Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:59:59 (1242204): wrapper (7.7.26015): starting
15:59:59 (1242204): wrapper: running run_atlas (--nthreads 4)
[2025-11-23 15:59:59] Arguments: --nthreads 4
[2025-11-23 15:59:59] Threads: 4
[2025-11-23 15:59:59] Checking for CVMFS
[2025-11-23 15:59:59] No cvmfs_config command found, will try listing directly
[2025-11-23 15:59:59] CVMFS is ok
[2025-11-23 15:59:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 15:59:59] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 15:59:59] Further information can be found at the LHC@home message board.
[2025-11-23 15:59:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 15:59:59] Checking for apptainer binary...
[2025-11-23 15:59:59] which: no apptainer in ((null))
[2025-11-23 15:59:59] apptainer is not installed, using version from CVMFS
[2025-11-23 15:59:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 15:59:59] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot128/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2025-11-23 15:59:59] apptainer works
[2025-11-23 15:59:59] Set ATHENA_PROC_NUMBER=4
[2025-11-23 15:59:59] Set ATHENA_CORE_NUMBER=4
[2025-11-23 15:59:59] Starting ATLAS job with PandaID=6893856383
[2025-11-23 15:59:59] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot128/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 07:37:37]  *** The last 200 lines of the pilot log: ***
[2025-11-24 07:37:37] 2025-11-24 06:14:02,407 | INFO     | PID=1246788 has CPU usage=26.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-24 07:37:37] 2025-11-24 06:14:02,407 | INFO     | .. there are 11 such processes running
[2025-11-24 07:37:37] 2025-11-24 06:14:02,893 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 07:37:37] 2025-11-24 06:14:02,914 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2685.75946875
[2025-11-24 07:37:37] 2025-11-24 06:14:02,939 | INFO     | using path: /scratch/boinc/var/slot128/slots/0/PanDA_Pilot-6893856383/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 07:37:37] 2025-11-24 06:14:02,939 | INFO     | extracted standard info from prmon json
[2025-11-24 07:37:37] 2025-11-24 06:14:02,940 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 07:37:37] 2025-11-24 06:14:02,940 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 07:37:37] 2025-11-24 06:14:02,955 | INFO     | fitting pss+swap vs Time
[2025-11-24 07:37:37] 2025-11-24 06:14:02,956 | INFO     | sum of square deviations: 224546422942.33975
[2025-11-24 07:37:37] 2025-11-24 06:14:02,975 | INFO     | sum of deviations: 704517977709.7179
[2025-11-24 07:37:37] 2025-11-24 06:14:02,975 | INFO     | mean x: 1763937410.5133631
[2025-11-24 07:37:37] 2025-11-24 06:14:02,976 | INFO     | mean y: 2265314.1069042315
[2025-11-24 07:37:37] 2025-11-24 06:14:02,976 | INFO     | intersect: -5532116400.717851
[2025-11-24 07:37:37] 2025-11-24 06:14:02,977 | INFO     | chi2: 4.12987185667007
[2025-11-24 07:37:37] 2025-11-24 06:14:02,978 | INFO     | sum of square deviations: 220816486899.83893
[2025-11-24 07:37:37] 2025-11-24 06:14:02,996 | INFO     | sum of deviations: 867065598263.654
[2025-11-24 07:37:37] 2025-11-24 06:14:02,996 | INFO     | mean x: 1763937258.0134377
[2025-11-24 07:37:37] 2025-11-24 06:14:02,996 | INFO     | mean y: 2271952.6954087345
[2025-11-24 07:37:37] 2025-11-24 06:14:02,996 | INFO     | intersect: -6924064641.966204
[2025-11-24 07:37:37] 2025-11-24 06:14:02,997 | INFO     | chi2: 2.3490648691456912
[2025-11-24 07:37:37] 2025-11-24 06:14:02,997 | INFO     | current chi2=2.3490648691456912 (change=43.120151165180445 %)
[2025-11-24 07:37:37] 2025-11-24 06:14:02,998 | INFO     | sum of square deviations: 217128086519.83817
[2025-11-24 07:37:37] 2025-11-24 06:14:03,015 | INFO     | sum of deviations: 878943027583.2966
[2025-11-24 07:37:37] 2025-11-24 06:14:03,015 | INFO     | mean x: 1763937105.5135136
[2025-11-24 07:37:37] 2025-11-24 06:14:03,015 | INFO     | mean y: 2272440.391891892
[2025-11-24 07:37:37] 2025-11-24 06:14:03,016 | INFO     | intersect: -7138214287.219511
[2025-11-24 07:37:37] 2025-11-24 06:14:03,016 | INFO     | chi2: 2.273384746475631
[2025-11-24 07:37:37] 2025-11-24 06:14:03,017 | INFO     | current chi2=2.273384746475631 (change=3.221712761707745 %)
[2025-11-24 07:37:37] 2025-11-24 06:14:03,017 | INFO     | right removable region: 887
[2025-11-24 07:37:37] 2025-11-24 06:14:03,018 | INFO     | sum of square deviations: 220816479579.83887
[2025-11-24 07:37:37] 2025-11-24 06:14:03,036 | INFO     | sum of deviations: 524401307518.84265
[2025-11-24 07:37:37] 2025-11-24 06:14:03,036 | INFO     | mean x: 1763937563.0134377
[2025-11-24 07:37:37] 2025-11-24 06:14:03,036 | INFO     | mean y: 2272665.679731243
[2025-11-24 07:37:37] 2025-11-24 06:14:03,037 | INFO     | intersect: -4186776839.076089
[2025-11-24 07:37:37] 2025-11-24 06:14:03,038 | INFO     | chi2: 1.9862963545799197
[2025-11-24 07:37:37] 2025-11-24 06:14:03,038 | INFO     | current chi2=1.9862963545799197 (change=51.90416498342694 %)
[2025-11-24 07:37:37] 2025-11-24 06:14:03,039 | INFO     | sum of square deviations: 217128071879.8382
[2025-11-24 07:37:37] 2025-11-24 06:14:03,057 | INFO     | sum of deviations: 495817089625.1348
[2025-11-24 07:37:37] 2025-11-24 06:14:03,057 | INFO     | mean x: 1763937715.5135136
[2025-11-24 07:37:37] 2025-11-24 06:14:03,057 | INFO     | mean y: 2273847.363738739
[2025-11-24 07:37:37] 2025-11-24 06:14:03,057 | INFO     | intersect: -4025719662.705887
[2025-11-24 07:37:37] 2025-11-24 06:14:03,058 | INFO     | chi2: 1.9666262844344682
[2025-11-24 07:37:37] 2025-11-24 06:14:03,058 | INFO     | current chi2=1.9666262844344682 (change=0.9902887904968004 %)
[2025-11-24 07:37:37] 2025-11-24 06:14:03,058 | INFO     | left removable region: 20
[2025-11-24 07:37:37] 2025-11-24 06:14:03,059 | INFO     | sum of square deviations: 202085096607.83383
[2025-11-24 07:37:37] 2025-11-24 06:14:03,076 | INFO     | sum of deviations: 619168201885.3461
[2025-11-24 07:37:37] 2025-11-24 06:14:03,076 | INFO     | mean x: 1763937685.013841
[2025-11-24 07:37:37] 2025-11-24 06:14:03,076 | INFO     | mean y: 2283242.3044982697
[2025-11-24 07:37:37] 2025-11-24 06:14:03,077 | INFO     | intersect: -5402242588.6492405
[2025-11-24 07:37:37] 2025-11-24 06:14:03,077 | INFO     | chi2: 0.07752585743422873
[2025-11-24 07:37:37] 2025-11-24 06:14:03,078 | INFO     | current memory leak: 3.06 B/s (using 867 data points, chi2=0.08)
[2025-11-24 07:37:37] 2025-11-24 06:14:03,078 | INFO     | could have reported an average CPU frequency of 2685 MHz (34 samples)
[2025-11-24 07:37:37] 2025-11-24 06:14:03,078 | INFO     | ..............................
[2025-11-24 07:37:37] 2025-11-24 06:14:03,079 | INFO     | . Timing measurements:
[2025-11-24 07:37:37] 2025-11-24 06:14:03,079 | INFO     | . get job = 0 s
[2025-11-24 07:37:37] 2025-11-24 06:14:03,079 | INFO     | . initial setup = 1 s
[2025-11-24 07:37:37] 2025-11-24 06:14:03,079 | INFO     | . payload setup = 10 s
[2025-11-24 07:37:37] 2025-11-24 06:14:03,079 | INFO     | . stage-in = 0 s
[2025-11-24 07:37:37] 2025-11-24 06:14:03,079 | INFO     | . payload execution = 54784 s
[2025-11-24 07:37:37] 2025-11-24 06:14:03,079 | INFO     | . stage-out = 2 s
[2025-11-24 07:37:37] 2025-11-24 06:14:03,079 | INFO     | . log creation = 0 s
[2025-11-24 07:37:37] 2025-11-24 06:14:03,079 | INFO     | ..............................
[2025-11-24 07:37:37] 2025-11-24 06:14:03,179 | INFO     | 
[2025-11-24 07:37:37] 2025-11-24 06:14:03,179 | INFO     | job summary report
[2025-11-24 07:37:37] 2025-11-24 06:14:03,179 | INFO     | --------------------------------------------------
[2025-11-24 07:37:37] 2025-11-24 06:14:03,179 | INFO     | PanDA job id: 6893856383
[2025-11-24 07:37:37] 2025-11-24 06:14:03,180 | INFO     | task id: 47523449
[2025-11-24 07:37:37] 2025-11-24 06:14:03,180 | INFO     | errors: (none)
[2025-11-24 07:37:37] 2025-11-24 06:14:03,180 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 07:37:37] 2025-11-24 06:14:03,180 | INFO     | pilot state: finished 
[2025-11-24 07:37:37] 2025-11-24 06:14:03,180 | INFO     | transexitcode: 0
[2025-11-24 07:37:37] 2025-11-24 06:14:03,180 | INFO     | exeerrorcode: 0
[2025-11-24 07:37:37] 2025-11-24 06:14:03,180 | INFO     | exeerrordiag: 
[2025-11-24 07:37:37] 2025-11-24 06:14:03,180 | INFO     | exitcode: 0
[2025-11-24 07:37:37] 2025-11-24 06:14:03,180 | INFO     | exitmsg: OK
[2025-11-24 07:37:37] 2025-11-24 06:14:03,180 | INFO     | cpuconsumptiontime: 216205 s
[2025-11-24 07:37:37] 2025-11-24 06:14:03,180 | INFO     | nevents: 1000
[2025-11-24 07:37:37] 2025-11-24 06:14:03,180 | INFO     | neventsw: 0
[2025-11-24 07:37:37] 2025-11-24 06:14:03,180 | INFO     | pid: 1254760
[2025-11-24 07:37:37] 2025-11-24 06:14:03,181 | INFO     | pgrp: 1254760
[2025-11-24 07:37:37] 2025-11-24 06:14:03,181 | INFO     | corecount: 4
[2025-11-24 07:37:37] 2025-11-24 06:14:03,181 | INFO     | event service: False
[2025-11-24 07:37:37] 2025-11-24 06:14:03,181 | INFO     | sizes: {0: 2298819, 7: 2299081, 11: 2299109, 54798: 2351621, 54801: 2360639, 54803: 2360695, 54810: 2361069}
[2025-11-24 07:37:37] 2025-11-24 06:14:03,181 | INFO     | --------------------------------------------------
[2025-11-24 07:37:37] 2025-11-24 06:14:03,181 | INFO     | 
[2025-11-24 07:37:37] 2025-11-24 06:14:03,181 | INFO     | executing command: ls -lF /scratch/boinc/var/slot128/slots/0
[2025-11-24 07:37:37] 2025-11-24 06:14:03,212 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 07:37:37] 2025-11-24 06:14:03,212 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 07:37:37] 2025-11-24 06:14:03,212 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 07:37:37] 2025-11-24 06:14:03,213 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 07:37:37] 2025-11-24 06:14:03,213 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 07:37:37] 2025-11-24 06:14:03,213 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 07:37:37] 2025-11-24 06:14:03,213 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 07:37:37] 2025-11-24 06:14:03,213 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 07:37:37] 2025-11-24 06:14:03,213 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 07:37:37] 2025-11-24 06:14:03,213 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 07:37:37] 2025-11-24 06:14:03,213 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 07:37:37] 2025-11-24 06:14:03,213 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 07:37:37] 2025-11-24 06:14:03,213 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 07:37:37] 2025-11-24 06:14:03,214 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 07:37:37] 2025-11-24 06:14:03,214 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 07:37:37] 2025-11-24 06:14:03,214 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 07:37:37] 2025-11-24 06:14:03,214 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 07:37:37] 2025-11-24 06:14:03,214 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 07:37:37] 2025-11-24 06:14:03,214 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 07:37:37] 2025-11-24 06:14:03,214 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 07:37:37] 2025-11-24 06:14:03,214 | INFO     | job 6893856383 has completed (purged errors)
[2025-11-24 07:37:37] 2025-11-24 06:14:03,214 | INFO     | overall cleanup function is called
[2025-11-24 07:37:37] 2025-11-24 06:14:04,232 | INFO     | --- collectZombieJob: --- 10, [1254760]
[2025-11-24 07:37:37] 2025-11-24 06:14:04,232 | INFO     | zombie collector waiting for pid 1254760
[2025-11-24 07:37:37] 2025-11-24 06:14:04,232 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 07:37:37] 2025-11-24 06:14:04,232 | INFO     | collected zombie processes
[2025-11-24 07:37:37] 2025-11-24 06:14:04,232 | INFO     | will attempt to kill all subprocesses of pid=1254760
[2025-11-24 07:37:37] 2025-11-24 06:14:05,011 | INFO     | process IDs to be killed: [1254760] (in reverse order)
[2025-11-24 07:37:37] 2025-11-24 06:14:05,287 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 07:37:37] 2025-11-24 06:14:05,288 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 07:37:37] 2025-11-24 06:14:05,321 | INFO     | did not find any defunct processes belonging to 1254760
[2025-11-24 07:37:37] 2025-11-24 06:14:05,351 | INFO     | did not find any defunct processes belonging to 1254760
[2025-11-24 07:37:37] 2025-11-24 06:14:05,353 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 07:37:37] 2025-11-24 06:14:05,353 | INFO     | ready for new job
[2025-11-24 07:37:37] 2025-11-24 06:14:05,353 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 07:37:37] 2025-11-24 06:14:05,360 | INFO     | ***************************************
[2025-11-24 07:37:37] 2025-11-24 06:14:05,360 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 07:37:37] 2025-11-24 06:14:05,360 | INFO     | ***************************************
[2025-11-24 07:37:37] 2025-11-24 06:14:05,360 | INFO     | 
[2025-11-24 07:37:37] 2025-11-24 06:14:05,369 | INFO     | architecture information:
[2025-11-24 07:37:37] 2025-11-24 06:14:05,369 | INFO     | executing command: cat /etc/os-release
[2025-11-24 07:37:37] 2025-11-24 06:14:05,396 | INFO     | cat /etc/os-release:
[2025-11-24 07:37:37] NAME="CentOS Linux"
[2025-11-24 07:37:37] VERSION="7 (Core)"
[2025-11-24 07:37:37] ID="centos"
[2025-11-24 07:37:37] ID_LIKE="rhel fedora"
[2025-11-24 07:37:37] VERSION_ID="7"
[2025-11-24 07:37:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 07:37:37] ANSI_COLOR="0;31"
[2025-11-24 07:37:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 07:37:37] HOME_URL="https://www.centos.org/"
[2025-11-24 07:37:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 07:37:37] 
[2025-11-24 07:37:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 07:37:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 07:37:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 07:37:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 07:37:37] 
[2025-11-24 07:37:37] 2025-11-24 06:14:05,397 | INFO     | ***************************************
[2025-11-24 07:37:37] 2025-11-24 06:14:05,899 | INFO     | executing command: df -mP /scratch/boinc/var/slot128/slots/0
[2025-11-24 07:37:37] 2025-11-24 06:14:05,927 | INFO     | sufficient remaining disk space (3320689197056 B)
[2025-11-24 07:37:37] 2025-11-24 06:14:05,927 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 07:37:37] 2025-11-24 06:14:05,927 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 07:37:37] 2025-11-24 06:14:05,928 | INFO     | update_server=False
[2025-11-24 07:37:37] 2025-11-24 06:14:05,928 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 07:37:37] 2025-11-24 06:14:05,928 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 07:37:37] 2025-11-24 06:14:05,928 | INFO     | aborting loop
[2025-11-24 07:37:37] 2025-11-24 06:14:06,196 | INFO     | all payload control threads have been joined
[2025-11-24 07:37:37] 2025-11-24 06:14:06,477 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 07:37:37] 2025-11-24 06:14:06,770 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 07:37:37] 2025-11-24 06:14:06,929 | INFO     | [job] retrieve thread has finished
[2025-11-24 07:37:37] 2025-11-24 06:14:06,933 | INFO     | [job] job monitor thread has finished
[2025-11-24 07:37:37] 2025-11-24 06:14:06,967 | INFO     | all data control threads have been joined
[2025-11-24 07:37:37] 2025-11-24 06:14:07,030 | INFO     | [payload] failed_post thread has finished
[2025-11-24 07:37:37] 2025-11-24 06:14:07,099 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 07:37:37] 2025-11-24 06:14:07,149 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 07:37:37] 2025-11-24 06:14:07,201 | INFO     | [payload] control thread has finished
[2025-11-24 07:37:37] 2025-11-24 06:14:07,288 | INFO     | all job control threads have been joined
[2025-11-24 07:37:37] 2025-11-24 06:14:07,349 | INFO     | [job] validate thread has finished
[2025-11-24 07:37:37] 2025-11-24 06:14:07,603 | INFO     | [data] copytool_in thread has finished
[2025-11-24 07:37:37] 2025-11-24 06:14:07,802 | INFO     | [payload] validate_post thread has finished
[2025-11-24 07:37:37] 2025-11-24 06:14:07,973 | INFO     | [data] control thread has finished
[2025-11-24 07:37:37] 2025-11-24 06:14:08,107 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 07:37:37] 2025-11-24 06:14:08,188 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 07:37:37] 2025-11-24 06:14:08,293 | INFO     | [job] control thread has finished
[2025-11-24 07:37:37] 2025-11-24 06:14:08,484 | INFO     | [data] copytool_out thread has finished
[2025-11-24 07:37:37] 2025-11-24 06:14:09,193 | INFO     | [job] queue monitor thread has finished
[2025-11-24 07:37:37] 2025-11-24 06:14:10,776 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 07:37:37] 2025-11-24 06:14:16,757 | INFO     | job.realtimelogging is not enabled
[2025-11-24 07:37:37] 2025-11-24 06:14:17,762 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 07:37:37] 2025-11-24 06:14:35,445 | INFO     | PID=1246788 has CPU usage=6.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 07:37:37] 2025-11-24 06:14:35,445 | INFO     | .. there are 11 such processes running
[2025-11-24 07:37:37] 2025-11-24 06:14:35,446 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 07:37:37] 2025-11-24 06:14:35,446 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 07:37:37] 2025-11-24 06:14:35,446 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 07:37:37] 2025-11-24 06:14:43,417 | INFO     | [monitor] cgroup control has ended
[2025-11-24 07:37:37] 2025-11-24 06:14:44,764 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22673852614464)>', '<ExcThread(monitor, started 22673608365824)>']
[2025-11-24 07:37:37] 2025-11-24 06:14:45,482 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 07:37:37] 2025-11-24 06:14:45,482 | INFO     | [monitor] control thread has ended
[2025-11-24 07:37:37] 2025-11-24 06:14:49,789 | INFO     | all workflow threads have been joined
[2025-11-24 07:37:37] 2025-11-24 06:14:49,790 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 07:37:37] 2025-11-24 06:14:49,790 | INFO     | traces error code: 0
[2025-11-24 07:37:37] 2025-11-24 06:14:49,790 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 07:37:37] 2025-11-24 06:14:49,999 [wrapper] ==== pilot stdout END ====
[2025-11-24 07:37:37] 2025-11-24 06:14:50,003 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 07:37:37] 2025-11-24 06:14:50,006 [wrapper] pilotpid: 1246788
[2025-11-24 07:37:37] 2025-11-24 06:14:50,009 [wrapper] Pilot exit status: 0
[2025-11-24 07:37:37] 2025-11-24 06:14:50,025 [wrapper] pandaids: 6893856383
[2025-11-24 07:37:37] 2025-11-24 06:14:50,196 [wrapper] cleanup supervisor_pilot 2790833 1246789
[2025-11-24 07:37:37] 2025-11-24 06:14:50,201 [wrapper] Test setup, not cleaning
[2025-11-24 07:37:37] 2025-11-24 06:14:50,204 [wrapper] apfmon messages muted
[2025-11-24 07:37:37] 2025-11-24 06:14:50,207 [wrapper] ==== wrapper stdout END ====
[2025-11-24 07:37:37] 2025-11-24 06:14:50,211 [wrapper] ==== wrapper stderr END ====
[2025-11-24 07:37:37]  *** Error codes and diagnostics ***
[2025-11-24 07:37:37]     "exeErrorCode": 0,
[2025-11-24 07:37:37]     "exeErrorDiag": "",
[2025-11-24 07:37:37]     "pilotErrorCode": 0,
[2025-11-24 07:37:37]     "pilotErrorDiag": "",
[2025-11-24 07:37:37]  *** Listing of results directory ***
[2025-11-24 07:37:37] total 1299812
[2025-11-24 07:37:37] -rw-r--r-- 1 boinc boinc    576529 Nov 20 13:07 pilot3.tar.gz
[2025-11-24 07:37:37] -rwx------ 1 boinc boinc     36292 Nov 20 13:47 runpilot2-wrapper.sh
[2025-11-24 07:37:37] -rw-r--r-- 1 boinc boinc      5112 Nov 20 13:47 queuedata.json
[2025-11-24 07:37:37] -rw-r--r-- 1 boinc boinc       100 Nov 23 15:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 07:37:37] -rwxr-xr-x 1 boinc boinc      7986 Nov 23 15:59 run_atlas
[2025-11-24 07:37:37] -rw-r--r-- 1 boinc boinc       105 Nov 23 15:59 job.xml
[2025-11-24 07:37:37] -rw-r--r-- 1 boinc boinc      6688 Nov 23 15:59 init_data.xml
[2025-11-24 07:37:37] -rw-r--r-- 2 boinc boinc 411204719 Nov 23 15:59 EVNT.47493127._000463.pool.root.1
[2025-11-24 07:37:37] -rw-r--r-- 2 boinc boinc     15847 Nov 23 15:59 start_atlas.sh
[2025-11-24 07:37:37] drwxrwx--x 2 boinc boinc      4096 Nov 23 15:59 shared
[2025-11-24 07:37:37] -rw-r--r-- 2 boinc boinc    590096 Nov 23 15:59 input.tar.gz
[2025-11-24 07:37:37] -rw-r--r-- 1 boinc boinc         0 Nov 23 15:59 boinc_lockfile
[2025-11-24 07:37:37] -rw-r--r-- 1 boinc boinc      2786 Nov 23 15:59 pandaJob.out
[2025-11-24 07:37:37] -rw------- 1 boinc boinc    989785 Nov 23 16:00 agis_schedconf.cvmfs.json
[2025-11-24 07:37:37] drwx------ 5 boinc boinc      4096 Nov 23 16:00 pilot3
[2025-11-24 07:37:37] -rw-r--r-- 1 boinc boinc       532 Nov 24 07:06 boinc_task_state.xml
[2025-11-24 07:37:37] -rw------- 1 boinc boinc 897445068 Nov 24 07:13 HITS.47523449._004627.pool.root.1
[2025-11-24 07:37:37] -rw------- 1 boinc boinc      1038 Nov 24 07:13 memory_monitor_summary.json
[2025-11-24 07:37:37] -rw------- 1 boinc boinc   1526164 Nov 24 07:13 agis_ddmendpoints.agis.ALL.json
[2025-11-24 07:37:37] -rw------- 1 boinc boinc   1655949 Nov 24 07:13 log.47523449._004627.job.log.tgz.1
[2025-11-24 07:37:37] -rw------- 1 boinc boinc        95 Nov 24 07:13 pilot_heartbeat.json
[2025-11-24 07:37:37] -rw------- 1 boinc boinc      8595 Nov 24 07:14 heartbeat.json
[2025-11-24 07:37:37] -rw------- 1 boinc boinc      4908 Nov 24 07:14 pilotlog.txt
[2025-11-24 07:37:37] -rw------- 1 boinc boinc   7563087 Nov 24 07:14 log.47523449._004627.job.log.1
[2025-11-24 07:37:37] -rw------- 1 boinc boinc       353 Nov 24 07:14 output.list
[2025-11-24 07:37:37] -rw-r--r-- 1 boinc boinc       620 Nov 24 07:14 runtime_log
[2025-11-24 07:37:37] -rw------- 1 boinc boinc   9236480 Nov 24 07:14 result.tar.gz
[2025-11-24 07:37:37] -rw-r--r-- 1 boinc boinc      9223 Nov 24 07:14 runtime_log.err
[2025-11-24 07:37:37] -rw------- 1 boinc boinc       670 Nov 24 07:14 jyrLDmTFJg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmFeGKDmMvhxmn.diag
[2025-11-24 07:37:37] -rw-r--r-- 1 boinc boinc        28 Nov 24 07:37 wrapper_checkpoint.txt
[2025-11-24 07:37:37] -rw-r--r-- 1 boinc boinc      8192 Nov 24 07:37 boinc_mmap_file
[2025-11-24 07:37:37] -rw-r--r-- 1 boinc boinc     21151 Nov 24 07:37 stderr.txt
[2025-11-24 07:37:37] HITS file was successfully produced:
[2025-11-24 07:37:37] -rw------- 1 boinc boinc 897445068 Nov 24 07:13 shared/HITS.pool.root.1
[2025-11-24 07:37:37]  *** Contents of shared directory: ***
[2025-11-24 07:37:37] total 1287604
[2025-11-24 07:37:37] -rw-r--r-- 2 boinc boinc 411204719 Nov 23 15:59 ATLAS.root_0
[2025-11-24 07:37:37] -rw-r--r-- 2 boinc boinc     15847 Nov 23 15:59 start_atlas.sh
[2025-11-24 07:37:37] -rw-r--r-- 2 boinc boinc    590096 Nov 23 15:59 input.tar.gz
[2025-11-24 07:37:37] -rw------- 1 boinc boinc 897445068 Nov 24 07:13 HITS.pool.root.1
[2025-11-24 07:37:37] -rw------- 1 boinc boinc   9236480 Nov 24 07:14 result.tar.gz
07:37:38 (1242204): run_atlas exited; CPU time 219024.438848
07:37:38 (1242204): called boinc_finish(0)

</stderr_txt>
]]>

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