Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:53:24 (1582981): wrapper (7.7.26015): starting
15:53:24 (1582981): wrapper: running run_atlas (--nthreads 4)
[2025-11-21 15:53:24] Arguments: --nthreads 4
[2025-11-21 15:53:24] Threads: 4
[2025-11-21 15:53:24] Checking for CVMFS
[2025-11-21 15:53:24] No cvmfs_config command found, will try listing directly
[2025-11-21 15:53:24] CVMFS is ok
[2025-11-21 15:53:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-21 15:53:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-21 15:53:24] Further information can be found at the LHC@home message board.
[2025-11-21 15:53:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-21 15:53:24] Checking for apptainer binary...
[2025-11-21 15:53:24] which: no apptainer in ((null))
[2025-11-21 15:53:24] apptainer is not installed, using version from CVMFS
[2025-11-21 15:53:24] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-21 15:53:24] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot128/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut14.grid.cesnet.cz
[2025-11-21 15:53:24] apptainer works
[2025-11-21 15:53:24] Set ATHENA_PROC_NUMBER=4
[2025-11-21 15:53:24] Set ATHENA_CORE_NUMBER=4
[2025-11-21 15:53:24] Starting ATLAS job with PandaID=6893840308
[2025-11-21 15:53:24] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot128/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-22 08:08:14]  *** The last 200 lines of the pilot log: ***
[2025-11-22 08:08:14] 2025-11-22 07:06:35,390 | INFO     | monitor loop #3923: job 0:6893840308 is in state 'finished'
[2025-11-22 08:08:14] 2025-11-22 07:06:35,390 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-22 08:08:14] 2025-11-22 07:06:36,176 | INFO     | time since job start (58370s) is within the limit (172800.0s)
[2025-11-22 08:08:14] 2025-11-22 07:06:36,397 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-22 08:08:14] 2025-11-22 07:06:36,418 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 2644.9702031250004
[2025-11-22 08:08:14] 2025-11-22 07:06:36,443 | INFO     | using path: /scratch/boinc/var/slot128/slots/0/PanDA_Pilot-6893840308/memory_monitor_summary.json (trf name=prmon)
[2025-11-22 08:08:14] 2025-11-22 07:06:36,444 | INFO     | extracted standard info from prmon json
[2025-11-22 08:08:14] 2025-11-22 07:06:36,444 | INFO     | extracted standard memory fields from prmon json
[2025-11-22 08:08:14] 2025-11-22 07:06:36,444 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-22 08:08:14] 2025-11-22 07:06:36,460 | INFO     | fitting pss+swap vs Time
[2025-11-22 08:08:14] 2025-11-22 07:06:36,462 | INFO     | sum of square deviations: 270926227166.9486
[2025-11-22 08:08:14] 2025-11-22 07:06:36,485 | INFO     | sum of deviations: 394810090039.63635
[2025-11-22 08:08:14] 2025-11-22 07:06:36,485 | INFO     | mean x: 1763765999.507322
[2025-11-22 08:08:14] 2025-11-22 07:06:36,485 | INFO     | mean y: 2326132.623430962
[2025-11-22 08:08:14] 2025-11-22 07:06:36,485 | INFO     | intersect: -2567940394.748364
[2025-11-22 08:08:14] 2025-11-22 07:06:36,487 | INFO     | chi2: 4.051981708040155
[2025-11-22 08:08:14] 2025-11-22 07:06:36,488 | INFO     | sum of square deviations: 266697480246.9484
[2025-11-22 08:08:14] 2025-11-22 07:06:36,511 | INFO     | sum of deviations: 578189906340.99
[2025-11-22 08:08:14] 2025-11-22 07:06:36,512 | INFO     | mean x: 1763765847.0073607
[2025-11-22 08:08:14] 2025-11-22 07:06:36,512 | INFO     | mean y: 2332740.287066246
[2025-11-22 08:08:14] 2025-11-22 07:06:36,512 | INFO     | intersect: -3821443955.8569965
[2025-11-22 08:08:14] 2025-11-22 07:06:36,513 | INFO     | chi2: 2.284812430647357
[2025-11-22 08:08:14] 2025-11-22 07:06:36,513 | INFO     | current chi2=2.284812430647357 (change=43.61246927364672 %)
[2025-11-22 08:08:14] 2025-11-22 07:06:36,514 | INFO     | sum of square deviations: 262512966714.4487
[2025-11-22 08:08:14] 2025-11-22 07:06:36,535 | INFO     | sum of deviations: 574051828869.9749
[2025-11-22 08:08:14] 2025-11-22 07:06:36,535 | INFO     | mean x: 1763765694.5073996
[2025-11-22 08:08:14] 2025-11-22 07:06:36,536 | INFO     | mean y: 2332588.575052854
[2025-11-22 08:08:14] 2025-11-22 07:06:36,536 | INFO     | intersect: -3854592786.5872498
[2025-11-22 08:08:14] 2025-11-22 07:06:36,537 | INFO     | chi2: 2.278785790525145
[2025-11-22 08:08:14] 2025-11-22 07:06:36,537 | INFO     | current chi2=2.278785790525145 (change=0.26376957869160667 %)
[2025-11-22 08:08:14] 2025-11-22 07:06:36,537 | INFO     | right removable region: 945
[2025-11-22 08:08:14] 2025-11-22 07:06:36,538 | INFO     | sum of square deviations: 266697475976.9484
[2025-11-22 08:08:14] 2025-11-22 07:06:36,558 | INFO     | sum of deviations: 203658706112.4532
[2025-11-22 08:08:14] 2025-11-22 07:06:36,558 | INFO     | mean x: 1763766152.0073607
[2025-11-22 08:08:14] 2025-11-22 07:06:36,558 | INFO     | mean y: 2333014.36382755
[2025-11-22 08:08:14] 2025-11-22 07:06:36,558 | INFO     | intersect: -1344535121.852831
[2025-11-22 08:08:14] 2025-11-22 07:06:36,559 | INFO     | chi2: 1.9446786554757354
[2025-11-22 08:08:14] 2025-11-22 07:06:36,559 | INFO     | current chi2=1.9446786554757354 (change=52.006726693336205 %)
[2025-11-22 08:08:14] 2025-11-22 07:06:36,560 | INFO     | sum of square deviations: 262513132570.48282
[2025-11-22 08:08:14] 2025-11-22 07:06:36,580 | INFO     | sum of deviations: 182748507027.1131
[2025-11-22 08:08:14] 2025-11-22 07:06:36,580 | INFO     | mean x: 1763766304.5042284
[2025-11-22 08:08:14] 2025-11-22 07:06:36,580 | INFO     | mean y: 2333775.8467230443
[2025-11-22 08:08:14] 2025-11-22 07:06:36,580 | INFO     | intersect: -1225512068.4229317
[2025-11-22 08:08:14] 2025-11-22 07:06:36,581 | INFO     | chi2: 1.9309367934531323
[2025-11-22 08:08:14] 2025-11-22 07:06:36,581 | INFO     | current chi2=1.9309367934531323 (change=0.706639216916861 %)
[2025-11-22 08:08:14] 2025-11-22 07:06:36,581 | INFO     | left removable region: 20
[2025-11-22 08:08:14] 2025-11-22 07:06:36,582 | INFO     | sum of square deviations: 245416003860.99036
[2025-11-22 08:08:14] 2025-11-22 07:06:36,601 | INFO     | sum of deviations: 342294683348.35925
[2025-11-22 08:08:14] 2025-11-22 07:06:36,601 | INFO     | mean x: 1763766274.0032432
[2025-11-22 08:08:14] 2025-11-22 07:06:36,601 | INFO     | mean y: 2341000.5470270272
[2025-11-22 08:08:14] 2025-11-22 07:06:36,601 | INFO     | intersect: -2457677126.887
[2025-11-22 08:08:14] 2025-11-22 07:06:36,602 | INFO     | chi2: 0.14315459333123245
[2025-11-22 08:08:14] 2025-11-22 07:06:36,603 | INFO     | current memory leak: 1.39 B/s (using 925 data points, chi2=0.14)
[2025-11-22 08:08:14] 2025-11-22 07:06:36,603 | INFO     | could have reported an average CPU frequency of 2672 MHz (36 samples)
[2025-11-22 08:08:14] 2025-11-22 07:06:36,604 | INFO     | ..............................
[2025-11-22 08:08:14] 2025-11-22 07:06:36,604 | INFO     | . Timing measurements:
[2025-11-22 08:08:14] 2025-11-22 07:06:36,604 | INFO     | . get job = 0 s
[2025-11-22 08:08:14] 2025-11-22 07:06:36,604 | INFO     | . initial setup = 1 s
[2025-11-22 08:08:14] 2025-11-22 07:06:36,604 | INFO     | . payload setup = 11 s
[2025-11-22 08:08:14] 2025-11-22 07:06:36,604 | INFO     | . stage-in = 0 s
[2025-11-22 08:08:14] 2025-11-22 07:06:36,604 | INFO     | . payload execution = 58320 s
[2025-11-22 08:08:14] 2025-11-22 07:06:36,604 | INFO     | . stage-out = 2 s
[2025-11-22 08:08:14] 2025-11-22 07:06:36,604 | INFO     | . log creation = 0 s
[2025-11-22 08:08:14] 2025-11-22 07:06:36,604 | INFO     | ..............................
[2025-11-22 08:08:14] 2025-11-22 07:06:36,704 | INFO     | 
[2025-11-22 08:08:14] 2025-11-22 07:06:36,704 | INFO     | job summary report
[2025-11-22 08:08:14] 2025-11-22 07:06:36,704 | INFO     | --------------------------------------------------
[2025-11-22 08:08:14] 2025-11-22 07:06:36,704 | INFO     | PanDA job id: 6893840308
[2025-11-22 08:08:14] 2025-11-22 07:06:36,704 | INFO     | task id: 47523449
[2025-11-22 08:08:14] 2025-11-22 07:06:36,704 | INFO     | errors: (none)
[2025-11-22 08:08:14] 2025-11-22 07:06:36,704 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-22 08:08:14] 2025-11-22 07:06:36,704 | INFO     | pilot state: finished 
[2025-11-22 08:08:14] 2025-11-22 07:06:36,704 | INFO     | transexitcode: 0
[2025-11-22 08:08:14] 2025-11-22 07:06:36,705 | INFO     | exeerrorcode: 0
[2025-11-22 08:08:14] 2025-11-22 07:06:36,705 | INFO     | exeerrordiag: 
[2025-11-22 08:08:14] 2025-11-22 07:06:36,705 | INFO     | exitcode: 0
[2025-11-22 08:08:14] 2025-11-22 07:06:36,705 | INFO     | exitmsg: OK
[2025-11-22 08:08:14] 2025-11-22 07:06:36,705 | INFO     | cpuconsumptiontime: 230736 s
[2025-11-22 08:08:14] 2025-11-22 07:06:36,705 | INFO     | nevents: 1000
[2025-11-22 08:08:14] 2025-11-22 07:06:36,705 | INFO     | neventsw: 0
[2025-11-22 08:08:14] 2025-11-22 07:06:36,705 | INFO     | pid: 1594567
[2025-11-22 08:08:14] 2025-11-22 07:06:36,705 | INFO     | pgrp: 1594567
[2025-11-22 08:08:14] 2025-11-22 07:06:36,705 | INFO     | corecount: 4
[2025-11-22 08:08:14] 2025-11-22 07:06:36,705 | INFO     | event service: False
[2025-11-22 08:08:14] 2025-11-22 07:06:36,706 | INFO     | sizes: {0: 2298648, 1: 2298847, 11: 2299109, 12: 2299137, 58336: 2353865, 58340: 2363067, 58348: 2363257}
[2025-11-22 08:08:14] 2025-11-22 07:06:36,706 | INFO     | --------------------------------------------------
[2025-11-22 08:08:14] 2025-11-22 07:06:36,706 | INFO     | 
[2025-11-22 08:08:14] 2025-11-22 07:06:36,706 | INFO     | executing command: ls -lF /scratch/boinc/var/slot128/slots/0
[2025-11-22 08:08:14] 2025-11-22 07:06:36,737 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-22 08:08:14] 2025-11-22 07:06:36,737 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-22 08:08:14] 2025-11-22 07:06:36,737 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-22 08:08:14] 2025-11-22 07:06:36,738 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-22 08:08:14] 2025-11-22 07:06:36,738 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-22 08:08:14] 2025-11-22 07:06:36,738 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-22 08:08:14] 2025-11-22 07:06:36,738 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-22 08:08:14] 2025-11-22 07:06:36,738 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-22 08:08:14] 2025-11-22 07:06:36,738 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-22 08:08:14] 2025-11-22 07:06:36,738 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-22 08:08:14] 2025-11-22 07:06:36,738 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-22 08:08:14] 2025-11-22 07:06:36,738 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-22 08:08:14] 2025-11-22 07:06:36,738 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-22 08:08:14] 2025-11-22 07:06:36,738 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-22 08:08:14] 2025-11-22 07:06:36,738 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-22 08:08:14] 2025-11-22 07:06:36,739 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-22 08:08:14] 2025-11-22 07:06:36,739 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-22 08:08:14] 2025-11-22 07:06:36,739 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-22 08:08:14] 2025-11-22 07:06:36,739 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-22 08:08:14] 2025-11-22 07:06:36,739 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-22 08:08:14] 2025-11-22 07:06:36,739 | INFO     | job 6893840308 has completed (purged errors)
[2025-11-22 08:08:14] 2025-11-22 07:06:36,739 | INFO     | overall cleanup function is called
[2025-11-22 08:08:14] 2025-11-22 07:06:37,753 | INFO     | --- collectZombieJob: --- 10, [1594567]
[2025-11-22 08:08:14] 2025-11-22 07:06:37,753 | INFO     | zombie collector waiting for pid 1594567
[2025-11-22 08:08:14] 2025-11-22 07:06:37,754 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-22 08:08:14] 2025-11-22 07:06:37,754 | INFO     | collected zombie processes
[2025-11-22 08:08:14] 2025-11-22 07:06:37,754 | INFO     | will attempt to kill all subprocesses of pid=1594567
[2025-11-22 08:08:14] 2025-11-22 07:06:38,571 | INFO     | process IDs to be killed: [1594567] (in reverse order)
[2025-11-22 08:08:14] 2025-11-22 07:06:38,827 | WARNING  | found no corresponding commands to process id(s)
[2025-11-22 08:08:14] 2025-11-22 07:06:38,827 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-22 08:08:14] 2025-11-22 07:06:38,864 | INFO     | did not find any defunct processes belonging to 1594567
[2025-11-22 08:08:14] 2025-11-22 07:06:38,898 | INFO     | did not find any defunct processes belonging to 1594567
[2025-11-22 08:08:14] 2025-11-22 07:06:38,900 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-22 08:08:14] 2025-11-22 07:06:38,900 | INFO     | ready for new job
[2025-11-22 08:08:14] 2025-11-22 07:06:38,900 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-22 08:08:14] 2025-11-22 07:06:38,907 | INFO     | ***************************************
[2025-11-22 08:08:14] 2025-11-22 07:06:38,907 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-22 08:08:14] 2025-11-22 07:06:38,907 | INFO     | ***************************************
[2025-11-22 08:08:14] 2025-11-22 07:06:38,907 | INFO     | 
[2025-11-22 08:08:14] 2025-11-22 07:06:38,916 | INFO     | architecture information:
[2025-11-22 08:08:14] 2025-11-22 07:06:38,917 | INFO     | executing command: cat /etc/os-release
[2025-11-22 08:08:14] 2025-11-22 07:06:38,941 | INFO     | cat /etc/os-release:
[2025-11-22 08:08:14] NAME="CentOS Linux"
[2025-11-22 08:08:14] VERSION="7 (Core)"
[2025-11-22 08:08:14] ID="centos"
[2025-11-22 08:08:14] ID_LIKE="rhel fedora"
[2025-11-22 08:08:14] VERSION_ID="7"
[2025-11-22 08:08:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-22 08:08:14] ANSI_COLOR="0;31"
[2025-11-22 08:08:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-22 08:08:14] HOME_URL="https://www.centos.org/"
[2025-11-22 08:08:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-22 08:08:14] 
[2025-11-22 08:08:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-22 08:08:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-22 08:08:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-22 08:08:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-22 08:08:14] 
[2025-11-22 08:08:14] 2025-11-22 07:06:38,941 | INFO     | ***************************************
[2025-11-22 08:08:14] 2025-11-22 07:06:39,445 | INFO     | executing command: df -mP /scratch/boinc/var/slot128/slots/0
[2025-11-22 08:08:14] 2025-11-22 07:06:39,472 | INFO     | sufficient remaining disk space (3283614695424 B)
[2025-11-22 08:08:14] 2025-11-22 07:06:39,472 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-22 08:08:14] 2025-11-22 07:06:39,472 | INFO     | current server update state: UPDATING_FINAL
[2025-11-22 08:08:14] 2025-11-22 07:06:39,472 | INFO     | update_server=False
[2025-11-22 08:08:14] 2025-11-22 07:06:39,472 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-22 08:08:14] 2025-11-22 07:06:39,473 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-22 08:08:14] 2025-11-22 07:06:39,473 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-22 08:08:14] 2025-11-22 07:06:39,473 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-22 08:08:14] 2025-11-22 07:06:39,474 | INFO     | aborting loop
[2025-11-22 08:08:14] 2025-11-22 07:06:39,704 | INFO     | all payload control threads have been joined
[2025-11-22 08:08:14] 2025-11-22 07:06:39,735 | INFO     | all data control threads have been joined
[2025-11-22 08:08:14] 2025-11-22 07:06:39,931 | INFO     | all job control threads have been joined
[2025-11-22 08:08:14] 2025-11-22 07:06:40,477 | INFO     | [job] retrieve thread has finished
[2025-11-22 08:08:14] 2025-11-22 07:06:40,480 | INFO     | [job] job monitor thread has finished
[2025-11-22 08:08:14] 2025-11-22 07:06:40,696 | INFO     | [job] validate thread has finished
[2025-11-22 08:08:14] 2025-11-22 07:06:40,706 | INFO     | [payload] control thread has finished
[2025-11-22 08:08:14] 2025-11-22 07:06:40,708 | INFO     | [payload] execute_payloads thread has finished
[2025-11-22 08:08:14] 2025-11-22 07:06:40,741 | INFO     | [data] control thread has finished
[2025-11-22 08:08:14] 2025-11-22 07:06:40,936 | INFO     | [job] control thread has finished
[2025-11-22 08:08:14] 2025-11-22 07:06:40,968 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-22 08:08:14] 2025-11-22 07:06:41,030 | INFO     | [payload] failed_post thread has finished
[2025-11-22 08:08:14] 2025-11-22 07:06:41,402 | INFO     | [job] create_data_payload thread has finished
[2025-11-22 08:08:14] 2025-11-22 07:06:41,479 | INFO     | [data] copytool_out thread has finished
[2025-11-22 08:08:14] 2025-11-22 07:06:41,601 | INFO     | [data] copytool_in thread has finished
[2025-11-22 08:08:14] 2025-11-22 07:06:41,707 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-22 08:08:14] 2025-11-22 07:06:41,802 | INFO     | [payload] validate_pre thread has finished
[2025-11-22 08:08:14] 2025-11-22 07:06:41,810 | INFO     | [payload] validate_post thread has finished
[2025-11-22 08:08:14] 2025-11-22 07:06:42,708 | INFO     | [job] queue monitor thread has finished
[2025-11-22 08:08:14] 2025-11-22 07:06:43,480 | INFO     | [data] queue_monitor thread has finished
[2025-11-22 08:08:14] 2025-11-22 07:07:10,323 | INFO     | PID=1587065 has CPU usage=5.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-22 08:08:14] 2025-11-22 07:07:10,324 | INFO     | .. there are 7 such processes running
[2025-11-22 08:08:14] 2025-11-22 07:07:10,325 | INFO     | found 0 job(s) in 20 queues
[2025-11-22 08:08:14] 2025-11-22 07:07:10,325 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-22 08:08:14] 2025-11-22 07:07:10,325 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-22 08:08:14] 2025-11-22 07:07:22,414 | INFO     | [monitor] cgroup control has ended
[2025-11-22 08:08:14] 2025-11-22 07:07:23,972 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22754952316736)>', '<ExcThread(monitor, started 22754715731712)>']
[2025-11-22 08:08:14] 2025-11-22 07:07:24,393 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-22 08:08:14] 2025-11-22 07:07:24,393 | INFO     | [monitor] control thread has ended
[2025-11-22 08:08:14] 2025-11-22 07:07:28,997 | INFO     | all workflow threads have been joined
[2025-11-22 08:08:14] 2025-11-22 07:07:28,998 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-22 08:08:14] 2025-11-22 07:07:28,998 | INFO     | traces error code: 0
[2025-11-22 08:08:14] 2025-11-22 07:07:28,998 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-22 08:08:14] 2025-11-22 07:07:29,154 [wrapper] ==== pilot stdout END ====
[2025-11-22 08:08:14] 2025-11-22 07:07:29,158 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-22 08:08:14] 2025-11-22 07:07:29,161 [wrapper] pilotpid: 1587065
[2025-11-22 08:08:14] 2025-11-22 07:07:29,165 [wrapper] Pilot exit status: 0
[2025-11-22 08:08:14] 2025-11-22 07:07:29,179 [wrapper] pandaids: 6893840308
[2025-11-22 08:08:14] 2025-11-22 07:07:29,352 [wrapper] cleanup supervisor_pilot 2931960 1587066
[2025-11-22 08:08:14] 2025-11-22 07:07:29,356 [wrapper] Test setup, not cleaning
[2025-11-22 08:08:14] 2025-11-22 07:07:29,360 [wrapper] apfmon messages muted
[2025-11-22 08:08:14] 2025-11-22 07:07:29,364 [wrapper] ==== wrapper stdout END ====
[2025-11-22 08:08:14] 2025-11-22 07:07:29,368 [wrapper] ==== wrapper stderr END ====
[2025-11-22 08:08:14]  *** Error codes and diagnostics ***
[2025-11-22 08:08:14]     "exeErrorCode": 0,
[2025-11-22 08:08:14]     "exeErrorDiag": "",
[2025-11-22 08:08:14]     "pilotErrorCode": 0,
[2025-11-22 08:08:14]     "pilotErrorDiag": "",
[2025-11-22 08:08:14]  *** Listing of results directory ***
[2025-11-22 08:08:14] total 1329528
[2025-11-22 08:08:14] -rw-r--r-- 1 boinc boinc    576529 Nov 20 11:06 pilot3.tar.gz
[2025-11-22 08:08:14] -rwx------ 1 boinc boinc     36292 Nov 20 11:20 runpilot2-wrapper.sh
[2025-11-22 08:08:14] -rw-r--r-- 1 boinc boinc      5112 Nov 20 11:21 queuedata.json
[2025-11-22 08:08:14] -rw-r--r-- 1 boinc boinc       100 Nov 21 15:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-22 08:08:14] -rwxr-xr-x 1 boinc boinc      7986 Nov 21 15:53 run_atlas
[2025-11-22 08:08:14] -rw-r--r-- 1 boinc boinc       105 Nov 21 15:53 job.xml
[2025-11-22 08:08:14] -rw-r--r-- 1 boinc boinc      6684 Nov 21 15:53 init_data.xml
[2025-11-22 08:08:14] -rw-r--r-- 2 boinc boinc 410973220 Nov 21 15:53 EVNT.47493127._000176.pool.root.1
[2025-11-22 08:08:14] -rw-r--r-- 2 boinc boinc     15847 Nov 21 15:53 start_atlas.sh
[2025-11-22 08:08:14] drwxrwx--x 2 boinc boinc      4096 Nov 21 15:53 shared
[2025-11-22 08:08:14] -rw-r--r-- 2 boinc boinc    590104 Nov 21 15:53 input.tar.gz
[2025-11-22 08:08:14] -rw-r--r-- 1 boinc boinc         0 Nov 21 15:53 boinc_lockfile
[2025-11-22 08:08:14] -rw-r--r-- 1 boinc boinc      2786 Nov 21 15:53 pandaJob.out
[2025-11-22 08:08:14] -rw------- 1 boinc boinc    989817 Nov 21 15:53 agis_schedconf.cvmfs.json
[2025-11-22 08:08:14] drwx------ 5 boinc boinc      4096 Nov 21 15:53 pilot3
[2025-11-22 08:08:14] -rw-r--r-- 1 boinc boinc       531 Nov 22 08:00 boinc_task_state.xml
[2025-11-22 08:08:14] -rw------- 1 boinc boinc 927066500 Nov 22 08:05 HITS.47523449._001754.pool.root.1
[2025-11-22 08:08:14] -rw------- 1 boinc boinc      1040 Nov 22 08:06 memory_monitor_summary.json
[2025-11-22 08:08:14] -rw------- 1 boinc boinc   1526164 Nov 22 08:06 agis_ddmendpoints.agis.ALL.json
[2025-11-22 08:08:14] -rw------- 1 boinc boinc   1699651 Nov 22 08:06 log.47523449._001754.job.log.tgz.1
[2025-11-22 08:08:14] -rw------- 1 boinc boinc      8594 Nov 22 08:06 heartbeat.json
[2025-11-22 08:08:14] -rw------- 1 boinc boinc        95 Nov 22 08:07 pilot_heartbeat.json
[2025-11-22 08:08:14] -rw------- 1 boinc boinc      4835 Nov 22 08:07 pilotlog.txt
[2025-11-22 08:08:14] -rw------- 1 boinc boinc   8034541 Nov 22 08:07 log.47523449._001754.job.log.1
[2025-11-22 08:08:14] -rw------- 1 boinc boinc       353 Nov 22 08:07 output.list
[2025-11-22 08:08:14] -rw-r--r-- 1 boinc boinc       620 Nov 22 08:07 runtime_log
[2025-11-22 08:08:14] -rw------- 1 boinc boinc   9758720 Nov 22 08:07 result.tar.gz
[2025-11-22 08:08:14] -rw-r--r-- 1 boinc boinc      9223 Nov 22 08:07 runtime_log.err
[2025-11-22 08:08:14] -rw------- 1 boinc boinc       670 Nov 22 08:07 SffLDmswGg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmRNHKDmqQvCnn.diag
[2025-11-22 08:08:14] -rw-r--r-- 1 boinc boinc        28 Nov 22 08:08 wrapper_checkpoint.txt
[2025-11-22 08:08:14] -rw-r--r-- 1 boinc boinc      8192 Nov 22 08:08 boinc_mmap_file
[2025-11-22 08:08:14] -rw-r--r-- 1 boinc boinc     21110 Nov 22 08:08 stderr.txt
[2025-11-22 08:08:14] HITS file was successfully produced:
[2025-11-22 08:08:14] -rw------- 1 boinc boinc 927066500 Nov 22 08:05 shared/HITS.pool.root.1
[2025-11-22 08:08:14]  *** Contents of shared directory: ***
[2025-11-22 08:08:14] total 1316820
[2025-11-22 08:08:14] -rw-r--r-- 2 boinc boinc 410973220 Nov 21 15:53 ATLAS.root_0
[2025-11-22 08:08:14] -rw-r--r-- 2 boinc boinc     15847 Nov 21 15:53 start_atlas.sh
[2025-11-22 08:08:14] -rw-r--r-- 2 boinc boinc    590104 Nov 21 15:53 input.tar.gz
[2025-11-22 08:08:14] -rw------- 1 boinc boinc 927066500 Nov 22 08:05 HITS.pool.root.1
[2025-11-22 08:08:14] -rw------- 1 boinc boinc   9758720 Nov 22 08:07 result.tar.gz
08:08:15 (1582981): run_atlas exited; CPU time 233768.826218
08:08:15 (1582981): called boinc_finish(0)

</stderr_txt>
]]>

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