Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:37:34 (3158544): wrapper (7.7.26015): starting
11:37:34 (3158544): wrapper: running run_atlas (--nthreads 4)
[2025-11-24 11:37:34] Arguments: --nthreads 4
[2025-11-24 11:37:34] Threads: 4
[2025-11-24 11:37:34] Checking for CVMFS
[2025-11-24 11:37:34] No cvmfs_config command found, will try listing directly
[2025-11-24 11:37:34] CVMFS is ok
[2025-11-24 11:37:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-24 11:37:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-24 11:37:34] Further information can be found at the LHC@home message board.
[2025-11-24 11:37:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-24 11:37:34] Checking for apptainer binary...
[2025-11-24 11:37:34] which: no apptainer in ((null))
[2025-11-24 11:37:34] apptainer is not installed, using version from CVMFS
[2025-11-24 11:37:34] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-24 11:37:34] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot112/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut13.grid.cesnet.cz
[2025-11-24 11:37:34] apptainer works
[2025-11-24 11:37:34] Set ATHENA_PROC_NUMBER=4
[2025-11-24 11:37:34] Set ATHENA_CORE_NUMBER=4
[2025-11-24 11:37:34] Starting ATLAS job with PandaID=6893853433
[2025-11-24 11:37:34] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot112/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-25 04:12:03]  *** The last 200 lines of the pilot log: ***
[2025-11-25 04:12:03] 2025-11-25 03:00:50,327 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-25 04:12:03] 2025-11-25 03:00:50,351 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2714.809171875
[2025-11-25 04:12:03] 2025-11-25 03:00:50,377 | INFO     | using path: /scratch/boinc/var/slot112/slots/0/PanDA_Pilot-6893853433/memory_monitor_summary.json (trf name=prmon)
[2025-11-25 04:12:03] 2025-11-25 03:00:50,378 | INFO     | extracted standard info from prmon json
[2025-11-25 04:12:03] 2025-11-25 03:00:50,378 | INFO     | extracted standard memory fields from prmon json
[2025-11-25 04:12:03] 2025-11-25 03:00:50,378 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-25 04:12:03] 2025-11-25 03:00:50,395 | INFO     | fitting pss+swap vs Time
[2025-11-25 04:12:03] 2025-11-25 03:00:50,397 | INFO     | sum of square deviations: 280386682268.0
[2025-11-25 04:12:03] 2025-11-25 03:00:50,418 | INFO     | sum of deviations: 572227141349.0
[2025-11-25 04:12:03] 2025-11-25 03:00:50,418 | INFO     | mean x: 1764010168.0
[2025-11-25 04:12:03] 2025-11-25 03:00:50,418 | INFO     | mean y: 2275292.943123061
[2025-11-25 04:12:03] 2025-11-25 03:00:50,418 | INFO     | intersect: -3597804737.8922496
[2025-11-25 04:12:03] 2025-11-25 03:00:50,419 | INFO     | chi2: 4.407835655341007
[2025-11-25 04:12:03] 2025-11-25 03:00:50,421 | INFO     | sum of square deviations: 276059801140.5
[2025-11-25 04:12:03] 2025-11-25 03:00:50,441 | INFO     | sum of deviations: 786654621979.4998
[2025-11-25 04:12:03] 2025-11-25 03:00:50,441 | INFO     | mean x: 1764010015.5
[2025-11-25 04:12:03] 2025-11-25 03:00:50,441 | INFO     | mean y: 2282844.791060291
[2025-11-25 04:12:03] 2025-11-25 03:00:50,441 | INFO     | intersect: -5024405670.444645
[2025-11-25 04:12:03] 2025-11-25 03:00:50,442 | INFO     | chi2: 2.0003770477298057
[2025-11-25 04:12:03] 2025-11-25 03:00:50,442 | INFO     | current chi2=2.0003770477298057 (change=54.617703468459986 %)
[2025-11-25 04:12:03] 2025-11-25 03:00:50,443 | INFO     | sum of square deviations: 271777665038.0
[2025-11-25 04:12:03] 2025-11-25 03:00:50,463 | INFO     | sum of deviations: 825199133710.9999
[2025-11-25 04:12:03] 2025-11-25 03:00:50,463 | INFO     | mean x: 1764009863.0
[2025-11-25 04:12:03] 2025-11-25 03:00:50,463 | INFO     | mean y: 2284213.984326019
[2025-11-25 04:12:03] 2025-11-25 03:00:50,463 | INFO     | intersect: -5353782888.151271
[2025-11-25 04:12:03] 2025-11-25 03:00:50,464 | INFO     | chi2: 1.8470955011357721
[2025-11-25 04:12:03] 2025-11-25 03:00:50,465 | INFO     | current chi2=1.8470955011357721 (change=7.662632740562097 %)
[2025-11-25 04:12:03] 2025-11-25 03:00:50,465 | INFO     | right removable region: 956
[2025-11-25 04:12:03] 2025-11-25 03:00:50,466 | INFO     | sum of square deviations: 276059801140.5
[2025-11-25 04:12:03] 2025-11-25 03:00:50,486 | INFO     | sum of deviations: 412449983143.50024
[2025-11-25 04:12:03] 2025-11-25 03:00:50,486 | INFO     | mean x: 1764010320.5
[2025-11-25 04:12:03] 2025-11-25 03:00:50,486 | INFO     | mean y: 2280912.1528066527
[2025-11-25 04:12:03] 2025-11-25 03:00:50,486 | INFO     | intersect: -2633256837.0933876
[2025-11-25 04:12:03] 2025-11-25 03:00:50,487 | INFO     | chi2: 2.670521946340072
[2025-11-25 04:12:03] 2025-11-25 03:00:50,487 | INFO     | current chi2=2.670521946340072 (change=39.414212435434585 %)
[2025-11-25 04:12:03] 2025-11-25 03:00:50,488 | INFO     | sum of square deviations: 271777665038.0
[2025-11-25 04:12:03] 2025-11-25 03:00:50,508 | INFO     | sum of deviations: 400127542143.99854
[2025-11-25 04:12:03] 2025-11-25 03:00:50,509 | INFO     | mean x: 1764010473.0
[2025-11-25 04:12:03] 2025-11-25 03:00:50,509 | INFO     | mean y: 2281350.449320794
[2025-11-25 04:12:03] 2025-11-25 03:00:50,509 | INFO     | intersect: -2594801727.6581945
[2025-11-25 04:12:03] 2025-11-25 03:00:50,510 | INFO     | chi2: 2.6683773734025453
[2025-11-25 04:12:03] 2025-11-25 03:00:50,510 | INFO     | current chi2=2.6683773734025453 (change=0.08030538526245021 %)
[2025-11-25 04:12:03] 2025-11-25 03:00:50,510 | INFO     | left removable region: 20
[2025-11-25 04:12:03] 2025-11-25 03:00:50,511 | INFO     | sum of square deviations: 254276060610.0
[2025-11-25 04:12:03] 2025-11-25 03:00:50,530 | INFO     | sum of deviations: 642561000869.4998
[2025-11-25 04:12:03] 2025-11-25 03:00:50,530 | INFO     | mean x: 1764010442.5
[2025-11-25 04:12:03] 2025-11-25 03:00:50,530 | INFO     | mean y: 2290606.5416666665
[2025-11-25 04:12:03] 2025-11-25 03:00:50,530 | INFO     | intersect: -4455401213.749465
[2025-11-25 04:12:03] 2025-11-25 03:00:50,531 | INFO     | chi2: 0.0893651024859726
[2025-11-25 04:12:03] 2025-11-25 03:00:50,532 | INFO     | current memory leak: 2.53 B/s (using 936 data points, chi2=0.09)
[2025-11-25 04:12:03] 2025-11-25 03:00:50,533 | INFO     | could have reported an average CPU frequency of 2675 MHz (36 samples)
[2025-11-25 04:12:03] 2025-11-25 03:00:50,533 | INFO     | ..............................
[2025-11-25 04:12:03] 2025-11-25 03:00:50,533 | INFO     | . Timing measurements:
[2025-11-25 04:12:03] 2025-11-25 03:00:50,533 | INFO     | . get job = 0 s
[2025-11-25 04:12:03] 2025-11-25 03:00:50,534 | INFO     | . initial setup = 1 s
[2025-11-25 04:12:03] 2025-11-25 03:00:50,534 | INFO     | . payload setup = 9 s
[2025-11-25 04:12:03] 2025-11-25 03:00:50,534 | INFO     | . stage-in = 0 s
[2025-11-25 04:12:03] 2025-11-25 03:00:50,534 | INFO     | . payload execution = 58934 s
[2025-11-25 04:12:03] 2025-11-25 03:00:50,534 | INFO     | . stage-out = 2 s
[2025-11-25 04:12:03] 2025-11-25 03:00:50,534 | INFO     | . log creation = 0 s
[2025-11-25 04:12:03] 2025-11-25 03:00:50,534 | INFO     | ..............................
[2025-11-25 04:12:03] 2025-11-25 03:00:50,669 | INFO     | 
[2025-11-25 04:12:03] 2025-11-25 03:00:50,670 | INFO     | job summary report
[2025-11-25 04:12:03] 2025-11-25 03:00:50,670 | INFO     | --------------------------------------------------
[2025-11-25 04:12:03] 2025-11-25 03:00:50,670 | INFO     | PanDA job id: 6893853433
[2025-11-25 04:12:03] 2025-11-25 03:00:50,670 | INFO     | task id: 47523449
[2025-11-25 04:12:03] 2025-11-25 03:00:50,670 | INFO     | errors: (none)
[2025-11-25 04:12:03] 2025-11-25 03:00:50,670 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-25 04:12:03] 2025-11-25 03:00:50,670 | INFO     | pilot state: finished 
[2025-11-25 04:12:03] 2025-11-25 03:00:50,670 | INFO     | transexitcode: 0
[2025-11-25 04:12:03] 2025-11-25 03:00:50,670 | INFO     | exeerrorcode: 0
[2025-11-25 04:12:03] 2025-11-25 03:00:50,671 | INFO     | exeerrordiag: 
[2025-11-25 04:12:03] 2025-11-25 03:00:50,671 | INFO     | exitcode: 0
[2025-11-25 04:12:03] 2025-11-25 03:00:50,671 | INFO     | exitmsg: OK
[2025-11-25 04:12:03] 2025-11-25 03:00:50,671 | INFO     | cpuconsumptiontime: 232490 s
[2025-11-25 04:12:03] 2025-11-25 03:00:50,671 | INFO     | nevents: 1000
[2025-11-25 04:12:03] 2025-11-25 03:00:50,671 | INFO     | neventsw: 0
[2025-11-25 04:12:03] 2025-11-25 03:00:50,671 | INFO     | pid: 3170073
[2025-11-25 04:12:03] 2025-11-25 03:00:50,671 | INFO     | pgrp: 3170073
[2025-11-25 04:12:03] 2025-11-25 03:00:50,671 | INFO     | corecount: 4
[2025-11-25 04:12:03] 2025-11-25 03:00:50,671 | INFO     | event service: False
[2025-11-25 04:12:03] 2025-11-25 03:00:50,671 | INFO     | sizes: {0: 2298819, 7: 2299081, 11: 2299109, 58947: 2352666, 58948: 2352665, 58951: 2362530, 58953: 2362714, 58963: 2362960}
[2025-11-25 04:12:03] 2025-11-25 03:00:50,671 | INFO     | --------------------------------------------------
[2025-11-25 04:12:03] 2025-11-25 03:00:50,672 | INFO     | 
[2025-11-25 04:12:03] 2025-11-25 03:00:50,672 | INFO     | executing command: ls -lF /scratch/boinc/var/slot112/slots/0
[2025-11-25 04:12:03] 2025-11-25 03:00:50,700 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-25 04:12:03] 2025-11-25 03:00:50,700 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-25 04:12:03] 2025-11-25 03:00:50,701 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-25 04:12:03] 2025-11-25 03:00:50,701 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-25 04:12:03] 2025-11-25 03:00:50,701 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-25 04:12:03] 2025-11-25 03:00:50,701 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-25 04:12:03] 2025-11-25 03:00:50,701 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-25 04:12:03] 2025-11-25 03:00:50,701 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-25 04:12:03] 2025-11-25 03:00:50,701 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-25 04:12:03] 2025-11-25 03:00:50,701 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-25 04:12:03] 2025-11-25 03:00:50,701 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-25 04:12:03] 2025-11-25 03:00:50,701 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-25 04:12:03] 2025-11-25 03:00:50,702 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-25 04:12:03] 2025-11-25 03:00:50,702 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-25 04:12:03] 2025-11-25 03:00:50,702 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-25 04:12:03] 2025-11-25 03:00:50,702 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-25 04:12:03] 2025-11-25 03:00:50,702 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-25 04:12:03] 2025-11-25 03:00:50,702 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-25 04:12:03] 2025-11-25 03:00:50,702 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-25 04:12:03] 2025-11-25 03:00:50,702 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-25 04:12:03] 2025-11-25 03:00:50,702 | INFO     | job 6893853433 has completed (purged errors)
[2025-11-25 04:12:03] 2025-11-25 03:00:50,703 | INFO     | overall cleanup function is called
[2025-11-25 04:12:03] 2025-11-25 03:00:51,718 | INFO     | --- collectZombieJob: --- 10, [3170073]
[2025-11-25 04:12:03] 2025-11-25 03:00:51,719 | INFO     | zombie collector waiting for pid 3170073
[2025-11-25 04:12:03] 2025-11-25 03:00:51,719 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-25 04:12:03] 2025-11-25 03:00:51,719 | INFO     | collected zombie processes
[2025-11-25 04:12:03] 2025-11-25 03:00:51,719 | INFO     | will attempt to kill all subprocesses of pid=3170073
[2025-11-25 04:12:03] 2025-11-25 03:00:52,300 | INFO     | process IDs to be killed: [3170073] (in reverse order)
[2025-11-25 04:12:03] 2025-11-25 03:00:52,565 | WARNING  | found no corresponding commands to process id(s)
[2025-11-25 04:12:03] 2025-11-25 03:00:52,565 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-25 04:12:03] 2025-11-25 03:00:52,598 | INFO     | did not find any defunct processes belonging to 3170073
[2025-11-25 04:12:03] 2025-11-25 03:00:52,632 | INFO     | did not find any defunct processes belonging to 3170073
[2025-11-25 04:12:03] 2025-11-25 03:00:52,633 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-25 04:12:03] 2025-11-25 03:00:52,634 | INFO     | ready for new job
[2025-11-25 04:12:03] 2025-11-25 03:00:52,634 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-25 04:12:03] 2025-11-25 03:00:52,640 | INFO     | ***************************************
[2025-11-25 04:12:03] 2025-11-25 03:00:52,640 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-25 04:12:03] 2025-11-25 03:00:52,640 | INFO     | ***************************************
[2025-11-25 04:12:03] 2025-11-25 03:00:52,640 | INFO     | 
[2025-11-25 04:12:03] 2025-11-25 03:00:52,649 | INFO     | architecture information:
[2025-11-25 04:12:03] 2025-11-25 03:00:52,650 | INFO     | executing command: cat /etc/os-release
[2025-11-25 04:12:03] 2025-11-25 03:00:52,671 | INFO     | cat /etc/os-release:
[2025-11-25 04:12:03] NAME="CentOS Linux"
[2025-11-25 04:12:03] VERSION="7 (Core)"
[2025-11-25 04:12:03] ID="centos"
[2025-11-25 04:12:03] ID_LIKE="rhel fedora"
[2025-11-25 04:12:03] VERSION_ID="7"
[2025-11-25 04:12:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-25 04:12:03] ANSI_COLOR="0;31"
[2025-11-25 04:12:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-25 04:12:03] HOME_URL="https://www.centos.org/"
[2025-11-25 04:12:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-25 04:12:03] 
[2025-11-25 04:12:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-25 04:12:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-25 04:12:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-25 04:12:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-25 04:12:03] 
[2025-11-25 04:12:03] 2025-11-25 03:00:52,671 | INFO     | ***************************************
[2025-11-25 04:12:03] 2025-11-25 03:00:53,174 | INFO     | executing command: df -mP /scratch/boinc/var/slot112/slots/0
[2025-11-25 04:12:03] 2025-11-25 03:00:53,196 | INFO     | sufficient remaining disk space (3283730038784 B)
[2025-11-25 04:12:03] 2025-11-25 03:00:53,196 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-25 04:12:03] 2025-11-25 03:00:53,196 | INFO     | current server update state: UPDATING_FINAL
[2025-11-25 04:12:03] 2025-11-25 03:00:53,196 | INFO     | update_server=False
[2025-11-25 04:12:03] 2025-11-25 03:00:53,196 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-25 04:12:03] 2025-11-25 03:00:53,404 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-25 04:12:03] 2025-11-25 03:00:53,405 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-25 04:12:03] 2025-11-25 03:00:53,405 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-25 04:12:03] 2025-11-25 03:00:53,405 | INFO     | will abort loop
[2025-11-25 04:12:03] 2025-11-25 03:00:53,821 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-25 04:12:03] 2025-11-25 03:00:54,202 | INFO     | [job] retrieve thread has finished
[2025-11-25 04:12:03] 2025-11-25 03:00:54,224 | INFO     | all data control threads have been joined
[2025-11-25 04:12:03] 2025-11-25 03:00:54,243 | INFO     | [payload] execute_payloads thread has finished
[2025-11-25 04:12:03] 2025-11-25 03:00:54,248 | INFO     | all payload control threads have been joined
[2025-11-25 04:12:03] 2025-11-25 03:00:54,253 | INFO     | [payload] validate_post thread has finished
[2025-11-25 04:12:03] 2025-11-25 03:00:54,357 | INFO     | [data] copytool_in thread has finished
[2025-11-25 04:12:03] 2025-11-25 03:00:54,409 | INFO     | [job] job monitor thread has finished
[2025-11-25 04:12:03] 2025-11-25 03:00:54,466 | INFO     | [payload] validate_pre thread has finished
[2025-11-25 04:12:03] 2025-11-25 03:00:54,649 | INFO     | all job control threads have been joined
[2025-11-25 04:12:03] 2025-11-25 03:00:54,822 | INFO     | [payload] failed_post thread has finished
[2025-11-25 04:12:03] 2025-11-25 03:00:54,982 | INFO     | [job] create_data_payload thread has finished
[2025-11-25 04:12:03] 2025-11-25 03:00:55,054 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-25 04:12:03] 2025-11-25 03:00:55,229 | INFO     | [data] control thread has finished
[2025-11-25 04:12:03] 2025-11-25 03:00:55,253 | INFO     | [payload] control thread has finished
[2025-11-25 04:12:03] 2025-11-25 03:00:55,436 | INFO     | [job] validate thread has finished
[2025-11-25 04:12:03] 2025-11-25 03:00:55,639 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-25 04:12:03] 2025-11-25 03:00:55,654 | INFO     | [job] control thread has finished
[2025-11-25 04:12:03] 2025-11-25 03:00:55,826 | INFO     | [data] copytool_out thread has finished
[2025-11-25 04:12:03] 2025-11-25 03:00:56,293 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-25 04:12:03] 2025-11-25 03:00:56,644 | INFO     | [job] queue monitor thread has finished
[2025-11-25 04:12:03] 2025-11-25 03:01:00,299 | INFO     | [data] queue_monitor thread has finished
[2025-11-25 04:12:03] 2025-11-25 03:01:22,880 | INFO     | PID=3162681 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-25 04:12:03] 2025-11-25 03:01:22,883 | INFO     | .. there are 8 such processes running
[2025-11-25 04:12:03] 2025-11-25 03:01:22,884 | INFO     | found 0 job(s) in 20 queues
[2025-11-25 04:12:03] 2025-11-25 03:01:22,884 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-25 04:12:03] 2025-11-25 03:01:22,884 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-25 04:12:03] 2025-11-25 03:01:25,371 | INFO     | [monitor] cgroup control has ended
[2025-11-25 04:12:03] 2025-11-25 03:01:26,399 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23433932736320)>', '<ExcThread(monitor, started 23433695954688)>']
[2025-11-25 04:12:03] 2025-11-25 03:01:26,904 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-25 04:12:03] 2025-11-25 03:01:26,905 | INFO     | [monitor] control thread has ended
[2025-11-25 04:12:03] 2025-11-25 03:01:31,424 | INFO     | all workflow threads have been joined
[2025-11-25 04:12:03] 2025-11-25 03:01:31,425 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-25 04:12:03] 2025-11-25 03:01:31,425 | INFO     | traces error code: 0
[2025-11-25 04:12:03] 2025-11-25 03:01:31,425 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-25 04:12:03] 2025-11-25 03:01:31,592 [wrapper] ==== pilot stdout END ====
[2025-11-25 04:12:03] 2025-11-25 03:01:31,595 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-25 04:12:03] 2025-11-25 03:01:31,600 [wrapper] pilotpid: 3162681
[2025-11-25 04:12:03] 2025-11-25 03:01:31,604 [wrapper] Pilot exit status: 0
[2025-11-25 04:12:03] 2025-11-25 03:01:31,616 [wrapper] pandaids: 6893853433
[2025-11-25 04:12:03] 2025-11-25 03:01:31,798 [wrapper] cleanup supervisor_pilot  493479 3162682
[2025-11-25 04:12:03] ./runpilot2-wrapper.sh: line 615: 493479 Terminated              sleep 900
[2025-11-25 04:12:03] 2025-11-25 03:01:31,804 [wrapper] Test setup, not cleaning
[2025-11-25 04:12:03] 2025-11-25 03:01:31,808 [wrapper] apfmon messages muted
[2025-11-25 04:12:03] 2025-11-25 03:01:31,812 [wrapper] ==== wrapper stdout END ====
[2025-11-25 04:12:03] 2025-11-25 03:01:31,816 [wrapper] ==== wrapper stderr END ====
[2025-11-25 04:12:03]  *** Error codes and diagnostics ***
[2025-11-25 04:12:03]     "exeErrorCode": 0,
[2025-11-25 04:12:03]     "exeErrorDiag": "",
[2025-11-25 04:12:03]     "pilotErrorCode": 0,
[2025-11-25 04:12:03]     "pilotErrorDiag": "",
[2025-11-25 04:12:03]  *** Listing of results directory ***
[2025-11-25 04:12:03] total 1331672
[2025-11-25 04:12:03] -rw-r--r-- 1 boinc boinc    576529 Nov 20 13:07 pilot3.tar.gz
[2025-11-25 04:12:03] -rwx------ 1 boinc boinc     36292 Nov 20 13:18 runpilot2-wrapper.sh
[2025-11-25 04:12:03] -rw-r--r-- 1 boinc boinc      5112 Nov 20 13:18 queuedata.json
[2025-11-25 04:12:03] -rw-r--r-- 1 boinc boinc       100 Nov 24 11:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-25 04:12:03] -rwxr-xr-x 1 boinc boinc      7986 Nov 24 11:37 run_atlas
[2025-11-25 04:12:03] -rw-r--r-- 1 boinc boinc       105 Nov 24 11:37 job.xml
[2025-11-25 04:12:03] -rw-r--r-- 2 boinc boinc 409602656 Nov 24 11:37 EVNT.47493127._000414.pool.root.1
[2025-11-25 04:12:03] -rw-r--r-- 1 boinc boinc      6688 Nov 24 11:37 init_data.xml
[2025-11-25 04:12:03] -rw-r--r-- 2 boinc boinc     15847 Nov 24 11:37 start_atlas.sh
[2025-11-25 04:12:03] drwxrwx--x 2 boinc boinc      4096 Nov 24 11:37 shared
[2025-11-25 04:12:03] -rw-r--r-- 2 boinc boinc    590104 Nov 24 11:37 input.tar.gz
[2025-11-25 04:12:03] -rw-r--r-- 1 boinc boinc         0 Nov 24 11:37 boinc_lockfile
[2025-11-25 04:12:03] -rw-r--r-- 1 boinc boinc      2786 Nov 24 11:37 pandaJob.out
[2025-11-25 04:12:03] -rw------- 1 boinc boinc    989824 Nov 24 11:37 agis_schedconf.cvmfs.json
[2025-11-25 04:12:03] drwx------ 5 boinc boinc      4096 Nov 24 11:37 pilot3
[2025-11-25 04:12:03] -rw-r--r-- 1 boinc boinc       532 Nov 25 03:51 boinc_task_state.xml
[2025-11-25 04:12:03] -rw------- 1 boinc boinc 930503256 Nov 25 04:00 HITS.47523449._004137.pool.root.1
[2025-11-25 04:12:03] -rw------- 1 boinc boinc      1041 Nov 25 04:00 memory_monitor_summary.json
[2025-11-25 04:12:03] -rw------- 1 boinc boinc   1516227 Nov 25 04:00 agis_ddmendpoints.agis.ALL.json
[2025-11-25 04:12:03] -rw------- 1 boinc boinc   1698047 Nov 25 04:00 log.47523449._004137.job.log.tgz.1
[2025-11-25 04:12:03] -rw------- 1 boinc boinc      7922 Nov 25 04:00 heartbeat.json
[2025-11-25 04:12:03] -rw------- 1 boinc boinc        95 Nov 25 04:01 pilot_heartbeat.json
[2025-11-25 04:12:03] -rw------- 1 boinc boinc      5021 Nov 25 04:01 pilotlog.txt
[2025-11-25 04:12:03] -rw------- 1 boinc boinc   8109628 Nov 25 04:01 log.47523449._004137.job.log.1
[2025-11-25 04:12:03] -rw------- 1 boinc boinc       353 Nov 25 04:01 output.list
[2025-11-25 04:12:03] -rw-r--r-- 1 boinc boinc       620 Nov 25 04:01 runtime_log
[2025-11-25 04:12:03] -rw------- 1 boinc boinc   9830400 Nov 25 04:01 result.tar.gz
[2025-11-25 04:12:03] -rw-r--r-- 1 boinc boinc      9223 Nov 25 04:01 runtime_log.err
[2025-11-25 04:12:03] -rw------- 1 boinc boinc       670 Nov 25 04:01 EBcNDmenIg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmubGKDmXZUCNn.diag
[2025-11-25 04:12:03] -rw-r--r-- 1 boinc boinc        28 Nov 25 04:11 wrapper_checkpoint.txt
[2025-11-25 04:12:03] -rw-r--r-- 1 boinc boinc      8192 Nov 25 04:12 boinc_mmap_file
[2025-11-25 04:12:03] -rw-r--r-- 1 boinc boinc     21022 Nov 25 04:12 stderr.txt
[2025-11-25 04:12:03] HITS file was successfully produced:
[2025-11-25 04:12:03] -rw------- 1 boinc boinc 930503256 Nov 25 04:00 shared/HITS.pool.root.1
[2025-11-25 04:12:03]  *** Contents of shared directory: ***
[2025-11-25 04:12:03] total 1318904
[2025-11-25 04:12:03] -rw-r--r-- 2 boinc boinc 409602656 Nov 24 11:37 ATLAS.root_0
[2025-11-25 04:12:03] -rw-r--r-- 2 boinc boinc     15847 Nov 24 11:37 start_atlas.sh
[2025-11-25 04:12:03] -rw-r--r-- 2 boinc boinc    590104 Nov 24 11:37 input.tar.gz
[2025-11-25 04:12:03] -rw------- 1 boinc boinc 930503256 Nov 25 04:00 HITS.pool.root.1
[2025-11-25 04:12:03] -rw------- 1 boinc boinc   9830400 Nov 25 04:01 result.tar.gz
04:12:04 (3158544): run_atlas exited; CPU time 235673.451426
04:12:04 (3158544): called boinc_finish(0)

</stderr_txt>
]]>

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