Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:33:54 (1182337): wrapper (7.7.26015): starting
15:33:54 (1182337): wrapper: running run_atlas (--nthreads 4)
[2025-11-23 15:33:54] Arguments: --nthreads 4
[2025-11-23 15:33:54] Threads: 4
[2025-11-23 15:33:54] Checking for CVMFS
[2025-11-23 15:33:54] No cvmfs_config command found, will try listing directly
[2025-11-23 15:33:54] CVMFS is ok
[2025-11-23 15:33:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-23 15:33:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-23 15:33:54] Further information can be found at the LHC@home message board.
[2025-11-23 15:33:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-23 15:33:54] Checking for apptainer binary...
[2025-11-23 15:33:54] which: no apptainer in ((null))
[2025-11-23 15:33:54] apptainer is not installed, using version from CVMFS
[2025-11-23 15:33:54] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-23 15:33:55] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot108/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2025-11-23 15:33:55] apptainer works
[2025-11-23 15:33:55] Set ATHENA_PROC_NUMBER=4
[2025-11-23 15:33:55] Set ATHENA_CORE_NUMBER=4
[2025-11-23 15:33:55] Starting ATLAS job with PandaID=6893857044
[2025-11-23 15:33:55] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot108/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-24 07:37:37]  *** The last 200 lines of the pilot log: ***
[2025-11-24 07:37:37] 2025-11-24 06:29:25,774 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-24 07:37:37] 2025-11-24 06:29:27,478 | INFO     | PID=1186607 has CPU usage=21.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i 
[2025-11-24 07:37:37] 2025-11-24 06:29:27,478 | INFO     | .. there are 10 such processes running
[2025-11-24 07:37:37] 2025-11-24 06:29:27,866 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-24 07:37:37] 2025-11-24 06:29:27,884 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2670.0441093750005
[2025-11-24 07:37:37] 2025-11-24 06:29:27,908 | INFO     | using path: /scratch/boinc/var/slot108/slots/0/PanDA_Pilot-6893857044/memory_monitor_summary.json (trf name=prmon)
[2025-11-24 07:37:37] 2025-11-24 06:29:27,908 | INFO     | extracted standard info from prmon json
[2025-11-24 07:37:37] 2025-11-24 06:29:27,909 | INFO     | extracted standard memory fields from prmon json
[2025-11-24 07:37:37] 2025-11-24 06:29:27,909 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-24 07:37:37] 2025-11-24 06:29:27,924 | INFO     | fitting pss+swap vs Time
[2025-11-24 07:37:37] 2025-11-24 06:29:27,925 | INFO     | sum of square deviations: 255908468425.93613
[2025-11-24 07:37:37] 2025-11-24 06:29:27,946 | INFO     | sum of deviations: 711266154934.2949
[2025-11-24 07:37:37] 2025-11-24 06:29:27,946 | INFO     | mean x: 1763937139.5245202
[2025-11-24 07:37:37] 2025-11-24 06:29:27,946 | INFO     | mean y: 2267435.487206823
[2025-11-24 07:37:37] 2025-11-24 06:29:27,946 | INFO     | intersect: -4900379180.673967
[2025-11-24 07:37:37] 2025-11-24 06:29:27,947 | INFO     | chi2: 4.536116436177101
[2025-11-24 07:37:37] 2025-11-24 06:29:27,948 | INFO     | sum of square deviations: 251837878188.433
[2025-11-24 07:37:37] 2025-11-24 06:29:27,968 | INFO     | sum of deviations: 911127394717.1895
[2025-11-24 07:37:37] 2025-11-24 06:29:27,968 | INFO     | mean x: 1763936987.0246518
[2025-11-24 07:37:37] 2025-11-24 06:29:27,968 | INFO     | mean y: 2274916.122186495
[2025-11-24 07:37:37] 2025-11-24 06:29:27,968 | INFO     | intersect: -6379494669.112819
[2025-11-24 07:37:37] 2025-11-24 06:29:27,969 | INFO     | chi2: 2.28282064677507
[2025-11-24 07:37:37] 2025-11-24 06:29:27,969 | INFO     | current chi2=2.28282064677507 (change=49.674557986016765 %)
[2025-11-24 07:37:37] 2025-11-24 06:29:27,971 | INFO     | sum of square deviations: 247810684113.42987
[2025-11-24 07:37:37] 2025-11-24 06:29:27,990 | INFO     | sum of deviations: 925342320408.9319
[2025-11-24 07:37:37] 2025-11-24 06:29:27,991 | INFO     | mean x: 1763936834.5247846
[2025-11-24 07:37:37] 2025-11-24 06:29:27,991 | INFO     | mean y: 2275451.285560345
[2025-11-24 07:37:37] 2025-11-24 06:29:27,991 | INFO     | intersect: -6584387304.412357
[2025-11-24 07:37:37] 2025-11-24 06:29:27,992 | INFO     | chi2: 2.2092286443092743
[2025-11-24 07:37:37] 2025-11-24 06:29:27,992 | INFO     | current chi2=2.2092286443092743 (change=3.223731245367819 %)
[2025-11-24 07:37:37] 2025-11-24 06:29:27,992 | INFO     | right removable region: 927
[2025-11-24 07:37:37] 2025-11-24 06:29:27,993 | INFO     | sum of square deviations: 251837921131.48132
[2025-11-24 07:37:37] 2025-11-24 06:29:28,013 | INFO     | sum of deviations: 527675798126.979
[2025-11-24 07:37:37] 2025-11-24 06:29:28,014 | INFO     | mean x: 1763937292.0235798
[2025-11-24 07:37:37] 2025-11-24 06:29:28,014 | INFO     | mean y: 2274301.4555198285
[2025-11-24 07:37:37] 2025-11-24 06:29:28,014 | INFO     | intersect: -3693702119.5400014
[2025-11-24 07:37:37] 2025-11-24 06:29:28,015 | INFO     | chi2: 2.4327742998903252
[2025-11-24 07:37:37] 2025-11-24 06:29:28,015 | INFO     | current chi2=2.4327742998903252 (change=46.36878629287144 %)
[2025-11-24 07:37:37] 2025-11-24 06:29:28,016 | INFO     | sum of square deviations: 247810884067.61096
[2025-11-24 07:37:37] 2025-11-24 06:29:28,036 | INFO     | sum of deviations: 513881099080.3736
[2025-11-24 07:37:37] 2025-11-24 06:29:28,036 | INFO     | mean x: 1763937444.5204742
[2025-11-24 07:37:37] 2025-11-24 06:29:28,037 | INFO     | mean y: 2274823.2435344825
[2025-11-24 07:37:37] 2025-11-24 06:29:28,037 | INFO     | intersect: -3655571425.559227
[2025-11-24 07:37:37] 2025-11-24 06:29:28,038 | INFO     | chi2: 2.4307790761851154
[2025-11-24 07:37:37] 2025-11-24 06:29:28,038 | INFO     | current chi2=2.4307790761851154 (change=0.08201433668959056 %)
[2025-11-24 07:37:37] 2025-11-24 06:29:28,038 | INFO     | left removable region: 20
[2025-11-24 07:37:37] 2025-11-24 06:29:28,039 | INFO     | sum of square deviations: 231365557647.78384
[2025-11-24 07:37:37] 2025-11-24 06:29:28,062 | INFO     | sum of deviations: 713899381926.848
[2025-11-24 07:37:37] 2025-11-24 06:29:28,062 | INFO     | mean x: 1763937414.0154355
[2025-11-24 07:37:37] 2025-11-24 06:29:28,062 | INFO     | mean y: 2283361.296582139
[2025-11-24 07:37:37] 2025-11-24 06:29:28,062 | INFO     | intersect: -5440505282.0342455
[2025-11-24 07:37:37] 2025-11-24 06:29:28,063 | INFO     | chi2: 0.08342399693677147
[2025-11-24 07:37:37] 2025-11-24 06:29:28,063 | INFO     | current memory leak: 3.09 B/s (using 907 data points, chi2=0.08)
[2025-11-24 07:37:37] 2025-11-24 06:29:28,064 | INFO     | could have reported an average CPU frequency of 2681 MHz (35 samples)
[2025-11-24 07:37:37] 2025-11-24 06:29:28,064 | INFO     | ..............................
[2025-11-24 07:37:37] 2025-11-24 06:29:28,064 | INFO     | . Timing measurements:
[2025-11-24 07:37:37] 2025-11-24 06:29:28,064 | INFO     | . get job = 0 s
[2025-11-24 07:37:37] 2025-11-24 06:29:28,064 | INFO     | . initial setup = 2 s
[2025-11-24 07:37:37] 2025-11-24 06:29:28,064 | INFO     | . payload setup = 28 s
[2025-11-24 07:37:37] 2025-11-24 06:29:28,064 | INFO     | . stage-in = 0 s
[2025-11-24 07:37:37] 2025-11-24 06:29:28,065 | INFO     | . payload execution = 57212 s
[2025-11-24 07:37:37] 2025-11-24 06:29:28,065 | INFO     | . stage-out = 2 s
[2025-11-24 07:37:37] 2025-11-24 06:29:28,065 | INFO     | . log creation = 0 s
[2025-11-24 07:37:37] 2025-11-24 06:29:28,065 | INFO     | ..............................
[2025-11-24 07:37:37] 2025-11-24 06:29:28,160 | INFO     | 
[2025-11-24 07:37:37] 2025-11-24 06:29:28,160 | INFO     | job summary report
[2025-11-24 07:37:37] 2025-11-24 06:29:28,160 | INFO     | --------------------------------------------------
[2025-11-24 07:37:37] 2025-11-24 06:29:28,160 | INFO     | PanDA job id: 6893857044
[2025-11-24 07:37:37] 2025-11-24 06:29:28,160 | INFO     | task id: 47523449
[2025-11-24 07:37:37] 2025-11-24 06:29:28,161 | INFO     | errors: (none)
[2025-11-24 07:37:37] 2025-11-24 06:29:28,161 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-24 07:37:37] 2025-11-24 06:29:28,161 | INFO     | pilot state: finished 
[2025-11-24 07:37:37] 2025-11-24 06:29:28,161 | INFO     | transexitcode: 0
[2025-11-24 07:37:37] 2025-11-24 06:29:28,161 | INFO     | exeerrorcode: 0
[2025-11-24 07:37:37] 2025-11-24 06:29:28,161 | INFO     | exeerrordiag: 
[2025-11-24 07:37:37] 2025-11-24 06:29:28,161 | INFO     | exitcode: 0
[2025-11-24 07:37:37] 2025-11-24 06:29:28,161 | INFO     | exitmsg: OK
[2025-11-24 07:37:37] 2025-11-24 06:29:28,161 | INFO     | cpuconsumptiontime: 225422 s
[2025-11-24 07:37:37] 2025-11-24 06:29:28,161 | INFO     | nevents: 1000
[2025-11-24 07:37:37] 2025-11-24 06:29:28,161 | INFO     | neventsw: 0
[2025-11-24 07:37:37] 2025-11-24 06:29:28,161 | INFO     | pid: 1197274
[2025-11-24 07:37:37] 2025-11-24 06:29:28,162 | INFO     | pgrp: 1197274
[2025-11-24 07:37:37] 2025-11-24 06:29:28,162 | INFO     | corecount: 4
[2025-11-24 07:37:37] 2025-11-24 06:29:28,162 | INFO     | event service: False
[2025-11-24 07:37:37] 2025-11-24 06:29:28,162 | INFO     | sizes: {0: 2297973, 1: 2298841, 2: 2298841, 12: 2298869, 15: 2299159, 23: 2299187, 57244: 2353572, 57248: 2362590, 57251: 2362646, 57259: 2362892}
[2025-11-24 07:37:37] 2025-11-24 06:29:28,162 | INFO     | --------------------------------------------------
[2025-11-24 07:37:37] 2025-11-24 06:29:28,162 | INFO     | 
[2025-11-24 07:37:37] 2025-11-24 06:29:28,162 | INFO     | executing command: ls -lF /scratch/boinc/var/slot108/slots/0
[2025-11-24 07:37:37] 2025-11-24 06:29:28,188 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-24 07:37:37] 2025-11-24 06:29:28,189 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-24 07:37:37] 2025-11-24 06:29:28,189 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-24 07:37:37] 2025-11-24 06:29:28,189 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-24 07:37:37] 2025-11-24 06:29:28,189 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-24 07:37:37] 2025-11-24 06:29:28,189 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-24 07:37:37] 2025-11-24 06:29:28,189 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-24 07:37:37] 2025-11-24 06:29:28,189 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-24 07:37:37] 2025-11-24 06:29:28,189 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-24 07:37:37] 2025-11-24 06:29:28,190 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-24 07:37:37] 2025-11-24 06:29:28,190 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-24 07:37:37] 2025-11-24 06:29:28,190 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-24 07:37:37] 2025-11-24 06:29:28,190 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-24 07:37:37] 2025-11-24 06:29:28,190 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-24 07:37:37] 2025-11-24 06:29:28,190 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-24 07:37:37] 2025-11-24 06:29:28,190 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-24 07:37:37] 2025-11-24 06:29:28,190 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-24 07:37:37] 2025-11-24 06:29:28,190 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-24 07:37:37] 2025-11-24 06:29:28,190 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-24 07:37:37] 2025-11-24 06:29:28,190 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-24 07:37:37] 2025-11-24 06:29:28,190 | INFO     | job 6893857044 has completed (purged errors)
[2025-11-24 07:37:37] 2025-11-24 06:29:28,191 | INFO     | overall cleanup function is called
[2025-11-24 07:37:37] 2025-11-24 06:29:29,206 | INFO     | --- collectZombieJob: --- 10, [1197274]
[2025-11-24 07:37:37] 2025-11-24 06:29:29,209 | INFO     | zombie collector waiting for pid 1197274
[2025-11-24 07:37:37] 2025-11-24 06:29:29,209 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-24 07:37:37] 2025-11-24 06:29:29,209 | INFO     | collected zombie processes
[2025-11-24 07:37:37] 2025-11-24 06:29:29,209 | INFO     | will attempt to kill all subprocesses of pid=1197274
[2025-11-24 07:37:37] 2025-11-24 06:29:30,022 | INFO     | process IDs to be killed: [1197274] (in reverse order)
[2025-11-24 07:37:37] 2025-11-24 06:29:30,283 | WARNING  | found no corresponding commands to process id(s)
[2025-11-24 07:37:37] 2025-11-24 06:29:30,283 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-24 07:37:37] 2025-11-24 06:29:30,316 | INFO     | did not find any defunct processes belonging to 1197274
[2025-11-24 07:37:37] 2025-11-24 06:29:30,348 | INFO     | did not find any defunct processes belonging to 1197274
[2025-11-24 07:37:37] 2025-11-24 06:29:30,349 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-24 07:37:37] 2025-11-24 06:29:30,350 | INFO     | ready for new job
[2025-11-24 07:37:37] 2025-11-24 06:29:30,350 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-24 07:37:37] 2025-11-24 06:29:30,357 | INFO     | ***************************************
[2025-11-24 07:37:37] 2025-11-24 06:29:30,357 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-24 07:37:37] 2025-11-24 06:29:30,357 | INFO     | ***************************************
[2025-11-24 07:37:37] 2025-11-24 06:29:30,357 | INFO     | 
[2025-11-24 07:37:37] 2025-11-24 06:29:30,365 | INFO     | architecture information:
[2025-11-24 07:37:37] 2025-11-24 06:29:30,366 | INFO     | executing command: cat /etc/os-release
[2025-11-24 07:37:37] 2025-11-24 06:29:30,387 | INFO     | cat /etc/os-release:
[2025-11-24 07:37:37] NAME="CentOS Linux"
[2025-11-24 07:37:37] VERSION="7 (Core)"
[2025-11-24 07:37:37] ID="centos"
[2025-11-24 07:37:37] ID_LIKE="rhel fedora"
[2025-11-24 07:37:37] VERSION_ID="7"
[2025-11-24 07:37:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-24 07:37:37] ANSI_COLOR="0;31"
[2025-11-24 07:37:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-24 07:37:37] HOME_URL="https://www.centos.org/"
[2025-11-24 07:37:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-24 07:37:37] 
[2025-11-24 07:37:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-24 07:37:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-24 07:37:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-24 07:37:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-24 07:37:37] 
[2025-11-24 07:37:37] 2025-11-24 06:29:30,388 | INFO     | ***************************************
[2025-11-24 07:37:37] 2025-11-24 06:29:30,889 | INFO     | executing command: df -mP /scratch/boinc/var/slot108/slots/0
[2025-11-24 07:37:37] 2025-11-24 06:29:30,910 | INFO     | sufficient remaining disk space (3311859138560 B)
[2025-11-24 07:37:37] 2025-11-24 06:29:30,910 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-24 07:37:37] 2025-11-24 06:29:30,910 | INFO     | current server update state: UPDATING_FINAL
[2025-11-24 07:37:37] 2025-11-24 06:29:30,910 | INFO     | update_server=False
[2025-11-24 07:37:37] 2025-11-24 06:29:30,913 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-24 07:37:37] 2025-11-24 06:29:30,914 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-24 07:37:37] 2025-11-24 06:29:30,914 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-24 07:37:37] 2025-11-24 06:29:31,150 | INFO     | all payload control threads have been joined
[2025-11-24 07:37:37] 2025-11-24 06:29:31,270 | INFO     | all job control threads have been joined
[2025-11-24 07:37:37] 2025-11-24 06:29:31,788 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-24 07:37:37] 2025-11-24 06:29:31,788 | INFO     | aborting loop
[2025-11-24 07:37:37] 2025-11-24 06:29:31,854 | INFO     | all data control threads have been joined
[2025-11-24 07:37:37] 2025-11-24 06:29:31,918 | INFO     | [job] retrieve thread has finished
[2025-11-24 07:37:37] 2025-11-24 06:29:32,023 | INFO     | [payload] execute_payloads thread has finished
[2025-11-24 07:37:37] 2025-11-24 06:29:32,155 | INFO     | [payload] control thread has finished
[2025-11-24 07:37:37] 2025-11-24 06:29:32,276 | INFO     | [job] control thread has finished
[2025-11-24 07:37:37] 2025-11-24 06:29:32,292 | INFO     | [data] copytool_in thread has finished
[2025-11-24 07:37:37] 2025-11-24 06:29:32,615 | INFO     | [job] create_data_payload thread has finished
[2025-11-24 07:37:37] 2025-11-24 06:29:32,676 | INFO     | [job] validate thread has finished
[2025-11-24 07:37:37] 2025-11-24 06:29:32,794 | INFO     | [job] job monitor thread has finished
[2025-11-24 07:37:37] 2025-11-24 06:29:32,859 | INFO     | [data] control thread has finished
[2025-11-24 07:37:37] 2025-11-24 06:29:32,914 | INFO     | [payload] validate_pre thread has finished
[2025-11-24 07:37:37] 2025-11-24 06:29:32,919 | INFO     | [data] copytool_out thread has finished
[2025-11-24 07:37:37] 2025-11-24 06:29:33,046 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-24 07:37:37] 2025-11-24 06:29:33,169 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-24 07:37:37] 2025-11-24 06:29:33,364 | INFO     | [payload] validate_post thread has finished
[2025-11-24 07:37:37] 2025-11-24 06:29:33,373 | INFO     | [payload] failed_post thread has finished
[2025-11-24 07:37:37] 2025-11-24 06:29:34,174 | INFO     | [job] queue monitor thread has finished
[2025-11-24 07:37:37] 2025-11-24 06:29:34,919 | INFO     | [data] queue_monitor thread has finished
[2025-11-24 07:37:37] 2025-11-24 06:29:59,383 | INFO     | [monitor] cgroup control has ended
[2025-11-24 07:37:37] 2025-11-24 06:30:00,497 | INFO     | PID=1186607 has CPU usage=6.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-24 07:37:37] 2025-11-24 06:30:00,497 | INFO     | .. there are 10 such processes running
[2025-11-24 07:37:37] 2025-11-24 06:30:00,498 | INFO     | found 0 job(s) in 20 queues
[2025-11-24 07:37:37] 2025-11-24 06:30:00,498 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-24 07:37:37] 2025-11-24 06:30:00,498 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-24 07:37:37] 2025-11-24 06:30:01,215 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23202654123840)>', '<ExcThread(monitor, started 23202210232064)>']
[2025-11-24 07:37:37] 2025-11-24 06:30:01,506 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-24 07:37:37] 2025-11-24 06:30:01,506 | INFO     | [monitor] control thread has ended
[2025-11-24 07:37:37] 2025-11-24 06:30:06,240 | INFO     | all workflow threads have been joined
[2025-11-24 07:37:37] 2025-11-24 06:30:06,243 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-24 07:37:37] 2025-11-24 06:30:06,243 | INFO     | traces error code: 0
[2025-11-24 07:37:37] 2025-11-24 06:30:06,244 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-24 07:37:37] 2025-11-24 06:30:06,381 [wrapper] ==== pilot stdout END ====
[2025-11-24 07:37:37] 2025-11-24 06:30:06,386 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-24 07:37:37] 2025-11-24 06:30:06,390 [wrapper] pilotpid: 1186607
[2025-11-24 07:37:37] 2025-11-24 06:30:06,394 [wrapper] Pilot exit status: 0
[2025-11-24 07:37:37] 2025-11-24 06:30:06,409 [wrapper] pandaids: 6893857044
[2025-11-24 07:37:37] 2025-11-24 06:30:06,585 [wrapper] cleanup supervisor_pilot 2812545 1186608
[2025-11-24 07:37:37] 2025-11-24 06:30:06,589 [wrapper] Test setup, not cleaning
[2025-11-24 07:37:37] 2025-11-24 06:30:06,593 [wrapper] apfmon messages muted
[2025-11-24 07:37:37] 2025-11-24 06:30:06,597 [wrapper] ==== wrapper stdout END ====
[2025-11-24 07:37:37] 2025-11-24 06:30:06,600 [wrapper] ==== wrapper stderr END ====
[2025-11-24 07:37:37]  *** Error codes and diagnostics ***
[2025-11-24 07:37:37]     "exeErrorCode": 0,
[2025-11-24 07:37:37]     "exeErrorDiag": "",
[2025-11-24 07:37:37]     "pilotErrorCode": 0,
[2025-11-24 07:37:37]     "pilotErrorDiag": "",
[2025-11-24 07:37:37]  *** Listing of results directory ***
[2025-11-24 07:37:37] total 1325736
[2025-11-24 07:37:37] -rw-r--r-- 1 boinc boinc    576529 Nov 20 13:07 pilot3.tar.gz
[2025-11-24 07:37:37] -rw-r--r-- 1 boinc boinc      5112 Nov 20 13:52 queuedata.json
[2025-11-24 07:37:37] -rwx------ 1 boinc boinc     36292 Nov 20 13:53 runpilot2-wrapper.sh
[2025-11-24 07:37:37] -rw-r--r-- 1 boinc boinc       100 Nov 23 15:33 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-24 07:37:37] -rwxr-xr-x 1 boinc boinc      7986 Nov 23 15:33 run_atlas
[2025-11-24 07:37:37] -rw-r--r-- 1 boinc boinc       105 Nov 23 15:33 job.xml
[2025-11-24 07:37:37] -rw-r--r-- 2 boinc boinc 411064020 Nov 23 15:33 EVNT.47493127._000475.pool.root.1
[2025-11-24 07:37:37] -rw-r--r-- 1 boinc boinc      6688 Nov 23 15:33 init_data.xml
[2025-11-24 07:37:37] -rw-r--r-- 2 boinc boinc     15847 Nov 23 15:33 start_atlas.sh
[2025-11-24 07:37:37] drwxrwx--x 2 boinc boinc      4096 Nov 23 15:33 shared
[2025-11-24 07:37:37] -rw-r--r-- 2 boinc boinc    590103 Nov 23 15:33 input.tar.gz
[2025-11-24 07:37:37] -rw-r--r-- 1 boinc boinc         0 Nov 23 15:33 boinc_lockfile
[2025-11-24 07:37:37] -rw-r--r-- 1 boinc boinc      2783 Nov 23 15:33 pandaJob.out
[2025-11-24 07:37:37] -rw------- 1 boinc boinc    989785 Nov 23 15:34 agis_schedconf.cvmfs.json
[2025-11-24 07:37:37] drwx------ 5 boinc boinc      4096 Nov 23 15:34 pilot3
[2025-11-24 07:37:37] -rw-r--r-- 1 boinc boinc       532 Nov 24 07:21 boinc_task_state.xml
[2025-11-24 07:37:37] -rw------- 1 boinc boinc 923429577 Nov 24 07:28 HITS.47523449._004741.pool.root.1
[2025-11-24 07:37:37] -rw------- 1 boinc boinc      1039 Nov 24 07:29 memory_monitor_summary.json
[2025-11-24 07:37:37] -rw------- 1 boinc boinc   1526164 Nov 24 07:29 agis_ddmendpoints.agis.ALL.json
[2025-11-24 07:37:37] -rw------- 1 boinc boinc   1676411 Nov 24 07:29 log.47523449._004741.job.log.tgz.1
[2025-11-24 07:37:37] -rw------- 1 boinc boinc      8593 Nov 24 07:29 heartbeat.json
[2025-11-24 07:37:37] -rw------- 1 boinc boinc        95 Nov 24 07:30 pilot_heartbeat.json
[2025-11-24 07:37:37] -rw------- 1 boinc boinc      4836 Nov 24 07:30 pilotlog.txt
[2025-11-24 07:37:37] -rw------- 1 boinc boinc   7893028 Nov 24 07:30 log.47523449._004741.job.log.1
[2025-11-24 07:37:37] -rw------- 1 boinc boinc       353 Nov 24 07:30 output.list
[2025-11-24 07:37:37] -rw-r--r-- 1 boinc boinc       620 Nov 24 07:30 runtime_log
[2025-11-24 07:37:37] -rw------- 1 boinc boinc   9584640 Nov 24 07:30 result.tar.gz
[2025-11-24 07:37:37] -rw-r--r-- 1 boinc boinc      9223 Nov 24 07:30 runtime_log.err
[2025-11-24 07:37:37] -rw------- 1 boinc boinc       670 Nov 24 07:30 k2OMDmZLJg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm2qHKDmsDPxxn.diag
[2025-11-24 07:37:37] -rw-r--r-- 1 boinc boinc        28 Nov 24 07:37 wrapper_checkpoint.txt
[2025-11-24 07:37:37] -rw-r--r-- 1 boinc boinc      8192 Nov 24 07:37 boinc_mmap_file
[2025-11-24 07:37:37] -rw-r--r-- 1 boinc boinc     21237 Nov 24 07:37 stderr.txt
[2025-11-24 07:37:37] HITS file was successfully produced:
[2025-11-24 07:37:37] -rw------- 1 boinc boinc 923429577 Nov 24 07:28 shared/HITS.pool.root.1
[2025-11-24 07:37:37]  *** Contents of shared directory: ***
[2025-11-24 07:37:37] total 1313184
[2025-11-24 07:37:37] -rw-r--r-- 2 boinc boinc 411064020 Nov 23 15:33 ATLAS.root_0
[2025-11-24 07:37:37] -rw-r--r-- 2 boinc boinc     15847 Nov 23 15:33 start_atlas.sh
[2025-11-24 07:37:37] -rw-r--r-- 2 boinc boinc    590103 Nov 23 15:33 input.tar.gz
[2025-11-24 07:37:37] -rw------- 1 boinc boinc 923429577 Nov 24 07:28 HITS.pool.root.1
[2025-11-24 07:37:37] -rw------- 1 boinc boinc   9584640 Nov 24 07:30 result.tar.gz
07:37:38 (1182337): run_atlas exited; CPU time 228294.847546
07:37:38 (1182337): called boinc_finish(0)

</stderr_txt>
]]>

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