Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
00:00:21 (3533858): wrapper (7.7.26015): starting
00:00:21 (3533858): wrapper: running run_atlas (--nthreads 4)
[2025-11-21 00:00:21] Arguments: --nthreads 4
[2025-11-21 00:00:21] Threads: 4
[2025-11-21 00:00:21] Checking for CVMFS
[2025-11-21 00:00:21] No cvmfs_config command found, will try listing directly
[2025-11-21 00:00:21] CVMFS is ok
[2025-11-21 00:00:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 00:00:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 00:00:21] Further information can be found at the LHC@home message board.
[2025-11-21 00:00:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 00:00:21] Checking for apptainer binary...
[2025-11-21 00:00:21] which: no apptainer in ((null))
[2025-11-21 00:00:21] apptainer is not installed, using version from CVMFS
[2025-11-21 00:00:21] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 00:00:22] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot112/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2025-11-21 00:00:22] apptainer works
[2025-11-21 00:00:22] Set ATHENA_PROC_NUMBER=4
[2025-11-21 00:00:22] Set ATHENA_CORE_NUMBER=4
[2025-11-21 00:00:22] Starting ATLAS job with PandaID=6893857658
[2025-11-21 00:00:22] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot112/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-21 17:48:13]  *** The last 200 lines of the pilot log: ***
[2025-11-21 17:48:13] 2025-11-21 16:46:33,445 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-21 17:48:13] 2025-11-21 16:46:34,107 | INFO     | time since job start (63943s) is within the limit (172800.0s)
[2025-11-21 17:48:13] 2025-11-21 16:46:35,193 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-21 17:48:13] 2025-11-21 16:46:35,214 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2714.791515624999
[2025-11-21 17:48:13] 2025-11-21 16:46:35,241 | INFO     | using path: /scratch/boinc/var/slot112/slots/0/PanDA_Pilot-6893857658/memory_monitor_summary.json (trf name=prmon)
[2025-11-21 17:48:13] 2025-11-21 16:46:35,242 | INFO     | extracted standard info from prmon json
[2025-11-21 17:48:13] 2025-11-21 16:46:35,242 | INFO     | extracted standard memory fields from prmon json
[2025-11-21 17:48:13] 2025-11-21 16:46:35,242 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-21 17:48:13] 2025-11-21 16:46:35,259 | INFO     | fitting pss+swap vs Time
[2025-11-21 17:48:13] 2025-11-21 16:46:35,261 | INFO     | sum of square deviations: 355897864978.8037
[2025-11-21 17:48:13] 2025-11-21 16:46:35,286 | INFO     | sum of deviations: 1113303348840.519
[2025-11-21 17:48:13] 2025-11-21 16:46:35,286 | INFO     | mean x: 1763711624.225406
[2025-11-21 17:48:13] 2025-11-21 16:46:35,286 | INFO     | mean y: 2276773.5444126073
[2025-11-21 17:48:13] 2025-11-21 16:46:35,286 | INFO     | intersect: -5514884892.36229
[2025-11-21 17:48:13] 2025-11-21 16:46:35,288 | INFO     | chi2: 4.594983917622856
[2025-11-21 17:48:13] 2025-11-21 16:46:35,289 | INFO     | sum of square deviations: 350823506931.0484
[2025-11-21 17:48:13] 2025-11-21 16:46:35,314 | INFO     | sum of deviations: 1343351923596.3643
[2025-11-21 17:48:13] 2025-11-21 16:46:35,314 | INFO     | mean x: 1763711471.7264876
[2025-11-21 17:48:13] 2025-11-21 16:46:35,315 | INFO     | mean y: 2283684.443378119
[2025-11-21 17:48:13] 2025-11-21 16:46:35,315 | INFO     | intersect: -6751212450.803956
[2025-11-21 17:48:13] 2025-11-21 16:46:35,316 | INFO     | chi2: 2.249650641687048
[2025-11-21 17:48:13] 2025-11-21 16:46:35,316 | INFO     | current chi2=2.249650641687048 (change=51.04116397319471 %)
[2025-11-21 17:48:13] 2025-11-21 16:46:35,317 | INFO     | sum of square deviations: 345797487417.19794
[2025-11-21 17:48:13] 2025-11-21 16:46:35,345 | INFO     | sum of deviations: 1323485026605.0073
[2025-11-21 17:48:13] 2025-11-21 16:46:35,345 | INFO     | mean x: 1763711319.225651
[2025-11-21 17:48:13] 2025-11-21 16:46:35,345 | INFO     | mean y: 2283081.62391514
[2025-11-21 17:48:13] 2025-11-21 16:46:35,346 | INFO     | intersect: -6748042201.777267
[2025-11-21 17:48:13] 2025-11-21 16:46:35,347 | INFO     | chi2: 2.2495838945312774
[2025-11-21 17:48:13] 2025-11-21 16:46:35,347 | INFO     | current chi2=2.2495838945312774 (change=0.002967000943774586 %)
[2025-11-21 17:48:13] 2025-11-21 16:46:35,347 | INFO     | right removable region: 1036
[2025-11-21 17:48:13] 2025-11-21 16:46:35,348 | INFO     | sum of square deviations: 350823362971.0487
[2025-11-21 17:48:13] 2025-11-21 16:46:35,384 | INFO     | sum of deviations: 907769946774.9465
[2025-11-21 17:48:13] 2025-11-21 16:46:35,385 | INFO     | mean x: 1763711776.7264876
[2025-11-21 17:48:13] 2025-11-21 16:46:35,385 | INFO     | mean y: 2282940.7120921304
[2025-11-21 17:48:13] 2025-11-21 16:46:35,385 | INFO     | intersect: -4561394153.442764
[2025-11-21 17:48:13] 2025-11-21 16:46:35,386 | INFO     | chi2: 2.514659500556709
[2025-11-21 17:48:13] 2025-11-21 16:46:35,386 | INFO     | current chi2=2.514659500556709 (change=45.273812800249594 %)
[2025-11-21 17:48:13] 2025-11-21 16:46:35,387 | INFO     | sum of square deviations: 345797390549.7453
[2025-11-21 17:48:13] 2025-11-21 16:46:35,411 | INFO     | sum of deviations: 879975771805.0894
[2025-11-21 17:48:13] 2025-11-21 16:46:35,411 | INFO     | mean x: 1763711929.2266152
[2025-11-21 17:48:13] 2025-11-21 16:46:35,411 | INFO     | mean y: 2283783.931533269
[2025-11-21 17:48:13] 2025-11-21 16:46:35,411 | INFO     | intersect: -4485962248.508567
[2025-11-21 17:48:13] 2025-11-21 16:46:35,413 | INFO     | chi2: 2.5071357044072755
[2025-11-21 17:48:13] 2025-11-21 16:46:35,413 | INFO     | current chi2=2.5071357044072755 (change=0.29919741212548967 %)
[2025-11-21 17:48:13] 2025-11-21 16:46:35,413 | INFO     | left removable region: 20
[2025-11-21 17:48:13] 2025-11-21 16:46:35,414 | INFO     | sum of square deviations: 325212169385.0235
[2025-11-21 17:48:13] 2025-11-21 16:46:35,440 | INFO     | sum of deviations: 1024308996954.0695
[2025-11-21 17:48:13] 2025-11-21 16:46:35,441 | INFO     | mean x: 1763711898.7283463
[2025-11-21 17:48:13] 2025-11-21 16:46:35,441 | INFO     | mean y: 2292065.18503937
[2025-11-21 17:48:13] 2025-11-21 16:46:35,441 | INFO     | intersect: -5552807454.364446
[2025-11-21 17:48:13] 2025-11-21 16:46:35,442 | INFO     | chi2: 0.12485849947964356
[2025-11-21 17:48:13] 2025-11-21 16:46:35,442 | INFO     | current memory leak: 3.15 B/s (using 1016 data points, chi2=0.12)
[2025-11-21 17:48:13] 2025-11-21 16:46:35,443 | INFO     | could have reported an average CPU frequency of 2691 MHz (38 samples)
[2025-11-21 17:48:13] 2025-11-21 16:46:35,443 | INFO     | ..............................
[2025-11-21 17:48:13] 2025-11-21 16:46:35,443 | INFO     | . Timing measurements:
[2025-11-21 17:48:13] 2025-11-21 16:46:35,444 | INFO     | . get job = 0 s
[2025-11-21 17:48:13] 2025-11-21 16:46:35,444 | INFO     | . initial setup = 1 s
[2025-11-21 17:48:13] 2025-11-21 16:46:35,444 | INFO     | . payload setup = 17 s
[2025-11-21 17:48:13] 2025-11-21 16:46:35,444 | INFO     | . stage-in = 0 s
[2025-11-21 17:48:13] 2025-11-21 16:46:35,444 | INFO     | . payload execution = 63866 s
[2025-11-21 17:48:13] 2025-11-21 16:46:35,444 | INFO     | . stage-out = 3 s
[2025-11-21 17:48:13] 2025-11-21 16:46:35,444 | INFO     | . log creation = 1 s
[2025-11-21 17:48:13] 2025-11-21 16:46:35,444 | INFO     | ..............................
[2025-11-21 17:48:13] 2025-11-21 16:46:35,557 | INFO     | 
[2025-11-21 17:48:13] 2025-11-21 16:46:35,558 | INFO     | job summary report
[2025-11-21 17:48:13] 2025-11-21 16:46:35,558 | INFO     | --------------------------------------------------
[2025-11-21 17:48:13] 2025-11-21 16:46:35,558 | INFO     | PanDA job id: 6893857658
[2025-11-21 17:48:13] 2025-11-21 16:46:35,558 | INFO     | task id: 47523449
[2025-11-21 17:48:13] 2025-11-21 16:46:35,558 | INFO     | errors: (none)
[2025-11-21 17:48:13] 2025-11-21 16:46:35,558 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-21 17:48:13] 2025-11-21 16:46:35,558 | INFO     | pilot state: finished 
[2025-11-21 17:48:13] 2025-11-21 16:46:35,558 | INFO     | transexitcode: 0
[2025-11-21 17:48:13] 2025-11-21 16:46:35,558 | INFO     | exeerrorcode: 0
[2025-11-21 17:48:13] 2025-11-21 16:46:35,558 | INFO     | exeerrordiag: 
[2025-11-21 17:48:13] 2025-11-21 16:46:35,559 | INFO     | exitcode: 0
[2025-11-21 17:48:13] 2025-11-21 16:46:35,559 | INFO     | exitmsg: OK
[2025-11-21 17:48:13] 2025-11-21 16:46:35,559 | INFO     | cpuconsumptiontime: 237965 s
[2025-11-21 17:48:13] 2025-11-21 16:46:35,559 | INFO     | nevents: 1000
[2025-11-21 17:48:13] 2025-11-21 16:46:35,559 | INFO     | neventsw: 0
[2025-11-21 17:48:13] 2025-11-21 16:46:35,559 | INFO     | pid: 3545891
[2025-11-21 17:48:13] 2025-11-21 16:46:35,559 | INFO     | pgrp: 3545891
[2025-11-21 17:48:13] 2025-11-21 16:46:35,559 | INFO     | corecount: 4
[2025-11-21 17:48:13] 2025-11-21 16:46:35,559 | INFO     | event service: False
[2025-11-21 17:48:13] 2025-11-21 16:46:35,559 | INFO     | sizes: {0: 2298648, 1: 2298847, 12: 2298847, 15: 2299137, 22: 2299165, 63888: 2354801, 63892: 2363819, 63894: 2363875, 63907: 2364121}
[2025-11-21 17:48:13] 2025-11-21 16:46:35,559 | INFO     | --------------------------------------------------
[2025-11-21 17:48:13] 2025-11-21 16:46:35,560 | INFO     | 
[2025-11-21 17:48:13] 2025-11-21 16:46:35,560 | INFO     | executing command: ls -lF /scratch/boinc/var/slot112/slots/0
[2025-11-21 17:48:13] 2025-11-21 16:46:35,607 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-21 17:48:13] 2025-11-21 16:46:35,607 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-21 17:48:13] 2025-11-21 16:46:35,607 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-21 17:48:13] 2025-11-21 16:46:35,607 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-21 17:48:13] 2025-11-21 16:46:35,607 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-21 17:48:13] 2025-11-21 16:46:35,607 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-21 17:48:13] 2025-11-21 16:46:35,607 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-21 17:48:13] 2025-11-21 16:46:35,608 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-21 17:48:13] 2025-11-21 16:46:35,608 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-21 17:48:13] 2025-11-21 16:46:35,608 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-21 17:48:13] 2025-11-21 16:46:35,608 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-21 17:48:13] 2025-11-21 16:46:35,608 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-21 17:48:13] 2025-11-21 16:46:35,608 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-21 17:48:13] 2025-11-21 16:46:35,608 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-21 17:48:13] 2025-11-21 16:46:35,608 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-21 17:48:13] 2025-11-21 16:46:35,608 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-21 17:48:13] 2025-11-21 16:46:35,608 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-21 17:48:13] 2025-11-21 16:46:35,608 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-21 17:48:13] 2025-11-21 16:46:35,609 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-21 17:48:13] 2025-11-21 16:46:35,609 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-21 17:48:13] 2025-11-21 16:46:35,609 | INFO     | job 6893857658 has completed (purged errors)
[2025-11-21 17:48:13] 2025-11-21 16:46:35,609 | INFO     | overall cleanup function is called
[2025-11-21 17:48:13] 2025-11-21 16:46:36,628 | INFO     | --- collectZombieJob: --- 10, [3545891]
[2025-11-21 17:48:13] 2025-11-21 16:46:36,629 | INFO     | zombie collector waiting for pid 3545891
[2025-11-21 17:48:13] 2025-11-21 16:46:36,629 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-21 17:48:13] 2025-11-21 16:46:36,629 | INFO     | collected zombie processes
[2025-11-21 17:48:13] 2025-11-21 16:46:36,629 | INFO     | will attempt to kill all subprocesses of pid=3545891
[2025-11-21 17:48:13] 2025-11-21 16:46:37,615 | INFO     | process IDs to be killed: [3545891] (in reverse order)
[2025-11-21 17:48:13] 2025-11-21 16:46:37,950 | WARNING  | found no corresponding commands to process id(s)
[2025-11-21 17:48:13] 2025-11-21 16:46:37,951 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-21 17:48:13] 2025-11-21 16:46:37,989 | INFO     | did not find any defunct processes belonging to 3545891
[2025-11-21 17:48:13] 2025-11-21 16:46:38,022 | INFO     | did not find any defunct processes belonging to 3545891
[2025-11-21 17:48:13] 2025-11-21 16:46:38,026 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-21 17:48:13] 2025-11-21 16:46:38,026 | INFO     | ready for new job
[2025-11-21 17:48:13] 2025-11-21 16:46:38,026 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-21 17:48:13] 2025-11-21 16:46:38,033 | INFO     | ***************************************
[2025-11-21 17:48:13] 2025-11-21 16:46:38,033 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-21 17:48:13] 2025-11-21 16:46:38,033 | INFO     | ***************************************
[2025-11-21 17:48:13] 2025-11-21 16:46:38,033 | INFO     | 
[2025-11-21 17:48:13] 2025-11-21 16:46:38,042 | INFO     | architecture information:
[2025-11-21 17:48:13] 2025-11-21 16:46:38,042 | INFO     | executing command: cat /etc/os-release
[2025-11-21 17:48:13] 2025-11-21 16:46:38,071 | INFO     | cat /etc/os-release:
[2025-11-21 17:48:13] NAME="CentOS Linux"
[2025-11-21 17:48:13] VERSION="7 (Core)"
[2025-11-21 17:48:13] ID="centos"
[2025-11-21 17:48:13] ID_LIKE="rhel fedora"
[2025-11-21 17:48:13] VERSION_ID="7"
[2025-11-21 17:48:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-21 17:48:13] ANSI_COLOR="0;31"
[2025-11-21 17:48:13] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-21 17:48:13] HOME_URL="https://www.centos.org/"
[2025-11-21 17:48:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-21 17:48:13] 
[2025-11-21 17:48:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-21 17:48:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-21 17:48:13] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-21 17:48:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-21 17:48:13] 
[2025-11-21 17:48:13] 2025-11-21 16:46:38,071 | INFO     | ***************************************
[2025-11-21 17:48:13] 2025-11-21 16:46:38,574 | INFO     | executing command: df -mP /scratch/boinc/var/slot112/slots/0
[2025-11-21 17:48:13] 2025-11-21 16:46:38,596 | INFO     | sufficient remaining disk space (3291770519552 B)
[2025-11-21 17:48:13] 2025-11-21 16:46:38,597 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-21 17:48:13] 2025-11-21 16:46:38,597 | INFO     | current server update state: UPDATING_FINAL
[2025-11-21 17:48:13] 2025-11-21 16:46:38,597 | INFO     | update_server=False
[2025-11-21 17:48:13] 2025-11-21 16:46:38,597 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-21 17:48:13] 2025-11-21 16:46:38,658 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-21 17:48:13] 2025-11-21 16:46:38,659 | INFO     | all job control threads have been joined
[2025-11-21 17:48:13] 2025-11-21 16:46:39,191 | INFO     | all data control threads have been joined
[2025-11-21 17:48:13] 2025-11-21 16:46:39,332 | INFO     | all payload control threads have been joined
[2025-11-21 17:48:13] 2025-11-21 16:46:39,464 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-21 17:48:13] 2025-11-21 16:46:39,465 | INFO     | aborting loop
[2025-11-21 17:48:13] 2025-11-21 16:46:39,602 | INFO     | [job] retrieve thread has finished
[2025-11-21 17:48:13] 2025-11-21 16:46:39,664 | INFO     | [job] control thread has finished
[2025-11-21 17:48:13] 2025-11-21 16:46:39,824 | INFO     | [job] create_data_payload thread has finished
[2025-11-21 17:48:13] 2025-11-21 16:46:39,986 | INFO     | [payload] failed_post thread has finished
[2025-11-21 17:48:13] 2025-11-21 16:46:40,197 | INFO     | [data] control thread has finished
[2025-11-21 17:48:13] 2025-11-21 16:46:40,269 | INFO     | [payload] validate_post thread has finished
[2025-11-21 17:48:13] 2025-11-21 16:46:40,279 | INFO     | [monitor] cgroup control has ended
[2025-11-21 17:48:13] 2025-11-21 16:46:40,309 | INFO     | [job] validate thread has finished
[2025-11-21 17:48:13] 2025-11-21 16:46:40,310 | INFO     | [payload] execute_payloads thread has finished
[2025-11-21 17:48:13] 2025-11-21 16:46:40,337 | INFO     | [payload] control thread has finished
[2025-11-21 17:48:13] 2025-11-21 16:46:40,469 | INFO     | [job] job monitor thread has finished
[2025-11-21 17:48:13] 2025-11-21 16:46:40,541 | INFO     | [data] copytool_in thread has finished
[2025-11-21 17:48:13] 2025-11-21 16:46:40,568 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-21 17:48:13] 2025-11-21 16:46:40,628 | INFO     | [payload] validate_pre thread has finished
[2025-11-21 17:48:13] 2025-11-21 16:46:40,663 | INFO     | [data] copytool_out thread has finished
[2025-11-21 17:48:13] 2025-11-21 16:46:41,572 | INFO     | [job] queue monitor thread has finished
[2025-11-21 17:48:13] 2025-11-21 16:46:42,090 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-21 17:48:13] 2025-11-21 16:46:46,095 | INFO     | [data] queue_monitor thread has finished
[2025-11-21 17:48:13] 2025-11-21 16:46:49,431 | INFO     | job.realtimelogging is not enabled
[2025-11-21 17:48:13] 2025-11-21 16:46:50,436 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-21 17:48:13] 2025-11-21 16:46:51,993 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22549520205632)>', '<ExcThread(monitor, started 22549264004864)>']
[2025-11-21 17:48:13] 2025-11-21 16:46:57,018 | INFO     | all workflow threads have been joined
[2025-11-21 17:48:13] 2025-11-21 16:46:57,019 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-21 17:48:13] 2025-11-21 16:46:57,019 | INFO     | traces error code: 0
[2025-11-21 17:48:13] 2025-11-21 16:46:57,019 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-21 17:48:13] 2025-11-21 16:47:08,166 | INFO     | PID=3538471 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-21 17:48:13] 2025-11-21 16:47:08,166 | INFO     | .. there are 11 such processes running
[2025-11-21 17:48:13] 2025-11-21 16:47:08,166 | INFO     | found 0 job(s) in 20 queues
[2025-11-21 17:48:13] 2025-11-21 16:47:08,166 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-21 17:48:13] 2025-11-21 16:47:08,166 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-21 17:48:13] 2025-11-21 16:47:08,167 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-21 17:48:13] 2025-11-21 16:47:08,167 | INFO     | [monitor] control thread has ended
[2025-11-21 17:48:13] 2025-11-21 16:47:08,326 [wrapper] ==== pilot stdout END ====
[2025-11-21 17:48:13] 2025-11-21 16:47:08,330 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-21 17:48:13] 2025-11-21 16:47:08,337 [wrapper] pilotpid: 3538471
[2025-11-21 17:48:13] 2025-11-21 16:47:08,355 [wrapper] Pilot exit status: 0
[2025-11-21 17:48:13] 2025-11-21 16:47:08,391 [wrapper] pandaids: 6893857658
[2025-11-21 17:48:13] 2025-11-21 16:47:08,624 [wrapper] cleanup supervisor_pilot 1082441 3538472
[2025-11-21 17:48:13] 2025-11-21 16:47:08,629 [wrapper] Test setup, not cleaning
[2025-11-21 17:48:13] 2025-11-21 16:47:08,633 [wrapper] apfmon messages muted
[2025-11-21 17:48:13] 2025-11-21 16:47:08,637 [wrapper] ==== wrapper stdout END ====
[2025-11-21 17:48:13] 2025-11-21 16:47:08,642 [wrapper] ==== wrapper stderr END ====
[2025-11-21 17:48:13]  *** Error codes and diagnostics ***
[2025-11-21 17:48:13]     "exeErrorCode": 0,
[2025-11-21 17:48:13]     "exeErrorDiag": "",
[2025-11-21 17:48:13]     "pilotErrorCode": 0,
[2025-11-21 17:48:13]     "pilotErrorDiag": "",
[2025-11-21 17:48:13]  *** Listing of results directory ***
[2025-11-21 17:48:13] total 1334292
[2025-11-21 17:48:13] -rw-r--r-- 1 boinc boinc    576529 Nov 20 14:01 pilot3.tar.gz
[2025-11-21 17:48:13] -rwx------ 1 boinc boinc     36292 Nov 20 14:08 runpilot2-wrapper.sh
[2025-11-21 17:48:13] -rw-r--r-- 1 boinc boinc      5112 Nov 20 14:08 queuedata.json
[2025-11-21 17:48:13] -rw-r--r-- 1 boinc boinc       100 Nov 20 22:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-21 17:48:13] -rwxr-xr-x 1 boinc boinc      7986 Nov 20 22:21 run_atlas
[2025-11-21 17:48:13] -rw-r--r-- 1 boinc boinc       105 Nov 20 22:21 job.xml
[2025-11-21 17:48:13] -rw-r--r-- 2 boinc boinc 411066692 Nov 21 00:00 EVNT.47493127._000496.pool.root.1
[2025-11-21 17:48:13] -rw-r--r-- 1 boinc boinc      6687 Nov 21 00:00 init_data.xml
[2025-11-21 17:48:13] -rw-r--r-- 2 boinc boinc     15847 Nov 21 00:00 start_atlas.sh
[2025-11-21 17:48:13] drwxrwx--x 2 boinc boinc      4096 Nov 21 00:00 shared
[2025-11-21 17:48:13] -rw-r--r-- 2 boinc boinc    590100 Nov 21 00:00 input.tar.gz
[2025-11-21 17:48:13] -rw-r--r-- 1 boinc boinc         0 Nov 21 00:00 boinc_lockfile
[2025-11-21 17:48:13] -rw-r--r-- 1 boinc boinc      2786 Nov 21 00:00 pandaJob.out
[2025-11-21 17:48:13] -rw------- 1 boinc boinc    989825 Nov 21 00:00 agis_schedconf.cvmfs.json
[2025-11-21 17:48:13] drwx------ 5 boinc boinc      4096 Nov 21 00:00 pilot3
[2025-11-21 17:48:13] -rw-r--r-- 1 boinc boinc       532 Nov 21 17:41 boinc_task_state.xml
[2025-11-21 17:48:13] -rw------- 1 boinc boinc 930946745 Nov 21 17:45 HITS.47523449._004959.pool.root.1
[2025-11-21 17:48:13] -rw------- 1 boinc boinc      1039 Nov 21 17:46 memory_monitor_summary.json
[2025-11-21 17:48:13] -rw------- 1 boinc boinc        95 Nov 21 17:46 pilot_heartbeat.json
[2025-11-21 17:48:13] -rw------- 1 boinc boinc   1526164 Nov 21 17:46 agis_ddmendpoints.agis.ALL.json
[2025-11-21 17:48:13] -rw------- 1 boinc boinc   1736844 Nov 21 17:46 log.47523449._004959.job.log.tgz.1
[2025-11-21 17:48:13] -rw------- 1 boinc boinc      8592 Nov 21 17:46 heartbeat.json
[2025-11-21 17:48:13] -rw------- 1 boinc boinc       823 Nov 21 17:47 pilotlog.txt
[2025-11-21 17:48:13] -rw------- 1 boinc boinc   8450068 Nov 21 17:47 log.47523449._004959.job.log.1
[2025-11-21 17:48:13] -rw------- 1 boinc boinc       353 Nov 21 17:47 output.list
[2025-11-21 17:48:13] -rw-r--r-- 1 boinc boinc       620 Nov 21 17:47 runtime_log
[2025-11-21 17:48:13] -rw------- 1 boinc boinc  10209280 Nov 21 17:47 result.tar.gz
[2025-11-21 17:48:13] -rw------- 1 boinc boinc       670 Nov 21 17:47 yjcMDmQZJg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmvgGKDmC38EMm.diag
[2025-11-21 17:48:13] -rw-r--r-- 1 boinc boinc      9223 Nov 21 17:47 runtime_log.err
[2025-11-21 17:48:13] -rw-r--r-- 1 boinc boinc        28 Nov 21 17:47 wrapper_checkpoint.txt
[2025-11-21 17:48:13] -rw-r--r-- 1 boinc boinc      8192 Nov 21 17:48 boinc_mmap_file
[2025-11-21 17:48:13] -rw-r--r-- 1 boinc boinc     21118 Nov 21 17:48 stderr.txt
[2025-11-21 17:48:13] HITS file was successfully produced:
[2025-11-21 17:48:13] -rw------- 1 boinc boinc 930946745 Nov 21 17:45 shared/HITS.pool.root.1
[2025-11-21 17:48:13]  *** Contents of shared directory: ***
[2025-11-21 17:48:13] total 1321140
[2025-11-21 17:48:13] -rw-r--r-- 2 boinc boinc 411066692 Nov 21 00:00 ATLAS.root_0
[2025-11-21 17:48:13] -rw-r--r-- 2 boinc boinc     15847 Nov 21 00:00 start_atlas.sh
[2025-11-21 17:48:13] -rw-r--r-- 2 boinc boinc    590100 Nov 21 00:00 input.tar.gz
[2025-11-21 17:48:13] -rw------- 1 boinc boinc 930946745 Nov 21 17:45 HITS.pool.root.1
[2025-11-21 17:48:13] -rw------- 1 boinc boinc  10209280 Nov 21 17:47 result.tar.gz
17:48:14 (3533858): run_atlas exited; CPU time 240869.302274
17:48:14 (3533858): called boinc_finish(0)

</stderr_txt>
]]>

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