18:39:31] Set ATHENA_PROC_NUMBER=4
[2025-11-25 18:39:31] Set ATHENA_CORE_NUMBER=4
[2025-11-25 18:39:31] Starting ATLAS job with PandaID=6893857670
[2025-11-25 18:39:31] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot56/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-26 11:42:50]  *** The last 200 lines of the pilot log: ***
[2025-11-26 11:42:50] 2025-11-26 10:41:26,701 | INFO     | time since job start (61305s) is within the limit (172800.0s)
[2025-11-26 11:42:50] 2025-11-26 10:41:27,374 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-26 11:42:50] 2025-11-26 10:41:27,384 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 2550.4540624999995
[2025-11-26 11:42:50] 2025-11-26 10:41:27,397 | INFO     | using path: /scratch/boinc/var/slot56/slots/0/PanDA_Pilot-6893857670/memory_monitor_summary.json (trf name=prmon)
[2025-11-26 11:42:50] 2025-11-26 10:41:27,398 | INFO     | extracted standard info from prmon json
[2025-11-26 11:42:50] 2025-11-26 10:41:27,398 | INFO     | extracted standard memory fields from prmon json
[2025-11-26 11:42:50] 2025-11-26 10:41:27,398 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-26 11:42:50] 2025-11-26 10:41:27,416 | INFO     | fitting pss+swap vs Time
[2025-11-26 11:42:50] 2025-11-26 10:41:27,418 | INFO     | sum of square deviations: 314757515348.99915
[2025-11-26 11:42:50] 2025-11-26 10:41:27,438 | INFO     | sum of deviations: 1020717255993.5856
[2025-11-26 11:42:50] 2025-11-26 10:41:27,439 | INFO     | mean x: 1764123031.000995
[2025-11-26 11:42:50] 2025-11-26 10:41:27,439 | INFO     | mean y: 2286614.414925373
[2025-11-26 11:42:50] 2025-11-26 10:41:27,440 | INFO     | intersect: -5718532529.305476
[2025-11-26 11:42:50] 2025-11-26 10:41:27,442 | INFO     | chi2: 4.115021472678062
[2025-11-26 11:42:50] 2025-11-26 10:41:27,443 | INFO     | sum of square deviations: 310082972193.999
[2025-11-26 11:42:50] 2025-11-26 10:41:27,464 | INFO     | sum of deviations: 1230130857002.3447
[2025-11-26 11:42:50] 2025-11-26 10:41:27,464 | INFO     | mean x: 1764122878.501
[2025-11-26 11:42:50] 2025-11-26 10:41:27,464 | INFO     | mean y: 2293440.155
[2025-11-26 11:42:50] 2025-11-26 10:41:27,465 | INFO     | intersect: -6996162402.270894
[2025-11-26 11:42:50] 2025-11-26 10:41:27,466 | INFO     | chi2: 1.989535560199598
[2025-11-26 11:42:50] 2025-11-26 10:41:27,466 | INFO     | current chi2=1.989535560199598 (change=51.65187901425931 %)
[2025-11-26 11:42:50] 2025-11-26 10:41:27,467 | INFO     | sum of square deviations: 305454941538.9991
[2025-11-26 11:42:50] 2025-11-26 10:41:27,488 | INFO     | sum of deviations: 1230212022229.1787
[2025-11-26 11:42:50] 2025-11-26 10:41:27,488 | INFO     | mean x: 1764122726.001005
[2025-11-26 11:42:50] 2025-11-26 10:41:27,488 | INFO     | mean y: 2293440.823115578
[2025-11-26 11:42:50] 2025-11-26 10:41:27,488 | INFO     | intersect: -7102666051.0077305
[2025-11-26 11:42:50] 2025-11-26 10:41:27,489 | INFO     | chi2: 1.9561124366480354
[2025-11-26 11:42:50] 2025-11-26 10:41:27,490 | INFO     | current chi2=1.9561124366480354 (change=1.679946024599309 %)
[2025-11-26 11:42:50] 2025-11-26 10:41:27,490 | INFO     | right removable region: 994
[2025-11-26 11:42:50] 2025-11-26 10:41:27,491 | INFO     | sum of square deviations: 310082971583.999
[2025-11-26 11:42:50] 2025-11-26 10:41:27,512 | INFO     | sum of deviations: 833695947603.488
[2025-11-26 11:42:50] 2025-11-26 10:41:27,512 | INFO     | mean x: 1764123183.501
[2025-11-26 11:42:50] 2025-11-26 10:41:27,512 | INFO     | mean y: 2292706.013
[2025-11-26 11:42:50] 2025-11-26 10:41:27,512 | INFO     | intersect: -4740767971.086245
[2025-11-26 11:42:50] 2025-11-26 10:41:27,513 | INFO     | chi2: 2.29490133754199
[2025-11-26 11:42:50] 2025-11-26 10:41:27,513 | INFO     | current chi2=2.29490133754199 (change=44.23112120364064 %)
[2025-11-26 11:42:50] 2025-11-26 10:41:27,515 | INFO     | sum of square deviations: 305454940318.9991
[2025-11-26 11:42:50] 2025-11-26 10:41:27,535 | INFO     | sum of deviations: 799786571970.6434
[2025-11-26 11:42:50] 2025-11-26 10:41:27,536 | INFO     | mean x: 1764123336.001005
[2025-11-26 11:42:50] 2025-11-26 10:41:27,536 | INFO     | mean y: 2293823.3567839195
[2025-11-26 11:42:50] 2025-11-26 10:41:27,536 | INFO     | intersect: -4616790595.314512
[2025-11-26 11:42:50] 2025-11-26 10:41:27,537 | INFO     | chi2: 2.276487516557225
[2025-11-26 11:42:50] 2025-11-26 10:41:27,537 | INFO     | current chi2=2.276487516557225 (change=0.802379635391553 %)
[2025-11-26 11:42:50] 2025-11-26 10:41:27,537 | INFO     | left removable region: 20
[2025-11-26 11:42:50] 2025-11-26 10:41:27,539 | INFO     | sum of square deviations: 286519878377.4989
[2025-11-26 11:42:50] 2025-11-26 10:41:27,558 | INFO     | sum of deviations: 951610203085.8539
[2025-11-26 11:42:50] 2025-11-26 10:41:27,558 | INFO     | mean x: 1764123305.5010266
[2025-11-26 11:42:50] 2025-11-26 10:41:27,558 | INFO     | mean y: 2302546.6457905546
[2025-11-26 11:42:50] 2025-11-26 10:41:27,558 | INFO     | intersect: -5856829275.281426
[2025-11-26 11:42:50] 2025-11-26 10:41:27,559 | INFO     | chi2: 0.09395590986235926
[2025-11-26 11:42:50] 2025-11-26 10:41:27,560 | INFO     | current memory leak: 3.32 B/s (using 974 data points, chi2=0.09)
[2025-11-26 11:42:50] 2025-11-26 10:41:27,561 | INFO     | could have reported an average CPU frequency of 2682 MHz (37 samples)
[2025-11-26 11:42:50] 2025-11-26 10:41:27,561 | INFO     | ..............................
[2025-11-26 11:42:50] 2025-11-26 10:41:27,561 | INFO     | . Timing measurements:
[2025-11-26 11:42:50] 2025-11-26 10:41:27,561 | INFO     | . get job = 0 s
[2025-11-26 11:42:50] 2025-11-26 10:41:27,561 | INFO     | . initial setup = 1 s
[2025-11-26 11:42:50] 2025-11-26 10:41:27,561 | INFO     | . payload setup = 6 s
[2025-11-26 11:42:50] 2025-11-26 10:41:27,561 | INFO     | . stage-in = 0 s
[2025-11-26 11:42:50] 2025-11-26 10:41:27,562 | INFO     | . payload execution = 61272 s
[2025-11-26 11:42:50] 2025-11-26 10:41:27,562 | INFO     | . stage-out = 2 s
[2025-11-26 11:42:50] 2025-11-26 10:41:27,562 | INFO     | . log creation = 0 s
[2025-11-26 11:42:50] 2025-11-26 10:41:27,562 | INFO     | ..............................
[2025-11-26 11:42:50] 2025-11-26 10:41:28,046 | INFO     | 
[2025-11-26 11:42:50] 2025-11-26 10:41:28,046 | INFO     | job summary report
[2025-11-26 11:42:50] 2025-11-26 10:41:28,046 | INFO     | --------------------------------------------------
[2025-11-26 11:42:50] 2025-11-26 10:41:28,046 | INFO     | PanDA job id: 6893857670
[2025-11-26 11:42:50] 2025-11-26 10:41:28,046 | INFO     | task id: 47523449
[2025-11-26 11:42:50] 2025-11-26 10:41:28,046 | INFO     | errors: (none)
[2025-11-26 11:42:50] 2025-11-26 10:41:28,047 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-26 11:42:50] 2025-11-26 10:41:28,047 | INFO     | pilot state: finished 
[2025-11-26 11:42:50] 2025-11-26 10:41:28,047 | INFO     | transexitcode: 0
[2025-11-26 11:42:50] 2025-11-26 10:41:28,047 | INFO     | exeerrorcode: 0
[2025-11-26 11:42:50] 2025-11-26 10:41:28,047 | INFO     | exeerrordiag: 
[2025-11-26 11:42:50] 2025-11-26 10:41:28,047 | INFO     | exitcode: 0
[2025-11-26 11:42:50] 2025-11-26 10:41:28,047 | INFO     | exitmsg: OK
[2025-11-26 11:42:50] 2025-11-26 10:41:28,047 | INFO     | cpuconsumptiontime: 243089 s
[2025-11-26 11:42:50] 2025-11-26 10:41:28,047 | INFO     | nevents: 1000
[2025-11-26 11:42:50] 2025-11-26 10:41:28,047 | INFO     | neventsw: 0
[2025-11-26 11:42:50] 2025-11-26 10:41:28,047 | INFO     | pid: 1750201
[2025-11-26 11:42:50] 2025-11-26 10:41:28,047 | INFO     | pgrp: 1750201
[2025-11-26 11:42:50] 2025-11-26 10:41:28,048 | INFO     | corecount: 4
[2025-11-26 11:42:50] 2025-11-26 10:41:28,048 | INFO     | event service: False
[2025-11-26 11:42:50] 2025-11-26 10:41:28,048 | INFO     | sizes: {0: 2284319, 5: 2284581, 11: 2284637, 61280: 2337203, 61284: 2346275, 61290: 2346465}
[2025-11-26 11:42:50] 2025-11-26 10:41:28,048 | INFO     | --------------------------------------------------
[2025-11-26 11:42:50] 2025-11-26 10:41:28,048 | INFO     | 
[2025-11-26 11:42:50] 2025-11-26 10:41:28,048 | INFO     | executing command: ls -lF /scratch/boinc/var/slot56/slots/0
[2025-11-26 11:42:50] 2025-11-26 10:41:28,071 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-26 11:42:50] 2025-11-26 10:41:28,072 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-26 11:42:50] 2025-11-26 10:41:28,072 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-26 11:42:50] 2025-11-26 10:41:28,072 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-26 11:42:50] 2025-11-26 10:41:28,072 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-26 11:42:50] 2025-11-26 10:41:28,072 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-26 11:42:50] 2025-11-26 10:41:28,072 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-26 11:42:50] 2025-11-26 10:41:28,072 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-26 11:42:50] 2025-11-26 10:41:28,072 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-26 11:42:50] 2025-11-26 10:41:28,072 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-26 11:42:50] 2025-11-26 10:41:28,073 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-26 11:42:50] 2025-11-26 10:41:28,073 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-26 11:42:50] 2025-11-26 10:41:28,073 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-26 11:42:50] 2025-11-26 10:41:28,073 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-26 11:42:50] 2025-11-26 10:41:28,073 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-26 11:42:50] 2025-11-26 10:41:28,073 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-26 11:42:50] 2025-11-26 10:41:28,073 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-26 11:42:50] 2025-11-26 10:41:28,073 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-26 11:42:50] 2025-11-26 10:41:28,073 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-26 11:42:50] 2025-11-26 10:41:28,073 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-26 11:42:50] 2025-11-26 10:41:28,074 | INFO     | job 6893857670 has completed (purged errors)
[2025-11-26 11:42:50] 2025-11-26 10:41:28,074 | INFO     | overall cleanup function is called
[2025-11-26 11:42:50] 2025-11-26 10:41:29,089 | INFO     | --- collectZombieJob: --- 10, [1750201]
[2025-11-26 11:42:50] 2025-11-26 10:41:29,089 | INFO     | zombie collector waiting for pid 1750201
[2025-11-26 11:42:50] 2025-11-26 10:41:29,089 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-26 11:42:50] 2025-11-26 10:41:29,089 | INFO     | collected zombie processes
[2025-11-26 11:42:50] 2025-11-26 10:41:29,089 | INFO     | will attempt to kill all subprocesses of pid=1750201
[2025-11-26 11:42:50] 2025-11-26 10:41:29,496 | INFO     | process IDs to be killed: [1750201] (in reverse order)
[2025-11-26 11:42:50] 2025-11-26 10:41:29,613 | WARNING  | found no corresponding commands to process id(s)
[2025-11-26 11:42:50] 2025-11-26 10:41:29,613 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-26 11:42:50] 2025-11-26 10:41:29,627 | INFO     | did not find any defunct processes belonging to 1750201
[2025-11-26 11:42:50] 2025-11-26 10:41:29,640 | INFO     | did not find any defunct processes belonging to 1750201
[2025-11-26 11:42:50] 2025-11-26 10:41:29,641 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-26 11:42:50] 2025-11-26 10:41:29,642 | INFO     | ready for new job
[2025-11-26 11:42:50] 2025-11-26 10:41:29,642 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-26 11:42:50] 2025-11-26 10:41:29,647 | INFO     | ***************************************
[2025-11-26 11:42:50] 2025-11-26 10:41:29,648 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-26 11:42:50] 2025-11-26 10:41:29,648 | INFO     | ***************************************
[2025-11-26 11:42:50] 2025-11-26 10:41:29,648 | INFO     | 
[2025-11-26 11:42:50] 2025-11-26 10:41:29,652 | INFO     | architecture information:
[2025-11-26 11:42:50] 2025-11-26 10:41:29,653 | INFO     | executing command: cat /etc/os-release
[2025-11-26 11:42:50] 2025-11-26 10:41:29,669 | INFO     | cat /etc/os-release:
[2025-11-26 11:42:50] NAME="CentOS Linux"
[2025-11-26 11:42:50] VERSION="7 (Core)"
[2025-11-26 11:42:50] ID="centos"
[2025-11-26 11:42:50] ID_LIKE="rhel fedora"
[2025-11-26 11:42:50] VERSION_ID="7"
[2025-11-26 11:42:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-26 11:42:50] ANSI_COLOR="0;31"
[2025-11-26 11:42:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-26 11:42:50] HOME_URL="https://www.centos.org/"
[2025-11-26 11:42:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-26 11:42:50] 
[2025-11-26 11:42:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-26 11:42:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-26 11:42:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-26 11:42:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-26 11:42:50] 
[2025-11-26 11:42:50] 2025-11-26 10:41:29,670 | INFO     | ***************************************
[2025-11-26 11:42:50] 2025-11-26 10:41:30,172 | INFO     | executing command: df -mP /scratch/boinc/var/slot56/slots/0
[2025-11-26 11:42:50] 2025-11-26 10:41:30,189 | INFO     | sufficient remaining disk space (676779261952 B)
[2025-11-26 11:42:50] 2025-11-26 10:41:30,190 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-26 11:42:50] 2025-11-26 10:41:30,190 | INFO     | current server update state: UPDATING_FINAL
[2025-11-26 11:42:50] 2025-11-26 10:41:30,190 | INFO     | update_server=False
[2025-11-26 11:42:50] 2025-11-26 10:41:30,190 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-26 11:42:50] 2025-11-26 10:41:30,190 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-26 11:42:50] 2025-11-26 10:41:30,540 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-26 11:42:50] 2025-11-26 10:41:30,540 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-26 11:42:50] 2025-11-26 10:41:30,540 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-26 11:42:50] 2025-11-26 10:41:30,540 | INFO     | will abort loop
[2025-11-26 11:42:50] 2025-11-26 10:41:30,922 | INFO     | all data control threads have been joined
[2025-11-26 11:42:50] 2025-11-26 10:41:31,195 | INFO     | [job] retrieve thread has finished
[2025-11-26 11:42:50] 2025-11-26 10:41:31,297 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-26 11:42:50] 2025-11-26 10:41:31,421 | INFO     | [payload] validate_post thread has finished
[2025-11-26 11:42:50] 2025-11-26 10:41:31,462 | INFO     | all job control threads have been joined
[2025-11-26 11:42:50] 2025-11-26 10:41:31,545 | INFO     | [job] job monitor thread has finished
[2025-11-26 11:42:50] 2025-11-26 10:41:31,669 | INFO     | all payload control threads have been joined
[2025-11-26 11:42:50] 2025-11-26 10:41:31,927 | INFO     | [data] control thread has finished
[2025-11-26 11:42:50] 2025-11-26 10:41:32,016 | INFO     | [payload] execute_payloads thread has finished
[2025-11-26 11:42:50] 2025-11-26 10:41:32,076 | INFO     | [payload] failed_post thread has finished
[2025-11-26 11:42:50] 2025-11-26 10:41:32,117 | INFO     | [data] copytool_in thread has finished
[2025-11-26 11:42:50] 2025-11-26 10:41:32,168 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-26 11:42:50] 2025-11-26 10:41:32,196 | INFO     | [data] copytool_out thread has finished
[2025-11-26 11:42:50] 2025-11-26 10:41:32,287 | INFO     | [job] create_data_payload thread has finished
[2025-11-26 11:42:50] 2025-11-26 10:41:32,461 | INFO     | [job] validate thread has finished
[2025-11-26 11:42:50] 2025-11-26 10:41:32,467 | INFO     | [job] control thread has finished
[2025-11-26 11:42:50] 2025-11-26 10:41:32,473 | INFO     | [payload] validate_pre thread has finished
[2025-11-26 11:42:50] 2025-11-26 10:41:32,671 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-26 11:42:50] 2025-11-26 10:41:32,674 | INFO     | [payload] control thread has finished
[2025-11-26 11:42:50] 2025-11-26 10:41:33,676 | INFO     | [job] queue monitor thread has finished
[2025-11-26 11:42:50] 2025-11-26 10:41:36,173 | INFO     | [data] queue_monitor thread has finished
[2025-11-26 11:42:50] 2025-11-26 10:42:00,289 | INFO     | PID=1742664 has CPU usage=10.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-26 11:42:50] 2025-11-26 10:42:00,289 | INFO     | .. there are 4 such processes running
[2025-11-26 11:42:50] 2025-11-26 10:42:00,290 | INFO     | found 0 job(s) in 20 queues
[2025-11-26 11:42:50] 2025-11-26 10:42:00,290 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-26 11:42:50] 2025-11-26 10:42:00,290 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-26 11:42:50] 2025-11-26 10:42:20,598 | INFO     | [monitor] cgroup control has ended
[2025-11-26 11:42:50] 2025-11-26 10:42:21,639 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23072943146816)>', '<ExcThread(monitor, started 23072708982528)>']
[2025-11-26 11:42:50] 2025-11-26 10:42:22,400 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-26 11:42:50] 2025-11-26 10:42:22,400 | INFO     | [monitor] control thread has ended
[2025-11-26 11:42:50] 2025-11-26 10:42:26,664 | INFO     | all workflow threads have been joined
[2025-11-26 11:42:50] 2025-11-26 10:42:26,664 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-26 11:42:50] 2025-11-26 10:42:26,664 | INFO     | traces error code: 0
[2025-11-26 11:42:50] 2025-11-26 10:42:26,665 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-26 11:42:50] 2025-11-26 10:42:26,807 [wrapper] ==== pilot stdout END ====
[2025-11-26 11:42:50] 2025-11-26 10:42:26,810 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-26 11:42:50] 2025-11-26 10:42:26,812 [wrapper] pilotpid: 1742664
[2025-11-26 11:42:50] 2025-11-26 10:42:26,815 [wrapper] Pilot exit status: 0
[2025-11-26 11:42:50] 2025-11-26 10:42:26,825 [wrapper] pandaids: 6893857670 6893857670 6893857670
[2025-11-26 11:42:50] 2025-11-26 10:42:26,904 [wrapper] cleanup supervisor_pilot 2612127 1742665
[2025-11-26 11:42:50] 2025-11-26 10:42:26,907 [wrapper] Test setup, not cleaning
[2025-11-26 11:42:50] 2025-11-26 10:42:26,909 [wrapper] apfmon messages muted
[2025-11-26 11:42:50] 2025-11-26 10:42:26,912 [wrapper] ==== wrapper stdout END ====
[2025-11-26 11:42:50] 2025-11-26 10:42:26,914 [wrapper] ==== wrapper stderr END ====
[2025-11-26 11:42:50]  *** Error codes and diagnostics ***
[2025-11-26 11:42:50]     "exeErrorCode": 0,
[2025-11-26 11:42:50]     "exeErrorDiag": "",
[2025-11-26 11:42:50]     "pilotErrorCode": 0,
[2025-11-26 11:42:50]     "pilotErrorDiag": "",
[2025-11-26 11:42:50]  *** Listing of results directory ***
[2025-11-26 11:42:50] total 1716676
[2025-11-26 11:42:50] drwx------ 5 boinc boinc      4096 Nov  5 18:16 pilot3
[2025-11-26 11:42:50] -rw-r--r-- 1 boinc boinc    576529 Nov 20 14:01 pilot3.tar.gz
[2025-11-26 11:42:50] -rw-r--r-- 1 boinc boinc      5112 Nov 20 14:08 queuedata.json
[2025-11-26 11:42:50] -rwx------ 1 boinc boinc     36292 Nov 20 14:09 runpilot2-wrapper.sh
[2025-11-26 11:42:50] -rw-r--r-- 1 boinc boinc       100 Nov 25 10:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-26 11:42:50] -rwxr-xr-x 1 boinc boinc      7986 Nov 25 10:14 run_atlas
[2025-11-26 11:42:50] -rw-r--r-- 1 boinc boinc       105 Nov 25 10:14 job.xml
[2025-11-26 11:42:50] -rw-r--r-- 3 boinc boinc 409460005 Nov 25 10:14 EVNT.47493127._000498.pool.root.1
[2025-11-26 11:42:50] -rw-r--r-- 3 boinc boinc 409460005 Nov 25 10:14 ATLAS.root_0
[2025-11-26 11:42:50] -rw-r--r-- 2 boinc boinc     15847 Nov 25 10:14 start_atlas.sh
[2025-11-26 11:42:50] drwxrwx--x 2 boinc boinc      4096 Nov 25 10:14 shared
[2025-11-26 11:42:50] -rw-r--r-- 2 boinc boinc    590105 Nov 25 10:14 input.tar.gz
[2025-11-26 11:42:50] -rw-r--r-- 1 boinc boinc         0 Nov 25 10:14 boinc_lockfile
[2025-11-26 11:42:50] -rw-r--r-- 1 boinc boinc      2782 Nov 25 18:39 pandaJob.out
[2025-11-26 11:42:50] -rw------- 1 boinc boinc    991543 Nov 25 18:39 agis_schedconf.cvmfs.json
[2025-11-26 11:42:50] -rw-r--r-- 1 boinc boinc      6642 Nov 25 21:17 init_data.xml
[2025-11-26 11:42:50] -rw-r--r-- 1 boinc boinc       532 Nov 26 11:34 boinc_task_state.xml
[2025-11-26 11:42:50] -rw------- 1 boinc boinc 914367213 Nov 26 11:40 HITS.47523449._004971.pool.root.1
[2025-11-26 11:42:50] -rw------- 1 boinc boinc      1045 Nov 26 11:41 memory_monitor_summary.json
[2025-11-26 11:42:50] -rw------- 1 boinc boinc   1516240 Nov 26 11:41 agis_ddmendpoints.agis.ALL.json
[2025-11-26 11:42:50] -rw------- 1 boinc boinc   1740970 Nov 26 11:41 log.47523449._004971.job.log.tgz.1
[2025-11-26 11:42:50] -rw------- 1 boinc boinc      8628 Nov 26 11:41 heartbeat.json
[2025-11-26 11:42:50] -rw------- 1 boinc boinc        97 Nov 26 11:42 pilot_heartbeat.json
[2025-11-26 11:42:50] -rw------- 1 boinc boinc      5020 Nov 26 11:42 pilotlog.txt
[2025-11-26 11:42:50] -rw------- 1 boinc boinc   8590827 Nov 26 11:42 log.47523449._004971.job.log.1
[2025-11-26 11:42:50] -rw------- 1 boinc boinc       353 Nov 26 11:42 output.list
[2025-11-26 11:42:50] -rw-r--r-- 1 boinc boinc       620 Nov 26 11:42 runtime_log
[2025-11-26 11:42:50] -rw------- 1 boinc boinc  10352640 Nov 26 11:42 result.tar.gz
[2025-11-26 11:42:50] -rw-r--r-- 1 boinc boinc      9283 Nov 26 11:42 runtime_log.err
[2025-11-26 11:42:50] -rw------- 1 boinc boinc       920 Nov 26 11:42 b6dMDmPaJg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmygGKDmtwBO6m.diag
[2025-11-26 11:42:50] -rw-r--r-- 1 boinc boinc      8192 Nov 26 11:42 boinc_mmap_file
[2025-11-26 11:42:50] -rw-r--r-- 1 boinc boinc        28 Nov 26 11:42 wrapper_checkpoint.txt
[2025-11-26 11:42:50] -rw-r--r-- 1 boinc boinc     24866 Nov 26 11:42 stderr.txt
[2025-11-26 11:42:50] HITS file was successfully produced:
[2025-11-26 11:42:50] -rw------- 1 boinc boinc 914367213 Nov 26 11:40 shared/HITS.pool.root.1
[2025-11-26 11:42:50]  *** Contents of shared directory: ***
[2025-11-26 11:42:50] total 1303516
[2025-11-26 11:42:50] -rw-r--r-- 3 boinc boinc 409460005 Nov 25 10:14 ATLAS.root_0
[2025-11-26 11:42:50] -rw-r--r-- 2 boinc boinc     15847 Nov 25 10:14 start_atlas.sh
[2025-11-26 11:42:50] -rw-r--r-- 2 boinc boinc    590105 Nov 25 10:14 input.tar.gz
[2025-11-26 11:42:50] -rw------- 1 boinc boinc 914367213 Nov 26 11:40 HITS.pool.root.1
[2025-11-26 11:42:50] -rw------- 1 boinc boinc  10352640 Nov 26 11:42 result.tar.gz
11:42:52 (1738904): run_atlas exited; CPU time 245467.633205
11:42:52 (1738904): called boinc_finish(0)

</stderr_txt>
]]>

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