Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
23:51:24 (3720406): wrapper (7.7.26015): starting
23:51:24 (3720406): wrapper: running run_atlas (--nthreads 4)
[2025-11-22 23:51:24] Arguments: --nthreads 4
[2025-11-22 23:51:24] Threads: 4
[2025-11-22 23:51:24] Checking for CVMFS
[2025-11-22 23:51:24] No cvmfs_config command found, will try listing directly
[2025-11-22 23:51:24] CVMFS is ok
[2025-11-22 23:51:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-22 23:51:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-22 23:51:24] Further information can be found at the LHC@home message board.
[2025-11-22 23:51:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-22 23:51:24] Checking for apptainer binary...
[2025-11-22 23:51:24] which: no apptainer in ((null))
[2025-11-22 23:51:24] apptainer is not installed, using version from CVMFS
[2025-11-22 23:51:24] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-22 23:51:24] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot108/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut16.grid.cesnet.cz
[2025-11-22 23:51:24] apptainer works
[2025-11-22 23:51:24] Set ATHENA_PROC_NUMBER=4
[2025-11-22 23:51:24] Set ATHENA_CORE_NUMBER=4
[2025-11-22 23:51:25] Starting ATLAS job with PandaID=6893853451
[2025-11-22 23:51:25] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot108/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-23 15:33:41]  *** The last 200 lines of the pilot log: ***
[2025-11-23 15:33:41] 2025-11-23 14:26:11,078 | INFO     | monitor loop #3765: job 0:6893853451 is in state 'finished'
[2025-11-23 15:33:41] 2025-11-23 14:26:11,078 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-23 15:33:41] 2025-11-23 14:26:11,885 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-23 15:33:41] 2025-11-23 14:26:11,912 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2663.676046874998
[2025-11-23 15:33:41] 2025-11-23 14:26:11,939 | INFO     | using path: /scratch/boinc/var/slot108/slots/0/PanDA_Pilot-6893853451/memory_monitor_summary.json (trf name=prmon)
[2025-11-23 15:33:41] 2025-11-23 14:26:11,940 | INFO     | extracted standard info from prmon json
[2025-11-23 15:33:41] 2025-11-23 14:26:11,940 | INFO     | extracted standard memory fields from prmon json
[2025-11-23 15:33:41] 2025-11-23 14:26:11,940 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-23 15:33:41] 2025-11-23 14:26:11,955 | INFO     | fitting pss+swap vs Time
[2025-11-23 15:33:41] 2025-11-23 14:26:11,957 | INFO     | sum of square deviations: 240672840797.81583
[2025-11-23 15:33:41] 2025-11-23 14:26:11,977 | INFO     | sum of deviations: 590296769967.4329
[2025-11-23 15:33:41] 2025-11-23 14:26:11,977 | INFO     | mean x: 1763879932.0359087
[2025-11-23 15:33:41] 2025-11-23 14:26:11,978 | INFO     | mean y: 2261480.7747551687
[2025-11-23 15:33:41] 2025-11-23 14:26:11,978 | INFO     | intersect: -4323995786.308707
[2025-11-23 15:33:41] 2025-11-23 14:26:11,979 | INFO     | chi2: 5.4801112593212356
[2025-11-23 15:33:41] 2025-11-23 14:26:11,980 | INFO     | sum of square deviations: 236765921795.3087
[2025-11-23 15:33:41] 2025-11-23 14:26:12,000 | INFO     | sum of deviations: 842030992633.6965
[2025-11-23 15:33:41] 2025-11-23 14:26:12,000 | INFO     | mean x: 1763879779.536105
[2025-11-23 15:33:41] 2025-11-23 14:26:12,000 | INFO     | mean y: 2271309.1455142233
[2025-11-23 15:33:41] 2025-11-23 14:26:12,000 | INFO     | intersect: -6270765918.455712
[2025-11-23 15:33:41] 2025-11-23 14:26:12,001 | INFO     | chi2: 2.1058504368477173
[2025-11-23 15:33:41] 2025-11-23 14:26:12,001 | INFO     | current chi2=2.1058504368477173 (change=61.57285249882779 %)
[2025-11-23 15:33:41] 2025-11-23 14:26:12,002 | INFO     | sum of square deviations: 232901515217.8013
[2025-11-23 15:33:41] 2025-11-23 14:26:12,027 | INFO     | sum of deviations: 884831251653.5815
[2025-11-23 15:33:41] 2025-11-23 14:26:12,027 | INFO     | mean x: 1763879627.0363035
[2025-11-23 15:33:41] 2025-11-23 14:26:12,027 | INFO     | mean y: 2272994.98239824
[2025-11-23 15:33:41] 2025-11-23 14:26:12,028 | INFO     | intersect: -6698996495.245005
[2025-11-23 15:33:41] 2025-11-23 14:26:12,028 | INFO     | chi2: 1.923847863949982
[2025-11-23 15:33:41] 2025-11-23 14:26:12,029 | INFO     | current chi2=1.923847863949982 (change=8.6427112634921 %)
[2025-11-23 15:33:41] 2025-11-23 14:26:12,029 | INFO     | right removable region: 908
[2025-11-23 15:33:41] 2025-11-23 14:26:12,030 | INFO     | sum of square deviations: 236765901665.30862
[2025-11-23 15:33:41] 2025-11-23 14:26:12,053 | INFO     | sum of deviations: 425938655103.2542
[2025-11-23 15:33:41] 2025-11-23 14:26:12,054 | INFO     | mean x: 1763880084.536105
[2025-11-23 15:33:41] 2025-11-23 14:26:12,054 | INFO     | mean y: 2267884.1892778995
[2025-11-23 15:33:41] 2025-11-23 14:26:12,054 | INFO     | intersect: -3170928533.396073
[2025-11-23 15:33:41] 2025-11-23 14:26:12,055 | INFO     | chi2: 3.688773996596444
[2025-11-23 15:33:41] 2025-11-23 14:26:12,055 | INFO     | current chi2=3.688773996596444 (change=32.68797252387657 %)
[2025-11-23 15:33:41] 2025-11-23 14:26:12,056 | INFO     | sum of square deviations: 232901474957.80118
[2025-11-23 15:33:41] 2025-11-23 14:26:12,076 | INFO     | sum of deviations: 399775933173.95856
[2025-11-23 15:33:41] 2025-11-23 14:26:12,076 | INFO     | mean x: 1763880237.0363035
[2025-11-23 15:33:41] 2025-11-23 14:26:12,076 | INFO     | mean y: 2268916.213421342
[2025-11-23 15:33:41] 2025-11-23 14:26:12,076 | INFO     | intersect: -3025435686.756813
[2025-11-23 15:33:41] 2025-11-23 14:26:12,077 | INFO     | chi2: 3.6730208684677232
[2025-11-23 15:33:41] 2025-11-23 14:26:12,077 | INFO     | current chi2=3.6730208684677232 (change=0.4270559308663458 %)
[2025-11-23 15:33:41] 2025-11-23 14:26:12,077 | INFO     | left removable region: 20
[2025-11-23 15:33:41] 2025-11-23 14:26:12,078 | INFO     | sum of square deviations: 217129914282.77356
[2025-11-23 15:33:41] 2025-11-23 14:26:12,101 | INFO     | sum of deviations: 645152281295.483
[2025-11-23 15:33:41] 2025-11-23 14:26:12,101 | INFO     | mean x: 1763880206.537162
[2025-11-23 15:33:41] 2025-11-23 14:26:12,101 | INFO     | mean y: 2282492.4853603602
[2025-11-23 15:33:41] 2025-11-23 14:26:12,101 | INFO     | intersect: -5238687380.037088
[2025-11-23 15:33:41] 2025-11-23 14:26:12,102 | INFO     | chi2: 0.0812962575122813
[2025-11-23 15:33:41] 2025-11-23 14:26:12,102 | INFO     | current memory leak: 2.97 B/s (using 888 data points, chi2=0.08)
[2025-11-23 15:33:41] 2025-11-23 14:26:12,104 | INFO     | could have reported an average CPU frequency of 2709 MHz (34 samples)
[2025-11-23 15:33:41] 2025-11-23 14:26:12,104 | INFO     | ..............................
[2025-11-23 15:33:41] 2025-11-23 14:26:12,104 | INFO     | . Timing measurements:
[2025-11-23 15:33:41] 2025-11-23 14:26:12,104 | INFO     | . get job = 0 s
[2025-11-23 15:33:41] 2025-11-23 14:26:12,104 | INFO     | . initial setup = 1 s
[2025-11-23 15:33:41] 2025-11-23 14:26:12,104 | INFO     | . payload setup = 9 s
[2025-11-23 15:33:41] 2025-11-23 14:26:12,104 | INFO     | . stage-in = 0 s
[2025-11-23 15:33:41] 2025-11-23 14:26:12,104 | INFO     | . payload execution = 56015 s
[2025-11-23 15:33:41] 2025-11-23 14:26:12,105 | INFO     | . stage-out = 3 s
[2025-11-23 15:33:41] 2025-11-23 14:26:12,105 | INFO     | . log creation = 1 s
[2025-11-23 15:33:41] 2025-11-23 14:26:12,105 | INFO     | ..............................
[2025-11-23 15:33:41] 2025-11-23 14:26:12,210 | INFO     | 
[2025-11-23 15:33:41] 2025-11-23 14:26:12,211 | INFO     | job summary report
[2025-11-23 15:33:41] 2025-11-23 14:26:12,211 | INFO     | --------------------------------------------------
[2025-11-23 15:33:41] 2025-11-23 14:26:12,211 | INFO     | PanDA job id: 6893853451
[2025-11-23 15:33:41] 2025-11-23 14:26:12,211 | INFO     | task id: 47523449
[2025-11-23 15:33:41] 2025-11-23 14:26:12,211 | INFO     | errors: (none)
[2025-11-23 15:33:41] 2025-11-23 14:26:12,211 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-23 15:33:41] 2025-11-23 14:26:12,211 | INFO     | pilot state: finished 
[2025-11-23 15:33:41] 2025-11-23 14:26:12,212 | INFO     | transexitcode: 0
[2025-11-23 15:33:41] 2025-11-23 14:26:12,212 | INFO     | exeerrorcode: 0
[2025-11-23 15:33:41] 2025-11-23 14:26:12,212 | INFO     | exeerrordiag: 
[2025-11-23 15:33:41] 2025-11-23 14:26:12,212 | INFO     | exitcode: 0
[2025-11-23 15:33:41] 2025-11-23 14:26:12,212 | INFO     | exitmsg: OK
[2025-11-23 15:33:41] 2025-11-23 14:26:12,212 | INFO     | cpuconsumptiontime: 218911 s
[2025-11-23 15:33:41] 2025-11-23 14:26:12,212 | INFO     | nevents: 1000
[2025-11-23 15:33:41] 2025-11-23 14:26:12,212 | INFO     | neventsw: 0
[2025-11-23 15:33:41] 2025-11-23 14:26:12,212 | INFO     | pid: 3734050
[2025-11-23 15:33:41] 2025-11-23 14:26:12,212 | INFO     | pgrp: 3734050
[2025-11-23 15:33:41] 2025-11-23 14:26:12,212 | INFO     | corecount: 4
[2025-11-23 15:33:41] 2025-11-23 14:26:12,212 | INFO     | event service: False
[2025-11-23 15:33:41] 2025-11-23 14:26:12,213 | INFO     | sizes: {0: 2297979, 1: 2298847, 8: 2299109, 12: 2299137, 56028: 2352041, 56032: 2361243, 56055: 2361433}
[2025-11-23 15:33:41] 2025-11-23 14:26:12,213 | INFO     | --------------------------------------------------
[2025-11-23 15:33:41] 2025-11-23 14:26:12,213 | INFO     | 
[2025-11-23 15:33:41] 2025-11-23 14:26:12,213 | INFO     | executing command: ls -lF /scratch/boinc/var/slot108/slots/0
[2025-11-23 15:33:41] 2025-11-23 14:26:12,242 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-23 15:33:41] 2025-11-23 14:26:12,243 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-23 15:33:41] 2025-11-23 14:26:12,243 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-23 15:33:41] 2025-11-23 14:26:12,243 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-23 15:33:41] 2025-11-23 14:26:12,243 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-23 15:33:41] 2025-11-23 14:26:12,243 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-23 15:33:41] 2025-11-23 14:26:12,243 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-23 15:33:41] 2025-11-23 14:26:12,243 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-23 15:33:41] 2025-11-23 14:26:12,243 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-23 15:33:41] 2025-11-23 14:26:12,243 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-23 15:33:41] 2025-11-23 14:26:12,243 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-23 15:33:41] 2025-11-23 14:26:12,244 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-23 15:33:41] 2025-11-23 14:26:12,244 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-23 15:33:41] 2025-11-23 14:26:12,244 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-23 15:33:41] 2025-11-23 14:26:12,244 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-23 15:33:41] 2025-11-23 14:26:12,244 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-23 15:33:41] 2025-11-23 14:26:12,244 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-23 15:33:41] 2025-11-23 14:26:12,244 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-23 15:33:41] 2025-11-23 14:26:12,244 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-23 15:33:41] 2025-11-23 14:26:12,244 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-23 15:33:41] 2025-11-23 14:26:12,245 | INFO     | job 6893853451 has completed (purged errors)
[2025-11-23 15:33:41] 2025-11-23 14:26:12,245 | INFO     | overall cleanup function is called
[2025-11-23 15:33:41] 2025-11-23 14:26:13,261 | INFO     | --- collectZombieJob: --- 10, [3734050]
[2025-11-23 15:33:41] 2025-11-23 14:26:13,261 | INFO     | zombie collector waiting for pid 3734050
[2025-11-23 15:33:41] 2025-11-23 14:26:13,261 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-23 15:33:41] 2025-11-23 14:26:13,261 | INFO     | collected zombie processes
[2025-11-23 15:33:41] 2025-11-23 14:26:13,261 | INFO     | will attempt to kill all subprocesses of pid=3734050
[2025-11-23 15:33:41] 2025-11-23 14:26:14,099 | INFO     | process IDs to be killed: [3734050] (in reverse order)
[2025-11-23 15:33:41] 2025-11-23 14:26:14,553 | WARNING  | found no corresponding commands to process id(s)
[2025-11-23 15:33:41] 2025-11-23 14:26:14,554 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-23 15:33:41] 2025-11-23 14:26:14,585 | INFO     | did not find any defunct processes belonging to 3734050
[2025-11-23 15:33:41] 2025-11-23 14:26:14,614 | INFO     | did not find any defunct processes belonging to 3734050
[2025-11-23 15:33:41] 2025-11-23 14:26:14,617 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-23 15:33:41] 2025-11-23 14:26:14,617 | INFO     | ready for new job
[2025-11-23 15:33:41] 2025-11-23 14:26:14,617 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-23 15:33:41] 2025-11-23 14:26:14,623 | INFO     | ***************************************
[2025-11-23 15:33:41] 2025-11-23 14:26:14,623 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-23 15:33:41] 2025-11-23 14:26:14,623 | INFO     | ***************************************
[2025-11-23 15:33:41] 2025-11-23 14:26:14,624 | INFO     | 
[2025-11-23 15:33:41] 2025-11-23 14:26:14,632 | INFO     | architecture information:
[2025-11-23 15:33:41] 2025-11-23 14:26:14,632 | INFO     | executing command: cat /etc/os-release
[2025-11-23 15:33:41] 2025-11-23 14:26:14,667 | INFO     | cat /etc/os-release:
[2025-11-23 15:33:41] NAME="CentOS Linux"
[2025-11-23 15:33:41] VERSION="7 (Core)"
[2025-11-23 15:33:41] ID="centos"
[2025-11-23 15:33:41] ID_LIKE="rhel fedora"
[2025-11-23 15:33:41] VERSION_ID="7"
[2025-11-23 15:33:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-23 15:33:41] ANSI_COLOR="0;31"
[2025-11-23 15:33:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-23 15:33:41] HOME_URL="https://www.centos.org/"
[2025-11-23 15:33:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-23 15:33:41] 
[2025-11-23 15:33:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-23 15:33:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-23 15:33:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-23 15:33:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-23 15:33:41] 
[2025-11-23 15:33:41] 2025-11-23 14:26:14,667 | INFO     | ***************************************
[2025-11-23 15:33:41] 2025-11-23 14:26:15,169 | INFO     | executing command: df -mP /scratch/boinc/var/slot108/slots/0
[2025-11-23 15:33:41] 2025-11-23 14:26:15,194 | INFO     | sufficient remaining disk space (3327610847232 B)
[2025-11-23 15:33:41] 2025-11-23 14:26:15,194 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-23 15:33:41] 2025-11-23 14:26:15,195 | INFO     | current server update state: UPDATING_FINAL
[2025-11-23 15:33:41] 2025-11-23 14:26:15,195 | INFO     | update_server=False
[2025-11-23 15:33:41] 2025-11-23 14:26:15,195 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-23 15:33:41] 2025-11-23 14:26:15,195 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-23 15:33:41] 2025-11-23 14:26:15,195 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-23 15:33:41] 2025-11-23 14:26:15,196 | INFO     | aborting loop
[2025-11-23 15:33:41] 2025-11-23 14:26:16,043 | INFO     | all payload control threads have been joined
[2025-11-23 15:33:41] 2025-11-23 14:26:16,121 | INFO     | all data control threads have been joined
[2025-11-23 15:33:41] 2025-11-23 14:26:16,200 | INFO     | [job] retrieve thread has finished
[2025-11-23 15:33:41] 2025-11-23 14:26:16,201 | INFO     | [job] job monitor thread has finished
[2025-11-23 15:33:41] 2025-11-23 14:26:16,344 | INFO     | all job control threads have been joined
[2025-11-23 15:33:41] 2025-11-23 14:26:16,535 | INFO     | [payload] validate_post thread has finished
[2025-11-23 15:33:41] 2025-11-23 14:26:16,725 | INFO     | [job] validate thread has finished
[2025-11-23 15:33:41] 2025-11-23 14:26:17,048 | INFO     | [payload] control thread has finished
[2025-11-23 15:33:41] 2025-11-23 14:26:17,126 | INFO     | [data] control thread has finished
[2025-11-23 15:33:41] 2025-11-23 14:26:17,190 | INFO     | [job] create_data_payload thread has finished
[2025-11-23 15:33:41] 2025-11-23 14:26:17,200 | INFO     | [data] copytool_out thread has finished
[2025-11-23 15:33:41] 2025-11-23 14:26:17,221 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-23 15:33:41] 2025-11-23 14:26:17,349 | INFO     | [job] control thread has finished
[2025-11-23 15:33:41] 2025-11-23 14:26:17,350 | INFO     | [payload] execute_payloads thread has finished
[2025-11-23 15:33:41] 2025-11-23 14:26:17,372 | INFO     | [payload] failed_post thread has finished
[2025-11-23 15:33:41] 2025-11-23 14:26:17,485 | INFO     | [data] copytool_in thread has finished
[2025-11-23 15:33:41] 2025-11-23 14:26:17,616 | INFO     | [payload] validate_pre thread has finished
[2025-11-23 15:33:41] 2025-11-23 14:26:17,631 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-23 15:33:41] 2025-11-23 14:26:18,226 | INFO     | [job] queue monitor thread has finished
[2025-11-23 15:33:41] 2025-11-23 14:26:21,637 | INFO     | [data] queue_monitor thread has finished
[2025-11-23 15:33:41] 2025-11-23 14:26:25,521 | INFO     | job.realtimelogging is not enabled
[2025-11-23 15:33:41] 2025-11-23 14:26:26,526 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-23 15:33:41] 2025-11-23 14:26:45,242 | INFO     | PID=3724385 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-23 15:33:41] 2025-11-23 14:26:45,243 | INFO     | .. there are 12 such processes running
[2025-11-23 15:33:41] 2025-11-23 14:26:45,243 | INFO     | found 0 job(s) in 20 queues
[2025-11-23 15:33:41] 2025-11-23 14:26:45,243 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-23 15:33:41] 2025-11-23 14:26:45,243 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-23 15:33:41] 2025-11-23 14:27:11,411 | INFO     | [monitor] cgroup control has ended
[2025-11-23 15:33:41] 2025-11-23 14:27:12,129 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23182875322176)>', '<ExcThread(monitor, started 23182635398912)>']
[2025-11-23 15:33:41] 2025-11-23 14:27:12,399 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-23 15:33:41] 2025-11-23 14:27:12,399 | INFO     | [monitor] control thread has ended
[2025-11-23 15:33:41] 2025-11-23 14:27:17,154 | INFO     | all workflow threads have been joined
[2025-11-23 15:33:41] 2025-11-23 14:27:17,154 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-23 15:33:41] 2025-11-23 14:27:17,155 | INFO     | traces error code: 0
[2025-11-23 15:33:41] 2025-11-23 14:27:17,155 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-23 15:33:41] 2025-11-23 14:27:17,320 [wrapper] ==== pilot stdout END ====
[2025-11-23 15:33:41] 2025-11-23 14:27:17,328 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-23 15:33:41] 2025-11-23 14:27:17,338 [wrapper] pilotpid: 3724385
[2025-11-23 15:33:41] 2025-11-23 14:27:17,349 [wrapper] Pilot exit status: 0
[2025-11-23 15:33:41] 2025-11-23 14:27:17,440 [wrapper] pandaids: 6893853451
[2025-11-23 15:33:41] 2025-11-23 14:27:17,654 [wrapper] cleanup supervisor_pilot 1166872 3724386
[2025-11-23 15:33:41] 2025-11-23 14:27:17,667 [wrapper] Test setup, not cleaning
[2025-11-23 15:33:41] 2025-11-23 14:27:17,671 [wrapper] apfmon messages muted
[2025-11-23 15:33:41] 2025-11-23 14:27:17,676 [wrapper] ==== wrapper stdout END ====
[2025-11-23 15:33:41] 2025-11-23 14:27:17,680 [wrapper] ==== wrapper stderr END ====
[2025-11-23 15:33:41]  *** Error codes and diagnostics ***
[2025-11-23 15:33:41]     "exeErrorCode": 0,
[2025-11-23 15:33:41]     "exeErrorDiag": "",
[2025-11-23 15:33:41]     "pilotErrorCode": 0,
[2025-11-23 15:33:41]     "pilotErrorDiag": "",
[2025-11-23 15:33:41]  *** Listing of results directory ***
[2025-11-23 15:33:41] total 1315460
[2025-11-23 15:33:41] -rw-r--r-- 1 boinc boinc    576529 Nov 20 13:07 pilot3.tar.gz
[2025-11-23 15:33:41] -rw-r--r-- 1 boinc boinc      5112 Nov 20 13:21 queuedata.json
[2025-11-23 15:33:41] -rwx------ 1 boinc boinc     36292 Nov 20 13:21 runpilot2-wrapper.sh
[2025-11-23 15:33:41] -rw-r--r-- 1 boinc boinc       100 Nov 22 23:51 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-23 15:33:41] -rwxr-xr-x 1 boinc boinc      7986 Nov 22 23:51 run_atlas
[2025-11-23 15:33:41] -rw-r--r-- 1 boinc boinc       105 Nov 22 23:51 job.xml
[2025-11-23 15:33:41] -rw-r--r-- 2 boinc boinc 410193797 Nov 22 23:51 EVNT.47493127._000416.pool.root.1
[2025-11-23 15:33:41] -rw-r--r-- 1 boinc boinc      6688 Nov 22 23:51 init_data.xml
[2025-11-23 15:33:41] -rw-r--r-- 2 boinc boinc     15847 Nov 22 23:51 start_atlas.sh
[2025-11-23 15:33:41] drwxrwx--x 2 boinc boinc      4096 Nov 22 23:51 shared
[2025-11-23 15:33:41] -rw-r--r-- 2 boinc boinc    590104 Nov 22 23:51 input.tar.gz
[2025-11-23 15:33:41] -rw-r--r-- 1 boinc boinc         0 Nov 22 23:51 boinc_lockfile
[2025-11-23 15:33:41] -rw-r--r-- 1 boinc boinc      2786 Nov 22 23:51 pandaJob.out
[2025-11-23 15:33:41] -rw------- 1 boinc boinc    989784 Nov 22 23:51 agis_schedconf.cvmfs.json
[2025-11-23 15:33:41] drwx------ 5 boinc boinc      4096 Nov 22 23:51 pilot3
[2025-11-23 15:33:41] -rw-r--r-- 1 boinc boinc       532 Nov 23 15:16 boinc_task_state.xml
[2025-11-23 15:33:41] -rw------- 1 boinc boinc 914161425 Nov 23 15:25 HITS.47523449._004155.pool.root.1
[2025-11-23 15:33:41] -rw------- 1 boinc boinc      1038 Nov 23 15:25 memory_monitor_summary.json
[2025-11-23 15:33:41] -rw------- 1 boinc boinc   1526164 Nov 23 15:25 agis_ddmendpoints.agis.ALL.json
[2025-11-23 15:33:41] -rw------- 1 boinc boinc   1664795 Nov 23 15:25 log.47523449._004155.job.log.tgz.1
[2025-11-23 15:33:41] -rw------- 1 boinc boinc        95 Nov 23 15:25 pilot_heartbeat.json
[2025-11-23 15:33:41] -rw------- 1 boinc boinc      8592 Nov 23 15:26 heartbeat.json
[2025-11-23 15:33:41] -rw------- 1 boinc boinc      4908 Nov 23 15:27 pilotlog.txt
[2025-11-23 15:33:41] -rw------- 1 boinc boinc   7711631 Nov 23 15:27 log.47523449._004155.job.log.1
[2025-11-23 15:33:41] -rw------- 1 boinc boinc       353 Nov 23 15:27 output.list
[2025-11-23 15:33:41] -rw-r--r-- 1 boinc boinc       620 Nov 23 15:27 runtime_log
[2025-11-23 15:33:41] -rw------- 1 boinc boinc   9400320 Nov 23 15:27 result.tar.gz
[2025-11-23 15:33:41] -rw-r--r-- 1 boinc boinc      9223 Nov 23 15:27 runtime_log.err
[2025-11-23 15:33:41] -rw------- 1 boinc boinc       670 Nov 23 15:27 0xtMDmaqIg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmKlHKDmx6SuDo.diag
[2025-11-23 15:33:41] -rw-r--r-- 1 boinc boinc      8192 Nov 23 15:33 boinc_mmap_file
[2025-11-23 15:33:41] -rw-r--r-- 1 boinc boinc        28 Nov 23 15:33 wrapper_checkpoint.txt
[2025-11-23 15:33:41] -rw-r--r-- 1 boinc boinc     21079 Nov 23 15:33 stderr.txt
[2025-11-23 15:33:41] HITS file was successfully produced:
[2025-11-23 15:33:41] -rw------- 1 boinc boinc 914161425 Nov 23 15:25 shared/HITS.pool.root.1
[2025-11-23 15:33:41]  *** Contents of shared directory: ***
[2025-11-23 15:33:41] total 1303100
[2025-11-23 15:33:41] -rw-r--r-- 2 boinc boinc 410193797 Nov 22 23:51 ATLAS.root_0
[2025-11-23 15:33:41] -rw-r--r-- 2 boinc boinc     15847 Nov 22 23:51 start_atlas.sh
[2025-11-23 15:33:41] -rw-r--r-- 2 boinc boinc    590104 Nov 22 23:51 input.tar.gz
[2025-11-23 15:33:41] -rw------- 1 boinc boinc 914161425 Nov 23 15:25 HITS.pool.root.1
[2025-11-23 15:33:41] -rw------- 1 boinc boinc   9400320 Nov 23 15:27 result.tar.gz
15:33:43 (3720406): run_atlas exited; CPU time 221546.355216
15:33:43 (3720406): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN