Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
12:54:00 (20255): wrapper (7.7.26015): starting
12:54:00 (20255): wrapper: running run_atlas (--nthreads 8)
[2025-11-20 12:54:00] Arguments: --nthreads 8
[2025-11-20 12:54:00] Threads: 8
[2025-11-20 12:54:00] Checking for CVMFS
[2025-11-20 12:54:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-20 12:54:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-20 12:54:00] Running cvmfs_config stat atlas.cern.ch
[2025-11-20 12:54:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-20 12:54:01] 2.11.3.0 920209 20250 209564 153095 2 484 40310099 45568000 15779 130560 0 149690522 99.839 71937706 19584 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.163:3129 1
[2025-11-20 12:54:01] CVMFS is ok
[2025-11-20 12:54:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-20 12:54:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-20 12:54:01] Further information can be found at the LHC@home message board.
[2025-11-20 12:54:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-20 12:54:01] Checking for apptainer binary...
[2025-11-20 12:54:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-20 12:54:01] Running /usr/bin/apptainer --version
[2025-11-20 12:54:01] apptainer version 1.4.1-1.el9
[2025-11-20 12:54:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-20 12:54:02] wns0020.triumf.lcg
[2025-11-20 12:54:02] apptainer works
[2025-11-20 12:54:02] Set ATHENA_PROC_NUMBER=8
[2025-11-20 12:54:02] Set ATHENA_CORE_NUMBER=8
[2025-11-20 12:54:02] Starting ATLAS job with PandaID=6893874098
[2025-11-20 12:54:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-20 12:59:46]  *** The last 200 lines of the pilot log: ***
[2025-11-20 12:59:46] 2025-11-20 20:59:12,987 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-20 12:59:46] 2025-11-20 20:59:12,987 | WARNING  | wrong length of table data, x=[1763672113.0, 1763672174.0], y=[2054.0, 873600.0] (must be same and length>=4)
[2025-11-20 12:59:46] 2025-11-20 20:59:12,988 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-20 12:59:46] 2025-11-20 20:59:12,988 | INFO     | ..............................
[2025-11-20 12:59:46] 2025-11-20 20:59:12,988 | INFO     | . Timing measurements:
[2025-11-20 12:59:46] 2025-11-20 20:59:12,988 | INFO     | . get job = 0 s
[2025-11-20 12:59:46] 2025-11-20 20:59:12,989 | INFO     | . initial setup = 4 s
[2025-11-20 12:59:46] 2025-11-20 20:59:12,989 | INFO     | . payload setup = 11 s
[2025-11-20 12:59:46] 2025-11-20 20:59:12,989 | INFO     | . stage-in = 0 s
[2025-11-20 12:59:46] 2025-11-20 20:59:12,989 | INFO     | . payload execution = 128 s
[2025-11-20 12:59:46] 2025-11-20 20:59:13,004 | INFO     | . stage-out = 0 s
[2025-11-20 12:59:46] 2025-11-20 20:59:13,004 | INFO     | . log creation = 0 s
[2025-11-20 12:59:46] 2025-11-20 20:59:13,004 | INFO     | ..............................
[2025-11-20 12:59:46] 2025-11-20 20:59:13,004 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-20 12:59:46] 2025-11-20 20:59:13,005 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6893874098/pilotlog.txt
[2025-11-20 12:59:46] 2025-11-20 20:59:13,085 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-20 12:59:46] - Log from pilotlog.txt -
[2025-11-20 12:59:46] 2025-11-20 20:59:12,986 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6893874098/memory_monitor_summary.json (trf name=prmon)
[2025-11-20 12:59:46] 2025-11-20 20:59:12,986 | INFO     | extracted standard info from prmon json
[2025-11-20 12:59:46] 2025-11-20 20:59:12,986 | INFO     | extracted standard memory fields from prmon json
[2025-11-20 12:59:46] 2025-11-20 20:59:12,986 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 12:59:46] 2025-11-20 20:59:12,987 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-20 12:59:46] 2025-11-20 20:59:12,987 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-20 12:59:46] 2025-11-20 20:59:12,987 | WARNING  | wrong length of table data, x=[1763672113.0, 1763672174.0], y=[2054.0, 873600.0] (must be same and length>=4)
[2025-11-20 12:59:46] 2025-11-20 20:59:12,988 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-20 12:59:46] 2025-11-20 20:59:12,988 | INFO     | ..............................
[2025-11-20 12:59:46] 2025-11-20 20:59:12,988 | INFO     | . Timing measurements:
[2025-11-20 12:59:46] 2025-11-20 20:59:12,988 | INFO     | . get job = 0 s
[2025-11-20 12:59:46] 2025-11-20 20:59:12,989 | INFO     | . initial setup = 4 s
[2025-11-20 12:59:46] 2025-11-20 20:59:12,989 | INFO     | . payload setup = 11 s
[2025-11-20 12:59:46] 2025-11-20 20:59:12,989 | INFO     | . stage-in = 0 s
[2025-11-20 12:59:46] 2025-11-20 20:59:12,989 | INFO     | . payload execution = 128 s
[2025-11-20 12:59:46] 2025-11-20 20:59:13,004 | INFO     | . stage-out = 0 s
[2025-11-20 12:59:46] 2025-11-20 20:59:13,004 | INFO     | . log creation = 0 s
[2025-11-20 12:59:46] 2025-11-20 20:59:13,004 | INFO     | ..............................
[2025-11-20 12:59:46] 2025-11-20 20:59:13,004 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-20 12:59:46] 2025-11-20 20:59:13,005 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6893874098/pilotlog.txt
[2025-11-20 12:59:46] 2025-11-20 20:59:13,086 | WARNING  | 
[2025-11-20 12:59:46] [begin log extracts]
[2025-11-20 12:59:46] - Log from pilotlog.txt -
[2025-11-20 12:59:46] 2025-11-20 20:59:12,986 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6893874098/memory_monitor_summary.json (trf name=prmon)
[2025-11-20 12:59:46] 2025-11-20 20:59:12,986 | INFO     | extracted standard info from prmon json
[2025-11-20 12:59:46] 2025-11-20 20:59:12,986 | INFO     | extracted standard memory fields from prmon json
[2025-11-20 12:59:46] 2025-11-20 20:59:12,986 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-20 12:59:46] 2025-11-20 20:59:12,987 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-20 12:59:46] 2025-11-20 20:59:12,987 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-20 12:59:46] 2025-11-20 20:59:12,987 | WARNING  | wrong length of table data, x=[1763672113.0, 1763672174.0], y=[2054.0, 873600.0] (must be same and length>=4)
[2025-11-20 12:59:46] 2025-11-20 20:59:12,988 | INFO     | could have reported an average CPU frequency of 2095 MHz (4 samples)
[2025-11-20 12:59:46] 2025-11-20 20:59:12,988 | INFO     | ..............................
[2025-11-20 12:59:46] 2025-11-20 20:59:12,988 | INFO     | . Timing measurements:
[2025-11-20 12:59:46] 2025-11-20 20:59:12,988 | INFO     | . get job = 0 s
[2025-11-20 12:59:46] 2025-11-20 20:59:12,989 | INFO     | . initial setup = 4 s
[2025-11-20 12:59:46] 2025-11-20 20:59:12,989 | INFO     | . payload setup = 11 s
[2025-11-20 12:59:46] 2025-11-20 20:59:12,989 | INFO     | . stage-in = 0 s
[2025-11-20 12:59:46] 2025-11-20 20:59:12,989 | INFO     | . payload execution = 128 s
[2025-11-20 12:59:46] 2025-11-20 20:59:13,004 | INFO     | . stage-out = 0 s
[2025-11-20 12:59:46] 2025-11-20 20:59:13,004 | INFO     | . log creation = 0 s
[2025-11-20 12:59:46] 2025-11-20 20:59:13,004 | INFO     | ..............................
[2025-11-20 12:59:46] 2025-11-20 20:59:13,004 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-20 12:59:46] 2025-11-20 20:59:13,005 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6893874098/pilotlog.txt
[2025-11-20 12:59:46] [end log extracts]
[2025-11-20 12:59:46] 2025-11-20 20:59:13,086 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-20 12:59:46] 2025-11-20 20:59:13,086 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-20 12:59:46] 2025-11-20 20:59:13,577 | INFO     | 
[2025-11-20 12:59:46] 2025-11-20 20:59:13,577 | INFO     | job summary report
[2025-11-20 12:59:46] 2025-11-20 20:59:13,577 | INFO     | --------------------------------------------------
[2025-11-20 12:59:46] 2025-11-20 20:59:13,577 | INFO     | PanDA job id: 6893874098
[2025-11-20 12:59:46] 2025-11-20 20:59:13,577 | INFO     | task id: 47523449
[2025-11-20 12:59:46] 2025-11-20 20:59:13,578 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-20 12:56:59,733 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-20 12:59:46] 2025-11-20 20:59:13,578 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-20 12:59:46] 2025-11-20 20:59:13,578 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-20 12:59:46] 2025-11-20 20:59:13,578 | INFO     | pilot state: failed 
[2025-11-20 12:59:46] 2025-11-20 20:59:13,578 | INFO     | transexitcode: 65
[2025-11-20 12:59:46] 2025-11-20 20:59:13,578 | INFO     | exeerrorcode: 65
[2025-11-20 12:59:46] 2025-11-20 20:59:13,578 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-20 12:59:46] 2025-11-20 20:59:13,578 | INFO     | exitcode: 65
[2025-11-20 12:59:46] 2025-11-20 20:59:13,578 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-20 12:59:46] 2025-11-20 20:59:13,578 | INFO     | cpuconsumptiontime: 50 s
[2025-11-20 12:59:46] 2025-11-20 20:59:13,578 | INFO     | nevents: 0
[2025-11-20 12:59:46] 2025-11-20 20:59:13,578 | INFO     | neventsw: 0
[2025-11-20 12:59:46] 2025-11-20 20:59:13,578 | INFO     | pid: 30535
[2025-11-20 12:59:46] 2025-11-20 20:59:13,578 | INFO     | pgrp: 30535
[2025-11-20 12:59:46] 2025-11-20 20:59:13,578 | INFO     | corecount: 8
[2025-11-20 12:59:46] 2025-11-20 20:59:13,579 | INFO     | event service: False
[2025-11-20 12:59:46] 2025-11-20 20:59:13,579 | INFO     | sizes: {0: 2298632, 1: 2298831, 11: 2299093, 12: 2299121, 143: 2324539, 145: 2328985, 269: 2329123}
[2025-11-20 12:59:46] 2025-11-20 20:59:13,579 | INFO     | --------------------------------------------------
[2025-11-20 12:59:46] 2025-11-20 20:59:13,579 | INFO     | 
[2025-11-20 12:59:46] 2025-11-20 20:59:13,580 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-20 12:59:46] 2025-11-20 20:59:13,602 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-20 12:59:46] 2025-11-20 20:59:13,603 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-20 12:59:46] 2025-11-20 20:59:13,603 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-20 12:59:46] 2025-11-20 20:59:13,603 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-20 12:59:46] 2025-11-20 20:59:13,603 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-20 12:59:46] 2025-11-20 20:59:13,603 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-20 12:59:46] 2025-11-20 20:59:13,603 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-20 12:59:46] 2025-11-20 20:59:13,604 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-20 12:59:46] 2025-11-20 20:59:13,604 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-20 12:59:46] 2025-11-20 20:59:13,604 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-20 12:59:46] 2025-11-20 20:59:13,604 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-20 12:59:46] 2025-11-20 20:59:13,604 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-20 12:59:46] 2025-11-20 20:59:13,604 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-20 12:59:46] 2025-11-20 20:59:13,604 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-20 12:59:46] 2025-11-20 20:59:13,604 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-20 12:59:46] 2025-11-20 20:59:13,604 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-20 12:59:46] 2025-11-20 20:59:13,604 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-20 12:59:46] 2025-11-20 20:59:13,604 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-20 12:59:46] 2025-11-20 20:59:13,604 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-20 12:59:46] 2025-11-20 20:59:13,605 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-20 12:59:46] 2025-11-20 20:59:13,605 | INFO     | job 6893874098 has completed (purged errors)
[2025-11-20 12:59:46] 2025-11-20 20:59:13,605 | INFO     | overall cleanup function is called
[2025-11-20 12:59:46] 2025-11-20 20:59:14,613 | INFO     | --- collectZombieJob: --- 10, [30535]
[2025-11-20 12:59:46] 2025-11-20 20:59:14,614 | INFO     | zombie collector waiting for pid 30535
[2025-11-20 12:59:46] 2025-11-20 20:59:14,614 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-20 12:59:46] 2025-11-20 20:59:14,614 | INFO     | collected zombie processes
[2025-11-20 12:59:46] 2025-11-20 20:59:14,614 | INFO     | will attempt to kill all subprocesses of pid=30535
[2025-11-20 12:59:46] 2025-11-20 20:59:14,825 | INFO     | process IDs to be killed: [30535] (in reverse order)
[2025-11-20 12:59:46] 2025-11-20 20:59:14,887 | WARNING  | found no corresponding commands to process id(s)
[2025-11-20 12:59:46] 2025-11-20 20:59:14,887 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-20 12:59:46] 2025-11-20 20:59:14,895 | INFO     | did not find any defunct processes belonging to 30535
[2025-11-20 12:59:46] 2025-11-20 20:59:14,902 | INFO     | did not find any defunct processes belonging to 30535
[2025-11-20 12:59:46] 2025-11-20 20:59:14,903 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-20 12:59:46] 2025-11-20 20:59:14,903 | INFO     | ready for new job
[2025-11-20 12:59:46] 2025-11-20 20:59:14,904 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-20 12:59:46] 2025-11-20 20:59:14,905 | INFO     | ***************************************
[2025-11-20 12:59:46] 2025-11-20 20:59:14,905 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-20 12:59:46] 2025-11-20 20:59:14,905 | INFO     | ***************************************
[2025-11-20 12:59:46] 2025-11-20 20:59:14,905 | INFO     | 
[2025-11-20 12:59:46] 2025-11-20 20:59:14,906 | INFO     | architecture information:
[2025-11-20 12:59:46] 2025-11-20 20:59:14,907 | INFO     | executing command: cat /etc/os-release
[2025-11-20 12:59:46] 2025-11-20 20:59:14,919 | INFO     | cat /etc/os-release:
[2025-11-20 12:59:46] NAME="CentOS Linux"
[2025-11-20 12:59:46] VERSION="7 (Core)"
[2025-11-20 12:59:46] ID="centos"
[2025-11-20 12:59:46] ID_LIKE="rhel fedora"
[2025-11-20 12:59:46] VERSION_ID="7"
[2025-11-20 12:59:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-20 12:59:46] ANSI_COLOR="0;31"
[2025-11-20 12:59:46] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-20 12:59:46] HOME_URL="https://www.centos.org/"
[2025-11-20 12:59:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-20 12:59:46] 
[2025-11-20 12:59:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-20 12:59:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-20 12:59:46] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-20 12:59:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-20 12:59:46] 
[2025-11-20 12:59:46] 2025-11-20 20:59:14,919 | INFO     | ***************************************
[2025-11-20 12:59:46] 2025-11-20 20:59:15,423 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-20 12:59:46] 2025-11-20 20:59:15,541 | INFO     | sufficient remaining disk space (1003477794816 B)
[2025-11-20 12:59:46] 2025-11-20 20:59:15,542 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-20 12:59:46] 2025-11-20 20:59:15,542 | INFO     | current server update state: UPDATING_FINAL
[2025-11-20 12:59:46] 2025-11-20 20:59:15,542 | INFO     | update_server=False
[2025-11-20 12:59:46] 2025-11-20 20:59:15,542 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-20 12:59:46] 2025-11-20 20:59:15,545 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-20 12:59:46] 2025-11-20 20:59:15,545 | INFO     | aborting loop
[2025-11-20 12:59:46] 2025-11-20 20:59:15,908 | INFO     | all job control threads have been joined
[2025-11-20 12:59:46] 2025-11-20 20:59:16,324 | INFO     | all payload control threads have been joined
[2025-11-20 12:59:46] 2025-11-20 20:59:16,513 | INFO     | all data control threads have been joined
[2025-11-20 12:59:46] 2025-11-20 20:59:16,547 | INFO     | [job] retrieve thread has finished
[2025-11-20 12:59:46] 2025-11-20 20:59:16,551 | INFO     | [job] job monitor thread has finished
[2025-11-20 12:59:46] 2025-11-20 20:59:16,553 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-20 12:59:46] 2025-11-20 20:59:16,671 | INFO     | [payload] validate_pre thread has finished
[2025-11-20 12:59:46] 2025-11-20 20:59:16,914 | INFO     | [job] control thread has finished
[2025-11-20 12:59:46] 2025-11-20 20:59:17,042 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-20 12:59:46] 2025-11-20 20:59:17,048 | INFO     | [payload] validate_post thread has finished
[2025-11-20 12:59:46] 2025-11-20 20:59:17,090 | INFO     | [payload] failed_post thread has finished
[2025-11-20 12:59:46] 2025-11-20 20:59:17,168 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-20 12:59:46] 2025-11-20 20:59:17,329 | INFO     | [payload] control thread has finished
[2025-11-20 12:59:46] 2025-11-20 20:59:17,519 | INFO     | [data] control thread has finished
[2025-11-20 12:59:46] 2025-11-20 20:59:17,529 | INFO     | [data] copytool_in thread has finished
[2025-11-20 12:59:46] 2025-11-20 20:59:17,622 | INFO     | [job] validate thread has finished
[2025-11-20 12:59:46] 2025-11-20 20:59:17,775 | INFO     | [job] create_data_payload thread has finished
[2025-11-20 12:59:46] 2025-11-20 20:59:17,844 | INFO     | [payload] execute_payloads thread has finished
[2025-11-20 12:59:46] 2025-11-20 20:59:18,239 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-20 12:59:46] 2025-11-20 20:59:19,051 | INFO     | [data] copytool_out thread has finished
[2025-11-20 12:59:46] 2025-11-20 20:59:19,244 | INFO     | [job] queue monitor thread has finished
[2025-11-20 12:59:46] 2025-11-20 20:59:20,564 | INFO     | [data] queue_monitor thread has finished
[2025-11-20 12:59:46] 2025-11-20 20:59:23,973 | INFO     | [monitor] cgroup control has ended
[2025-11-20 12:59:46] 2025-11-20 20:59:24,564 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139989839058752)>', '<ExcThread(monitor, started 139989450991360)>']
[2025-11-20 12:59:46] 2025-11-20 20:59:29,591 | INFO     | all workflow threads have been joined
[2025-11-20 12:59:46] 2025-11-20 20:59:29,591 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-20 12:59:46] 2025-11-20 20:59:29,591 | INFO     | traces error code: 0
[2025-11-20 12:59:46] 2025-11-20 20:59:29,592 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-20 12:59:46] 2025-11-20 20:59:45,605 | INFO     | PID=23983 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-20 12:59:46] 2025-11-20 20:59:45,607 | INFO     | .. there are 26 such processes running
[2025-11-20 12:59:46] 2025-11-20 20:59:45,608 | INFO     | found 0 job(s) in 20 queues
[2025-11-20 12:59:46] 2025-11-20 20:59:45,608 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-20 12:59:46] 2025-11-20 20:59:45,608 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-20 12:59:46] 2025-11-20 20:59:45,608 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-20 12:59:46] 2025-11-20 20:59:45,608 | INFO     | [monitor] control thread has ended
[2025-11-20 12:59:46] 2025-11-20 20:59:45,892 [wrapper] ==== pilot stdout END ====
[2025-11-20 12:59:46] 2025-11-20 20:59:45,894 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-20 12:59:46] 2025-11-20 20:59:45,896 [wrapper] pilotpid: 23983
[2025-11-20 12:59:46] 2025-11-20 20:59:45,898 [wrapper] Pilot exit status: 0
[2025-11-20 12:59:46] 2025-11-20 20:59:45,911 [wrapper] pandaids: 6893874098
[2025-11-20 12:59:46] 2025-11-20 20:59:45,955 [wrapper] cleanup supervisor_pilot   23989 23984
[2025-11-20 12:59:46] 2025-11-20 20:59:45,957 [wrapper] Test setup, not cleaning
[2025-11-20 12:59:46] 2025-11-20 20:59:45,959 [wrapper] apfmon messages muted
[2025-11-20 12:59:46] 2025-11-20 20:59:45,962 [wrapper] ==== wrapper stdout END ====
[2025-11-20 12:59:46] 2025-11-20 20:59:45,964 [wrapper] ==== wrapper stderr END ====
[2025-11-20 12:59:46]  *** Error codes and diagnostics ***
[2025-11-20 12:59:46]     "exeErrorCode": 65,
[2025-11-20 12:59:46]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-20 12:59:46]     "pilotErrorCode": 1305,
[2025-11-20 12:59:46]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-20 12:59:46]  *** Listing of results directory ***
[2025-11-20 12:59:46] total 405316
[2025-11-20 12:59:46] -rw-r--r--. 1 boinc boinc    576529 Nov 20 07:07 pilot3.tar.gz
[2025-11-20 12:59:46] -rwx------. 1 boinc boinc     36292 Nov 20 07:33 runpilot2-wrapper.sh
[2025-11-20 12:59:46] -rw-r--r--. 1 boinc boinc      5112 Nov 20 07:33 queuedata.json
[2025-11-20 12:59:46] -rw-r--r--. 1 boinc boinc       100 Nov 20 12:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-20 12:59:46] -rwxr-xr-x. 1 boinc boinc      7986 Nov 20 12:53 run_atlas
[2025-11-20 12:59:46] -rw-r--r--. 1 boinc boinc       105 Nov 20 12:53 job.xml
[2025-11-20 12:59:46] -rw-r--r--. 1 boinc boinc      6445 Nov 20 12:53 init_data.xml
[2025-11-20 12:59:46] -rw-r--r--. 2 boinc boinc 410819673 Nov 20 12:53 EVNT.47493127._000699.pool.root.1
[2025-11-20 12:59:46] -rw-r--r--. 2 boinc boinc     15847 Nov 20 12:54 start_atlas.sh
[2025-11-20 12:59:46] drwxrwx--x. 2 boinc boinc      4096 Nov 20 12:54 shared
[2025-11-20 12:59:46] -rw-r--r--. 2 boinc boinc    590092 Nov 20 12:54 input.tar.gz
[2025-11-20 12:59:46] -rw-r--r--. 1 boinc boinc         0 Nov 20 12:54 boinc_lockfile
[2025-11-20 12:59:46] -rw-r--r--. 1 boinc boinc      2785 Nov 20 12:54 pandaJob.out
[2025-11-20 12:59:46] -rw-------. 1 boinc boinc    989464 Nov 20 12:54 agis_schedconf.cvmfs.json
[2025-11-20 12:59:46] -rw-------. 1 boinc boinc   1526164 Nov 20 12:54 agis_ddmendpoints.agis.ALL.json
[2025-11-20 12:59:46] drwx------. 5 boinc boinc      4096 Nov 20 12:54 pilot3
[2025-11-20 12:59:46] -rw-r--r--. 1 boinc boinc       524 Nov 20 12:56 boinc_task_state.xml
[2025-11-20 12:59:46] -rw-------. 1 boinc boinc       997 Nov 20 12:57 memory_monitor_summary.json
[2025-11-20 12:59:46] -rw-------. 1 boinc boinc     49452 Nov 20 12:57 log.47523449._006982.job.log.tgz.1
[2025-11-20 12:59:46] -rw-------. 1 boinc boinc     10334 Nov 20 12:59 heartbeat.json
[2025-11-20 12:59:46] -rw-r--r--. 1 boinc boinc      8192 Nov 20 12:59 boinc_mmap_file
[2025-11-20 12:59:46] -rw-r--r--. 1 boinc boinc        23 Nov 20 12:59 wrapper_checkpoint.txt
[2025-11-20 12:59:46] -rw-------. 1 boinc boinc        95 Nov 20 12:59 pilot_heartbeat.json
[2025-11-20 12:59:46] -rw-------. 1 boinc boinc       821 Nov 20 12:59 pilotlog.txt
[2025-11-20 12:59:46] -rw-------. 1 boinc boinc    103565 Nov 20 12:59 log.47523449._006982.job.log.1
[2025-11-20 12:59:46] -rw-------. 1 boinc boinc       186 Nov 20 12:59 output.list
[2025-11-20 12:59:46] -rw-r--r--. 1 boinc boinc       620 Nov 20 12:59 runtime_log
[2025-11-20 12:59:46] -rw-------. 1 boinc boinc    174080 Nov 20 12:59 result.tar.gz
[2025-11-20 12:59:46] -rw-r--r--. 1 boinc boinc      8634 Nov 20 12:59 runtime_log.err
[2025-11-20 12:59:46] -rw-------. 1 boinc boinc       646 Nov 20 12:59 iIPLDmlpLg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmnEIKDmsvBq6n.diag
[2025-11-20 12:59:46] -rw-r--r--. 1 boinc boinc     22442 Nov 20 12:59 stderr.txt
[2025-11-20 12:59:46] No HITS result produced
[2025-11-20 12:59:46]  *** Contents of shared directory: ***
[2025-11-20 12:59:46] total 401964
[2025-11-20 12:59:46] -rw-r--r--. 2 boinc boinc 410819673 Nov 20 12:53 ATLAS.root_0
[2025-11-20 12:59:46] -rw-r--r--. 2 boinc boinc     15847 Nov 20 12:54 start_atlas.sh
[2025-11-20 12:59:46] -rw-r--r--. 2 boinc boinc    590092 Nov 20 12:54 input.tar.gz
[2025-11-20 12:59:46] -rw-------. 1 boinc boinc    174080 Nov 20 12:59 result.tar.gz
12:59:47 (20255): run_atlas exited; CPU time 53.443946
12:59:47 (20255): called boinc_finish(0)

</stderr_txt>
]]>

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