Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
03:31:57 (53120): wrapper (7.7.26015): starting
03:31:57 (53120): wrapper: running run_atlas (--nthreads 4)
[2025-11-27 03:31:57] Arguments: --nthreads 4
[2025-11-27 03:31:57] Threads: 4
[2025-11-27 03:31:57] Checking for CVMFS
[2025-11-27 03:31:57] No cvmfs_config command found, will try listing directly
[2025-11-27 03:31:57] CVMFS is ok
[2025-11-27 03:31:57] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-27 03:31:57] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-27 03:31:57] Further information can be found at the LHC@home message board.
[2025-11-27 03:31:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-27 03:31:57] Checking for apptainer binary...
[2025-11-27 03:31:57] which: no apptainer in ((null))
[2025-11-27 03:31:57] apptainer is not installed, using version from CVMFS
[2025-11-27 03:31:57] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-27 03:31:58] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot112/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2025-11-27 03:31:58] apptainer works
[2025-11-27 03:31:58] Set ATHENA_PROC_NUMBER=4
[2025-11-27 03:31:58] Set ATHENA_CORE_NUMBER=4
[2025-11-27 03:31:58] Starting ATLAS job with PandaID=6893855931
[2025-11-27 03:31:58] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot112/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-27 18:30:46]  *** The last 200 lines of the pilot log: ***
[2025-11-27 18:30:46] 2025-11-27 17:22:49,516 | INFO     | time since job start (53437s) is within the limit (172800.0s)
[2025-11-27 18:30:46] 2025-11-27 17:22:49,760 | INFO     | monitor loop #3623: job 0:6893855931 is in state 'finished'
[2025-11-27 18:30:46] 2025-11-27 17:22:49,761 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-27 18:30:46] 2025-11-27 17:22:50,999 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-27 18:30:46] 2025-11-27 17:22:51,021 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2710.665335937499
[2025-11-27 18:30:46] 2025-11-27 17:22:51,045 | INFO     | using path: /scratch/boinc/var/slot112/slots/0/PanDA_Pilot-6893855931/memory_monitor_summary.json (trf name=prmon)
[2025-11-27 18:30:46] 2025-11-27 17:22:51,045 | INFO     | extracted standard info from prmon json
[2025-11-27 18:30:46] 2025-11-27 17:22:51,046 | INFO     | extracted standard memory fields from prmon json
[2025-11-27 18:30:46] 2025-11-27 17:22:51,046 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-27 18:30:46] 2025-11-27 17:22:51,061 | INFO     | fitting pss+swap vs Time
[2025-11-27 18:30:46] 2025-11-27 17:22:51,062 | INFO     | sum of square deviations: 208444373375.0
[2025-11-27 18:30:46] 2025-11-27 17:22:51,078 | INFO     | sum of deviations: 580664698101.5002
[2025-11-27 18:30:46] 2025-11-27 17:22:51,079 | INFO     | mean x: 1764237454.5
[2025-11-27 18:30:46] 2025-11-27 17:22:51,079 | INFO     | mean y: 2271208.0878995433
[2025-11-27 18:30:46] 2025-11-27 17:22:51,079 | INFO     | intersect: -4912375286.368486
[2025-11-27 18:30:46] 2025-11-27 17:22:51,080 | INFO     | chi2: 4.051603567871443
[2025-11-27 18:30:46] 2025-11-27 17:22:51,081 | INFO     | sum of square deviations: 204895451020.0
[2025-11-27 18:30:46] 2025-11-27 17:22:51,097 | INFO     | sum of deviations: 761140468233.9999
[2025-11-27 18:30:46] 2025-11-27 17:22:51,097 | INFO     | mean x: 1764237302.0
[2025-11-27 18:30:46] 2025-11-27 17:22:51,097 | INFO     | mean y: 2278955.045924225
[2025-11-27 18:30:46] 2025-11-27 17:22:51,097 | INFO     | intersect: -6551465403.04182
[2025-11-27 18:30:46] 2025-11-27 17:22:51,098 | INFO     | chi2: 1.88628926843159
[2025-11-27 18:30:46] 2025-11-27 17:22:51,098 | INFO     | current chi2=1.88628926843159 (change=53.4433900841248 %)
[2025-11-27 18:30:46] 2025-11-27 17:22:51,099 | INFO     | sum of square deviations: 201387041052.5
[2025-11-27 18:30:46] 2025-11-27 17:22:51,115 | INFO     | sum of deviations: 756922269617.0001
[2025-11-27 18:30:46] 2025-11-27 17:22:51,115 | INFO     | mean x: 1764237149.5
[2025-11-27 18:30:46] 2025-11-27 17:22:51,116 | INFO     | mean y: 2278770.775981524
[2025-11-27 18:30:46] 2025-11-27 17:22:51,116 | INFO     | intersect: -6628686063.719208
[2025-11-27 18:30:46] 2025-11-27 17:22:51,117 | INFO     | chi2: 1.878877936941512
[2025-11-27 18:30:46] 2025-11-27 17:22:51,117 | INFO     | current chi2=1.878877936941512 (change=0.39290535201105475 %)
[2025-11-27 18:30:46] 2025-11-27 17:22:51,117 | INFO     | right removable region: 865
[2025-11-27 18:30:46] 2025-11-27 17:22:51,118 | INFO     | sum of square deviations: 204895451020.0
[2025-11-27 18:30:46] 2025-11-27 17:22:51,134 | INFO     | sum of deviations: 429119440180.999
[2025-11-27 18:30:46] 2025-11-27 17:22:51,134 | INFO     | mean x: 1764237607.0
[2025-11-27 18:30:46] 2025-11-27 17:22:51,134 | INFO     | mean y: 2277705.752009185
[2025-11-27 18:30:46] 2025-11-27 17:22:51,134 | INFO     | intersect: -3692624501.658185
[2025-11-27 18:30:46] 2025-11-27 17:22:51,135 | INFO     | chi2: 2.2399786272035387
[2025-11-27 18:30:46] 2025-11-27 17:22:51,135 | INFO     | current chi2=2.2399786272035387 (change=44.71377592402661 %)
[2025-11-27 18:30:46] 2025-11-27 17:22:51,136 | INFO     | sum of square deviations: 201387041052.5
[2025-11-27 18:30:46] 2025-11-27 17:22:51,153 | INFO     | sum of deviations: 408010573333.5
[2025-11-27 18:30:46] 2025-11-27 17:22:51,154 | INFO     | mean x: 1764237759.5
[2025-11-27 18:30:46] 2025-11-27 17:22:51,154 | INFO     | mean y: 2278622.7517321017
[2025-11-27 18:30:46] 2025-11-27 17:22:51,154 | INFO     | intersect: -3572070828.8723736
[2025-11-27 18:30:46] 2025-11-27 17:22:51,155 | INFO     | chi2: 2.230320762098323
[2025-11-27 18:30:46] 2025-11-27 17:22:51,155 | INFO     | current chi2=2.230320762098323 (change=0.4311588060674 %)
[2025-11-27 18:30:46] 2025-11-27 17:22:51,155 | INFO     | left removable region: 20
[2025-11-27 18:30:46] 2025-11-27 17:22:51,156 | INFO     | sum of square deviations: 187088865990.0
[2025-11-27 18:30:46] 2025-11-27 17:22:51,172 | INFO     | sum of deviations: 558867884661.0
[2025-11-27 18:30:46] 2025-11-27 17:22:51,173 | INFO     | mean x: 1764237729.0
[2025-11-27 18:30:46] 2025-11-27 17:22:51,173 | INFO     | mean y: 2287382.3218934913
[2025-11-27 18:30:46] 2025-11-27 17:22:51,173 | INFO     | intersect: -5267806069.9418955
[2025-11-27 18:30:46] 2025-11-27 17:22:51,174 | INFO     | chi2: 0.04377359119845781
[2025-11-27 18:30:46] 2025-11-27 17:22:51,174 | INFO     | current memory leak: 2.99 B/s (using 845 data points, chi2=0.04)
[2025-11-27 18:30:46] 2025-11-27 17:22:51,175 | INFO     | could have reported an average CPU frequency of 2695 MHz (33 samples)
[2025-11-27 18:30:46] 2025-11-27 17:22:51,175 | INFO     | ..............................
[2025-11-27 18:30:46] 2025-11-27 17:22:51,175 | INFO     | . Timing measurements:
[2025-11-27 18:30:46] 2025-11-27 17:22:51,175 | INFO     | . get job = 0 s
[2025-11-27 18:30:46] 2025-11-27 17:22:51,175 | INFO     | . initial setup = 1 s
[2025-11-27 18:30:46] 2025-11-27 17:22:51,175 | INFO     | . payload setup = 9 s
[2025-11-27 18:30:46] 2025-11-27 17:22:51,175 | INFO     | . stage-in = 0 s
[2025-11-27 18:30:46] 2025-11-27 17:22:51,175 | INFO     | . payload execution = 53394 s
[2025-11-27 18:30:46] 2025-11-27 17:22:51,175 | INFO     | . stage-out = 2 s
[2025-11-27 18:30:46] 2025-11-27 17:22:51,175 | INFO     | . log creation = 0 s
[2025-11-27 18:30:46] 2025-11-27 17:22:51,176 | INFO     | ..............................
[2025-11-27 18:30:46] 2025-11-27 17:22:51,494 | INFO     | 
[2025-11-27 18:30:46] 2025-11-27 17:22:51,495 | INFO     | job summary report
[2025-11-27 18:30:46] 2025-11-27 17:22:51,495 | INFO     | --------------------------------------------------
[2025-11-27 18:30:46] 2025-11-27 17:22:51,495 | INFO     | PanDA job id: 6893855931
[2025-11-27 18:30:46] 2025-11-27 17:22:51,495 | INFO     | task id: 47523449
[2025-11-27 18:30:46] 2025-11-27 17:22:51,495 | INFO     | errors: (none)
[2025-11-27 18:30:46] 2025-11-27 17:22:51,495 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-27 18:30:46] 2025-11-27 17:22:51,495 | INFO     | pilot state: finished 
[2025-11-27 18:30:46] 2025-11-27 17:22:51,495 | INFO     | transexitcode: 0
[2025-11-27 18:30:46] 2025-11-27 17:22:51,495 | INFO     | exeerrorcode: 0
[2025-11-27 18:30:46] 2025-11-27 17:22:51,495 | INFO     | exeerrordiag: 
[2025-11-27 18:30:46] 2025-11-27 17:22:51,495 | INFO     | exitcode: 0
[2025-11-27 18:30:46] 2025-11-27 17:22:51,496 | INFO     | exitmsg: OK
[2025-11-27 18:30:46] 2025-11-27 17:22:51,496 | INFO     | cpuconsumptiontime: 211599 s
[2025-11-27 18:30:46] 2025-11-27 17:22:51,496 | INFO     | nevents: 1000
[2025-11-27 18:30:46] 2025-11-27 17:22:51,496 | INFO     | neventsw: 0
[2025-11-27 18:30:46] 2025-11-27 17:22:51,496 | INFO     | pid: 64874
[2025-11-27 18:30:46] 2025-11-27 17:22:51,496 | INFO     | pgrp: 64874
[2025-11-27 18:30:46] 2025-11-27 17:22:51,496 | INFO     | corecount: 4
[2025-11-27 18:30:46] 2025-11-27 17:22:51,496 | INFO     | event service: False
[2025-11-27 18:30:46] 2025-11-27 17:22:51,496 | INFO     | sizes: {0: 2284162, 1: 2284304, 7: 2284566, 11: 2284594, 53407: 2336624, 53411: 2345642, 53413: 2345826, 53420: 2346136}
[2025-11-27 18:30:46] 2025-11-27 17:22:51,496 | INFO     | --------------------------------------------------
[2025-11-27 18:30:46] 2025-11-27 17:22:51,496 | INFO     | 
[2025-11-27 18:30:46] 2025-11-27 17:22:51,496 | INFO     | executing command: ls -lF /scratch/boinc/var/slot112/slots/0
[2025-11-27 18:30:46] 2025-11-27 17:22:51,521 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-27 18:30:46] 2025-11-27 17:22:51,521 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-27 18:30:46] 2025-11-27 17:22:51,521 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-27 18:30:46] 2025-11-27 17:22:51,521 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-27 18:30:46] 2025-11-27 17:22:51,521 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-27 18:30:46] 2025-11-27 17:22:51,521 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-27 18:30:46] 2025-11-27 17:22:51,521 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-27 18:30:46] 2025-11-27 17:22:51,521 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-27 18:30:46] 2025-11-27 17:22:51,522 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-27 18:30:46] 2025-11-27 17:22:51,522 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-27 18:30:46] 2025-11-27 17:22:51,522 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-27 18:30:46] 2025-11-27 17:22:51,522 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-27 18:30:46] 2025-11-27 17:22:51,522 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-27 18:30:46] 2025-11-27 17:22:51,522 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-27 18:30:46] 2025-11-27 17:22:51,522 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-27 18:30:46] 2025-11-27 17:22:51,522 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-27 18:30:46] 2025-11-27 17:22:51,522 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-27 18:30:46] 2025-11-27 17:22:51,522 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-27 18:30:46] 2025-11-27 17:22:51,522 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-27 18:30:46] 2025-11-27 17:22:51,523 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-27 18:30:46] 2025-11-27 17:22:51,523 | INFO     | job 6893855931 has completed (purged errors)
[2025-11-27 18:30:46] 2025-11-27 17:22:51,523 | INFO     | overall cleanup function is called
[2025-11-27 18:30:46] 2025-11-27 17:22:52,539 | INFO     | --- collectZombieJob: --- 10, [64874]
[2025-11-27 18:30:46] 2025-11-27 17:22:52,540 | INFO     | zombie collector waiting for pid 64874
[2025-11-27 18:30:46] 2025-11-27 17:22:52,540 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-27 18:30:46] 2025-11-27 17:22:52,540 | INFO     | collected zombie processes
[2025-11-27 18:30:46] 2025-11-27 17:22:52,540 | INFO     | will attempt to kill all subprocesses of pid=64874
[2025-11-27 18:30:46] 2025-11-27 17:22:53,079 | INFO     | process IDs to be killed: [64874] (in reverse order)
[2025-11-27 18:30:46] 2025-11-27 17:22:53,317 | WARNING  | found no corresponding commands to process id(s)
[2025-11-27 18:30:46] 2025-11-27 17:22:53,317 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-27 18:30:46] 2025-11-27 17:22:53,358 | INFO     | did not find any defunct processes belonging to 64874
[2025-11-27 18:30:46] 2025-11-27 17:22:53,391 | INFO     | did not find any defunct processes belonging to 64874
[2025-11-27 18:30:46] 2025-11-27 17:22:53,392 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-27 18:30:46] 2025-11-27 17:22:53,392 | INFO     | ready for new job
[2025-11-27 18:30:46] 2025-11-27 17:22:53,392 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-27 18:30:46] 2025-11-27 17:22:53,398 | INFO     | ***************************************
[2025-11-27 18:30:46] 2025-11-27 17:22:53,398 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-27 18:30:46] 2025-11-27 17:22:53,398 | INFO     | ***************************************
[2025-11-27 18:30:46] 2025-11-27 17:22:53,398 | INFO     | 
[2025-11-27 18:30:46] 2025-11-27 17:22:53,406 | INFO     | architecture information:
[2025-11-27 18:30:46] 2025-11-27 17:22:53,407 | INFO     | executing command: cat /etc/os-release
[2025-11-27 18:30:46] 2025-11-27 17:22:53,427 | INFO     | cat /etc/os-release:
[2025-11-27 18:30:46] NAME="CentOS Linux"
[2025-11-27 18:30:46] VERSION="7 (Core)"
[2025-11-27 18:30:46] ID="centos"
[2025-11-27 18:30:46] ID_LIKE="rhel fedora"
[2025-11-27 18:30:46] VERSION_ID="7"
[2025-11-27 18:30:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-27 18:30:46] ANSI_COLOR="0;31"
[2025-11-27 18:30:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-27 18:30:46] HOME_URL="https://www.centos.org/"
[2025-11-27 18:30:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-27 18:30:46] 
[2025-11-27 18:30:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-27 18:30:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-27 18:30:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-27 18:30:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-27 18:30:46] 
[2025-11-27 18:30:46] 2025-11-27 17:22:53,427 | INFO     | ***************************************
[2025-11-27 18:30:46] 2025-11-27 17:22:53,929 | INFO     | executing command: df -mP /scratch/boinc/var/slot112/slots/0
[2025-11-27 18:30:46] 2025-11-27 17:22:53,950 | INFO     | sufficient remaining disk space (3296582434816 B)
[2025-11-27 18:30:46] 2025-11-27 17:22:53,951 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-27 18:30:46] 2025-11-27 17:22:53,951 | INFO     | current server update state: UPDATING_FINAL
[2025-11-27 18:30:46] 2025-11-27 17:22:53,951 | INFO     | update_server=False
[2025-11-27 18:30:46] 2025-11-27 17:22:53,951 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-27 18:30:46] 2025-11-27 17:22:53,952 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-27 18:30:46] 2025-11-27 17:22:53,953 | INFO     | aborting loop
[2025-11-27 18:30:46] 2025-11-27 17:22:53,989 | INFO     | all data control threads have been joined
[2025-11-27 18:30:46] 2025-11-27 17:22:54,089 | INFO     | all payload control threads have been joined
[2025-11-27 18:30:46] 2025-11-27 17:22:54,207 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-27 18:30:46] 2025-11-27 17:22:54,611 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-27 18:30:46] 2025-11-27 17:22:54,957 | INFO     | [job] retrieve thread has finished
[2025-11-27 18:30:46] 2025-11-27 17:22:54,958 | INFO     | [job] job monitor thread has finished
[2025-11-27 18:30:46] 2025-11-27 17:22:54,994 | INFO     | [data] control thread has finished
[2025-11-27 18:30:46] 2025-11-27 17:22:55,060 | INFO     | all job control threads have been joined
[2025-11-27 18:30:46] 2025-11-27 17:22:55,093 | INFO     | [payload] control thread has finished
[2025-11-27 18:30:46] 2025-11-27 17:22:55,131 | INFO     | [job] create_data_payload thread has finished
[2025-11-27 18:30:46] 2025-11-27 17:22:55,161 | INFO     | [job] validate thread has finished
[2025-11-27 18:30:46] 2025-11-27 17:22:55,353 | INFO     | [payload] execute_payloads thread has finished
[2025-11-27 18:30:46] 2025-11-27 17:22:55,520 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-27 18:30:46] 2025-11-27 17:22:55,715 | INFO     | [payload] failed_post thread has finished
[2025-11-27 18:30:46] 2025-11-27 17:22:55,964 | INFO     | [payload] validate_pre thread has finished
[2025-11-27 18:30:46] 2025-11-27 17:22:56,065 | INFO     | [job] control thread has finished
[2025-11-27 18:30:46] 2025-11-27 17:22:56,280 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-27 18:30:46] 2025-11-27 17:22:56,435 | INFO     | [data] copytool_in thread has finished
[2025-11-27 18:30:46] 2025-11-27 17:22:56,550 | INFO     | [payload] validate_post thread has finished
[2025-11-27 18:30:46] 2025-11-27 17:22:56,616 | INFO     | [data] copytool_out thread has finished
[2025-11-27 18:30:46] 2025-11-27 17:22:57,285 | INFO     | [job] queue monitor thread has finished
[2025-11-27 18:30:46] 2025-11-27 17:22:58,212 | INFO     | [data] queue_monitor thread has finished
[2025-11-27 18:30:46] 2025-11-27 17:23:23,589 | INFO     | PID=57163 has CPU usage=5.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-27 18:30:46] 2025-11-27 17:23:23,589 | INFO     | .. there are 5 such processes running
[2025-11-27 18:30:46] 2025-11-27 17:23:23,590 | INFO     | found 0 job(s) in 20 queues
[2025-11-27 18:30:46] 2025-11-27 17:23:23,590 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-27 18:30:46] 2025-11-27 17:23:23,590 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-27 18:30:46] 2025-11-27 17:23:37,325 | INFO     | [monitor] cgroup control has ended
[2025-11-27 18:30:46] 2025-11-27 17:23:38,855 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22647684593472)>', '<ExcThread(monitor, started 22646555141888)>']
[2025-11-27 18:30:46] 2025-11-27 17:23:39,667 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-27 18:30:46] 2025-11-27 17:23:39,668 | INFO     | [monitor] control thread has ended
[2025-11-27 18:30:46] 2025-11-27 17:23:43,872 | INFO     | all workflow threads have been joined
[2025-11-27 18:30:46] 2025-11-27 17:23:43,873 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-27 18:30:46] 2025-11-27 17:23:43,873 | INFO     | traces error code: 0
[2025-11-27 18:30:46] 2025-11-27 17:23:43,873 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-27 18:30:46] 2025-11-27 17:23:44,027 [wrapper] ==== pilot stdout END ====
[2025-11-27 18:30:46] 2025-11-27 17:23:44,031 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-27 18:30:46] 2025-11-27 17:23:44,035 [wrapper] pilotpid: 57163
[2025-11-27 18:30:46] 2025-11-27 17:23:44,039 [wrapper] Pilot exit status: 0
[2025-11-27 18:30:46] 2025-11-27 17:23:44,053 [wrapper] pandaids: 6893855931
[2025-11-27 18:30:46] 2025-11-27 17:23:44,225 [wrapper] cleanup supervisor_pilot 1189335 57164
[2025-11-27 18:30:46] 2025-11-27 17:23:44,229 [wrapper] Test setup, not cleaning
[2025-11-27 18:30:46] 2025-11-27 17:23:44,233 [wrapper] apfmon messages muted
[2025-11-27 18:30:46] 2025-11-27 17:23:44,237 [wrapper] ==== wrapper stdout END ====
[2025-11-27 18:30:46] 2025-11-27 17:23:44,240 [wrapper] ==== wrapper stderr END ====
[2025-11-27 18:30:46]  *** Error codes and diagnostics ***
[2025-11-27 18:30:46]     "exeErrorCode": 0,
[2025-11-27 18:30:46]     "exeErrorDiag": "",
[2025-11-27 18:30:46]     "pilotErrorCode": 0,
[2025-11-27 18:30:46]     "pilotErrorDiag": "",
[2025-11-27 18:30:46]  *** Listing of results directory ***
[2025-11-27 18:30:46] total 1315484
[2025-11-27 18:30:46] -rw-r--r-- 1 boinc boinc    576529 Nov 20 13:07 pilot3.tar.gz
[2025-11-27 18:30:46] -rwx------ 1 boinc boinc     36292 Nov 20 13:42 runpilot2-wrapper.sh
[2025-11-27 18:30:46] -rw-r--r-- 1 boinc boinc      5112 Nov 20 13:42 queuedata.json
[2025-11-27 18:30:46] -rw-r--r-- 1 boinc boinc       100 Nov 27 03:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-27 18:30:46] -rwxr-xr-x 1 boinc boinc      7986 Nov 27 03:31 run_atlas
[2025-11-27 18:30:46] -rw-r--r-- 1 boinc boinc       105 Nov 27 03:31 job.xml
[2025-11-27 18:30:46] -rw-r--r-- 1 boinc boinc      6688 Nov 27 03:31 init_data.xml
[2025-11-27 18:30:46] -rw-r--r-- 2 boinc boinc 410025555 Nov 27 03:31 EVNT.47493127._000454.pool.root.1
[2025-11-27 18:30:46] -rw-r--r-- 2 boinc boinc     15847 Nov 27 03:31 start_atlas.sh
[2025-11-27 18:30:46] drwxrwx--x 2 boinc boinc      4096 Nov 27 03:31 shared
[2025-11-27 18:30:46] -rw-r--r-- 2 boinc boinc    590092 Nov 27 03:31 input.tar.gz
[2025-11-27 18:30:46] -rw-r--r-- 1 boinc boinc         0 Nov 27 03:31 boinc_lockfile
[2025-11-27 18:30:46] -rw-r--r-- 1 boinc boinc      2785 Nov 27 03:31 pandaJob.out
[2025-11-27 18:30:46] -rw------- 1 boinc boinc    991554 Nov 27 03:32 agis_schedconf.cvmfs.json
[2025-11-27 18:30:46] drwx------ 5 boinc boinc      4096 Nov 27 03:32 pilot3
[2025-11-27 18:30:46] -rw-r--r-- 1 boinc boinc       532 Nov 27 18:17 boinc_task_state.xml
[2025-11-27 18:30:46] -rw------- 1 boinc boinc 915115248 Nov 27 18:22 HITS.47523449._004532.pool.root.1
[2025-11-27 18:30:46] -rw------- 1 boinc boinc      1043 Nov 27 18:22 memory_monitor_summary.json
[2025-11-27 18:30:46] -rw------- 1 boinc boinc   1516240 Nov 27 18:22 agis_ddmendpoints.agis.ALL.json
[2025-11-27 18:30:46] -rw------- 1 boinc boinc   1629481 Nov 27 18:22 log.47523449._004532.job.log.tgz.1
[2025-11-27 18:30:46] -rw------- 1 boinc boinc        95 Nov 27 18:22 pilot_heartbeat.json
[2025-11-27 18:30:46] -rw------- 1 boinc boinc      8593 Nov 27 18:22 heartbeat.json
[2025-11-27 18:30:46] -rw------- 1 boinc boinc      4833 Nov 27 18:23 pilotlog.txt
[2025-11-27 18:30:46] -rw------- 1 boinc boinc   7367989 Nov 27 18:23 log.47523449._004532.job.log.1
[2025-11-27 18:30:46] -rw------- 1 boinc boinc       353 Nov 27 18:23 output.list
[2025-11-27 18:30:46] -rw-r--r-- 1 boinc boinc       620 Nov 27 18:23 runtime_log
[2025-11-27 18:30:46] -rw------- 1 boinc boinc   9021440 Nov 27 18:23 result.tar.gz
[2025-11-27 18:30:46] -rw-r--r-- 1 boinc boinc      9223 Nov 27 18:23 runtime_log.err
[2025-11-27 18:30:46] -rw------- 1 boinc boinc       670 Nov 27 18:23 pifMDmTAJg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmtdGKDmTN9Y4m.diag
[2025-11-27 18:30:46] -rw-r--r-- 1 boinc boinc        28 Nov 27 18:30 wrapper_checkpoint.txt
[2025-11-27 18:30:46] -rw-r--r-- 1 boinc boinc      8192 Nov 27 18:30 boinc_mmap_file
[2025-11-27 18:30:46] -rw-r--r-- 1 boinc boinc     21032 Nov 27 18:30 stderr.txt
[2025-11-27 18:30:46] HITS file was successfully produced:
[2025-11-27 18:30:46] -rw------- 1 boinc boinc 915115248 Nov 27 18:22 shared/HITS.pool.root.1
[2025-11-27 18:30:46]  *** Contents of shared directory: ***
[2025-11-27 18:30:46] total 1303500
[2025-11-27 18:30:46] -rw-r--r-- 2 boinc boinc 410025555 Nov 27 03:31 ATLAS.root_0
[2025-11-27 18:30:46] -rw-r--r-- 2 boinc boinc     15847 Nov 27 03:31 start_atlas.sh
[2025-11-27 18:30:46] -rw-r--r-- 2 boinc boinc    590092 Nov 27 03:31 input.tar.gz
[2025-11-27 18:30:46] -rw------- 1 boinc boinc 915115248 Nov 27 18:22 HITS.pool.root.1
[2025-11-27 18:30:46] -rw------- 1 boinc boinc   9021440 Nov 27 18:23 result.tar.gz
18:30:47 (53120): run_atlas exited; CPU time 214268.843212
18:30:47 (53120): called boinc_finish(0)

</stderr_txt>
]]>

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