Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:48:24 (1090411): wrapper (7.7.26015): starting
17:48:24 (1090411): wrapper: running run_atlas (--nthreads 4)
[2025-11-21 17:48:24] Arguments: --nthreads 4
[2025-11-21 17:48:24] Threads: 4
[2025-11-21 17:48:24] Checking for CVMFS
[2025-11-21 17:48:24] No cvmfs_config command found, will try listing directly
[2025-11-21 17:48:24] CVMFS is ok
[2025-11-21 17:48:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 17:48:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 17:48:24] Further information can be found at the LHC@home message board.
[2025-11-21 17:48:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 17:48:24] Checking for apptainer binary...
[2025-11-21 17:48:24] which: no apptainer in ((null))
[2025-11-21 17:48:24] apptainer is not installed, using version from CVMFS
[2025-11-21 17:48:24] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 17:48:25] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot112/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2025-11-21 17:48:25] apptainer works
[2025-11-21 17:48:25] Set ATHENA_PROC_NUMBER=4
[2025-11-21 17:48:25] Set ATHENA_CORE_NUMBER=4
[2025-11-21 17:48:25] Starting ATLAS job with PandaID=6893857450
[2025-11-21 17:48:25] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot112/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 10:53:47]  *** The last 200 lines of the pilot log: ***
[2025-11-22 10:53:47] 2025-11-22 09:50:19,817 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2731.589656250001
[2025-11-22 10:53:47] 2025-11-22 09:50:19,889 | INFO     | time since job start (61282s) is within the limit (172800.0s)
[2025-11-22 10:53:47] 2025-11-22 09:50:19,891 | INFO     | using path: /scratch/boinc/var/slot112/slots/0/PanDA_Pilot-6893857450/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 10:53:47] 2025-11-22 09:50:19,892 | INFO     | extracted standard info from prmon json
[2025-11-22 10:53:47] 2025-11-22 09:50:19,892 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 10:53:47] 2025-11-22 09:50:19,892 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 10:53:47] 2025-11-22 09:50:19,944 | INFO     | fitting pss+swap vs Time
[2025-11-22 10:53:47] 2025-11-22 09:50:19,948 | INFO     | sum of square deviations: 312877677128.1712
[2025-11-22 10:53:47] 2025-11-22 09:50:19,973 | INFO     | sum of deviations: 1065924175348.0797
[2025-11-22 10:53:47] 2025-11-22 09:50:19,973 | INFO     | mean x: 1763774388.1256232
[2025-11-22 10:53:47] 2025-11-22 09:50:19,974 | INFO     | mean y: 2272154.8723828513
[2025-11-22 10:53:47] 2025-11-22 09:50:19,974 | INFO     | intersect: -6006624924.073588
[2025-11-22 10:53:47] 2025-11-22 09:50:19,974 | INFO     | chi2: 4.422269172093391
[2025-11-22 10:53:47] 2025-11-22 09:50:19,975 | INFO     | sum of square deviations: 308221805005.5923
[2025-11-22 10:53:47] 2025-11-22 09:50:20,008 | INFO     | sum of deviations: 1277473728167.3298
[2025-11-22 10:53:47] 2025-11-22 09:50:20,008 | INFO     | mean x: 1763774235.6262524
[2025-11-22 10:53:47] 2025-11-22 09:50:20,008 | INFO     | mean y: 2279081.7354709418
[2025-11-22 10:53:47] 2025-11-22 09:50:20,008 | INFO     | intersect: -7307960530.903455
[2025-11-22 10:53:47] 2025-11-22 09:50:20,009 | INFO     | chi2: 2.231126514690072
[2025-11-22 10:53:47] 2025-11-22 09:50:20,009 | INFO     | current chi2=2.231126514690072 (change=49.54792601116334 %)
[2025-11-22 10:53:47] 2025-11-22 09:50:20,010 | INFO     | sum of square deviations: 303612352358.01306
[2025-11-22 10:53:47] 2025-11-22 09:50:20,028 | INFO     | sum of deviations: 1286995714243.709
[2025-11-22 10:53:47] 2025-11-22 09:50:20,028 | INFO     | mean x: 1763774083.1268883
[2025-11-22 10:53:47] 2025-11-22 09:50:20,028 | INFO     | mean y: 2279394.288016113
[2025-11-22 10:53:47] 2025-11-22 09:50:20,028 | INFO     | intersect: -7474259910.679832
[2025-11-22 10:53:47] 2025-11-22 09:50:20,029 | INFO     | chi2: 2.1681168321994084
[2025-11-22 10:53:47] 2025-11-22 09:50:20,029 | INFO     | current chi2=2.1681168321994084 (change=2.8241196577512935 %)
[2025-11-22 10:53:47] 2025-11-22 09:50:20,029 | INFO     | right removable region: 992
[2025-11-22 10:53:47] 2025-11-22 09:50:20,030 | INFO     | sum of square deviations: 308221789083.84375
[2025-11-22 10:53:47] 2025-11-22 09:50:20,047 | INFO     | sum of deviations: 860258693292.9689
[2025-11-22 10:53:47] 2025-11-22 09:50:20,047 | INFO     | mean x: 1763774540.6252506
[2025-11-22 10:53:47] 2025-11-22 09:50:20,047 | INFO     | mean y: 2278882.628256513
[2025-11-22 10:53:47] 2025-11-22 09:50:20,047 | INFO     | intersect: -4920482697.893689
[2025-11-22 10:53:47] 2025-11-22 09:50:20,048 | INFO     | chi2: 2.369141243021799
[2025-11-22 10:53:47] 2025-11-22 09:50:20,048 | INFO     | current chi2=2.369141243021799 (change=46.42702307737846 %)
[2025-11-22 10:53:47] 2025-11-22 09:50:20,049 | INFO     | sum of square deviations: 303612503512.258
[2025-11-22 10:53:47] 2025-11-22 09:50:20,069 | INFO     | sum of deviations: 815862482946.9337
[2025-11-22 10:53:47] 2025-11-22 09:50:20,069 | INFO     | mean x: 1763774693.1218529
[2025-11-22 10:53:47] 2025-11-22 09:50:20,069 | INFO     | mean y: 2280351.058408862
[2025-11-22 10:53:47] 2025-11-22 09:50:20,070 | INFO     | intersect: -4737305745.833886
[2025-11-22 10:53:47] 2025-11-22 09:50:20,070 | INFO     | chi2: 2.3272447781590686
[2025-11-22 10:53:47] 2025-11-22 09:50:20,071 | INFO     | current chi2=2.3272447781590686 (change=1.7684241066730257 %)
[2025-11-22 10:53:47] 2025-11-22 09:50:20,071 | INFO     | left removable region: 20
[2025-11-22 10:53:47] 2025-11-22 09:50:20,072 | INFO     | sum of square deviations: 284754599399.1563
[2025-11-22 10:53:47] 2025-11-22 09:50:20,094 | INFO     | sum of deviations: 976860699320.0732
[2025-11-22 10:53:47] 2025-11-22 09:50:20,095 | INFO     | mean x: 1763774662.6193416
[2025-11-22 10:53:47] 2025-11-22 09:50:20,095 | INFO     | mean y: 2289633.08127572
[2025-11-22 10:53:47] 2025-11-22 09:50:20,095 | INFO     | intersect: -6048401572.626642
[2025-11-22 10:53:47] 2025-11-22 09:50:20,096 | INFO     | chi2: 0.04422381563817275
[2025-11-22 10:53:47] 2025-11-22 09:50:20,097 | INFO     | current memory leak: 3.43 B/s (using 972 data points, chi2=0.04)
[2025-11-22 10:53:47] 2025-11-22 09:50:20,100 | INFO     | could have reported an average CPU frequency of 2700 MHz (37 samples)
[2025-11-22 10:53:47] 2025-11-22 09:50:20,100 | INFO     | ..............................
[2025-11-22 10:53:47] 2025-11-22 09:50:20,100 | INFO     | . Timing measurements:
[2025-11-22 10:53:47] 2025-11-22 09:50:20,100 | INFO     | . get job = 0 s
[2025-11-22 10:53:47] 2025-11-22 09:50:20,100 | INFO     | . initial setup = 2 s
[2025-11-22 10:53:47] 2025-11-22 09:50:20,101 | INFO     | . payload setup = 25 s
[2025-11-22 10:53:47] 2025-11-22 09:50:20,101 | INFO     | . stage-in = 0 s
[2025-11-22 10:53:47] 2025-11-22 09:50:20,101 | INFO     | . payload execution = 61189 s
[2025-11-22 10:53:47] 2025-11-22 09:50:20,101 | INFO     | . stage-out = 2 s
[2025-11-22 10:53:47] 2025-11-22 09:50:20,101 | INFO     | . log creation = 0 s
[2025-11-22 10:53:47] 2025-11-22 09:50:20,101 | INFO     | ..............................
[2025-11-22 10:53:47] 2025-11-22 09:50:20,246 | INFO     | 
[2025-11-22 10:53:47] 2025-11-22 09:50:20,246 | INFO     | job summary report
[2025-11-22 10:53:47] 2025-11-22 09:50:20,246 | INFO     | --------------------------------------------------
[2025-11-22 10:53:47] 2025-11-22 09:50:20,246 | INFO     | PanDA job id: 6893857450
[2025-11-22 10:53:47] 2025-11-22 09:50:20,246 | INFO     | task id: 47523449
[2025-11-22 10:53:47] 2025-11-22 09:50:20,247 | INFO     | errors: (none)
[2025-11-22 10:53:47] 2025-11-22 09:50:20,247 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 10:53:47] 2025-11-22 09:50:20,247 | INFO     | pilot state: finished 
[2025-11-22 10:53:47] 2025-11-22 09:50:20,247 | INFO     | transexitcode: 0
[2025-11-22 10:53:47] 2025-11-22 09:50:20,247 | INFO     | exeerrorcode: 0
[2025-11-22 10:53:47] 2025-11-22 09:50:20,247 | INFO     | exeerrordiag: 
[2025-11-22 10:53:47] 2025-11-22 09:50:20,247 | INFO     | exitcode: 0
[2025-11-22 10:53:47] 2025-11-22 09:50:20,247 | INFO     | exitmsg: OK
[2025-11-22 10:53:47] 2025-11-22 09:50:20,247 | INFO     | cpuconsumptiontime: 230347 s
[2025-11-22 10:53:47] 2025-11-22 09:50:20,247 | INFO     | nevents: 1000
[2025-11-22 10:53:47] 2025-11-22 09:50:20,247 | INFO     | neventsw: 0
[2025-11-22 10:53:47] 2025-11-22 09:50:20,247 | INFO     | pid: 1104488
[2025-11-22 10:53:47] 2025-11-22 09:50:20,248 | INFO     | pgrp: 1104488
[2025-11-22 10:53:47] 2025-11-22 09:50:20,248 | INFO     | corecount: 4
[2025-11-22 10:53:47] 2025-11-22 09:50:20,248 | INFO     | event service: False
[2025-11-22 10:53:47] 2025-11-22 09:50:20,248 | INFO     | sizes: {0: 2298648, 1: 2298847, 11: 2298847, 21: 2299137, 22: 2299165, 61218: 2354441, 61222: 2363459, 61224: 2363543, 61239: 2363789}
[2025-11-22 10:53:47] 2025-11-22 09:50:20,248 | INFO     | --------------------------------------------------
[2025-11-22 10:53:47] 2025-11-22 09:50:20,248 | INFO     | 
[2025-11-22 10:53:47] 2025-11-22 09:50:20,248 | INFO     | executing command: ls -lF /scratch/boinc/var/slot112/slots/0
[2025-11-22 10:53:47] 2025-11-22 09:50:20,280 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 10:53:47] 2025-11-22 09:50:20,280 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 10:53:47] 2025-11-22 09:50:20,281 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 10:53:47] 2025-11-22 09:50:20,281 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 10:53:47] 2025-11-22 09:50:20,281 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 10:53:47] 2025-11-22 09:50:20,281 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 10:53:47] 2025-11-22 09:50:20,281 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 10:53:47] 2025-11-22 09:50:20,281 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 10:53:47] 2025-11-22 09:50:20,281 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 10:53:47] 2025-11-22 09:50:20,281 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 10:53:47] 2025-11-22 09:50:20,281 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 10:53:47] 2025-11-22 09:50:20,281 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 10:53:47] 2025-11-22 09:50:20,282 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 10:53:47] 2025-11-22 09:50:20,282 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 10:53:47] 2025-11-22 09:50:20,282 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 10:53:47] 2025-11-22 09:50:20,282 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 10:53:47] 2025-11-22 09:50:20,282 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 10:53:47] 2025-11-22 09:50:20,282 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 10:53:47] 2025-11-22 09:50:20,282 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 10:53:47] 2025-11-22 09:50:20,282 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 10:53:47] 2025-11-22 09:50:20,282 | INFO     | job 6893857450 has completed (purged errors)
[2025-11-22 10:53:47] 2025-11-22 09:50:20,282 | INFO     | overall cleanup function is called
[2025-11-22 10:53:47] 2025-11-22 09:50:21,303 | INFO     | --- collectZombieJob: --- 10, [1104488]
[2025-11-22 10:53:47] 2025-11-22 09:50:21,304 | INFO     | zombie collector waiting for pid 1104488
[2025-11-22 10:53:47] 2025-11-22 09:50:21,304 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 10:53:47] 2025-11-22 09:50:21,304 | INFO     | collected zombie processes
[2025-11-22 10:53:47] 2025-11-22 09:50:21,304 | INFO     | will attempt to kill all subprocesses of pid=1104488
[2025-11-22 10:53:47] 2025-11-22 09:50:22,095 | INFO     | process IDs to be killed: [1104488] (in reverse order)
[2025-11-22 10:53:47] 2025-11-22 09:50:22,343 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 10:53:47] 2025-11-22 09:50:22,343 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 10:53:47] 2025-11-22 09:50:22,377 | INFO     | did not find any defunct processes belonging to 1104488
[2025-11-22 10:53:47] 2025-11-22 09:50:22,409 | INFO     | did not find any defunct processes belonging to 1104488
[2025-11-22 10:53:47] 2025-11-22 09:50:22,412 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 10:53:47] 2025-11-22 09:50:22,412 | INFO     | ready for new job
[2025-11-22 10:53:47] 2025-11-22 09:50:22,412 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 10:53:47] 2025-11-22 09:50:22,418 | INFO     | ***************************************
[2025-11-22 10:53:47] 2025-11-22 09:50:22,418 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 10:53:47] 2025-11-22 09:50:22,418 | INFO     | ***************************************
[2025-11-22 10:53:47] 2025-11-22 09:50:22,418 | INFO     | 
[2025-11-22 10:53:47] 2025-11-22 09:50:22,427 | INFO     | architecture information:
[2025-11-22 10:53:47] 2025-11-22 09:50:22,432 | INFO     | executing command: cat /etc/os-release
[2025-11-22 10:53:47] 2025-11-22 09:50:22,457 | INFO     | cat /etc/os-release:
[2025-11-22 10:53:47] NAME="CentOS Linux"
[2025-11-22 10:53:47] VERSION="7 (Core)"
[2025-11-22 10:53:47] ID="centos"
[2025-11-22 10:53:47] ID_LIKE="rhel fedora"
[2025-11-22 10:53:47] VERSION_ID="7"
[2025-11-22 10:53:47] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 10:53:47] ANSI_COLOR="0;31"
[2025-11-22 10:53:47] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 10:53:47] HOME_URL="https://www.centos.org/"
[2025-11-22 10:53:47] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 10:53:47] 
[2025-11-22 10:53:47] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 10:53:47] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 10:53:47] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 10:53:47] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 10:53:47] 
[2025-11-22 10:53:47] 2025-11-22 09:50:22,458 | INFO     | ***************************************
[2025-11-22 10:53:47] 2025-11-22 09:50:22,961 | INFO     | executing command: df -mP /scratch/boinc/var/slot112/slots/0
[2025-11-22 10:53:47] 2025-11-22 09:50:22,994 | INFO     | sufficient remaining disk space (3290366476288 B)
[2025-11-22 10:53:47] 2025-11-22 09:50:22,995 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 10:53:47] 2025-11-22 09:50:22,995 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 10:53:47] 2025-11-22 09:50:22,995 | INFO     | update_server=False
[2025-11-22 10:53:47] 2025-11-22 09:50:22,995 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 10:53:47] 2025-11-22 09:50:22,995 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 10:53:47] 2025-11-22 09:50:23,138 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-22 10:53:47] 2025-11-22 09:50:23,139 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-22 10:53:47] 2025-11-22 09:50:23,139 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 10:53:47] 2025-11-22 09:50:23,139 | INFO     | will abort loop
[2025-11-22 10:53:47] 2025-11-22 09:50:23,376 | INFO     | all job control threads have been joined
[2025-11-22 10:53:47] 2025-11-22 09:50:23,524 | INFO     | all data control threads have been joined
[2025-11-22 10:53:47] 2025-11-22 09:50:23,999 | INFO     | [job] retrieve thread has finished
[2025-11-22 10:53:47] 2025-11-22 09:50:24,144 | INFO     | [job] job monitor thread has finished
[2025-11-22 10:53:47] 2025-11-22 09:50:24,187 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 10:53:47] 2025-11-22 09:50:24,285 | INFO     | all payload control threads have been joined
[2025-11-22 10:53:47] 2025-11-22 09:50:24,381 | INFO     | [job] control thread has finished
[2025-11-22 10:53:47] 2025-11-22 09:50:24,529 | INFO     | [data] control thread has finished
[2025-11-22 10:53:47] 2025-11-22 09:50:24,558 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 10:53:47] 2025-11-22 09:50:24,972 | INFO     | [job] validate thread has finished
[2025-11-22 10:53:47] 2025-11-22 09:50:25,001 | INFO     | [data] copytool_out thread has finished
[2025-11-22 10:53:47] 2025-11-22 09:50:25,255 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 10:53:47] 2025-11-22 09:50:25,257 | INFO     | [data] copytool_in thread has finished
[2025-11-22 10:53:47] 2025-11-22 09:50:25,281 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 10:53:47] 2025-11-22 09:50:25,290 | INFO     | [payload] control thread has finished
[2025-11-22 10:53:47] 2025-11-22 09:50:25,389 | INFO     | [payload] validate_post thread has finished
[2025-11-22 10:53:47] 2025-11-22 09:50:25,402 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 10:53:47] 2025-11-22 09:50:25,564 | INFO     | [payload] failed_post thread has finished
[2025-11-22 10:53:47] 2025-11-22 09:50:26,261 | INFO     | [job] queue monitor thread has finished
[2025-11-22 10:53:47] 2025-11-22 09:50:28,563 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 10:53:47] 2025-11-22 09:50:33,153 | INFO     | job.realtimelogging is not enabled
[2025-11-22 10:53:47] 2025-11-22 09:50:34,158 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 10:53:47] 2025-11-22 09:50:40,715 | INFO     | [monitor] cgroup control has ended
[2025-11-22 10:53:47] 2025-11-22 09:50:42,148 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22983360493376)>', '<ExcThread(monitor, started 22983124948736)>']
[2025-11-22 10:53:47] 2025-11-22 09:50:47,173 | INFO     | all workflow threads have been joined
[2025-11-22 10:53:47] 2025-11-22 09:50:47,176 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 10:53:47] 2025-11-22 09:50:47,177 | INFO     | traces error code: 0
[2025-11-22 10:53:47] 2025-11-22 09:50:47,177 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 10:53:47] 2025-11-22 09:50:53,939 | INFO     | PID=1094638 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 10:53:47] 2025-11-22 09:50:53,939 | INFO     | .. there are 7 such processes running
[2025-11-22 10:53:47] 2025-11-22 09:50:53,940 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 10:53:47] 2025-11-22 09:50:53,940 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 10:53:47] 2025-11-22 09:50:53,940 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 10:53:47] 2025-11-22 09:50:53,940 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 10:53:47] 2025-11-22 09:50:53,940 | INFO     | [monitor] control thread has ended
[2025-11-22 10:53:47] 2025-11-22 09:50:54,093 [wrapper] ==== pilot stdout END ====
[2025-11-22 10:53:47] 2025-11-22 09:50:54,097 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 10:53:47] 2025-11-22 09:50:54,100 [wrapper] pilotpid: 1094638
[2025-11-22 10:53:47] 2025-11-22 09:50:54,103 [wrapper] Pilot exit status: 0
[2025-11-22 10:53:47] 2025-11-22 09:50:54,168 [wrapper] pandaids: 6893857450
[2025-11-22 10:53:47] 2025-11-22 09:50:54,353 [wrapper] cleanup supervisor_pilot 2538510 1094639
[2025-11-22 10:53:47] 2025-11-22 09:50:54,361 [wrapper] Test setup, not cleaning
[2025-11-22 10:53:47] 2025-11-22 09:50:54,368 [wrapper] apfmon messages muted
[2025-11-22 10:53:47] 2025-11-22 09:50:54,371 [wrapper] ==== wrapper stdout END ====
[2025-11-22 10:53:47] 2025-11-22 09:50:54,375 [wrapper] ==== wrapper stderr END ====
[2025-11-22 10:53:47]  *** Error codes and diagnostics ***
[2025-11-22 10:53:47]     "exeErrorCode": 0,
[2025-11-22 10:53:47]     "exeErrorDiag": "",
[2025-11-22 10:53:47]     "pilotErrorCode": 0,
[2025-11-22 10:53:47]     "pilotErrorDiag": "",
[2025-11-22 10:53:47]  *** Listing of results directory ***
[2025-11-22 10:53:47] total 1312148
[2025-11-22 10:53:47] -rwx------ 1 boinc boinc     36292 Nov 20 14:01 runpilot2-wrapper.sh
[2025-11-22 10:53:47] -rw-r--r-- 1 boinc boinc      5112 Nov 20 14:01 queuedata.json
[2025-11-22 10:53:47] -rw-r--r-- 1 boinc boinc    576529 Nov 20 14:01 pilot3.tar.gz
[2025-11-22 10:53:47] -rw-r--r-- 1 boinc boinc       100 Nov 21 17:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 10:53:47] -rwxr-xr-x 1 boinc boinc      7986 Nov 21 17:48 run_atlas
[2025-11-22 10:53:47] -rw-r--r-- 1 boinc boinc       105 Nov 21 17:48 job.xml
[2025-11-22 10:53:47] -rw-r--r-- 1 boinc boinc      6687 Nov 21 17:48 init_data.xml
[2025-11-22 10:53:47] -rw-r--r-- 2 boinc boinc 411036958 Nov 21 17:48 EVNT.47493127._000485.pool.root.1
[2025-11-22 10:53:47] -rw-r--r-- 2 boinc boinc     15847 Nov 21 17:48 start_atlas.sh
[2025-11-22 10:53:47] drwxrwx--x 2 boinc boinc      4096 Nov 21 17:48 shared
[2025-11-22 10:53:47] -rw-r--r-- 2 boinc boinc    590101 Nov 21 17:48 input.tar.gz
[2025-11-22 10:53:47] -rw-r--r-- 1 boinc boinc         0 Nov 21 17:48 boinc_lockfile
[2025-11-22 10:53:47] -rw-r--r-- 1 boinc boinc      2786 Nov 21 17:48 pandaJob.out
[2025-11-22 10:53:47] -rw------- 1 boinc boinc    989817 Nov 21 17:48 agis_schedconf.cvmfs.json
[2025-11-22 10:53:47] drwx------ 5 boinc boinc      4096 Nov 21 17:48 pilot3
[2025-11-22 10:53:47] -rw-r--r-- 1 boinc boinc       532 Nov 22 10:42 boinc_task_state.xml
[2025-11-22 10:53:47] -rw------- 1 boinc boinc 908638458 Nov 22 10:49 HITS.47523449._004847.pool.root.1
[2025-11-22 10:53:47] -rw------- 1 boinc boinc      1039 Nov 22 10:49 memory_monitor_summary.json
[2025-11-22 10:53:47] -rw------- 1 boinc boinc   1526164 Nov 22 10:50 agis_ddmendpoints.agis.ALL.json
[2025-11-22 10:53:47] -rw------- 1 boinc boinc   1728382 Nov 22 10:50 log.47523449._004847.job.log.tgz.1
[2025-11-22 10:53:47] -rw------- 1 boinc boinc      8594 Nov 22 10:50 heartbeat.json
[2025-11-22 10:53:47] -rw------- 1 boinc boinc        95 Nov 22 10:50 pilot_heartbeat.json
[2025-11-22 10:53:47] -rw------- 1 boinc boinc       822 Nov 22 10:50 pilotlog.txt
[2025-11-22 10:53:47] -rw------- 1 boinc boinc   8294309 Nov 22 10:50 log.47523449._004847.job.log.1
[2025-11-22 10:53:47] -rw------- 1 boinc boinc       353 Nov 22 10:50 output.list
[2025-11-22 10:53:47] -rw-r--r-- 1 boinc boinc       620 Nov 22 10:50 runtime_log
[2025-11-22 10:53:47] -rw------- 1 boinc boinc  10045440 Nov 22 10:50 result.tar.gz
[2025-11-22 10:53:47] -rw-r--r-- 1 boinc boinc      9223 Nov 22 10:50 runtime_log.err
[2025-11-22 10:53:47] -rw------- 1 boinc boinc       670 Nov 22 10:50 jzNLDmKTJg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmofGKDm4gXxWm.diag
[2025-11-22 10:53:47] -rw-r--r-- 1 boinc boinc        28 Nov 22 10:53 wrapper_checkpoint.txt
[2025-11-22 10:53:47] -rw-r--r-- 1 boinc boinc      8192 Nov 22 10:53 boinc_mmap_file
[2025-11-22 10:53:47] -rw-r--r-- 1 boinc boinc     21110 Nov 22 10:53 stderr.txt
[2025-11-22 10:53:47] HITS file was successfully produced:
[2025-11-22 10:53:47] -rw------- 1 boinc boinc 908638458 Nov 22 10:49 shared/HITS.pool.root.1
[2025-11-22 10:53:47]  *** Contents of shared directory: ***
[2025-11-22 10:53:47] total 1299164
[2025-11-22 10:53:47] -rw-r--r-- 2 boinc boinc 411036958 Nov 21 17:48 ATLAS.root_0
[2025-11-22 10:53:47] -rw-r--r-- 2 boinc boinc     15847 Nov 21 17:48 start_atlas.sh
[2025-11-22 10:53:47] -rw-r--r-- 2 boinc boinc    590101 Nov 21 17:48 input.tar.gz
[2025-11-22 10:53:47] -rw------- 1 boinc boinc 908638458 Nov 22 10:49 HITS.pool.root.1
[2025-11-22 10:53:47] -rw------- 1 boinc boinc  10045440 Nov 22 10:50 result.tar.gz
10:53:49 (1090411): run_atlas exited; CPU time 232908.880808
10:53:49 (1090411): called boinc_finish(0)

</stderr_txt>
]]>

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